ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf33l21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_001057696.1| Oryza sativa (japonica cultivar-group) Os03g... 109 8e-20
2dbj|AK104942.1| Oryza sativa (japonica cultivar-group) cDNA clon... 109 8e-20
3dbj|AK067912.1| Oryza sativa (japonica cultivar-group) cDNA clon... 109 8e-20
4ref|NM_001054313.1| Oryza sativa (japonica cultivar-group) Os02g... 92 2e-14
5dbj|AK064814.1| Oryza sativa (japonica cultivar-group) cDNA clon... 92 2e-14
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 80 7e-11
7gb|AC120983.6| Oryza sativa chromosome 3 BAC OSJNBb0011H13 genom... 80 7e-11
8dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 68 3e-07
9dbj|AP004096.3| Oryza sativa (japonica cultivar-group) genomic D... 68 3e-07
10emb|CT829103.1| Oryza sativa (indica cultivar-group) cDNA clone:... 66 1e-06
11dbj|AK241620.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 58 3e-04
12ref|NM_001074320.1| Oryza sativa (japonica cultivar-group) Os11g... 58 3e-04
13dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 54 0.004
14dbj|AP005492.3| Oryza sativa (japonica cultivar-group) genomic D... 54 0.004
15dbj|AP005468.2| Oryza sativa (japonica cultivar-group) genomic D... 54 0.004
16ref|NM_001057697.1| Oryza sativa (japonica cultivar-group) Os03g... 52 0.015
17dbj|AK066640.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.015
18dbj|AK066477.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.015
19dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.061
20emb|AL772426.5|CNS08CA4 Oryza sativa chromosome 12, . BAC OJ1310... 50 0.061
21gb|AC120536.5| Oryza sativa (japonica cultivar-group) chromosome... 48 0.24
22gb|AC136191.5| Rattus norvegicus BAC CH230-52I17 (Children's Ho... 48 0.24
23dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.24
24gb|AC134428.3| Mus musculus BAC clone RP24-330C24 from 10, compl... 48 0.24
25gb|AC112001.6| Rattus norvegicus 2 BAC CH230-54E3 (Children's Ho... 46 0.95
26emb|AL645617.9| Human DNA sequence from clone RP11-796C22 on chr... 46 0.95
27emb|AL445988.8| Human DNA sequence from clone RP11-625P7 on chro... 46 0.95
28gb|AC151739.15| Medicago truncatula clone mth2-49e16, complete s... 46 0.95
29gb|AC025858.14| Homo sapiens chromosome 17, clone RP11-700K10, c... 46 0.95
30ref|NM_001058700.1| Oryza sativa (japonica cultivar-group) Os04g... 44 3.8
31ref|NW_001091929.1| Theileria annulata strain Ankara clone C9 44 3.8
32gb|AC184826.9| Canis Familiaris chromosome 25, clone XX-19M5, co... 44 3.8
33gb|AC147350.2| Xenopus tropicalis clone CH216-142P22, complete s... 44 3.8
34gb|AC136471.1| Solanum demissum chromosome 11 clone PGEC561, com... 44 3.8
35gb|AC024214.1| Caenorhabditis elegans cosmid Y77E11A, complete s... 44 3.8
36gb|AC147677.4| Canis Familiaris, clone XX-25A1, complete sequence 44 3.8
37gb|AC127250.3| Mus musculus BAC clone RP24-482H23 from chromosom... 44 3.8
38gb|AC117190.3| Mus musculus BAC clone RP23-55A21 from 2, complet... 44 3.8
39emb|CR759910.13| Zebrafish DNA sequence from clone DKEYP-79C4 in... 44 3.8
40gb|AC154492.2| Mus musculus BAC clone RP24-107B10 from chromosom... 44 3.8
41ref|NR_001458.1| Homo sapiens BIC transcript (BIC) on chromosome 21 44 3.8
42emb|BX927107.9| Zebrafish DNA sequence from clone CH211-281H20 i... 44 3.8
43gb|AC108162.4| Homo sapiens BAC clone RP11-686G17 from 4, comple... 44 3.8
44dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 3.8
45gb|AC083829.5| Homo sapiens BAC clone RP11-466G12 from 4, comple... 44 3.8
46emb|AL512843.4| Human DNA sequence from clone RP11-184O20 on chr... 44 3.8
47emb|AL606993.2|OSJN00121 Oryza sativa genomic DNA, chromosome 4,... 44 3.8
48emb|BX649311.10| Zebrafish DNA sequence from clone DKEY-63I8 in ... 44 3.8
49dbj|BS000105.1| Pan troglodytes chromosome 22 clone:RP43-117B17,... 44 3.8
50gb|AC007238.3| Homo sapiens BAC clone RP11-19M18 from 2, complet... 44 3.8
51gb|AC024902.54| Homo sapiens 12 BAC RP11-684O24 (Roswell Park Ca... 44 3.8
52gb|AC010127.12| Homo sapiens BAC clone RP11-2I8 from 2, complete... 44 3.8
53emb|BX323808.7| Zebrafish DNA sequence from clone DKEY-117N4, co... 44 3.8
54gb|AC024873.1|AC024873 Caenorhabditis elegans clone Y77E11A, com... 44 3.8
55dbj|AP001693.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 44 3.8
56gb|AY112148.1| Zea mays CL62029_1 mRNA sequence 44 3.8
57gb|AC163671.5| Mus musculus BAC clone RP23-21K2 from chromosome ... 44 3.8
58ref|XM_736658.1| Plasmodium chabaudi chabaudi hypothetical prote... 44 3.8
59emb|AL672025.8| Mouse DNA sequence from clone RP23-322K17 on chr... 44 3.8
60emb|AL929043.7| Mouse DNA sequence from clone RP23-58H6 on chrom... 44 3.8
61gb|L33096.1|HIVJAE Human immunodeficiency virus type 2 (clone 12... 44 3.8
62dbj|AP000223.1| Homo sapiens genomic DNA, chromosome 21q21.2, LL... 44 3.8
63dbj|AP000137.1| Homo sapiens genomic DNA, chromosome 21q21.2, LL... 44 3.8
64dbj|AP000085.1| Homo sapiens genomic DNA of 21q22.1, APP related... 44 3.8 
>ref|NM_001057696.1| Oryza sativa (japonica cultivar-group) Os03g0730400 (Os03g0730400)
           mRNA, complete cds
          Length = 1674
 Score =  109 bits (55), Expect = 8e-20
 Identities = 109/127 (85%)
 Strand = Plus / Plus

