ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf30p05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LOC_Os07g43730:12007.t04017:unspliced-genomic transcription ... 86 6e-29
2LOC_Os06g06270:12006.t00513:unspliced-genomic transcription ... 119 3e-26
3LOC_Os02g04160:12002.t00315:unspliced-genomic transcription ... 90 3e-21
4LOC_Os05g43660:12005.t03856:unspliced-genomic hypothetical p... 35 0.61
5LOC_Os11g27880:12011.t02402:unspliced-genomic retrotransposo... 34 1.2
6LOC_Os05g18970:12005.t01664:unspliced-genomic hypothetical p... 34 1.2
7LOC_Os02g02050:12002.t00105:unspliced-genomic SNF2 family N-... 33 1.8
8LOC_Os03g29850:12003.t02597:unspliced-genomic zinc transport... 33 3.0
9LOC_Os11g37190:12011.t03261:unspliced-genomic expressed protein 28 4.1
10LOC_Os06g20900:12006.t01907:unspliced-genomic expressed protein 32 4.1
11LOC_Os03g13400:12003.t01134:unspliced-genomic zinc finger, C... 32 4.1
12LOC_Os10g35294:12010.t02825:unspliced-genomic fiber protein ... 32 4.1
13LOC_Os09g15810:12009.t01369:unspliced-genomic folD bifunctio... 32 4.1
14LOC_Os10g21784:12010.t003575:unspliced-genomic expressed pro... 25 5.1
15LOC_Os05g42210:12005.t03757:unspliced-genomic serine/threoni... 32 5.6
16LOC_Os01g40580:12001.t03582:unspliced-genomic hypersensitive... 30 6.0
17LOC_Os06g12830:12006.t01159:unspliced-genomic expressed protein 28 6.0
18LOC_Os09g20550:12009.t01789:unspliced-genomic inhibitor of a... 24 6.9
19LOC_Os09g34100:12009.t02986:unspliced-genomic hydroxyacylglu... 31 7.7
20LOC_Os09g14960:12009.t01286:unspliced-genomic transposon pro... 31 7.7
21LOC_Os10g31790:12010.t02502:unspliced-genomic small GTP-bind... 31 7.8
22LOC_Os03g63280:12003.t05545:unspliced-genomic regulatory pro... 31 7.8
23LOC_Os03g21419:12003.t01896:unspliced-genomic retrotransposo... 31 7.8
24LOC_Os02g44910:12002.t04081:unspliced-genomic transmembrane ... 31 7.8
25LOC_Os12g44320:12012.t04098:unspliced-genomic ATP binding pr... 27 10.0

>LOC_Os07g43730:12007.t04017:unspliced-genomic transcription elongation factor 1, putative, expressed|
          Length = 2603
 Score = 64.8 bits (135), Expect(4) = 6e-29
 Identities = 26/44 (59%), Positives = 29/44 (65%)
 Frame = +3 / +2

                                                        
Query: 84   RKTS*TMGXXXXXXXXXXXXXMDKLDTVFSCPFCNHGSSVECRI 215
            +K +* MG             MDKLDTVFSCPFCNHGSSVECR+
Sbjct: 1172 KKVT*AMGKRKSAAKPPPKKRMDKLDTVFSCPFCNHGSSVECRM 1303



 Score = 55.6 bits (115), Expect(4) = 6e-29
 Identities = 20/25 (80%), Positives = 24/25 (96%)
 Frame = +3 / +3

                                     
Query: 216  DMKNLIGEANCRICQESFSTTINAL 290
            DMKNLIGEA+CRICQE+FSTT+N +
Sbjct: 1392 DMKNLIGEASCRICQENFSTTVNGM 1466



 Score = 36.3 bits (73), Expect(4) = 6e-29
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +3 / +2

                          
Query: 309  YSEWIDECERVNAV 350
            YSEWIDECERVN V
Sbjct: 2141 YSEWIDECERVNNV 2182



 Score = 35.0 bits (70), Expect(4) = 6e-29
 Identities = 14/17 (82%), Positives = 16/17 (94%)
 Frame = +3 / +3

                             
Query: 420  ALVLLAATFSHVCSSVV 470
            ALVLL ATFSHVC+SV+
Sbjct: 2235 ALVLLTATFSHVCNSVM 2285



 Score = 85.8 bits (181), Expect(4) = 5e-26
 Identities = 37/43 (86%), Positives = 38/43 (88%)
 Frame = -1 / -3

