ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf30o15 |
|---|---|
| Clone Library Name | barley_pub |
>Q7DLR9:PSB4_ARATH Proteasome subunit beta type 4 precursor - Arabidopsis thaliana| (Mouse-ear cress) Length = 246 Score = 338 bits (868), Expect = 2e-92 Identities = 158/230 (68%), Positives = 189/230 (82%) Frame = +2 Query: 194 TQRTLNPYVTGNSVIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEF 373 +QRTL PYVTG S++A+KYKDGV+MA D G SYGSTLRYK++ER+K +GKHSL+G SGE Sbjct: 21 SQRTLYPYVTGTSIVAIKYKDGVLMASDMGGSYGSTLRYKNIERVKAIGKHSLLGASGEI 80 Query: 374 SDFQEILRYLDELTLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXX 553 SDFQEILRYLDELTLND+MWDDGNSLGPKEIH YLTRVMYNRRNKF+PLWN+ Sbjct: 81 SDFQEILRYLDELTLNDNMWDDGNSLGPKEIHNYLTRVMYNRRNKFNPLWNT----LVLG 136 Query: 554 XXXXDEKYLGMVNMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLV 733 + YLGMV+MIG FE++H+ATGFGNH+A PILR EW D++FE+ VKL+EKC+ V Sbjct: 137 GVKNGKSYLGMVSMIGVSFEDDHVATGFGNHLARPILRDEWHADLSFEDGVKLLEKCMRV 196 Query: 734 LLYRDRSSINKFQIAKITTEGSTIYPPYALKTNWGFAAFENPSKGAVGTW 883 LLYRDRS+INK QIAKIT EG T+ PY+LKT W F++F NP+ GA G+W Sbjct: 197 LLYRDRSAINKLQIAKITEEGVTVSQPYSLKTYWEFSSFHNPTAGAAGSW 246
>P28024:PSB4_XENLA Proteasome subunit beta type 4 precursor - Xenopus laevis (African| clawed frog) Length = 242 Score = 180 bits (457), Expect = 8e-45 Identities = 87/218 (39%), Positives = 143/218 (65%), Gaps = 2/218 (0%) Frame = +2 Query: 197 QRTLNPYVTGNSVIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFS 376 + TLNP VTG SV+ +K+ GVI+A D SYGS R++++ RI +V +++++G SG+++ Sbjct: 22 RHTLNPMVTGTSVLGVKFDGGVIIAADMLGSYGSLARFRNISRIMKVNENTILGASGDYA 81 Query: 377 DFQEILRYLDELTLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXX 556 D+Q + + +D++ +++ + DG++ PK IH++LTRVMYNRR+K +PLWN+ Sbjct: 82 DYQYLKQVIDQMVIDEELVGDGHNYSPKAIHSWLTRVMYNRRSKMNPLWNT----VVIGG 137 Query: 557 XXXDEKYLGMVNMIGTHFEENHIATGFGNHMAIPILR--GEWREDMTFEEAVKLIEKCLL 730 E +LG V+ +G +E IATGFG ++A P+LR E + ++ EEA +L+++C+ Sbjct: 138 FYNGESFLGYVDKLGVAYEAPTIATGFGAYLAQPLLREVTENKATLSKEEARQLVDRCMK 197 Query: 731 VLLYRDRSSINKFQIAKITTEGSTIYPPYALKTNWGFA 844 VL YRD S N+F+I +T G + P + +TNW A Sbjct: 198 VLYYRDARSYNRFEITTVTESGVEVEGPLSSETNWEIA 235
>Q3T108:PSB4_BOVIN Proteasome subunit beta type 4 precursor - Bos taurus (Bovine)| Length = 264 Score = 179 bits (454), Expect = 2e-44 Identities = 88/217 (40%), Positives = 140/217 (64%), Gaps = 2/217 (0%) Frame = +2 Query: 200 RTLNPYVTGNSVIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSD 379 RT NP VTG SV+ +K++ GV++A D SYGS R++++ RI V +++G SG+++D Sbjct: 45 RTQNPMVTGTSVLGLKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYAD 104 Query: 380 FQEILRYLDELTLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXX 559 FQ + + L ++ +++ + DG+S PK IH++LTR MY+RR+K +PLWN+ Sbjct: 105 FQYLKQVLGQMVIDEELLGDGHSYSPKAIHSWLTRAMYSRRSKMNPLWNT----MVIGGY 160 Query: 560 XXDEKYLGMVNMIGTHFEENHIATGFGNHMAIPILRG--EWREDMTFEEAVKLIEKCLLV 733 E +LG V+M+G +E +ATG+G ++A P+LR E + ++ EA +L+E+C+ V Sbjct: 161 ADGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRV 220 Query: 734 LLYRDRSSINKFQIAKITTEGSTIYPPYALKTNWGFA 844 L YRD S N+FQIA +T +G I P + +TNW A Sbjct: 221 LYYRDARSYNRFQIATVTEKGVEIEGPLSAETNWDIA 257
>P28070:PSB4_HUMAN Proteasome subunit beta type 4 precursor - Homo sapiens (Human)| Length = 264 Score = 177 bits (448), Expect = 8e-44 Identities = 87/217 (40%), Positives = 139/217 (64%), Gaps = 2/217 (0%) Frame = +2 Query: 200 RTLNPYVTGNSVIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSD 379 RT NP VTG SV+ +K++ GV++A D SYGS R++++ RI V +++G SG+++D Sbjct: 45 RTQNPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYAD 104 Query: 380 FQEILRYLDELTLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXX 559 FQ + + L ++ +++ + DG+S P+ IH++LTR MY+RR+K +PLWN+ Sbjct: 105 FQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNT----MVIGGY 160 Query: 560 XXDEKYLGMVNMIGTHFEENHIATGFGNHMAIPILRG--EWREDMTFEEAVKLIEKCLLV 733 E +LG V+M+G +E +ATG+G ++A P+LR E + ++ EA L+E+C+ V Sbjct: 161 ADGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMRV 220 Query: 734 LLYRDRSSINKFQIAKITTEGSTIYPPYALKTNWGFA 844 L YRD S N+FQIA +T +G I P + +TNW A Sbjct: 221 LYYRDARSYNRFQIATVTEKGVEIEGPLSTETNWDIA 257
>Q9USQ9:PSB4_SCHPO Probable proteasome subunit beta type 4 - Schizosaccharomyces pombe| (Fission yeast) Length = 262 Score = 176 bits (447), Expect = 1e-43 Identities = 90/220 (40%), Positives = 134/220 (60%), Gaps = 4/220 (1%) Frame = +2 Query: 197 QRTLNPYVTGNSVIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFS 376 QRT+ P VTG+SV+A+K+ DGV++A D ASYGS R+ VER+ +VG ++++G G+ S Sbjct: 34 QRTVQPIVTGSSVLALKFADGVMIAADNLASYGSLARFYDVERLTKVGDNTIVGAGGDIS 93 Query: 377 DFQEILRYLDELTLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXX 556 D+Q+I R L++L + + + DG +L P IH YL++V+Y RRNK DP WN Sbjct: 94 DYQQIQRLLEKLEIKEGNYGDGYALQPSYIHEYLSKVLYARRNKLDPYWNQ--LIVAGVD 151 Query: 557 XXXDEKYLGMVNMIGTHFEENHIATGFGNHMAIPILRGEWRED----MTFEEAVKLIEKC 724 E Y+ ++ GT + IATGF H+A+P+LR +D ++ E A I++C Sbjct: 152 GENKEPYVAFADLRGTTYSAPAIATGFAMHLALPMLRKATDDDRWKTLSKESARATIDEC 211 Query: 725 LLVLLYRDRSSINKFQIAKITTEGSTIYPPYALKTNWGFA 844 + VL YRD S+NKF +A IT EG ++ + W FA Sbjct: 212 MRVLFYRDARSLNKFSVATITPEGIEFQTDQSVSSKWAFA 251
>P34067:PSB4_RAT Proteasome subunit beta type 4 precursor - Rattus norvegicus (Rat)| Length = 263 Score = 176 bits (447), Expect = 1e-43 Identities = 86/217 (39%), Positives = 140/217 (64%), Gaps = 2/217 (0%) Frame = +2 Query: 200 RTLNPYVTGNSVIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSD 379 RT NP VTG SV+ +K+ GV++A D SYGS R++++ RI V +++G SG+++D Sbjct: 44 RTQNPMVTGTSVLGVKFDCGVVIAADMLGSYGSLARFRNISRIMRVNDSTMLGASGDYAD 103 Query: 380 FQEILRYLDELTLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXX 559 FQ + + L ++ +++ ++ DG+S P+ IH++LTR MY+RR+K +PLWN+ Sbjct: 104 FQYLKQVLGQMVIDEELFGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNT----KVIGGY 159 Query: 560 XXDEKYLGMVNMIGTHFEENHIATGFGNHMAIPILRG--EWREDMTFEEAVKLIEKCLLV 733 E +LG V+M+G +E +ATG+G ++A P+LR E + ++ EA +L+E+C+ V Sbjct: 160 AGGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRV 219 Query: 734 LLYRDRSSINKFQIAKITTEGSTIYPPYALKTNWGFA 844 L YRD S N+FQ+A +T +G I P + +TNW A Sbjct: 220 LYYRDARSYNRFQVATVTEKGVEIEGPLSAQTNWDIA 256
>P99026:PSB4_MOUSE Proteasome subunit beta type 4 precursor - Mus musculus (Mouse)| Length = 264 Score = 176 bits (447), Expect = 1e-43 Identities = 87/217 (40%), Positives = 139/217 (64%), Gaps = 2/217 (0%) Frame = +2 Query: 200 RTLNPYVTGNSVIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSD 379 RT NP VTG SV+ +K+ GV++A D SYGS R++++ RI V +++G SG+++D Sbjct: 45 RTQNPMVTGTSVLGVKFDGGVVIAADMLGSYGSLARFRNISRIMRVNDSTMLGASGDYAD 104 Query: 380 FQEILRYLDELTLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXX 559 FQ + + L ++ +++ + DG+S P+ IH++LTR MY+RR+K +PLWN+ Sbjct: 105 FQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNT----MVIGGY 160 Query: 560 XXDEKYLGMVNMIGTHFEENHIATGFGNHMAIPILRG--EWREDMTFEEAVKLIEKCLLV 733 E +LG V+M+G +E +ATG+G ++A P+LR E + ++ EA +L+E+C+ V Sbjct: 161 ADGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRV 220 Query: 734 LLYRDRSSINKFQIAKITTEGSTIYPPYALKTNWGFA 844 L YRD S N+FQIA +T +G I P + +TNW A Sbjct: 221 LYYRDARSYNRFQIATVTEKGVEIEGPLSAQTNWDIA 257