                                                                       
Query: 85  cgtcggtggtgacccatctcccgggcttccatggccgccttccgttccacctggagaccg 144
           |||||||| | ||||| |||||||||||||| |||||| | ||||||||||| |||||||
Sbjct: 232 cgtcggtgatcacccacctcccgggcttccacggccgcttgccgttccaccttgagaccg 291

                                                                       
Query: 145 ggtacatcagcgtggacgaggagacgggagcggagctcttctactacttcgtggagtcag 204
           ||||  |  | |||||||||||||||||  | |||||||||||||||||||| || || |
Sbjct: 292 ggtatgttggtgtggacgaggagacgggcactgagctcttctactacttcgttgaatcgg 351

                  
Query: 205 agaggag 211
           |||||||
Sbjct: 352 agaggag 358



 Score = 50.1 bits (25), Expect = 0.061
 Identities = 58/69 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1113 cctatgaaatttgtgctggcaccttataatggtagtttgccacagttggcctataatcca 1172
            ||||||||||  ||| |||  ||||||||||||||||||||||  ||||  |||||||  
Sbjct: 441  cctatgaaatacgtgttggagccttataatggtagtttgccacgattggtttataatcag 500

                     
Query: 1173 tattcatgg 1181
            |||||||||
Sbjct: 501  tattcatgg 509
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>dbj|AK104942.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-A07, full
           insert sequence
          Length = 510

 Score =  109 bits (55), Expect = 8e-20
 Identities = 109/127 (85%)
 Strand = Plus / Plus

                                                                       
Query: 85  cgtcggtggtgacccatctcccgggcttccatggccgccttccgttccacctggagaccg 144
           |||||||| | ||||| |||||||||||||| |||||| | ||||||||||| |||||||
Sbjct: 200 cgtcggtgatcacccacctcccgggcttccacggccgcttgccgttccaccttgagaccg 259

                                                                       
Query: 145 ggtacatcagcgtggacgaggagacgggagcggagctcttctactacttcgtggagtcag 204
           ||||  |  | |||||||||||||||||  | |||||||||||||||||||| || || |
Sbjct: 260 ggtatgttggtgtggacgaggagacgggcactgagctcttctactacttcgttgaatcgg 319

                  
Query: 205 agaggag 211
           |||||||
Sbjct: 320 agaggag 326
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>dbj|AK067912.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128F10, full
           insert sequence
          Length = 1677

 Score =  109 bits (55), Expect = 8e-20
 Identities = 109/127 (85%)
 Strand = Plus / Plus

                                                                       
Query: 85  cgtcggtggtgacccatctcccgggcttccatggccgccttccgttccacctggagaccg 144
           |||||||| | ||||| |||||||||||||| |||||| | ||||||||||| |||||||
Sbjct: 235 cgtcggtgatcacccacctcccgggcttccacggccgcttgccgttccaccttgagaccg 294

                                                                       
Query: 145 ggtacatcagcgtggacgaggagacgggagcggagctcttctactacttcgtggagtcag 204
           ||||  |  | |||||||||||||||||  | |||||||||||||||||||| || || |
Sbjct: 295 ggtatgttggtgtggacgaggagacgggcactgagctcttctactacttcgttgaatcgg 354

                  
Query: 205 agaggag 211
           |||||||
Sbjct: 355 agaggag 361



 Score = 50.1 bits (25), Expect = 0.061
 Identities = 58/69 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1113 cctatgaaatttgtgctggcaccttataatggtagtttgccacagttggcctataatcca 1172
            ||||||||||  ||| |||  ||||||||||||||||||||||  ||||  |||||||  
Sbjct: 444  cctatgaaatacgtgttggagccttataatggtagtttgccacgattggtttataatcag 503

                     
Query: 1173 tattcatgg 1181
            |||||||||
Sbjct: 504  tattcatgg 512
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>ref|NM_001054313.1| Oryza sativa (japonica cultivar-group) Os02g0687900 (Os02g0687900)
           mRNA, complete cds
          Length = 1671

 Score = 91.7 bits (46), Expect = 2e-14
 Identities = 109/130 (83%)
 Strand = Plus / Plus

                                                                       
Query: 82  cggcgtcggtggtgacccatctcccgggcttccatggccgccttccgttccacctggaga 141
           ||||| ||||||| ||||| || ||||| ||| |||| |  || || ||| |||||||||
Sbjct: 164 cggcgacggtggtcacccacctgccgggattcgatggtcctctacccttctacctggaga 223

                                                                       
Query: 142 ccgggtacatcagcgtggacgaggagacgggagcggagctcttctactacttcgtggagt 201
           |||||||| |  ||||||| |||||||| ||  |||||||||||||||||||||||||||
Sbjct: 224 ccgggtacgtgggcgtggaggaggagaccgggacggagctcttctactacttcgtggagt 283