                                                       
Query: 214  IRHSTLLPWLQNGQEKTVSSLSIRFLGGGLAADFLFPMVQLVF 86
            IRHSTLLP LQNGQE TVSSLSI FLGGGLAADFLFPM Q+ F
Sbjct: 1302 IRHSTLLP*LQNGQENTVSSLSILFLGGGLAADFLFPMAQVTF 1174



 Score = 35.9 bits (72), Expect(4) = 5e-26
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = -1 / -2

                                    
Query: 490  LTVRSASTTLLQTWLKVAANNTNA 419
            L    ++ TLLQTWLKVA N+T+A
Sbjct: 2305 LLTNQSAITLLQTWLKVAVNSTSA 2234



 Score = 33.6 bits (67), Expect(4) = 5e-26
 Identities = 16/22 (72%), Positives = 17/22 (77%)
 Frame = -1 / -2

                                  
Query: 277  VVLKLSWQIRQFASPIRFFISI 212
            VVLK S QI   ASPIRFFIS+
Sbjct: 1453 VVLKFS*QILHEASPIRFFISL 1388



 Score = 26.3 bits (51), Expect(4) = 5e-26
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = -3 / -2

                          
Query: 350  DSVDALALIDPFAV 309
            D VD LALI+PFA+
Sbjct: 2182 DIVDTLALINPFAI 2141



 Score = 59.7 bits (124), Expect(4) = 1e-14
 Identities = 26/44 (59%), Positives = 28/44 (63%)
 Frame = +1 / +3

                                                        
Query: 79   KGEKQVEPWGRESQLLSHPLRSGWTSSTRSFPARSATMGAALNA 210
            +G K +EPW R SQ LSH LR GWTS    FPA SA M   LNA
Sbjct: 1167 EGRK*LEPWERGSQRLSHHLRRGWTSLILYFPAHSAIMAVVLNA 1298



 Score = 29.0 bits (57), Expect(4) = 1e-14
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = +2 / +2

                                 
Query: 215  *YEESDW*GELSNLPGKLQHH 277
            *YEE D  G + +L GKLQHH
Sbjct: 1391 *YEEPDRRGFM*DLSGKLQHH 1453



 Score = 29.0 bits (57), Expect(4) = 1e-14
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +1 / +1

                                      
Query: 385  LPNEMVTTMTVMRWCYWLPPSAMFVV 462
            + N     +  + WCY LPPSA  V+
Sbjct: 2200 MSNAKCLMLPYLHWCY*LPPSATSVI 2277



 Score = 24.4 bits (47), Expect(4) = 1e-14
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = +1 / +3

                          
Query: 313  ANGSMSASASTLSE 354
            ANG MSAS ST+S+
Sbjct: 2145 ANGLMSASVSTMSK 2186



 Score = 54.7 bits (113), Expect(4) = 5e-14
 Identities = 25/50 (50%), Positives = 31/50 (62%)
 Frame = -3 / -2

                                                              
Query: 224  LHINSAFNAAPMVAERAGKDRVELVHPLLRGWXXXXXXLPHGSTCFSPFK 75
            L+ + AFN   M+AE AGK  ++LVHPLLR W      L HGS+ F P K
Sbjct: 1312 LYSHPAFNTTAMIAEWAGKYSIKLVHPLLRWWLSR*LPLSHGSSYFLPSK 1163



 Score = 32.2 bits (64), Expect(4) = 5e-14
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = -3 / -1

                                       
Query: 296  LSQRIYGGAEAFLADSTIRLTNQILHI 216
            L+  I  GAE FL D T  L +Q+LHI
Sbjct: 1472 LTHTIDSGAEVFLTDPT*SLADQVLHI 1392



 Score = 28.1 bits (55), Expect(4) = 5e-14
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = -3 / -1

                            
Query: 470  HDATTNMAEGGSQ*HQ 423
            H   T++AEGGSQ*HQ
Sbjct: 2285 HYTITDVAEGGSQ*HQ 2238



 Score = 24.9 bits (48), Expect(4) = 5e-14
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -1 / -2