>Q9VNA5:PSB4_DROME Probable proteasome subunit beta type 4 - Drosophila melanogaster| (Fruit fly) Length = 268 Score = 154 bits (390), Expect = 4e-37 Identities = 80/225 (35%), Positives = 130/225 (57%), Gaps = 11/225 (4%) Frame = +2 Query: 203 TLNPY---------VTGNSVIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLI 355 T+ PY TG SV+ ++Y GV++A DT SYGS RY+++ER+ +V K+ L+ Sbjct: 41 TMGPYGTKHSTASSTTGTSVLGIRYDSGVMLAADTLVSYGSMARYQNIERVFKVNKNILL 100 Query: 356 GGSGEFSDFQEILRYLDELTLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXX 535 GGSG+F+D Q I R +D+ + D DD + PK + +++TRV+YNRR++ +PL+ Sbjct: 101 GGSGDFADIQSIKRNIDQKMIEDQCCDDNIEMKPKSLASWMTRVLYNRRSRMNPLY---I 157 Query: 536 XXXXXXXXXXDEKYLGMVNMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFE--EAVK 709 YL V++ G +E+ +ATGF H+A+P++R + +D F EA + Sbjct: 158 DVVVGGVDNEGTPYLANVDLRGRSYEDYVVATGFARHLAVPLVREKKPKDRDFTAVEASE 217 Query: 710 LIEKCLLVLLYRDRSSINKFQIAKITTEGSTIYPPYALKTNWGFA 844 LI C+ VL YRD +I+++ + + G + P+ + NW FA Sbjct: 218 LIRTCMEVLYYRDTRNISQYTVGVCSVNGCGVEGPFQVNENWTFA 262
>P30657:PSB4_YEAST Proteasome component PRE4 - Saccharomyces cerevisiae (Baker's| yeast) Length = 266 Score = 130 bits (326), Expect = 1e-29 Identities = 81/203 (39%), Positives = 113/203 (55%), Gaps = 9/203 (4%) Frame = +2 Query: 203 TLNPYVTGNSVIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDF 382 T P VTG SVI+MKY +GVI+A D SYGS LR+ VER+ VG ++++G SG+ SD Sbjct: 34 TQQPIVTGTSVISMKYDNGVIIAADNLGSYGSLLRFNGVERLIPVGDNTVVGISGDISDM 93 Query: 383 QEILRYLDEL----TLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXX 550 Q I R L +L ++ + D +L P I YL VMY RR+K +PLWN+ Sbjct: 94 QHIERLLKDLVTENAYDNPLADAEEALEPSYIFEYLATVMYQRRSKMNPLWNA---IIVA 150 Query: 551 XXXXXDEKYLGMVNMIGTHFEENHIATGFGNHMAIPILRG--EWREDM---TFEEAVKLI 715 +++L VN++G + +ATGFG HMA P+LR + D+ T + A + I Sbjct: 151 GVQSNGDQFLRYVNLLGVTYSSPTLATGFGAHMANPLLRKVVDRESDIPKTTVQVAEEAI 210 Query: 716 EKCLLVLLYRDRSSINKFQIAKI 784 + VL YRD S F +A I Sbjct: 211 VNAMRVLYYRDARSSRNFSLAII 233
>Q29384:PSB4_PIG Proteasome subunit beta type 4 precursor - Sus scrofa (Pig)| Length = 154 Score = 112 bits (280), Expect = 3e-24 Identities = 48/110 (43%), Positives = 77/110 (70%) Frame = +2 Query: 200 RTLNPYVTGNSVIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSD 379 RT NP VTG SV+ +K++ GV++A D SYGS R++++ RI V +++G SG+++D Sbjct: 45 RTQNPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYAD 104 Query: 380 FQEILRYLDELTLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNS 529 FQ + + L ++ +++ + DG+S PK IH++LTR MYNRR K +PLW + Sbjct: 105 FQYLKQVLGQMVIDEELLGDGHSYSPKAIHSWLTRAMYNRRFKMNPLWTT 154
>Q8U125:PSMB_PYRFU Proteasome subunit beta precursor - Pyrococcus furiosus| Length = 206 Score = 78.2 bits (191), Expect = 5e-14 Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 1/202 (0%) Frame = +2 Query: 206 LNPYVTGNSVIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQ 385 L + G + + + K+GV++A DT AS G+ + K+V +I ++ +H I G+G+ D Sbjct: 4 LKEKLKGTTTVGLVCKEGVVLAADTRASLGNIIYAKNVTKIHKIDEHLAIAGAGDVGDIL 63 Query: 386 EILRYLDELTLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXX 565 ++R L + N + G + K + L ++ +K+ P Sbjct: 64 NLVRLL-KAEANLYKSTVGKEMSVKALATLLANIL--NGSKYFP------YLGWFLVGGY 114 Query: 566 DEK-YLGMVNMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLY 742 DEK L V+M+G E+N+ A G G A IL E+RE+M+ + +KL K + V + Sbjct: 115 DEKPRLFSVDMVGGITEDNYAAAGSGMEFAYSILDSEYREEMSVNDGIKLAVKAINVAIK 174 Query: 743 RDRSSINKFQIAKITTEGSTIY 808 RD + + + IT +G Y Sbjct: 175 RDVFTGDGLLVVTITKDGYKEY 196
>O50110:PSMB_PYRHO Proteasome subunit beta precursor - Pyrococcus horikoshii| Length = 207 Score = 72.0 bits (175), Expect = 4e-12 Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 1/192 (0%) Frame = +2 Query: 224 GNSVIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYL 403 G + + + KDGV++A D AS G+ + ++V +I ++ +H I G+G+ D ++R L Sbjct: 10 GTTTVGIVCKDGVVLAADRRASLGNIIYARNVTKIHKIDEHLAIAGAGDVGDILNLVRLL 69 Query: 404 DELTLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEK-YL 580 + G + K + L +M K+ P DEK L Sbjct: 70 -RAEAKLYYSQSGKRMSVKALATLLANIMNGA--KYFP------YLAWFLVGGYDEKPKL 120 Query: 581 GMVNMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSI 760 V+M+G E+ + G G A IL E+++++T EE +KL K + + RD S Sbjct: 121 YSVDMVGGITEDKYATAGSGMEFAYSILDSEYKDNLTLEEGIKLAVKAINTAIKRDVFSG 180 Query: 761 NKFQIAKITTEG 796 + + IT EG Sbjct: 181 DGILVVTITKEG 192
>Q9V0N9:PSMB_PYRAB Proteasome subunit beta precursor - Pyrococcus abyssi| Length = 207 Score = 69.7 bits (169), Expect = 2e-11 Identities = 50/192 (26%), Positives = 86/192 (44%), Gaps = 1/192 (0%) Frame = +2 Query: 224 GNSVIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYL 403 G + + + DGV++A D AS G+ + K+V +I ++ +H I G+G+ D ++R L Sbjct: 10 GTTTVGIVCSDGVVLAADRRASLGNIVYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLL 69 Query: 404 DELTLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEK-YL 580 + G + K + L ++ R W DEK L Sbjct: 70 -RAEAKLYYAQSGKRMSVKALATLLANMLNGARMLPYLAW--------FLVGGFDEKPRL 120 Query: 581 GMVNMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSI 760 V+M+G E+ ++A G G A +L E+RED+ E +K+ + + + RD S Sbjct: 121 YSVDMMGGITEDKYVAAGSGMEFAYSVLDSEYREDLKVREGIKIAVEAINSAIKRDVFSG 180 Query: 761 NKFQIAKITTEG 796 + + IT EG Sbjct: 181 DGIMVVTITEEG 192
>Q9UXF3:PSMB_SULSO Proteasome subunit beta precursor - Sulfolobus solfataricus| Length = 208 Score = 63.9 bits (154), Expect = 1e-09 Identities = 48/196 (24%), Positives = 88/196 (44%) Frame = +2 Query: 209 NPYVTGNSVIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQE 388 N + G + + ++ DGVI+A D AS G + K V ++ + I +G +D Q Sbjct: 9 NKILKGTTTVGIRVNDGVILAADRRASAGFFVANKMVRKVLYITDKIGITTAGSVADLQ- 67 Query: 389 ILRYLDELTLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXD 568 ++ ++ N + ++ GP I TR+ N D Sbjct: 68 ---FIYDVLKNIYHYNSITKYGPISIKGIATRLA----NVLSATKYFPYIVQILIGGYDD 120 Query: 569 EKYLGMVNMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRD 748 + L ++ +G EEN++ATG G+ +A+ +L E+ MT +EA L ++ + + RD Sbjct: 121 QPRLFNLDYLGDITEENYVATGSGSPVAMGVLEDEYNPKMTLDEAADLAKRAVFSAIKRD 180 Query: 749 RSSINKFQIAKITTEG 796 + +AKI ++G Sbjct: 181 SFTGTGVIVAKIHSKG 196
>Q58634:PSMB_METJA Proteasome subunit beta precursor - Methanococcus jannaschii| Length = 224 Score = 54.3 bits (129), Expect = 8e-07 Identities = 48/196 (24%), Positives = 85/196 (43%), Gaps = 1/196 (0%) Frame = +2 Query: 224 GNSVIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYL 403 G + + + D VI+A D AS G+ + K +++ ++ + + +G D Q I+R L Sbjct: 6 GTTTVGLICDDAVILATDKRASLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRLL 65 Query: 404 -DELTLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYL 580 E L + G ++ P L+ ++++ R P K Sbjct: 66 IAEAKL--YKMRTGRNIPPLACATLLSNILHSSR--MFPFLTQIIIGGYDLLEGA--KLF 119 Query: 581 GMVNMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSI 760 + + G + E+ ATG G+ +A +L + DM+ EE +KL L + RD S Sbjct: 120 SLDPLGGMNEEKTFTATGSGSPIAYGVLEAGYDRDMSVEEGIKLALNALKSAMERDTFSG 179 Query: 761 NKFQIAKITTEGSTIY 808 N +A IT +G I+ Sbjct: 180 NGISLAVITKDGVKIF 195