                     
Query: 202 cagagaggag 211
           | ||| ||||
Sbjct: 284 cggagcggag 293
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>dbj|AK064814.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000E09, full
           insert sequence
          Length = 1673

 Score = 91.7 bits (46), Expect = 2e-14
 Identities = 109/130 (83%)
 Strand = Plus / Plus

                                                                       
Query: 82  cggcgtcggtggtgacccatctcccgggcttccatggccgccttccgttccacctggaga 141
           ||||| ||||||| ||||| || ||||| ||| |||| |  || || ||| |||||||||
Sbjct: 165 cggcgacggtggtcacccacctgccgggattcgatggtcctctacccttctacctggaga 224

                                                                       
Query: 142 ccgggtacatcagcgtggacgaggagacgggagcggagctcttctactacttcgtggagt 201
           |||||||| |  ||||||| |||||||| ||  |||||||||||||||||||||||||||
Sbjct: 225 ccgggtacgtgggcgtggaggaggagaccgggacggagctcttctactacttcgtggagt 284

                     
Query: 202 cagagaggag 211
           | ||| ||||
Sbjct: 285 cggagcggag 294
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score = 79.8 bits (40), Expect = 7e-11
 Identities = 73/84 (86%)
 Strand = Plus / Plus

                                                                            
Query: 1108     caggtcctatgaaatttgtgctggcaccttataatggtagtttgccacagttggcctata 1167
                ||||||||||||| || |||||||| ||||||||||||||||||||||  ||||   |||
Sbjct: 29683414 caggtcctatgaatttcgtgctggcgccttataatggtagtttgccacgattggttaata 29683473

                                        
Query: 1168     atccatattcatggtccaaggtga 1191
                ||| |||||||||| | |||||||
Sbjct: 29683474 atcaatattcatggacaaaggtga 29683497



 Score = 71.9 bits (36), Expect = 2e-08
 Identities = 57/64 (89%)
 Strand = Plus / Plus

                                                                            
Query: 85       cgtcggtggtgacccatctcccgggcttccatggccgccttccgttccacctggagaccg 144
                |||||||| | ||||| |||||||||||||| |||||| | ||||||||||| |||||||
Sbjct: 29658250 cgtcggtgatcacccacctcccgggcttccacggccgcttgccgttccaccttgagaccg 29658309

                    
Query: 145      ggta 148
                ||||
Sbjct: 29658310 ggta 29658313



 Score = 63.9 bits (32), Expect = 4e-06
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                        
Query: 156      gtggacgaggagacgggagcggagctcttctactacttcgtggagtcagagaggag 211
                |||||||||||||||||  | |||||||||||||||||||| || || ||||||||
Sbjct: 29659541 gtggacgaggagacgggcactgagctcttctactacttcgttgaatcggagaggag 29659596



 Score = 56.0 bits (28), Expect = 0.001
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                                
Query: 1107     acaggtcctatgaaatttgtgctggcaccttataatggtagtttgcca 1154
                ||||||||| |||| |||||| ||| | ||||||||||||||||||||
Sbjct: 29671165 acaggtcctttgaattttgtgttggaagcttataatggtagtttgcca 29671212



 Score = 54.0 bits (27), Expect = 0.004
 Identities = 63/75 (84%)
 Strand = Plus / Plus

                                                                            
Query: 1107     acaggtcctatgaaatttgtgctggcaccttataatggtagtttgccacagttggcctat 1166
                ||||| ||||||||||  ||| |||  ||||||||||||||||||||||  ||||  |||
Sbjct: 29660522 acaggacctatgaaatacgtgttggagccttataatggtagtttgccacgattggtttat 29660581

                               
Query: 1167     aatccatattcatgg 1181
                ||||  |||||||||
Sbjct: 29660582 aatcagtattcatgg 29660596



 Score = 52.0 bits (26), Expect = 0.015
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                                  
Query: 177      gagctcttctactacttcgtggagtcagagaggaggccggacacggaccc 226
                |||||||||||||||||||| || ||||||| ||  || |||||||||||
Sbjct: 29670887 gagctcttctactacttcgttgaatcagagacgaaccctgacacggaccc 29670936



 Score = 48.1 bits (24), Expect = 0.24
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                            
Query: 85       cgtcggtggtgacccatctcccgggcttccatggccgccttccgttccacctggagaccg 144
                |||||||| | ||||| |||||||||||||| |||||| | | |||| |||| ||||| |
Sbjct: 29680166 cgtcggtgatcacccacctcccgggcttccacggccgcttgcggttctaccttgagactg 29680225

                    
Query: 145      ggta 148
                ||||
Sbjct: 29680226 ggta 29680229
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>gb|AC120983.6| Oryza sativa chromosome 3 BAC OSJNBb0011H13 genomic sequence, complete
              sequence
          Length = 132782

 Score = 79.8 bits (40), Expect = 7e-11
 Identities = 73/84 (86%)
 Strand = Plus / Plus

                                                                          
Query: 1108   caggtcctatgaaatttgtgctggcaccttataatggtagtttgccacagttggcctata 1167
              ||||||||||||| || |||||||| ||||||||||||||||||||||  ||||   |||
Sbjct: 114622 caggtcctatgaatttcgtgctggcgccttataatggtagtttgccacgattggttaata 114681

                                      
Query: 1168   atccatattcatggtccaaggtga 1191
              ||| |||||||||| | |||||||
Sbjct: 114682 atcaatattcatggacaaaggtga 114705



 Score = 71.9 bits (36), Expect = 2e-08
 Identities = 57/64 (89%)
 Strand = Plus / Plus