                                          
Query: 550  GSNASTQYHRLFIKRRMNCLLTVRSASTTL 461
            GS  +     +++   MNCLLT +SA T L
Sbjct: 2362 GSRYNITSSGVYLGAGMNCLLTNQSAITLL 2273



 Score = 54.2 bits (112), Expect(3) = 6e-12
 Identities = 25/45 (55%), Positives = 28/45 (62%)
 Frame = -2 / -1

                                                         
Query: 210  GIQRCSHGCRTGRKRPCRACPSAS*GVA*QLTFSSPWFNLFFSLQ 76
            GIQ   H CR GRK   +ACPS+S* VA* LT S PW  L  S +
Sbjct: 1298 GIQHYCHDCRMGRKIQYQACPSSS*VVA*PLTSSFPWLKLLSSFK 1164



 Score = 32.2 bits (64), Expect(3) = 6e-12
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -2 / -3

                                     
Query: 285  HLWWC*SFPGRFDNSPHQSDSSYQF 211
            H  WC*SFP R    P +S SSY +
Sbjct: 1461 H*QWC*SFPDRSYMKPRRSGSSYHW 1387



 Score = 27.6 bits (54), Expect(3) = 6e-12
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -2 / -3

                         
Query: 462  YYKHG*RWQPITP 424
            YY+ G*RWQ I P
Sbjct: 2277 YYRRG*RWQSIAP 2239



 Score = 57.9 bits (120), Expect(2) = 2e-09
 Identities = 25/45 (55%), Positives = 36/45 (80%)
 Frame = +2 / +1

                                                         
Query: 80   REKNKLNHGEEKVSC*ATP*EADGQARHGLFLPVLQPWEQR*MPN 214
            +E++ L+HG+E+VS *AT *E DGQA + +FLP+LQ W+  *MP+
Sbjct: 1168 KEESNLSHGKEEVSG*ATT*EEDGQA*YCIFLPILQSWQ*C*MPD 1302



 Score = 27.6 bits (54), Expect(2) = 2e-09
 Identities = 11/15 (73%), Positives = 11/15 (73%)
 Frame = +2 / +2

                           
Query: 419  CVGVIGCHLQPCL** 463
            C G I CHLQP L**
Sbjct: 2234 CTGAIDCHLQPRL** 2278



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>LOC_Os06g06270:12006.t00513:unspliced-genomic transcription elongation factor 1, putative|
          Length = 327

 Score =  119 bits (254), Expect = 3e-26
 Identities = 42/65 (64%), Positives = 54/65 (83%)
 Frame = +3 / +1

                                                                       
Query: 153 KLDTVFSCPFCNHGSSVECRIDMKNLIGEANCRICQESFSTTINALTEPIDIYSEWIDEC 332
           KL+T FSCPFC+HG +VEC ID+K++I EA+C +CQ  +STT +ALTEPID+YSEWID+C
Sbjct: 61  KLETAFSCPFCDHGGAVECSIDIKHMIAEASCFVCQARYSTTAHALTEPIDVYSEWIDQC 240

                
Query: 333 ERVNA 347
           E   A
Sbjct: 241 ELAKA 255



 Score = 61.6 bits (128), Expect = 6e-09
 Identities = 29/67 (43%), Positives = 44/67 (65%)
 Frame = -3 / -1

                                                                       
Query: 335 LALIDPFAVYINRLSQRIYGGAEAFLADSTIRLTNQILHINSAFNAAPMVAERAGKDRVE 156
           LAL+DP AV ++ L +R+ GG  A LAD    L + +L +++A + A +VAERA + R++
Sbjct: 243 LALVDPLAVDVDGLGERVGGGGVARLADEAGGLGDHVLDVDAALHRAAVVAERAAERRLQ 64

                  
Query: 155 LVHPLLR 135
           L   LLR
Sbjct: 63  LRRRLLR 43



 Score = 51.9 bits (107), Expect = 5e-06
 Identities = 25/51 (49%), Positives = 30/51 (58%)
 Frame = -1 / -2

                                                              
Query: 292 VSAFMVVLKLSWQIRQFASPIRFFISIRHSTLLPWLQNGQEKTVSSLSIRF 140
           VSA+ VV   +WQ +Q AS I   +S+ HST  PW QNGQ   VSS    F
Sbjct: 200 VSAWAVVE*RAWQTKQEASAIMCLMSMLHSTAPPWSQNGQLNAVSSFGAAF 48