>Q8LD27:PSB6_ARATH Proteasome subunit beta type 6 precursor - Arabidopsis thaliana| (Mouse-ear cress) Length = 233 Score = 53.5 bits (127), Expect = 1e-06 Identities = 47/206 (22%), Positives = 86/206 (41%), Gaps = 6/206 (2%) Frame = +2 Query: 212 PYVTGNSVIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEI 391 P+ G ++I + Y GV++ D+ S G + ++ ++I ++ + + SG +D Q + Sbjct: 8 PHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADSQVV 67 Query: 392 LRYLDELTLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDE 571 Y+ L+ H G K + + YN +N + Sbjct: 68 SDYV-RYFLHQHTIQHGQPATVKVSANLIRMLAYNNKNMLQT----------GLIVGGWD 116 Query: 572 KYLGM----VNMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLL 739 KY G + + GT E+ G G+ W+++MT EEA +L+ K + + + Sbjct: 117 KYEGGKIYGIPLGGTVVEQPFAIGGSGSSYLYGFFDQAWKDNMTKEEAEQLVVKAVSLAI 176 Query: 740 YRDRSSINKFQIAKITTEGST--IYP 811 RD +S + I +EG T YP Sbjct: 177 ARDGASGGVVRTVIINSEGVTRNFYP 202
>Q9P992:PSMB_METTE Proteasome subunit beta precursor - Methanosarcina thermophila| Length = 210 Score = 52.4 bits (124), Expect = 3e-06 Identities = 47/208 (22%), Positives = 95/208 (45%), Gaps = 3/208 (1%) Frame = +2 Query: 215 YVTGNSVIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEIL 394 Y+ G + + + DG+++A + A+ G + K+ +++ ++ + +G D Q+++ Sbjct: 6 YLKGTTTVGVVCTDGIVLASEQRATMGHFIASKTAKKVYQIDDLVGMTTAGSVGDAQQLV 65 Query: 395 RYLDELTLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEK 574 R + + M D S+ K I ++ + RN++ P+ D+ Sbjct: 66 RLVSVESQLYKMRRD-ESMTIKGITTLMSNFL--SRNRYYPMM------VQLLIGGVDKN 116 Query: 575 YLGMVNM--IGTHFEENHI-ATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYR 745 G+ ++ +G EE I ATG G+ MA +L ++RE+MT +E + L + + R Sbjct: 117 GPGIYSLDAMGGSIEETRISATGSGSPMAYGVLEDQYRENMTVKEGLDLAIRAIHNATKR 176 Query: 746 DRSSINKFQIAKITTEGSTIYPPYALKT 829 D +S + IT E P +K+ Sbjct: 177 DSASGENIDVVVITKEAFKRLDPEEVKS 204
>P93395:PSB6_TOBAC Proteasome subunit beta type 6 precursor - Nicotiana tabacum| (Common tobacco) Length = 234 Score = 52.0 bits (123), Expect = 4e-06 Identities = 48/201 (23%), Positives = 87/201 (43%), Gaps = 4/201 (1%) Frame = +2 Query: 212 PYVTGNSVIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEI 391 P+ G ++I + Y GV++ D+ S G + ++ ++I ++ + + SG +D Q + Sbjct: 9 PHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADSQIV 68 Query: 392 LRYLDELTLNDHMWDDGNSLGPKEIHAYLTRVM-YNRRNKFDPLWNSXXXXXXXXXXXXD 568 Y+ L+ H G K + A LTR++ YN +++ D Sbjct: 69 SDYV-RYFLHQHTIQLGQPATVK-VAANLTRLLSYNNKDRLQT---------GMIIGGWD 117 Query: 569 EKYLGMVNMI---GTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLL 739 + G + I GT E+ G G+ W+E MT EEA KL+ + + + Sbjct: 118 KYEGGKIYGIPPGGTVLEQPFAIGGSGSSYLYGFFDQAWKEGMTQEEAEKLVVTAVSLAI 177 Query: 740 YRDRSSINKFQIAKITTEGST 802 RD +S + I +G+T Sbjct: 178 ARDGASGGVVRTVTINKDGAT 198
>O27270:PSMB_METTH Proteasome subunit beta precursor - Methanobacterium| thermoautotrophicum Length = 210 Score = 51.2 bits (121), Expect = 7e-06 Identities = 41/193 (21%), Positives = 88/193 (45%), Gaps = 3/193 (1%) Frame = +2 Query: 224 GNSVIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYL 403 G + + + KDGV+ A + AS G+ + +K+ ++I ++ +H +G +D Q +++YL Sbjct: 9 GTTTVGITCKDGVVFATERRASMGNLIAHKATDKIFKIDEHIAATIAGSVADAQSLMKYL 68 Query: 404 D-ELTLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYL 580 E L + + + + A ++++ R F P DE Sbjct: 69 KAEAAL--YRMRNSEKISIEAAAALAANILHSSR--FYPF------IVQTLLGGVDENGA 118 Query: 581 GMVNM--IGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRS 754 + ++ G + ++TG G+ +A +L + +++ +EAV + + + + RD Sbjct: 119 KIYSLDPSGGMIPDKFVSTGSGSPVAYGVLEDRYSDELYVDEAVDVAIRAIKSAMERDTY 178 Query: 755 SINKFQIAKITTE 793 S N +A +T E Sbjct: 179 SGNGILVATVTEE 191
>Q9P996:PSMB_ARCFU Proteasome subunit beta precursor - Archaeoglobus fulgidus| Length = 213 Score = 50.4 bits (119), Expect = 1e-05 Identities = 46/199 (23%), Positives = 87/199 (43%), Gaps = 2/199 (1%) Frame = +2 Query: 224 GNSVIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYL 403 G + + + KDGV+MA + A+ G+ + K+ ++I ++ + +G D Q + R + Sbjct: 11 GTTTVGLVCKDGVVMATEKRATMGNFIASKAAKKIYQIADRMAMTTAGSVGDAQFLARII 70 Query: 404 DELTLNDHMWDDGNSLGPK-EIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYL 580 + ++++ P A LT + N F L + K + Sbjct: 71 K---IEANLYEIRRERKPTVRAIATLTSNLLNSYRYFPYL-----VQLLIGGIDSEGKSI 122 Query: 581 GMVNMIGTHFEENHI-ATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSS 757 ++ IG EE I ATG G+ A +L + ++ +EAV+L + + + RD +S Sbjct: 123 YSIDPIGGAIEEKDIVATGSGSLTAYGVLEDRFTPEIGVDEAVELAVRAIYSAMKRDSAS 182 Query: 758 INKFQIAKITTEGSTIYPP 814 + + KIT + Y P Sbjct: 183 GDGIDVVKITEDEFYQYSP 201
>Q9LST6:PSB2_ORYSJ Proteasome subunit beta type 2 - Oryza sativa subsp. japonica| (Rice) Length = 212 Score = 49.7 bits (117), Expect = 2e-05 Identities = 43/193 (22%), Positives = 83/193 (43%), Gaps = 1/193 (0%) Frame = +2 Query: 233 VIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDEL 412 VI + +D ++A DT A + +++ + H L+G SGE D + ++ + Sbjct: 4 VIGVVGRDFAVVAADTSAVQSILVHKTDEDKVMVLDSHKLMGASGEPGDRVQFTEFIQK- 62 Query: 413 TLNDHMWDDGNSLG-PKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYLGMV 589 N H++ N++ A TR + +P + + Y + Sbjct: 63 --NLHLYQFRNNIPLSTAATANFTRGELATALRKNPYYVNVLLAGYDSDVGASLYY---I 117 Query: 590 NMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKF 769 + I T + A G+G++ + ++ +R DM+ EEAV L++KC+ + R + F Sbjct: 118 DYIATFHKIEKGAFGYGSYFCLSLMDKLYRPDMSVEEAVDLVDKCIKEIRLRLVVAPQNF 177 Query: 770 QIAKITTEGSTIY 808 I + EG+ Y Sbjct: 178 IIKIVDKEGAREY 190
>A5DB52:PSB2_PICGU Probable proteasome subunit beta type 2 - Pichia guilliermondii| (Yeast) (Candida guilliermondii) Length = 194 Score = 49.3 bits (116), Expect = 3e-05 Identities = 36/188 (19%), Positives = 77/188 (40%) Frame = +2 Query: 233 VIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDEL 412 V+ ++ +D ++A A+ G ++ + ++ +++ H+L+ SGE D + Y+ Sbjct: 4 VLGIRVEDCTLVATSKAATRGISVLKDTDDKTRQLNSHNLMAYSGEAGDTVQFAEYIQAN 63 Query: 413 TLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYLGMVN 592 T M ++ L PK +++ + P + L ++ Sbjct: 64 TQLYTMRENDTELSPKATASFVRNQLATSIRSRKPY--QVNVLLAGYDTNTGKPSLNWID 121 Query: 593 MIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQ 772 +GT E + A G+ +L +++ M FE+ + L++KC+ L R Sbjct: 122 YLGTQVELPYAAHGYAGFYCTSLLDKHYKKGMNFEDGLDLLKKCIKELETRMPIDFKGCY 181 Query: 773 IAKITTEG 796 I + EG Sbjct: 182 IKVVDKEG 189
>O23714:PSB2A_ARATH Proteasome subunit beta type 2-A - Arabidopsis thaliana (Mouse-ear| cress) Length = 204 Score = 48.1 bits (113), Expect = 6e-05 Identities = 41/184 (22%), Positives = 79/184 (42%), Gaps = 2/184 (1%) Frame = +2 Query: 263 IMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDELTLNDHMWDDG 442 I+A DT A + L + ++I + H L+ SGE D + Y+ + N ++ Sbjct: 14 IVAADTSAVHSILLHKNNEDKIMVLDSHKLVAASGEPGDRVQFTEYVQK---NVSLYKFR 70 Query: 443 NSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYLGM--VNMIGTHFEE 616 N + A + R L + DE + ++ I T + Sbjct: 71 NGIPLTTAAA----ANFTRGELATALRKNPYSVNILMAGYDDESGASLYYIDYIATLHKV 126 Query: 617 NHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQIAKITTEG 796 + A G+G++ ++ + +R DM+ EEA++L++KC+L + R + F I + +G Sbjct: 127 DKGAFGYGSYFSLSTMDRHYRSDMSVEEAIELVDKCILEIRSRLVVAPPNFVIKIVDKDG 186 Query: 797 STIY 808 + Y Sbjct: 187 ARDY 190