                                                                         
Query: 85    cgtcggtggtgacccatctcccgggcttccatggccgccttccgttccacctggagaccg 144
             |||||||| | ||||| |||||||||||||| |||||| | ||||||||||| |||||||
Sbjct: 89458 cgtcggtgatcacccacctcccgggcttccacggccgcttgccgttccaccttgagaccg 89517

                 
Query: 145   ggta 148
             ||||
Sbjct: 89518 ggta 89521



 Score = 63.9 bits (32), Expect = 4e-06
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                     
Query: 156   gtggacgaggagacgggagcggagctcttctactacttcgtggagtcagagaggag 211
             |||||||||||||||||  | |||||||||||||||||||| || || ||||||||
Sbjct: 90749 gtggacgaggagacgggcactgagctcttctactacttcgttgaatcggagaggag 90804



 Score = 56.0 bits (28), Expect = 0.001
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                              
Query: 1107   acaggtcctatgaaatttgtgctggcaccttataatggtagtttgcca 1154
              ||||||||| |||| |||||| ||| | ||||||||||||||||||||
Sbjct: 102373 acaggtcctttgaattttgtgttggaagcttataatggtagtttgcca 102420



 Score = 54.0 bits (27), Expect = 0.004
 Identities = 63/75 (84%)
 Strand = Plus / Plus

                                                                         
Query: 1107  acaggtcctatgaaatttgtgctggcaccttataatggtagtttgccacagttggcctat 1166
             ||||| ||||||||||  ||| |||  ||||||||||||||||||||||  ||||  |||
Sbjct: 91730 acaggacctatgaaatacgtgttggagccttataatggtagtttgccacgattggtttat 91789

                            
Query: 1167  aatccatattcatgg 1181
             ||||  |||||||||
Sbjct: 91790 aatcagtattcatgg 91804



 Score = 52.0 bits (26), Expect = 0.015
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                                
Query: 177    gagctcttctactacttcgtggagtcagagaggaggccggacacggaccc 226
              |||||||||||||||||||| || ||||||| ||  || |||||||||||
Sbjct: 102095 gagctcttctactacttcgttgaatcagagacgaaccctgacacggaccc 102144



 Score = 48.1 bits (24), Expect = 0.24
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                          
Query: 85     cgtcggtggtgacccatctcccgggcttccatggccgccttccgttccacctggagaccg 144
              |||||||| | ||||| |||||||||||||| |||||| | | |||| |||| ||||| |
Sbjct: 111374 cgtcggtgatcacccacctcccgggcttccacggccgcttgcggttctaccttgagactg 111433

                  
Query: 145    ggta 148
              ||||
Sbjct: 111434 ggta 111437
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score = 67.9 bits (34), Expect = 3e-07
 Identities = 52/58 (89%)
 Strand = Plus / Plus

                                                                          
Query: 154      gcgtggacgaggagacgggagcggagctcttctactacttcgtggagtcagagaggag 211
                ||||||| |||||||| ||  |||||||||||||||||||||||||||| ||| ||||
Sbjct: 28231006 gcgtggaggaggagaccgggacggagctcttctactacttcgtggagtcggagcggag 28231063
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>dbj|AP004096.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1743_B12
          Length = 175645

 Score = 67.9 bits (34), Expect = 3e-07
 Identities = 52/58 (89%)
 Strand = Plus / Plus

                                                                       
Query: 154   gcgtggacgaggagacgggagcggagctcttctactacttcgtggagtcagagaggag 211
             ||||||| |||||||| ||  |||||||||||||||||||||||||||| ||| ||||
Sbjct: 22763 gcgtggaggaggagaccgggacggagctcttctactacttcgtggagtcggagcggag 22820
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>emb|CT829103.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA045J09, full
           insert sequence
          Length = 553

 Score = 65.9 bits (33), Expect = 1e-06
 Identities = 54/61 (88%)
 Strand = Plus / Plus

                                                                       
Query: 85  cgtcggtggtgacccatctcccgggcttccatggccgccttccgttccacctggagaccg 144
           |||||||| | ||||| |||||||||||||| |||||| | ||||||||||| |||||||
Sbjct: 115 cgtcggtgatcacccacctcccgggcttccacggccgcttgccgttccaccttgagaccg 174

            
Query: 145 g 145
           |
Sbjct: 175 g 175



 Score = 63.9 bits (32), Expect = 4e-06
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                   
Query: 156 gtggacgaggagacgggagcggagctcttctactacttcgtggagtcagagaggag 211
           |||||||||||||||||  | |||||||||||||||||||| || || ||||||||
Sbjct: 257 gtggacgaggagacgggcactgagctcttctactacttcgttgaatcggagaggag 312
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>dbj|AK241620.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065186H23,
           full insert sequence
          Length = 2457

 Score = 58.0 bits (29), Expect = 3e-04
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                       
Query: 138 gagaccgggtacatcagcgtggacgaggagacgggagcggagctcttctactacttcgtg 197
           |||||||||||| | | ||| ||||||||||  || || ||||| |||||||||||||||
Sbjct: 219 gagaccgggtacgtgaccgtcgacgaggagaacggggcagagctgttctactacttcgtg 278

                
Query: 198 gagtc 202
           |||||
Sbjct: 279 gagtc 283
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>ref|NM_001074320.1| Oryza sativa (japonica cultivar-group) Os11g0430000 (Os11g0430000)
           mRNA, complete cds
          Length = 516

 Score = 58.0 bits (29), Expect = 3e-04
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                       
Query: 138 gagaccgggtacatcagcgtggacgaggagacgggagcggagctcttctactacttcgtg 197
           |||||||||||| | | ||| ||||||||||  || || ||||| |||||||||||||||
Sbjct: 151 gagaccgggtacgtgaccgtcgacgaggagaacggggcagagctgttctactacttcgtg 210