 Score = 34.5 bits (69), Expect = 0.84
 Identities = 20/58 (34%), Positives = 30/58 (51%)
 Frame = +2 / +3

                                                                     
Query: 140 EADGQARHGLFLPVLQPWEQR*MPN*YEESDW*GELSNLPGKLQHHHKCAD*AY*YIQ 313
           E   +A  G+ LPVL+P  +  + + ++  D  G L  LPG L HH   A  A+  +Q
Sbjct: 48  EGGAEAGDGVQLPVLRPRRRGGVQHRHQAHDRRGLLLRLPGALLHHRPRAHRAHRRLQ 221



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>LOC_Os02g04160:12002.t00315:unspliced-genomic transcription elongation factor 1, putative, expressed|
          Length = 2805

 Score = 61.1 bits (127), Expect(3) = 3e-21
 Identities = 25/45 (55%), Positives = 27/45 (60%)
 Frame = +3 / +3

                                                         
Query: 81   GRKTS*TMGXXXXXXXXXXXXXMDKLDTVFSCPFCNHGSSVECRI 215
            G+   * MG             MDKLDTVF CPFCNHGSSVECR+
Sbjct: 1011 GKNKR*IMGKRKSKAKPPPKKRMDKLDTVFCCPFCNHGSSVECRM 1145



 Score = 49.6 bits (102), Expect(3) = 3e-21
 Identities = 18/25 (72%), Positives = 23/25 (92%)
 Frame = +3 / +1

                                     
Query: 210  RIDMKNLIGEANCRICQESFSTTIN 284
            R D+KNLIGEA+CRIC E+FST++N
Sbjct: 1249 RSDLKNLIGEASCRICLETFSTSVN 1323



 Score = 35.4 bits (71), Expect(3) = 3e-21
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = +3 / +1

                        
Query: 309  YSEWIDECERVN 344
            YSEWIDECERVN
Sbjct: 2194 YSEWIDECERVN 2229



 Score = 90.0 bits (190), Expect(2) = 4e-21
 Identities = 36/49 (73%), Positives = 41/49 (83%)
 Frame = -1 / -3

                                                             
Query: 214  IRHSTLLPWLQNGQEKTVSSLSIRFLGGGLAADFLFPMVQLVFLPSKSR 68
            +RHSTLLPWLQNGQ+KTVSSLSI FLGGG A DFL PM+Q +F P  +R
Sbjct: 1144 MRHSTLLPWLQNGQQKTVSSLSILFLGGGFALDFLLPMIQRLFFPPFAR 998



 Score = 31.3 bits (62), Expect(2) = 4e-21
 Identities = 14/24 (58%), Positives = 19/24 (79%)
 Frame = -1 / -2

                                    
Query: 274  VLKLSWQIRQFASPIRFFISIRHS 203
            VLK+S QI   ASPI+FF S+R++
Sbjct: 1313 VLKVSKQILHEASPIKFFRSLRNT 1242



 Score = 40.5 bits (82), Expect = 0.014
 Identities = 19/37 (51%), Positives = 24/37 (64%)
 Frame = +2 / +2

                                                 
Query: 80   REKNKLNHGEEKVSC*ATP*EADGQARHGLFLPVLQP 190
            REK  LNHG+E+V    T  E +GQA + L L +LQP
Sbjct: 1010 REK*ALNHGQEEVQSKTTSQEENGQA*YCLLLSILQP 1120



 Score = 34.5 bits (69), Expect(2) = 0.21
 Identities = 17/41 (41%), Positives = 21/41 (51%)
 Frame = -2 / -1

                                                     
Query: 204  QRCSHGCRTGRKRPCRACPSAS*GVA*QLTFSSPWFNLFFS 82
            Q    GC+   KR  +ACP +S  V    T S P FN +FS
Sbjct: 1134 QHYFRGCKMDSKRQYQACPFSSWEVVLLWTSSCP*FNAYFS 1012



 Score = 23.5 bits (45), Expect(2) = 0.21
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -3 / -1

                        
Query: 344  VDALALIDPFAV 309
            V ALA +DPFAV
Sbjct: 2229 VHALAFVDPFAV 2194



 Score = 31.8 bits (63), Expect = 5.6
 Identities = 16/42 (38%), Positives = 19/42 (45%)
 Frame = +1 / +1