>P28064:PSB8_RAT Proteasome subunit beta type 8 precursor - Rattus norvegicus (Rat)| Length = 276 Score = 47.8 bits (112), Expect = 8e-05 Identities = 47/194 (24%), Positives = 83/194 (42%), Gaps = 8/194 (4%) Frame = +2 Query: 224 GNSVIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYL 403 G + +A K++ GVI+A D+ AS GS + V ++ E+ + L SG +D Q Y Sbjct: 72 GTTTLAFKFQHGVIVAVDSRASAGSYIATIRVNKVIEINPYLLGTMSGCAADCQ----YW 127 Query: 404 DELTLND---HMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEK 574 + L + + +G + L+ +M R D+K Sbjct: 128 ERLLAKECRLYYLRNGERISVSAASKLLSNMMLQYRGM--------GLSMGSMICGWDKK 179 Query: 575 YLGM--VNMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRD 748 G+ V+ GT +TG GN A ++ +R+D++ EEA L + ++ +RD Sbjct: 180 GPGLYYVDDNGTRLSGQMFSTGSGNTYAYGVMDSGYRQDLSPEEAYDLARRAIVYATHRD 239 Query: 749 RSS---INKFQIAK 781 S +N + + K Sbjct: 240 SYSGGVVNMYHMKK 253
>P25043:PSB7_YEAST Proteasome component PUP1 precursor - Saccharomyces cerevisiae| (Baker's yeast) Length = 261 Score = 47.8 bits (112), Expect = 8e-05 Identities = 34/179 (18%), Positives = 79/179 (44%) Frame = +2 Query: 221 TGNSVIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRY 400 TG +++ +K+ +GV++A DT ++ G + K+ ++ + G+G +D + + + Sbjct: 28 TGTTIVGVKFNNGVVIAADTRSTQGPIVADKNCAKLHRISPKIWCAGAGTAADTEAVTQL 87 Query: 401 LDELTLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYL 580 + N + S P+ + A +++ K+ +L Sbjct: 88 IGS---NIELHSLYTSREPRVVSA--LQMLKQHLFKYQ---GHIGAYLIVAGVDPTGSHL 139 Query: 581 GMVNMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSS 757 ++ G+ +++ G G+ A+ +L W++D+T EEA+KL + ++ D S Sbjct: 140 FSIHAHGSTDVGYYLSLGSGSLAAMAVLESHWKQDLTKEEAIKLASDAIQAGIWNDLGS 198
>O24361:PSB5_SPIOL Proteasome subunit beta type 5 precursor - Spinacia oleracea| (Spinach) Length = 272 Score = 47.8 bits (112), Expect = 8e-05 Identities = 46/193 (23%), Positives = 80/193 (41%), Gaps = 2/193 (1%) Frame = +2 Query: 224 GNSVIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYL 403 G + +A +K GV++A D+ AS G + +SV++I E+ + L +G +D Q R L Sbjct: 55 GTTTLAFIFKHGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114 Query: 404 DELTLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYLG 583 + H + + L ++YN R DE G Sbjct: 115 G-IKCRLHELANKRRISVTGASKLLANILYNYRGM--------GLSVGTMIAGWDETGPG 165 Query: 584 M--VNMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSS 757 + V+ G + + G G+ A +L ++ DMT EEA +L + + YRD +S Sbjct: 166 LYYVDSEGGRLKGMRFSVGSGSPYAYGVLDNGYKYDMTVEEASELARRAIYHATYRDGAS 225 Query: 758 INKFQIAKITTEG 796 + + +G Sbjct: 226 GGVVSVYHVGPDG 238
>Q00826:PSB2_CRYNE Probable proteasome subunit beta type 2 - Cryptococcus neoformans| (Filobasidiella neoformans) Length = 224 Score = 47.4 bits (111), Expect = 1e-04 Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 3/162 (1%) Frame = +2 Query: 251 KDGVIMACDTGASYGSTLRYKSVE-RIKEVGKHSLIGGSGEFSDFQEILRYLDELTLNDH 427 KD VI+A D GA S +R KS E ++K +G H + SGE D Y++ N Sbjct: 10 KDYVILASDMGAGR-SIVRMKSDENKLKTLGPHLAMAFSGEPGDTNNFAEYIER---NMR 65 Query: 428 MWDDGNS--LGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYLGMVNMIG 601 +++ N L P A++ R + P + + +L ++ +G Sbjct: 66 LYNIRNHFPLLPPAASAWVRRTLAEAIRSRHPY--AVNLLLGGFDTTTSKPHLYWIDYLG 123 Query: 602 THFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCL 727 T + A G G ++++ + W EDM +E V L+ KC+ Sbjct: 124 TKAIVPYAAHGMGVYVSLSTMDKWWYEDMDKKEGVDLLRKCI 165
>Q9JHW0:PSB7_RAT Proteasome subunit beta type 7 precursor - Rattus norvegicus (Rat)| Length = 277 Score = 47.0 bits (110), Expect = 1e-04 Identities = 46/216 (21%), Positives = 84/216 (38%), Gaps = 10/216 (4%) Frame = +2 Query: 221 TGNSVIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRY 400 TG ++ + YKDG+++ DT A+ G + K+ +I + + G+G +D ++ Sbjct: 42 TGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAAD-TDMTTQ 100 Query: 401 LDELTLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYL 580 L L H G L RV+ R L+ L Sbjct: 101 LISSNLELHSLTTGR----------LPRVVTANRMLKQMLFRYQGYIGAAL-------VL 143 Query: 581 GMVNMIGTHF----------EENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLL 730 G V++ G H + ++ G G+ A+ + ++R DM EEA KL+ + + Sbjct: 144 GGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKKLVSEAIA 203 Query: 731 VLLYRDRSSINKFQIAKITTEGSTIYPPYALKTNWG 838 ++ D S + + I+ PY++ G Sbjct: 204 AGIFNDLGSGSNIDLCVISKSKLDFLRPYSVPNKKG 239
>O24633:PSB2B_ARATH Proteasome subunit beta type 2-B - Arabidopsis thaliana (Mouse-ear| cress) Length = 199 Score = 47.0 bits (110), Expect = 1e-04 Identities = 41/182 (22%), Positives = 80/182 (43%) Frame = +2 Query: 263 IMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDELTLNDHMWDDG 442 I+A DT A + L ++I + H L+ SGE D + Y+ + ++ + + +G Sbjct: 14 IVAADTSAVHSILLHKNKEDKIMTLDSHKLVAASGEPGDRVQFTEYVQK-NVSLYQFRNG 72 Query: 443 NSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYLGMVNMIGTHFEENH 622 L A TR + +P + Y ++ I T + + Sbjct: 73 IPLSTAAA-ANFTRGELATALRKNPYSVNILMAGYDKEAGASLYY---IDYIATLHKVDK 128 Query: 623 IATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQIAKITTEGST 802 A G+G++ ++ + +R DM+ EEA++L++KC+L + R + F I + +G+ Sbjct: 129 GAFGYGSYFSLSTMDRHYRSDMSVEEAIELVDKCILEIRSRLVIAPPNFVIKIVDKDGAR 188 Query: 803 IY 808 Y Sbjct: 189 EY 190
>O43063:PSB6_SCHPO Probable proteasome subunit beta type 6 precursor -| Schizosaccharomyces pombe (Fission yeast) Length = 226 Score = 46.6 bits (109), Expect = 2e-04 Identities = 42/194 (21%), Positives = 83/194 (42%), Gaps = 3/194 (1%) Frame = +2 Query: 224 GNSVIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYL 403 G ++ A++YKDGVI+A D+ + G+ + + +++ ++ + SG +D Q + L Sbjct: 24 GTTITALRYKDGVILAADSRTTMGAYIANRVTDKLTQLTDNIWCCRSGSAADTQTVADLL 83 Query: 404 DELTLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYLG 583 + L+ + G+ + + Y +N DEK G Sbjct: 84 -KYYLSMYRIQFGHDPSVHTAATLASEMCYQNKNMLS---------AGLIVAGYDEKTGG 133 Query: 584 MVNMI---GTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRS 754 V I G+ ++ G G+ +RE+MT EEAV+ ++ + + + RD S Sbjct: 134 DVYSIPLGGSLHKQPLAIGGSGSAFIYGFCDANFRENMTQEEAVEFLKNAVALAMERDGS 193 Query: 755 SINKFQIAKITTEG 796 S ++ + +G Sbjct: 194 SGGTIRMVILNKDG 207
>P22141:PSB2_YEAST Proteasome component C11 - Saccharomyces cerevisiae (Baker's yeast)| Length = 198 Score = 46.6 bits (109), Expect = 2e-04 Identities = 31/165 (18%), Positives = 73/165 (44%) Frame = +2 Query: 233 VIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDEL 412 ++ ++ +D VI+A + G ++ S ++ +++ H+L+ +GE D + Y+ + Sbjct: 4 ILGIRVQDSVILASSKAVTRGISVLKDSDDKTRQLSPHTLMSFAGEAGDTVQFAEYI-QA 62 Query: 413 TLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYLGMVN 592 + + + L P+ + +++ + + P + E Y ++ Sbjct: 63 NIQLYSIREDYELSPQAVSSFVRQELAKSIRSRRPYQVNVLIGGYDKKKNKPELY--QID 120 Query: 593 MIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCL 727 +GT E + A G+ +L +R DMT EE + L++ C+ Sbjct: 121 YLGTKVELPYGAHGYSGFYTFSLLDHHYRPDMTTEEGLDLLKLCV 165