                
Query: 198 gagtc 202
           |||||
Sbjct: 211 gagtc 215
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6
          Length = 30731886

 Score = 54.0 bits (27), Expect = 0.004
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                               
Query: 102      ctcccgggcttccatggccgccttccgttccacctggagaccgggta 148
                ||||||||||||||||||||||| || ||| |||| ||||| |||||
Sbjct: 18691739 ctcccgggcttccatggccgcctgccattctacctcgagactgggta 18691785



 Score = 48.1 bits (24), Expect = 0.24
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                                
Query: 177      gagctcttctactacttcgtggagtcagagag 208
                |||||||||||||||||||| || ||||||||
Sbjct: 18691931 gagctcttctactacttcgttgaatcagagag 18691962
to top
>dbj|AP005492.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0077L03
          Length = 171177

 Score = 54.0 bits (27), Expect = 0.004
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                            
Query: 102   ctcccgggcttccatggccgccttccgttccacctggagaccgggta 148
             ||||||||||||||||||||||| || ||| |||| ||||| |||||
Sbjct: 17490 ctcccgggcttccatggccgcctgccattctacctcgagactgggta 17536



 Score = 48.1 bits (24), Expect = 0.24
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 177   gagctcttctactacttcgtggagtcagagag 208
             |||||||||||||||||||| || ||||||||
Sbjct: 17682 gagctcttctactacttcgttgaatcagagag 17713
to top
>dbj|AP005468.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0020P04
          Length = 153894

 Score = 54.0 bits (27), Expect = 0.004
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                             
Query: 102    ctcccgggcttccatggccgccttccgttccacctggagaccgggta 148
              ||||||||||||||||||||||| || ||| |||| ||||| |||||
Sbjct: 143842 ctcccgggcttccatggccgcctgccattctacctcgagactgggta 143888



 Score = 48.1 bits (24), Expect = 0.24
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                              
Query: 177    gagctcttctactacttcgtggagtcagagag 208
              |||||||||||||||||||| || ||||||||
Sbjct: 144034 gagctcttctactacttcgttgaatcagagag 144065
to top
>ref|NM_001057697.1| Oryza sativa (japonica cultivar-group) Os03g0730500 (Os03g0730500)
           mRNA, complete cds
          Length = 2967

 Score = 52.0 bits (26), Expect = 0.015
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 177 gagctcttctactacttcgtggagtcagagaggaggccggacacggaccc 226
           |||||||||||||||||||| || ||||||| ||  || |||||||||||
Sbjct: 265 gagctcttctactacttcgttgaatcagagacgaaccctgacacggaccc 314



 Score = 52.0 bits (26), Expect = 0.015
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                          
Query: 1109 aggtcctatgaaatttgtgctggcaccttataatggtagtttgcca 1154
            ||||||| |||| |||||| ||| | ||||||||||||||||||||
Sbjct: 378  aggtcctttgaattttgtgttggaagcttataatggtagtttgcca 423
to top
>dbj|AK066640.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073A13, full
           insert sequence
          Length = 2970

 Score = 52.0 bits (26), Expect = 0.015
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 177 gagctcttctactacttcgtggagtcagagaggaggccggacacggaccc 226
           |||||||||||||||||||| || ||||||| ||  || |||||||||||
Sbjct: 266 gagctcttctactacttcgttgaatcagagacgaaccctgacacggaccc 315



 Score = 52.0 bits (26), Expect = 0.015
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                          
Query: 1109 aggtcctatgaaatttgtgctggcaccttataatggtagtttgcca 1154
            ||||||| |||| |||||| ||| | ||||||||||||||||||||
Sbjct: 379  aggtcctttgaattttgtgttggaagcttataatggtagtttgcca 424
to top
>dbj|AK066477.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013070H07, full
           insert sequence
          Length = 1931

 Score = 52.0 bits (26), Expect = 0.015
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 177 gagctcttctactacttcgtggagtcagagaggaggccggacacggaccc 226
           |||||||||||||||||||| || ||||||| ||  || |||||||||||
Sbjct: 349 gagctcttctactacttcgttgaatcagagacgaaccctgacacggaccc 398



 Score = 52.0 bits (26), Expect = 0.015
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                          
Query: 1109 aggtcctatgaaatttgtgctggcaccttataatggtagtttgcca 1154
            ||||||| |||| |||||| ||| | ||||||||||||||||||||
Sbjct: 462  aggtcctttgaattttgtgttggaagcttataatggtagtttgcca 507
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12
          Length = 27566993

 Score = 50.1 bits (25), Expect = 0.061
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                             
Query: 174      gcggagctcttctactacttcgtggagtc 202
                ||||||||||||||||||||||| |||||
Sbjct: 24148113 gcggagctcttctactacttcgtcgagtc 24148085
to top
>emb|AL772426.5|CNS08CA4 Oryza sativa chromosome 12, . BAC OJ1310_C03 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 132733

 Score = 50.1 bits (25), Expect = 0.061
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 174   gcggagctcttctactacttcgtggagtc 202
             ||||||||||||||||||||||| |||||
Sbjct: 32804 gcggagctcttctactacttcgtcgagtc 32776
to top
>gb|AC120536.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0035N09, complete sequence
          Length = 129468