                                                      
Query: 82   GEKQVEPWGRESQLLSHPLRSGWTSSTRSFPARSATMGAALN 207
            G+  VE W R S   +H  R  WTS   SF    AT    L+
Sbjct: 1012 GKISVESWARGSPKQNHLPRREWTSLILSFAVHFATTEVVLS 1137



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>LOC_Os05g43660:12005.t03856:unspliced-genomic hypothetical protein|
          Length = 363

 Score = 35.0 bits (70), Expect = 0.61
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -2 / +2

                               
Query: 198 CSHGCRTGRKRPCRACPSAS 139
           C+   R GR+RPCR CP A+
Sbjct: 164 CAAAARPGRRRPCRRCPCAT 223



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>LOC_Os11g27880:12011.t02402:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 1882

 Score = 34.1 bits (68), Expect = 1.2
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -3 / -1

                                             
Query: 614  PYTI*WIHSSIHTGHARLLVLRFKRKYTISSLV 516
            P+ +   H S+HT  +R L  RF+RKY  S+ V
Sbjct: 1063 PHVLLPCHQSLHTSRSRSLNTRFRRKYKFSNPV 965



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>LOC_Os05g18970:12005.t01664:unspliced-genomic hypothetical protein|
          Length = 2576

 Score = 34.1 bits (68), Expect = 1.2
 Identities = 14/18 (77%), Positives = 14/18 (77%)
 Frame = +3 / -2

                             
Query: 18  LPSGVSPNRPSSSDPTPR 71
           LPS VSP RPSSS P PR
Sbjct: 541 LPSSVSPPRPSSSRPLPR 488



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>LOC_Os02g02050:12002.t00105:unspliced-genomic SNF2 family N-terminal domain containing protein, expressed|
          Length = 16644

 Score = 32.7 bits (65), Expect(2) = 1.8
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = +1 / +1

                                                            
Query: 328  SASASTLSEMMMMIHEHVPLPNEMVTTMTVMRWCYWLPPSAMFVVASC 471
            SA A  L  +++M   H  + N     + ++ WC+W P S      +C
Sbjct: 6904 SAFAGKLL*LIIMKTLHSNILNNSRKFLLILEWCFWAPQSRFLSTLAC 7047



 Score = 24.4 bits (47), Expect(2) = 1.8
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = +3 / +2

                               
Query: 564   SCMSGVYGTMDPSDCVRF 617
             SC++GVYG+ +P   +++
Sbjct: 13028 SCLAGVYGS*NPD*SIKY 13081



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>LOC_Os03g29850:12003.t02597:unspliced-genomic zinc transporter 2 precursor, putative, expressed|
          Length = 3309

 Score = 32.7 bits (65), Expect = 3.0
 Identities = 13/21 (61%), Positives = 13/21 (61%)
 Frame = -2 / +2

                                 
Query: 201  RCSHGCRTGRKRPCRACPSAS 139
            RCS  CRTGR  P  A PS S
Sbjct: 2711 RCSGCCRTGRSSPASATPSPS 2773



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>LOC_Os11g37190:12011.t03261:unspliced-genomic expressed protein|
          Length = 2775

 Score = 28.1 bits (55), Expect(2) = 4.1
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +3 / -2

                                            
Query: 381  PASKRDGYYYDCNALVLLAATFSHVCSSVVLA 476
            P +K D  YY   ++VL    ++  CS++V A
Sbjct: 1226 PCTKADVVYYISRSIVLYIIFWTRACSAIVWA 1131



 Score = 25.4 bits (49), Expect(2) = 4.1
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2 / -1

                                
Query: 530 LCTCV*TLILVVLHVRCVWNY 592
           +C CV   I + LH+  VW Y
Sbjct: 990 VCVCVKKQINIGLHLENVWRY 928



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>LOC_Os06g20900:12006.t01907:unspliced-genomic expressed protein|
          Length = 3125

 Score = 32.2 bits (64), Expect = 4.1
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +3 / -1

                                        
Query: 609  VRFVLYQYVIMVEIRTNFSTREELILML 692
            +RFVL+ YV+M ++R NF   E  I ++
Sbjct: 1751 IRFVLFSYVLMCKLRLNFDFVETYIYIV 1668