>P70195:PSB7_MOUSE Proteasome subunit beta type 7 precursor - Mus musculus (Mouse)| Length = 277 Score = 45.4 bits (106), Expect = 4e-04 Identities = 45/216 (20%), Positives = 84/216 (38%), Gaps = 10/216 (4%) Frame = +2 Query: 221 TGNSVIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRY 400 TG ++ + YKDG+++ DT A+ G + K+ +I + + G+G +D ++ Sbjct: 42 TGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAAD-TDMTTQ 100 Query: 401 LDELTLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYL 580 L L H G L RV+ R L+ L Sbjct: 101 LISSNLELHSLTTGR----------LPRVVTANRMLKQMLFRYQGYIGAAL-------VL 143 Query: 581 GMVNMIGTHF----------EENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLL 730 G V++ G H + ++ G G+ A+ + ++R DM EEA KL+ + + Sbjct: 144 GGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKKLVSEAIA 203 Query: 731 VLLYRDRSSINKFQIAKITTEGSTIYPPYALKTNWG 838 ++ D S + + I+ P+++ G Sbjct: 204 AGIFNDLGSGSNIDLCVISKSKLDFLRPFSVPNKKG 239
>Q7DLS1:PSB7B_ARATH Proteasome subunit beta type 7-B precursor - Arabidopsis thaliana| (Mouse-ear cress) Length = 274 Score = 45.4 bits (106), Expect = 4e-04 Identities = 39/199 (19%), Positives = 80/199 (40%), Gaps = 10/199 (5%) Frame = +2 Query: 221 TGNSVIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRY 400 TG +++ + +KDGVI+ DT A+ G + K+ E+I + + G+G +D + + Sbjct: 38 TGTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDM 97 Query: 401 LDELTLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYL 580 + L H + G L + +++ + L Sbjct: 98 VSS-QLRLHRYQTGRDSRVVTALTLLKKHLFSYQGHVSA-----------------ALVL 139 Query: 581 GMVNMIGTHFEENH----------IATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLL 730 G V++ G H + G G+ A+ + +++E +T +E +KL+ + + Sbjct: 140 GGVDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAEAIC 199 Query: 731 VLLYRDRSSINKFQIAKIT 787 ++ D S + I IT Sbjct: 200 SGIFNDLGSGSNVDICVIT 218
>Q3T112:PSB8_BOVIN Proteasome subunit beta type 8 precursor - Bos taurus (Bovine)| Length = 276 Score = 45.1 bits (105), Expect = 5e-04 Identities = 44/183 (24%), Positives = 77/183 (42%), Gaps = 5/183 (2%) Frame = +2 Query: 224 GNSVIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYL 403 G + +A K++ GVI+A D+ AS G+ + V ++ E+ + L SG +D Y Sbjct: 72 GTTTLAFKFQHGVIVAVDSRASAGNYIATLKVNKVIEINPYLLGTMSGCAAD----CLYW 127 Query: 404 DELTLND---HMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEK 574 + L + + +G + L+ +M R D+K Sbjct: 128 ERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGM--------GLSMGSMICGWDKK 179 Query: 575 YLGM--VNMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRD 748 G+ V+ GT N +TG GN A ++ +R D++ EEA L + ++ +RD Sbjct: 180 GPGLYYVDENGTRLSGNMFSTGSGNSHAYGVMDSGYRPDLSIEEAYDLGRRAIVHATHRD 239 Query: 749 RSS 757 S Sbjct: 240 SYS 242
>Q99436:PSB7_HUMAN Proteasome subunit beta type 7 precursor - Homo sapiens (Human)| Length = 277 Score = 45.1 bits (105), Expect = 5e-04 Identities = 45/216 (20%), Positives = 82/216 (37%), Gaps = 10/216 (4%) Frame = +2 Query: 221 TGNSVIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRY 400 TG ++ + YKDG+++ DT A+ G + K+ +I + + G+G +D ++ Sbjct: 42 TGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAAD-TDMTTQ 100 Query: 401 LDELTLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYL 580 L L H G L RV+ R L+ L Sbjct: 101 LISSNLELHSLSTGR----------LPRVVTANRMLKQMLFRYQGYIGAAL-------VL 143 Query: 581 GMVNMIGTHF----------EENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLL 730 G V++ G H + ++ G G+ A+ + ++R DM EEA L+ + + Sbjct: 144 GGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKNLVSEAIA 203 Query: 731 VLLYRDRSSINKFQIAKITTEGSTIYPPYALKTNWG 838 ++ D S + + I+ PY + G Sbjct: 204 AGIFNDLGSGSNIDLCVISKNKLDFLRPYTVPNKKG 239
>O23710:PSB7A_ARATH Proteasome subunit beta type 7-A precursor - Arabidopsis thaliana| (Mouse-ear cress) Length = 273 Score = 44.7 bits (104), Expect = 6e-04 Identities = 40/199 (20%), Positives = 81/199 (40%), Gaps = 10/199 (5%) Frame = +2 Query: 221 TGNSVIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRY 400 TG +++ + +KDGVI+ DT A+ G + K+ E+I + + G+G +D + + Sbjct: 38 TGTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDM 97 Query: 401 LDELTLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYL 580 + L H + G +T + +++ F L Sbjct: 98 VSS-QLRLHRYQTGRD------SRVITALTLLKKHLFS-----------YQGHVSAALVL 139 Query: 581 GMVNMIGTHFEENH----------IATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLL 730 G V++ G H + G G+ A+ + +++E +T +E +KL+ + + Sbjct: 140 GGVDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAESIC 199 Query: 731 VLLYRDRSSINKFQIAKIT 787 ++ D S + I IT Sbjct: 200 SGIFNDLGSGSNVDICVIT 218
>P28062:PSB8_HUMAN Proteasome subunit beta type 8 precursor - Homo sapiens (Human)| Length = 276 Score = 43.9 bits (102), Expect = 0.001 Identities = 45/183 (24%), Positives = 76/183 (41%), Gaps = 5/183 (2%) Frame = +2 Query: 224 GNSVIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYL 403 G + +A K++ GVI A D+ AS GS + V ++ E+ + L SG +D Q Y Sbjct: 72 GTTTLAFKFQHGVIAAVDSRASAGSYISALRVNKVIEINPYLLGTMSGCAADCQ----YW 127 Query: 404 DELTLND---HMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEK 574 + L + + +G + L+ +M R D+K Sbjct: 128 ERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGM--------GLSMGSMICGWDKK 179 Query: 575 YLGM--VNMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRD 748 G+ V+ GT N +TG GN A ++ +R +++ EEA L + + +RD Sbjct: 180 GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIAYATHRD 239 Query: 749 RSS 757 S Sbjct: 240 SYS 242
>P28063:PSB8_MOUSE Proteasome subunit beta type 8 precursor - Mus musculus (Mouse)| Length = 276 Score = 43.5 bits (101), Expect = 0.001 Identities = 43/183 (23%), Positives = 77/183 (42%), Gaps = 5/183 (2%) Frame = +2 Query: 224 GNSVIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYL 403 G + +A K++ GVI+A D+ A+ GS + + ++ E+ + L SG +D Q Y Sbjct: 72 GTTTLAFKFQHGVIVAVDSRATAGSYISSLRMNKVIEINPYLLGTMSGCAADCQ----YW 127 Query: 404 DELTLND---HMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEK 574 + L + + +G + L+ +M R D+K Sbjct: 128 ERLLAKECRLYYLRNGERISVSAASKLLSNMMLQYRGM--------GLSMGSMICGWDKK 179 Query: 575 YLGM--VNMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRD 748 G+ V+ GT +TG GN A ++ +R+D++ EEA L + + +RD Sbjct: 180 GPGLYYVDDNGTRLSGQMFSTGSGNTYAYGVMDSGYRQDLSPEEAYDLGRRAIAYATHRD 239 Query: 749 RSS 757 S Sbjct: 240 NYS 242
>Q5W416:PSB8_CANFA Proteasome subunit beta type 8 precursor - Canis familiaris (Dog)| Length = 276 Score = 42.4 bits (98), Expect = 0.003 Identities = 42/185 (22%), Positives = 78/185 (42%), Gaps = 5/185 (2%) Frame = +2 Query: 218 VTGNSVIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILR 397 V G + +A K++ GVI+A D+ A+ G+ + V ++ E+ L SG +D Q Sbjct: 70 VHGTTTLAFKFQHGVIVAVDSRATAGNYISSSRVNKVIEINPSLLGTMSGCAADCQ---- 125 Query: 398 YLDELTLND---HMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXD 568 Y + L + + +G + L+ ++Y R D Sbjct: 126 YWERLLAKECRLYYLRNGERISVSAASKLLSNMVYQYRGM--------DLSMGSMICGWD 177 Query: 569 EKYLGM--VNMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLY 742 +K G+ V+ GT N +TG G+ A ++ ++ ++ EEA +L + + + Sbjct: 178 KKGPGLYYVDQNGTRLSGNMFSTGSGSTYAYGVMDSGYQPSLSPEEAYELGRRAITYATH 237 Query: 743 RDRSS 757 RD S Sbjct: 238 RDSYS 242