 Score = 48.1 bits (24), Expect = 0.24
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                         
Query: 159   gacgaggagacgggagcggagctcttctactacttcgtggagtc 202
             ||||||||||  || || ||||| ||||||||||||||||||||
Sbjct: 24960 gacgaggagaacggggcagagctgttctactacttcgtggagtc 24917
to top
>gb|AC136191.5| Rattus norvegicus  BAC CH230-52I17 (Children's Hospital Oakland Research
              Institute Rat (BN/SsNHsd/MCW) BAC library) complete
              sequence
          Length = 221923

 Score = 48.1 bits (24), Expect = 0.24
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                          
Query: 3806   ttattttagtacttttagtttagtttat 3833
              ||||||||||| ||||||||||||||||
Sbjct: 151446 ttattttagtatttttagtttagtttat 151419
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11
          Length = 28386948

 Score = 48.1 bits (24), Expect = 0.24
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                            
Query: 159      gacgaggagacgggagcggagctcttctactacttcgtggagtc 202
                ||||||||||  || || ||||| ||||||||||||||||||||
Sbjct: 13206149 gacgaggagaacggggcagagctgttctactacttcgtggagtc 13206106
to top
>gb|AC134428.3| Mus musculus BAC clone RP24-330C24 from 10, complete sequence
          Length = 148006

 Score = 48.1 bits (24), Expect = 0.24
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 1360  tttctccttttctttgcatgtcttaata 1387
             |||||||||||||||| |||||||||||
Sbjct: 19887 tttctccttttctttgtatgtcttaata 19860
to top
>gb|AC112001.6| Rattus norvegicus 2 BAC CH230-54E3 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 225052

 Score = 46.1 bits (23), Expect = 0.95
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 3802   tttgttattttagtacttttagt 3824
              |||||||||||||||||||||||
Sbjct: 133501 tttgttattttagtacttttagt 133479
to top
>emb|AL645617.9| Human DNA sequence from clone RP11-796C22 on chromosome 10 Contains
             part of the UPF2 gene for UPF2 regulator of nonsense
             transcripts homolog (yeast) (FLJ38872), complete sequence
          Length = 76287

 Score = 46.1 bits (23), Expect = 0.95
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 354   aaaagtttaaattttaaaatgaa 376
             |||||||||||||||||||||||
Sbjct: 50408 aaaagtttaaattttaaaatgaa 50386
to top
>emb|AL445988.8| Human DNA sequence from clone RP11-625P7 on chromosome 6 Contains a
            novel gene, complete sequence
          Length = 63196

 Score = 46.1 bits (23), Expect = 0.95
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 353  aaaaagtttaaattttaaaatgaagag 379
            |||||||| ||||||||||||||||||
Sbjct: 4150 aaaaagttaaaattttaaaatgaagag 4124
to top
>gb|AC151739.15| Medicago truncatula clone mth2-49e16, complete sequence
          Length = 91126

 Score = 46.1 bits (23), Expect = 0.95
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 2280  ttttctttaaataaaaaacaaaatttt 2306
             |||||||||||||||||||| ||||||
Sbjct: 40973 ttttctttaaataaaaaacataatttt 40999
to top
>gb|AC025858.14| Homo sapiens chromosome 17, clone RP11-700K10, complete sequence
          Length = 65609

 Score = 46.1 bits (23), Expect = 0.95
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 2280 ttttctttaaataaaaaacaaaatttt 2306
            |||||||||||||||||| ||||||||
Sbjct: 3171 ttttctttaaataaaaaaaaaaatttt 3145
to top
>ref|NM_001058700.1| Oryza sativa (japonica cultivar-group) Os04g0176400 (Os04g0176400)
           mRNA, complete cds
          Length = 1404

 Score = 44.1 bits (22), Expect = 3.8
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 181 tcttctactacttcgtggagtcagagaggaggccggacacggaccccgtc 230
           |||||||||||||| | ||||| |||||||| |||||   ||||||||||
Sbjct: 194 tcttctactacttcatcgagtcggagaggagcccggaggaggaccccgtc 243
to top
>ref|NW_001091929.1| Theileria annulata strain Ankara clone C9
          Length = 2592520

 Score = 44.1 bits (22), Expect = 3.8
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 353     aaaaagtttaaattttaaaatg 374
               ||||||||||||||||||||||
Sbjct: 1266538 aaaaagtttaaattttaaaatg 1266517
to top
>gb|AC184826.9| Canis Familiaris chromosome 25, clone XX-19M5, complete sequence
          Length = 214338

 Score = 44.1 bits (22), Expect = 3.8
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 2293  aaaaacaaaattttgaactgtt 2314
             ||||||||||||||||||||||
Sbjct: 74133 aaaaacaaaattttgaactgtt 74112
to top
>gb|AC147350.2| Xenopus tropicalis clone CH216-142P22, complete sequence
          Length = 59717

 Score = 44.1 bits (22), Expect = 3.8
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 2280  ttttctttaaataaaaaacaaa 2301
             ||||||||||||||||||||||
Sbjct: 22893 ttttctttaaataaaaaacaaa 22914
to top
>gb|AC136471.1| Solanum demissum chromosome 11 clone PGEC561, complete sequence
          Length = 123428

 Score = 44.1 bits (22), Expect = 3.8
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1648  aaagaaaatataagataaaaaa 1669
             ||||||||||||||||||||||
Sbjct: 26084 aaagaaaatataagataaaaaa 26105
to top
>gb|AC024214.1| Caenorhabditis elegans cosmid Y77E11A, complete sequence
          Length = 121081

 Score = 44.1 bits (22), Expect = 3.8
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 2172  gatatttcaaaaaattatagga 2193
             ||||||||||||||||||||||
Sbjct: 59709 gatatttcaaaaaattatagga 59730
to top
>gb|AC147677.4| Canis Familiaris, clone XX-25A1, complete sequence
          Length = 154021