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>LOC_Os03g13400:12003.t01134:unspliced-genomic zinc finger, C2H2 type family protein, expressed|
          Length = 4103

 Score = 32.2 bits (64), Expect = 4.1
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +3 / +1

                                         
Query: 9    SSFLPSGVSPNRPSSSDPTPRDFEGRKTS 95
            S   P   SP RP+++ P PR  EGR++S
Sbjct: 3703 SQSAPPPSSPRRPAAAAPAPRRQEGRRSS 3789



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>LOC_Os10g35294:12010.t02825:unspliced-genomic fiber protein Fb34, putative, expressed|
          Length = 3201

 Score = 32.2 bits (64), Expect = 4.1
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +2 / +3

                                       
Query: 551  LILVVLHVRCVWNYGSIRLCKVCSLPV 631
            ++L +LH +C W+ G+   C++  LPV
Sbjct: 2982 ILLGLLHTKCCWSVGAEDFCQLFCLPV 3062



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>LOC_Os09g15810:12009.t01369:unspliced-genomic folD bifunctional protein, putative, expressed|
          Length = 2795

 Score = 32.2 bits (64), Expect = 4.1
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +1 / +1

                                         
Query: 100 PWGRESQLLSHPLRSGWTSSTRSFPARSAT 189
           PW     L   PLR+ W SS+ + PAR +T
Sbjct: 88  PWPCSRPLAGAPLRARWRSSSLARPARGST 177



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>LOC_Os10g21784:12010.t003575:unspliced-genomic expressed protein|
          Length = 4441

 Score = 24.9 bits (48), Expect(2) = 5.1
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -2 / -3

                                          
Query: 276 WC*SFPGRFDNSPHQSDSSYQFGIQRCSHGC 184
           +C S P  F +S H+S +S +   +  S GC
Sbjct: 803 YCDSIPIHFSHSGHRSSASGESEQRMFSGGC 711



 Score = 24.0 bits (46), Expect(2) = 5.1
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2 / -1

                       
Query: 183 RTGRKRPCRACP 148
           R G++R CR CP
Sbjct: 613 RPGQRRRCRGCP 578



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>LOC_Os05g42210:12005.t03757:unspliced-genomic serine/threonine-protein kinase receptor precursor, putative,|
            expressed
          Length = 5855

 Score = 31.8 bits (63), Expect = 5.6
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = +3 / -3

                             
Query: 177  PFCNHGSSVECRIDMKN 227
            P CNHGS   CR D KN
Sbjct: 1416 PVCNHGSRNNCRKDQKN 1366



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>LOC_Os01g40580:12001.t03582:unspliced-genomic hypersensitive-induced response protein, putative, expressed|
          Length = 1592

 Score = 29.9 bits (59), Expect(2) = 6.0
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +3 / +3

                                
Query: 6   PSSFLPSGVSPNRPSSSDPTP 68
           PSS  PS   P  PS++ PTP
Sbjct: 396 PSSTAPSPTGPTTPSTASPTP 458



 Score = 22.1 bits (42), Expect(2) = 6.0
 Identities = 9/31 (29%), Positives = 13/31 (41%)
 Frame = +3 / +2

                                          
Query: 444 FSHVCSSVVLADRTVSRQFILRLINKR*YCV 536
           F  +C SV      +  QF   + N   YC+
Sbjct: 593 FPQMCGSVTSVFEVIILQFFPAIFNGTSYCL 685



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>LOC_Os06g12830:12006.t01159:unspliced-genomic expressed protein|
          Length = 2228

 Score = 27.6 bits (54), Expect(2) = 6.0
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -1 / -2

                                
Query: 67  GVGSDEEGRLGETPEGRKEEG 5
           G G D+E R GE  EG+ E+G
Sbjct: 220 GGGGDDERRGGEVDEGQGEDG 158



 Score = 24.9 bits (48), Expect(2) = 6.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2 / -1

                           
Query: 189  GCRTGRKRPCRACPS 145
            G RTGR   C +CP+
Sbjct: 1316 GTRTGRSSRCGSCPA 1272



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>LOC_Os09g20550:12009.t01789:unspliced-genomic inhibitor of apoptosis, putative, expressed|
          Length = 4788

 Score = 24.4 bits (47), Expect(2) = 6.9
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +1 / +2