>Q9UT97:PSA5_SCHPO Probable proteasome subunit alpha type 5 - Schizosaccharomyces| pombe (Fission yeast) Length = 247 Score = 42.0 bits (97), Expect = 0.004 Identities = 49/194 (25%), Positives = 78/194 (40%), Gaps = 3/194 (1%) Frame = +2 Query: 224 GNSVIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYL 403 G++ I +K KD V++ + + + SVE++ E+ H SG +D + I+ + Sbjct: 34 GSTAIGVKTKDAVVLGVEKRLT-SPLMESHSVEKLFEIDSHIGCAISGLTADARTIIEHA 92 Query: 404 DELTLNDHM-WDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEK-- 574 T N +D+ + + + + S DE Sbjct: 93 RVQTQNHRFTYDEPQGIESTTQSICDLALRFGEGEDGEERIMSRPFGVALLIAGIDEHGP 152 Query: 575 YLGMVNMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRS 754 L GT+F A G G+ A L E+ +DMT EEA LI K L ++ Sbjct: 153 QLYHSEPSGTYFRYEAKAIGSGSEPAKSELVKEFHKDMTLEEAEVLILKVLRQVMEEKLD 212 Query: 755 SINKFQIAKITTEG 796 S N Q+AK+T EG Sbjct: 213 SKN-VQLAKVTAEG 225
>Q9V122:PSMA_PYRAB Proteasome alpha subunit - Pyrococcus abyssi| Length = 260 Score = 41.2 bits (95), Expect = 0.007 Identities = 40/190 (21%), Positives = 79/190 (41%) Frame = +2 Query: 224 GNSVIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYL 403 G + + +K KDGV++A + + + +S E+I ++ H SG +D + ++ Sbjct: 36 GATAVGVKCKDGVVLAVEKRIT-SRLIEPESYEKIFQIDDHIAAASSGIIADARVLVNRA 94 Query: 404 DELTLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYLG 583 L H G P + + ++ ++ D+ L Sbjct: 95 -RLEAQIHRLTYGE---PAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAGVNDKPELY 150 Query: 584 MVNMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSIN 763 + G +F +A G G + A+ I ++R+DMT +EA+KL L + ++ S Sbjct: 151 ETDPSGAYFAWKAVAIGSGRNTAMAIFEDKYRDDMTLDEAIKLAIFALAKTM--EKPSAE 208 Query: 764 KFQIAKITTE 793 ++A IT + Sbjct: 209 NIEVAVITVK 218
>O35955:PSB10_MOUSE Proteasome subunit beta type 10 precursor - Mus musculus (Mouse)| Length = 273 Score = 40.8 bits (94), Expect = 0.009 Identities = 42/195 (21%), Positives = 77/195 (39%) Frame = +2 Query: 221 TGNSVIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRY 400 TG ++ + ++DGVI+ DT A+ S + KS E+I + G+G +D + R Sbjct: 38 TGTTIAGLVFRDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCGAGVAADTEMTTR- 96 Query: 401 LDELTLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYL 580 M S G + A +TR++ ++ + L Sbjct: 97 ----MAASKMELHALSTGREPRVATVTRILRQTLFRYQ---GHVGASLVVGGVDLNGPQL 149 Query: 581 GMVNMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSI 760 V+ G++ A G G A+ +L ++ +MT E A +L+ + + + D S Sbjct: 150 YEVHPHGSYSRLPFTALGSGQGAAVALLEDRFQPNMTLEAAQELLVEAITAGILSDLGSG 209 Query: 761 NKFQIAKITTEGSTI 805 IT G+ + Sbjct: 210 GNVDACVITAGGAKL 224
>P40306:PSB10_HUMAN Proteasome subunit beta type 10 precursor - Homo sapiens (Human)| Length = 273 Score = 39.7 bits (91), Expect = 0.021 Identities = 44/195 (22%), Positives = 79/195 (40%) Frame = +2 Query: 221 TGNSVIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRY 400 TG ++ + ++DGVI+ DT A+ S + KS E+I + G+G +D + R Sbjct: 38 TGTTIAGLVFQDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCGAGVAADAEMTTR- 96 Query: 401 LDELTLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYL 580 + M S G + A +TR++ R+ F + + Sbjct: 97 ----MVASKMELHALSTGREPRVATVTRIL--RQTLFRYQGHVGASLIVGGVDLTGPQLY 150 Query: 581 GMVNMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSI 760 G V+ G++ A G G A+ +L ++ +MT E A L+ + + + D S Sbjct: 151 G-VHPHGSYSRLPFTALGSGQDAALAVLEDRFQPNMTLEAAQGLLVEAVTAGILGDLGSG 209 Query: 761 NKFQIAKITTEGSTI 805 IT G+ + Sbjct: 210 GNVDACVITKTGAKL 224
>Q9P6U7:PSB2_NEUCR Probable proteasome subunit beta type 2 - Neurospora crassa| Length = 203 Score = 38.5 bits (88), Expect = 0.046 Identities = 34/182 (18%), Positives = 69/182 (37%) Frame = +2 Query: 251 KDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDELTLNDHM 430 KD I+A A G+T+ S ++ + + KH+L+ SGE D + Y + + Sbjct: 10 KDFTIIAASKAAMRGATILKASDDKTRSLNKHTLMAFSGEAGDTVQFAEY-TQANAQLYS 68 Query: 431 WDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYLGMVNMIGTHF 610 +G L P + ++ + P + + L ++ + + Sbjct: 69 MRNGTDLSPSALANFVRGELATSLRSRKPY--NVNLLLGGVDPITHKPSLYWLDYLASLA 126 Query: 611 EENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQIAKITT 790 + + A G+ + + IL D+T + +KL+ C L R + +T Sbjct: 127 KVPYAAHGYAQYYCLSILDKHHHPDITLHQGIKLLNLCTDELKRRLPIDFKGMTVKAVTK 186 Query: 791 EG 796 +G Sbjct: 187 DG 188
>Q3T0T1:PSB10_BOVIN Proteasome subunit beta type 10 precursor - Bos taurus (Bovine)| Length = 273 Score = 38.1 bits (87), Expect = 0.061 Identities = 39/193 (20%), Positives = 72/193 (37%) Frame = +2 Query: 221 TGNSVIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRY 400 TG ++ + ++DGVI+ DT A+ S + K E+I + G+G +D E+ Sbjct: 38 TGTTIAGLVFQDGVILGADTRATNDSVVADKICEKIHFIAPKIYCCGAGVAAD-AEMTTR 96 Query: 401 LDELTLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYL 580 + + H G + L + ++ + L Sbjct: 97 MAASNMELHALSTGRECRVATVTRMLRQTLFRYQ-------GYVGASLIVGGVDFTGPQL 149 Query: 581 GMVNMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSI 760 V+ G++ A G G AI +L ++ +MT E A +L+ + + + D S Sbjct: 150 YSVHPHGSYSRLPFTALGSGQDAAIAVLEDRFQPNMTLEAAQELLVEAITAGILGDLGSG 209 Query: 761 NKFQIAKITTEGS 799 IT G+ Sbjct: 210 GNVDACVITAAGA 222
>Q8TYB7:PSMA_METKA Proteasome alpha subunit - Methanopyrus kandleri| Length = 246 Score = 36.2 bits (82), Expect = 0.23 Identities = 20/66 (30%), Positives = 34/66 (51%) Frame = +2 Query: 599 GTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQIA 778 G E A G G A+ + E+REDMT +EA++L + L R+ ++ + +IA Sbjct: 157 GALTEHKATAIGEGRQEALDVFEEEYREDMTLQEAIELAVRALYE-ASREETTADNLEIA 215 Query: 779 KITTEG 796 + +G Sbjct: 216 VVDKQG 221
>Q9VQE5:PSB2_DROME Probable proteasome subunit beta type 2 - Drosophila melanogaster| (Fruit fly) Length = 210 Score = 35.8 bits (81), Expect = 0.30 Identities = 36/193 (18%), Positives = 78/193 (40%), Gaps = 4/193 (2%) Frame = +2 Query: 230 SVIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDE 409 +++ +K D V++A DT + +I + +++ G+ D +++ D Sbjct: 5 TILGIKGPDFVMLASDTMQAKSLVFMKDDQSKIHRLSDFNMMATVGDGGD---TIQFTDF 61 Query: 410 LTLNDHMW--DDGNSLGPKEIHAYLTRVM--YNRRNKFDPLWNSXXXXXXXXXXXXDEKY 577 ++ N H++ G L K + + + Y R N + Sbjct: 62 ISKNLHLYKISHGYHLSAKSAAHFTRKTLADYIRTNT-----RYQVAMLLAGYDAVEGPD 116 Query: 578 LGMVNMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSS 757 L ++ G NH G+G+ IL+ W ++ E+A L++KC+L + R + Sbjct: 117 LHYIDSYGAAQSINHAGHGWGSMFCGSILQRYWNSKLSQEDAYSLMKKCVLEIQRRLIIN 176 Query: 758 INKFQIAKITTEG 796 F++ + ++G Sbjct: 177 QRNFEVYVVDSKG 189
>Q8U0L6:PSMA_PYRFU Proteasome alpha subunit - Pyrococcus furiosus| Length = 260 Score = 35.4 bits (80), Expect = 0.39 Identities = 19/65 (29%), Positives = 34/65 (52%) Frame = +2 Query: 599 GTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQIA 778 G +F +A G G + A+ I ++R+DM E+A+KL L + + S + ++A Sbjct: 156 GAYFAWKAVAIGSGRNTAMAIFEEKYRDDMNLEDAIKLALMALAKTM--ENPSADNIEVA 213 Query: 779 KITTE 793 IT + Sbjct: 214 VITVK 218