 Score = 44.1 bits (22), Expect = 3.8
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 2277  tcattttctttaaataaaaaacaaaa 2302
             ||||||||||||||||||||| ||||
Sbjct: 78938 tcattttctttaaataaaaaaaaaaa 78913
to top
>gb|AC127250.3| Mus musculus BAC clone RP24-482H23 from chromosome 3, complete sequence
          Length = 136942

 Score = 44.1 bits (22), Expect = 3.8
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 2270  ttcatattcattttctttaaat 2291
             ||||||||||||||||||||||
Sbjct: 57948 ttcatattcattttctttaaat 57927
to top
>gb|AC117190.3| Mus musculus BAC clone RP23-55A21 from 2, complete sequence
          Length = 189549

 Score = 44.1 bits (22), Expect = 3.8
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 2277  tcattttctttaaataaaaaacaaaa 2302
             ||||||||||| ||||||||||||||
Sbjct: 34965 tcattttcttttaataaaaaacaaaa 34940
to top
>emb|CR759910.13| Zebrafish DNA sequence from clone DKEYP-79C4 in linkage group 19,
              complete sequence
          Length = 217814

 Score = 44.1 bits (22), Expect = 3.8
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 2280   ttttctttaaataaaaaacaaaattt 2305
              |||| |||||||||||||||||||||
Sbjct: 156158 ttttttttaaataaaaaacaaaattt 156133
to top
>gb|AC154492.2| Mus musculus BAC clone RP24-107B10 from chromosome 17, complete
            sequence
          Length = 172605

 Score = 44.1 bits (22), Expect = 3.8
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 2280 ttttctttaaataaaaaacaaa 2301
            ||||||||||||||||||||||
Sbjct: 7331 ttttctttaaataaaaaacaaa 7352
to top
>ref|NR_001458.1| Homo sapiens BIC transcript (BIC) on chromosome 21
          Length = 12969

 Score = 44.1 bits (22), Expect = 3.8
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 2277  tcattttctttaaataaaaaacaaaa 2302
             |||| |||||||||||||||||||||
Sbjct: 11441 tcatcttctttaaataaaaaacaaaa 11416
to top
>emb|BX927107.9| Zebrafish DNA sequence from clone CH211-281H20 in linkage group 7,
             complete sequence
          Length = 135772

 Score = 44.1 bits (22), Expect = 3.8
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 2281  tttctttaaataaaaaacaaaa 2302
             ||||||||||||||||||||||
Sbjct: 44497 tttctttaaataaaaaacaaaa 44518
to top
>gb|AC108162.4| Homo sapiens BAC clone RP11-686G17 from 4, complete sequence
          Length = 185624

 Score = 44.1 bits (22), Expect = 3.8
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 2281  tttctttaaataaaaaacaaaatttt 2306
             ||||||||| ||||||||||||||||
Sbjct: 27980 tttctttaattaaaaaacaaaatttt 28005
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score = 44.1 bits (22), Expect = 3.8
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                                 
Query: 181     tcttctactacttcgtggagtcagagaggaggccggacacggaccccgtc 230
               |||||||||||||| | ||||| |||||||| |||||   ||||||||||
Sbjct: 5179805 tcttctactacttcatcgagtcggagaggagcccggaggaggaccccgtc 5179756
to top
>gb|AC083829.5| Homo sapiens BAC clone RP11-466G12 from 4, complete sequence
          Length = 189402

 Score = 44.1 bits (22), Expect = 3.8
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 1545  atgctggaaagatgtctccaattatc 1570
             ||||||||||||||| ||||||||||
Sbjct: 77220 atgctggaaagatgtatccaattatc 77195
to top
>emb|AL512843.4| Human DNA sequence from clone RP11-184O20 on chromosome 1 Contains part
             of the DNM3 gene for dynamin 3, complete sequence
          Length = 75684

 Score = 44.1 bits (22), Expect = 3.8
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 1649  aagaaaatataagataaaaaat 1670
             ||||||||||||||||||||||
Sbjct: 54504 aagaaaatataagataaaaaat 54483
to top
>emb|AL606993.2|OSJN00121 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0051N19,
             complete sequence
          Length = 49800

 Score = 44.1 bits (22), Expect = 3.8
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                               
Query: 181   tcttctactacttcgtggagtcagagaggaggccggacacggaccccgtc 230
             |||||||||||||| | ||||| |||||||| |||||   ||||||||||
Sbjct: 14210 tcttctactacttcatcgagtcggagaggagcccggaggaggaccccgtc 14161
to top
>emb|BX649311.10| Zebrafish DNA sequence from clone DKEY-63I8 in linkage group 2, complete
              sequence
          Length = 228024

 Score = 44.1 bits (22), Expect = 3.8
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 913    tttccctaaaaaatatatattt 934
              ||||||||||||||||||||||
Sbjct: 107488 tttccctaaaaaatatatattt 107467
to top
>dbj|BS000105.1| Pan troglodytes chromosome 22 clone:RP43-117B17, map 22, complete
             sequences
          Length = 164236

 Score = 44.1 bits (22), Expect = 3.8
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 2277  tcattttctttaaataaaaaacaaaa 2302
             |||| |||||||||||||||||||||
Sbjct: 50410 tcatcttctttaaataaaaaacaaaa 50385
to top
>gb|AC007238.3| Homo sapiens BAC clone RP11-19M18 from 2, complete sequence
          Length = 169147

 Score = 44.1 bits (22), Expect = 3.8
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 1640 tttgcagcaaagaaaatataag 1661
            ||||||||||||||||||||||
Sbjct: 3310 tttgcagcaaagaaaatataag 3331
to top
>gb|AC024902.54| Homo sapiens 12 BAC RP11-684O24 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 167113