                                                 
Query: 100  PWGRESQLLSHPLRSGWTSSTRSFPARSATMGAALNA 210
            P GR+S   +   R   TSS +  P R A  G A +A
Sbjct: 4169 PRGRQSSPPTKGHRPRRTSSRKRLPRRQAVAGTA*SA 4279



 Score = 24.0 bits (46), Expect(2) = 6.9
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +2 / +2

                      
Query: 32   FPQPTLLVRP 61
            FPQPTLLV P
Sbjct: 4130 FPQPTLLVWP 4159



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>LOC_Os09g34100:12009.t02986:unspliced-genomic hydroxyacylglutathione hydrolase 2, mitochondrial precursor,|
            putative, expressed
          Length = 5070

 Score = 31.3 bits (62), Expect = 7.7
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +3 / +2

                                  
Query: 402  YYYDCNALVLLAATFSHVCSSV 467
            YY  CN L+++    +HVCSSV
Sbjct: 953  YYCYCNQLIVMILRAAHVCSSV 1018



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>LOC_Os09g14960:12009.t01286:unspliced-genomic transposon protein, putative, Pong sub-class, expressed|
          Length = 4582

 Score = 31.3 bits (62), Expect = 7.7
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +3 / +3

                                      
Query: 6    PSSFLPSGVSPNRPSSSDPTPRDFEG 83
            PS+FLP+ V P++  S   TPR   G
Sbjct: 2685 PSTFLPAPVIPSKAPSDQGTPRSITG 2762



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>LOC_Os10g31790:12010.t02502:unspliced-genomic small GTP-binding protein domain, putative, expressed|
          Length = 7651

 Score = 31.3 bits (62), Expect = 7.8
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = -1 / +1

                                        
Query: 85   LPSKSRGVGSDEEGRLGETPEGRKEEGN 2
            L S S  +  +EEG++ E  EG+++EG+
Sbjct: 2374 LVSSSSAISKEEEGQIQEEEEGKRKEGS 2457



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>LOC_Os03g63280:12003.t05545:unspliced-genomic regulatory protein, putative, expressed|
          Length = 2164

 Score = 31.3 bits (62), Expect = 7.8
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -2 / -1

                                      
Query: 225  SSYQFGIQRCSHGCRTGRKRPCRACP 148
            SS++   + CS  CR+ R R CR CP
Sbjct: 1723 SSWRAWCRSCSDPCRSCRIRRCRPCP 1646



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>LOC_Os03g21419:12003.t01896:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass|
          Length = 6073

 Score = 31.3 bits (62), Expect = 7.8
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -2 / -1

                              
Query: 198 CSHGCRTGRKRPCRACPSA 142
           C  GCR GRK   R CP++
Sbjct: 190 CRRGCRRGRKGAARRCPAS 134



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>LOC_Os02g44910:12002.t04081:unspliced-genomic transmembrane protein 34, putative, expressed|
          Length = 4859

 Score = 31.3 bits (62), Expect = 7.8
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +2 / +3

                                  
Query: 584  WNYGSIRLCKVCSLPVCYHG*D 649
            WNY SIRLCK     +C + *D
Sbjct: 1947 WNYCSIRLCKGIHHSICLNS*D 2012



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>LOC_Os12g44320:12012.t04098:unspliced-genomic ATP binding protein, putative, expressed|
          Length = 2833

 Score = 27.2 bits (53), Expect(2) = 10.0
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1 / +2

                                        
Query: 106  GRESQLLSHPLRSGWTSSTRSFPARSAT 189
            GR     +   R+GW + T + PARS+T
Sbjct: 1952 GRSGWACAWARRAGWRTCTPAAPARSST 2035



 Score = 24.9 bits (48), Expect(2) = 10.0
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +3 / +2

                                 
Query: 6   PSSFLPSGVSPNRPSSSDPTPR 71
           PS    S    + PSS+ PTPR
Sbjct: 413 PSPLSASSTPASSPSSTPPTPR 478


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 267,164,648
Number of extensions: 3981015
Number of successful extensions: 19548
Number of sequences better than 10.0: 25
Length of query: 245
Length of database: 55,613,886
Length adjustment: 49
Effective length of query: 196
Effective length of database: 52,856,264
Effective search space: 10359827744
Effective search space used: 10359827744
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
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