>O59219:PSMA_PYRHO Proteasome alpha subunit - Pyrococcus horikoshii| Length = 260 Score = 35.0 bits (79), Expect = 0.51 Identities = 19/65 (29%), Positives = 35/65 (53%) Frame = +2 Query: 599 GTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQIA 778 G +F +A G G + A+ I ++++DM+ EEA+KL L + ++ S ++A Sbjct: 156 GAYFAWKAVAIGSGRNTAMAIFEEKYKDDMSLEEAIKLAIFALAKTM--EKPSAENIEVA 213 Query: 779 KITTE 793 IT + Sbjct: 214 IITVK 218
>P91477:PSB2_CAEEL Proteasome subunit beta type 2 - Caenorhabditis elegans| Length = 199 Score = 34.7 bits (78), Expect = 0.67 Identities = 38/192 (19%), Positives = 82/192 (42%), Gaps = 4/192 (2%) Frame = +2 Query: 233 VIAMKYKDGVIMACDTGA-SYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDE 409 ++ + ++ VI+A D +YG+ L ++ +GK + GE D + ++ D Sbjct: 4 LVGISTENYVILAADKATFAYGAILADSENDKEYRLGKKLTMMCIGEEGD---VAQFGDW 60 Query: 410 LTLNDHMWD--DGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYLG 583 N ++ +G + P H ++ R + D + D+ +LG Sbjct: 61 TKRNLQLYSVRNGYEVSPSCAHHFVRRSIAEGLRSQDHY--TVDVLIGGYDDKEDKAFLG 118 Query: 584 MVNMIGTHF-EENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSI 760 V+ + ++ ++ GF I+ E+++DMT E + L+ KC+ R ++I Sbjct: 119 SVDYLANGLGQQPYLFRGFCGRFCYAIMDREYKKDMTEAEGLALMNKCIGEAKRRFVANI 178 Query: 761 NKFQIAKITTEG 796 +++ I +G Sbjct: 179 PGYKVVIIDKKG 190
>P38624:PSB6_YEAST Proteasome component PRE3 precursor - Saccharomyces cerevisiae| (Baker's yeast) Length = 215 Score = 34.3 bits (77), Expect = 0.88 Identities = 42/197 (21%), Positives = 78/197 (39%), Gaps = 6/197 (3%) Frame = +2 Query: 224 GNSVIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQ---EIL 394 G S++A+ +KDGVI+ D+ + G+ + + +++ V SG +D Q +I+ Sbjct: 19 GTSIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDKIWCCRSGSAADTQAIADIV 78 Query: 395 RYLDELTLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEK 574 +Y EL + + + + + + Y N D+K Sbjct: 79 QYHLELYTSQY-----GTPSTETAASVFKELCYE---------NKDNLTAGIIVAGYDDK 124 Query: 575 YLGMVNMI---GTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYR 745 G V I G+ + + G G+ +RE+M+ EE V I+ L + Sbjct: 125 NKGEVYTIPLGGSVHKLPYAIAGSGSTFIYGYCDKNFRENMSKEETVDFIKHSLSQAIKW 184 Query: 746 DRSSINKFQIAKITTEG 796 D SS ++ +T G Sbjct: 185 DGSSGGVIRMVVLTAAG 201
>Q9YC01:PSMA_AERPE Proteasome alpha subunit - Aeropyrum pernix| Length = 258 Score = 33.1 bits (74), Expect = 2.0 Identities = 17/47 (36%), Positives = 24/47 (51%) Frame = +2 Query: 599 GTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLL 739 G +F IA G G +A + +R DM+ EEA KL K L ++ Sbjct: 160 GQYFSFKAIAIGSGEQVANEMFEKHYRSDMSLEEATKLALKILYAII 206
>Q9NHC6:PSB2_TRYBB Proteasome subunit beta type 2 - Trypanosoma brucei brucei| Length = 206 Score = 33.1 bits (74), Expect = 2.0 Identities = 32/165 (19%), Positives = 64/165 (38%), Gaps = 6/165 (3%) Frame = +2 Query: 320 ERIKEVGKHSLIGGSGEFSDFQEILRYLDELTLNDHMWDDGNSLGPKEIHAYLTRVMYNR 499 ++I E+ H ++ +GE + Y+ M + G + +++ + Sbjct: 34 DKITELDSHKVVACAGENGPRTHFVEYVKCNMALKKMREHGRMISTHATASFMRNTLAGA 93 Query: 500 RNKFDPLW--NSXXXXXXXXXXXXDE----KYLGMVNMIGTHFEENHIATGFGNHMAIPI 661 D L+ N D+ +L ++ +GT E + G+G + Sbjct: 94 LRSRDGLYPVNCLLAGFDVPASAEDDVATGAHLYYLDYLGTLQEVPYGCHGYGAPFVTAM 153 Query: 662 LRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQIAKITTEG 796 L WR ++T +E V+L++KC + R S N F + +G Sbjct: 154 LDRMWRPNLTAQEGVELMQKCCDEVNKRVVVSNNTFICKAVPKDG 198
>P79020:PALA_EMENI pH-response regulator protein palA/RIM20 - Emericella nidulans| (Aspergillus nidulans) Length = 847 Score = 32.7 bits (73), Expect = 2.5 Identities = 14/26 (53%), Positives = 18/26 (69%) Frame = +1 Query: 73 PQPQPQPSRGLPPTSETKPHQPPTRT 150 PQPQP PS+ +PP S+ +P P RT Sbjct: 773 PQPQP-PSQAIPPQSQPQPQPQPLRT 797
>Q8WUF5:IASPP_HUMAN RelA-associated inhibitor - Homo sapiens (Human)| Length = 828 Score = 32.7 bits (73), Expect = 2.5 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = +1 Query: 46 RIQRERDHHPQPQPQPSRGLPPTSETKPHQP 138 ++Q + PQPQ QP LPP +T+P P Sbjct: 405 KLQPQPQPQPQPQSQPQPQLPPQPQTQPQTP 435
>Q9R1D1:CTCF_RAT Transcriptional repressor CTCF - Rattus norvegicus (Rat)| Length = 737 Score = 32.7 bits (73), Expect = 2.5 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = +1 Query: 73 PQPQPQPSRGLPPTSETKPHQPPTRTD 153 PQPQPQP PP ++ + +PP RT+ Sbjct: 644 PQPQPQPVAPAPPPAKKRRGRPPGRTN 670
>Q5IS79:ATOH1_PANTR Protein atonal homolog 1 - Pan troglodytes (Chimpanzee)| Length = 356 Score = 32.7 bits (73), Expect = 2.5 Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 2/43 (4%) Frame = +1 Query: 19 LSSLLHEEE--RIQRERDHHPQPQPQPSRGLPPTSETKPHQPP 141 +S LLH EE ++ DHH QPQP LP P QPP Sbjct: 1 MSRLLHAEEWAEVKELGDHHRQPQP---HHLPQPPPPPPPQPP 40
>Q9CR92:CCD96_MOUSE Coiled-coil domain-containing protein 96 - Mus musculus (Mouse)| Length = 584 Score = 32.3 bits (72), Expect = 3.3 Identities = 11/24 (45%), Positives = 19/24 (79%) Frame = +1 Query: 58 ERDHHPQPQPQPSRGLPPTSETKP 129 E++ P+P+P+P++G P SET+P Sbjct: 39 EQEPEPKPEPEPTQGREPESETQP 62
>P46448:FDXG_HAEIN Formate dehydrogenase major subunit - Haemophilus influenzae| Length = 1028 Score = 32.0 bits (71), Expect = 4.3 Identities = 20/47 (42%), Positives = 23/47 (48%), Gaps = 4/47 (8%) Frame = -3 Query: 509 TYCACCTLLLSGRHGFPWGPMSSHHPTYDRSKLIH----PDSAKSPG 381 TYCA +L G P+ +SSH T RSKL H PD S G Sbjct: 51 TYCAVSCGMLLYSTGKPYNSLSSHTGTNTRSKLFHIEGDPDHPVSRG 97
>O24733:PSMA_THEK1 Proteasome alpha subunit - Thermococcus sp. (strain KS-1)| Length = 260 Score = 32.0 bits (71), Expect = 4.3 Identities = 39/191 (20%), Positives = 78/191 (40%), Gaps = 1/191 (0%) Frame = +2 Query: 224 GNSVIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYL 403 G + + +K+KDGV++A + + + S E+I + H SG +D + ++ Sbjct: 36 GATAVGVKWKDGVVLAVEKRIT-SKLIEPSSYEKIFLIDDHIAAAPSGIIADARVLV--- 91 Query: 404 DELTLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEK-YL 580 D L ++ + G L + + + + +EK L Sbjct: 92 DRARLEAQIYR--LTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGVNEKPEL 149 Query: 581 GMVNMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSI 760 + G +FE +A G G + A+ I +R+D+ ++A+KL L L + + Sbjct: 150 FETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYRDDIGKDDAIKLAILALAKTL--EEPTA 207 Query: 761 NKFQIAKITTE 793 ++A IT + Sbjct: 208 EGIEVAYITMD 218
>Q5JIU9:PSMA_PYRKO Proteasome alpha subunit - Pyrococcus kodakaraensis (Thermococcus| kodakaraensis) Length = 260 Score = 32.0 bits (71), Expect = 4.3 Identities = 39/191 (20%), Positives = 78/191 (40%), Gaps = 1/191 (0%) Frame = +2 Query: 224 GNSVIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYL 403 G + + +K+KDGV++A + + + S E+I + H SG +D + ++ Sbjct: 36 GATAVGVKWKDGVVLAVEKRIT-SKLIEPSSYEKIFLIDDHIAAAPSGIIADARVLV--- 91 Query: 404 DELTLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEK-YL 580 D L ++ + G L + + + + +EK L Sbjct: 92 DRARLEAQIYR--LTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGVNEKPEL 149 Query: 581 GMVNMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSI 760 + G +FE +A G G + A+ I +R+D+ ++A+KL L L + + Sbjct: 150 FETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYRDDIGKDDAIKLAILALAKTL--EEPTA 207 Query: 761 NKFQIAKITTE 793 ++A IT + Sbjct: 208 EGIEVAYITMD 218