 Score = 44.1 bits (22), Expect = 3.8
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 3792  ttgagtttcttttgttatttta 3813
             ||||||||||||||||||||||
Sbjct: 17366 ttgagtttcttttgttatttta 17345
to top
>gb|AC010127.12| Homo sapiens BAC clone RP11-2I8 from 2, complete sequence
          Length = 190066

 Score = 44.1 bits (22), Expect = 3.8
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 1621   tgataatctagtaacttcattt 1642
              ||||||||||||||||||||||
Sbjct: 174034 tgataatctagtaacttcattt 174055
to top
>emb|BX323808.7| Zebrafish DNA sequence from clone DKEY-117N4, complete sequence
          Length = 152686

 Score = 44.1 bits (22), Expect = 3.8
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 2281  tttctttaaataaaaaacaaaa 2302
             ||||||||||||||||||||||
Sbjct: 44514 tttctttaaataaaaaacaaaa 44535
to top
>gb|AC024873.1|AC024873 Caenorhabditis elegans clone Y77E11A, complete sequence
          Length = 121081

 Score = 44.1 bits (22), Expect = 3.8
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 2172  gatatttcaaaaaattatagga 2193
             ||||||||||||||||||||||
Sbjct: 59709 gatatttcaaaaaattatagga 59730
to top
>dbj|AP001693.1| Homo sapiens genomic DNA, chromosome 21q, section 37/105
          Length = 340000

 Score = 44.1 bits (22), Expect = 3.8
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 2277   tcattttctttaaataaaaaacaaaa 2302
              |||| |||||||||||||||||||||
Sbjct: 319677 tcatcttctttaaataaaaaacaaaa 319652
to top
>gb|AY112148.1| Zea mays CL62029_1 mRNA sequence
          Length = 659

 Score = 44.1 bits (22), Expect = 3.8
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 179 gctcttctactacttcgtggag 200
           ||||||||||||||||||||||
Sbjct: 236 gctcttctactacttcgtggag 257
to top
>gb|AC163671.5| Mus musculus BAC clone RP23-21K2 from chromosome 3, complete sequence
          Length = 215382

 Score = 44.1 bits (22), Expect = 3.8
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 2270   ttcatattcattttctttaaat 2291
              ||||||||||||||||||||||
Sbjct: 203130 ttcatattcattttctttaaat 203151
to top
>ref|XM_736658.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000095.05.0)
            partial mRNA
          Length = 1029

 Score = 44.1 bits (22), Expect = 3.8
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 2288 aaataaaaaacaaaattttgaa 2309
            ||||||||||||||||||||||
Sbjct: 114  aaataaaaaacaaaattttgaa 135
to top
>emb|AL672025.8| Mouse DNA sequence from clone RP23-322K17 on chromosome X, complete
              sequence
          Length = 170966

 Score = 44.1 bits (22), Expect = 3.8
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 3802   tttgttattttagtacttttagttta 3827
              ||||||||||||||||||||| ||||
Sbjct: 135016 tttgttattttagtacttttaattta 135041
to top
>emb|AL929043.7| Mouse DNA sequence from clone RP23-58H6 on chromosome 2, complete
              sequence
          Length = 164834

 Score = 44.1 bits (22), Expect = 3.8
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 2277   tcattttctttaaataaaaaacaaaa 2302
              ||||||||||| ||||||||||||||
Sbjct: 129204 tcattttcttttaataaaaaacaaaa 129179
to top
>gb|L33096.1|HIVJAE Human immunodeficiency virus type 2 (clone 12) env gene, partial
           cds
          Length = 453

 Score = 44.1 bits (22), Expect = 3.8
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 968 ccatgtcatgttttcccagtttggat 993
           |||||||||||||| |||||||||||
Sbjct: 204 ccatgtcatgttttgccagtttggat 179
to top
>dbj|AP000223.1| Homo sapiens genomic DNA, chromosome 21q21.2, LL56-APP region,
            clone:S11, complete sequence
          Length = 84031

 Score = 44.1 bits (22), Expect = 3.8
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 2277 tcattttctttaaataaaaaacaaaa 2302
            |||| |||||||||||||||||||||
Sbjct: 9674 tcatcttctttaaataaaaaacaaaa 9649
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>dbj|AP000137.1| Homo sapiens genomic DNA, chromosome 21q21.2, LL56-APP region, clone
             B2291C14-R44F3, segment 2/10, complete sequence
          Length = 100000

 Score = 44.1 bits (22), Expect = 3.8
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 2277  tcattttctttaaataaaaaacaaaa 2302
             |||| |||||||||||||||||||||
Sbjct: 79973 tcatcttctttaaataaaaaacaaaa 79948
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>dbj|AP000085.1| Homo sapiens genomic DNA of 21q22.1, APP related, B2291C14-T1533
             region, segment 2/7
          Length = 100000

 Score = 44.1 bits (22), Expect = 3.8
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 2277  tcattttctttaaataaaaaacaaaa 2302
             |||| |||||||||||||||||||||
Sbjct: 79973 tcatcttctttaaataaaaaacaaaa 79948


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 758,160,738
Number of extensions: 43592859
Number of successful extensions: 341558
Number of sequences better than 10.0: 64
Number of HSP's gapped: 341555
Number of HSP's successfully gapped: 85
Length of query: 3872
Length of database: 18,610,659,111
Length adjustment: 24
Effective length of query: 3848
Effective length of database: 18,499,340,271
Effective search space: 71185461362808
Effective search space used: 71185461362808
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 15 (30.2 bits)
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