>Q8BJI4:PO6F2_MOUSE POU domain, class 6, transcription factor 2 - Mus musculus (Mouse)| Length = 691 Score = 32.0 bits (71), Expect = 4.3 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 6/41 (14%) Frame = +1 Query: 37 EEERIQRERDHHPQP-----QPQPSRGLPPTSE-TKPHQPP 141 ++++ Q+++ P P PQP+ PP S+ T PHQPP Sbjct: 187 QQQQQQQQQQQQPPPPPTSQHPQPASQAPPQSQPTPPHQPP 227
>Q7S532:PALA_NEUCR pH-response regulator protein palA/rim-20 - Neurospora crassa| Length = 886 Score = 32.0 bits (71), Expect = 4.3 Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Frame = +1 Query: 19 LSSL-LHEEERIQRERDHHPQPQPQPSRGLPPTSETKPHQP 138 LSSL +H+ +++ HH QP P P + +P +PHQP Sbjct: 779 LSSLNMHQSSFSYQQQQHHQQPPPPPPQ-IPFPEPIQPHQP 818
>Q61164:CTCF_MOUSE Transcriptional repressor CTCF - Mus musculus (Mouse)| Length = 736 Score = 32.0 bits (71), Expect = 4.3 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 4/43 (9%) Frame = +1 Query: 37 EEERIQRERDHHPQPQP----QPSRGLPPTSETKPHQPPTRTD 153 EE ++ E + PQPQP QP PP ++ + +PP RT+ Sbjct: 627 EEPAVEIEPEPEPQPQPPPPPQPVAPAPPPAKKRRGRPPGRTN 669
>Q92858:ATOH1_HUMAN Protein atonal homolog 1 - Homo sapiens (Human)| Length = 354 Score = 32.0 bits (71), Expect = 4.3 Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 2/43 (4%) Frame = +1 Query: 19 LSSLLHEEE--RIQRERDHHPQPQPQPSRGLPPTSETKPHQPP 141 +S LLH EE ++ DHH QPQP PP P QPP Sbjct: 1 MSRLLHAEEWAEVKELGDHHRQPQPHHLPQPPP-----PPQPP 38
>P20156:VGF_RAT Neurosecretory protein VGF precursor - Rattus norvegicus (Rat)| Length = 617 Score = 31.6 bits (70), Expect = 5.7 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%) Frame = +1 Query: 16 DLSSLLHE-EERIQRERDHHPQPQPQPSRGLPPTSETKPHQPP 141 D+ S++ E EE+ +R+++ P+P P P PT P PP Sbjct: 472 DVVSIIEEVEEKRKRKKNAPPEPVPPPRAAPAPTHVRSPQPPP 514
>Q29576:PSB8_PIG Proteasome subunit beta type 8 - Sus scrofa (Pig)| Length = 104 Score = 31.6 bits (70), Expect = 5.7 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 2/63 (3%) Frame = +2 Query: 566 DEKYLGM--VNMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLL 739 D+K G+ V+ GT N +TG GN A ++ R D++ EEA L + ++ Sbjct: 42 DKKGPGLYYVDENGTRLSGNMFSTGSGNTYAYGVMDSGHRYDLSIEEAYDLGRRAIVHAT 101 Query: 740 YRD 748 +RD Sbjct: 102 HRD 104
>P20799:NO12A_PEA Early nodulin 12A precursor - Pisum sativum (Garden pea)| Length = 110 Score = 31.6 bits (70), Expect = 5.7 Identities = 13/30 (43%), Positives = 16/30 (53%) Frame = +1 Query: 52 QRERDHHPQPQPQPSRGLPPTSETKPHQPP 141 Q+E H PQ +P R PP E H+PP Sbjct: 56 QKETPVHKPPQKEPPRHKPPQKEPPRHKPP 85
>A1YVX4:JAD1C_PIG Histone demethylase JARID1C - Sus scrofa (Pig)| Length = 1516 Score = 31.6 bits (70), Expect = 5.7 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = +1 Query: 34 HEEERIQRERDHHPQPQPQPSRGLPPTSETK 126 HEEE ++ E PQP P+ G P T E + Sbjct: 1449 HEEEELEEETGGEGPPQPLPATGSPSTQENQ 1479
>Q31B97:PURQ_PROM9 Phosphoribosylformylglycinamidine synthase 1 - Prochlorococcus| marinus (strain MIT 9312) Length = 221 Score = 31.2 bits (69), Expect = 7.4 Identities = 16/51 (31%), Positives = 26/51 (50%) Frame = +2 Query: 653 IPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQIAKITTEGSTI 805 +PI GE R + KL++ L+ L Y++ + + F IA IT E + Sbjct: 141 LPIAHGEGRYHCDSDTLKKLVDNELIALRYKNNPNGSSFDIAGITNEKGNV 191
>Q9NSV0:PRR8_HUMAN Proline-rich protein 8 - Homo sapiens (Human)| Length = 439 Score = 31.2 bits (69), Expect = 7.4 Identities = 12/22 (54%), Positives = 13/22 (59%) Frame = +1 Query: 76 QPQPQPSRGLPPTSETKPHQPP 141 QPQPQ + PP PHQPP Sbjct: 35 QPQPQQPQQQPPPQHQPPHQPP 56
>Q8FY11:HSLV_BRUSU ATP-dependent protease hslV - Brucella suis| Length = 184 Score = 31.2 bits (69), Expect = 7.4 Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 2/68 (2%) Frame = +2 Query: 209 NPYVTGNSVIAMKYKDG-VIMACDTGASYGSTLRYKSVERIKEVGKHSLIGG-SGEFSDF 382 NP + I KDG V++A D S G+T+ + +++ +GK ++I G +G +D Sbjct: 5 NPTTIYGTTIVTVRKDGKVVIAGDGQVSLGNTVMKGNARKVRRIGKGNVIAGFAGATADA 64 Query: 383 QEILRYLD 406 +L L+ Sbjct: 65 FTLLERLE 72
>Q8YE31:HSLV_BRUME ATP-dependent protease hslV - Brucella melitensis| Length = 184 Score = 31.2 bits (69), Expect = 7.4 Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 2/68 (2%) Frame = +2 Query: 209 NPYVTGNSVIAMKYKDG-VIMACDTGASYGSTLRYKSVERIKEVGKHSLIGG-SGEFSDF 382 NP + I KDG V++A D S G+T+ + +++ +GK ++I G +G +D Sbjct: 5 NPTTIYGTTIVTVRKDGKVVIAGDGQVSLGNTVMKGNARKVRRIGKGNVIAGFAGATADA 64 Query: 383 QEILRYLD 406 +L L+ Sbjct: 65 FTLLERLE 72
>Q479M6:FPG_DECAR Formamidopyrimidine-DNA glycosylase - Dechloromonas aromatica| (strain RCB) Length = 277 Score = 31.2 bits (69), Expect = 7.4 Identities = 15/48 (31%), Positives = 26/48 (54%) Frame = -2 Query: 729 SKHFSMSLTASSKVMSSRHSPRRIGIAIWFPNPVAM*FSSKCVPIMLT 586 +KH L + +++ PRR G+ +W P P A S++C P++ T Sbjct: 93 AKHDHFELVLAGQILRFA-DPRRFGVVLWQPGPPA---SAECHPLLAT 136
>Q8XKU1:TPIS_CLOPE Triosephosphate isomerase - Clostridium perfringens| Length = 248 Score = 30.8 bits (68), Expect = 9.7 Identities = 12/25 (48%), Positives = 17/25 (68%) Frame = +2 Query: 647 MAIPILRGEWREDMTFEEAVKLIEK 721 M PI+ G W+ T +EAVKL+E+ Sbjct: 1 MRTPIIAGNWKMHYTIDEAVKLVEE 25
>P52427:PSA4_SPIOL Proteasome subunit alpha type 4 - Spinacia oleracea (Spinach)| Length = 250 Score = 30.8 bits (68), Expect = 9.7 Identities = 16/53 (30%), Positives = 30/53 (56%) Frame = +2 Query: 626 ATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQIAKI 784 A G N A +L+ ++++D+T E+AVKL K L + + K ++A++ Sbjct: 163 AIGANNQAAQSMLKQDYKDDVTREDAVKLALKALSKTMDSTSLTSEKLELAEV 215
>Q01560:NOP3_YEAST Nucleolar protein 3 - Saccharomyces cerevisiae (Baker's yeast)| Length = 414 Score = 30.8 bits (68), Expect = 9.7 Identities = 13/36 (36%), Positives = 16/36 (44%) Frame = +1 Query: 34 HEEERIQRERDHHPQPQPQPSRGLPPTSETKPHQPP 141 H + Q HH P+PQP PP E +PP Sbjct: 78 HSVQDYQEAHQHHQPPEPQPYYPPPPPGEHMHGRPP 113
>Q752B6:CWC23_ASHGO Pre-mRNA-splicing factor CWC23 - Ashbya gossypii (Yeast)| (Eremothecium gossypii) Length = 273 Score = 30.8 bits (68), Expect = 9.7 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 7/54 (12%) Frame = +2 Query: 644 HMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINK-------FQIAKI 784 H+ IP G+WR + + L+E C L LL R S+ N FQ AK+ Sbjct: 137 HLRIPY--GDWRPNTSISRDSTLVETCTLRLLLRQNSTTNSKSSMLQLFQRAKL 188
>Q6FKT1:AEP3_CANGA ATPase expression protein 3 - Candida glabrata (Yeast) (Torulopsis| glabrata) Length = 623 Score = 30.8 bits (68), Expect = 9.7 Identities = 18/50 (36%), Positives = 27/50 (54%) Frame = -1 Query: 751 SVTVQQDKQALLNELNSFFKSHVLTPFTTKDWDCHMVPKSSGNVILLKVC 602 S + +++K LLN+LN+F L FTTK W +GN + K+C Sbjct: 503 SSSCEKNKTELLNKLNNFSWGKQLPLFTTKVW-------KNGNSEVRKIC 545
>Q2M2I8:AAK1_HUMAN AP2-associated protein kinase 1 - Homo sapiens (Human)| Length = 863 Score = 30.8 bits (68), Expect = 9.7 Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 2/26 (7%) Frame = +1 Query: 73 PQPQPQ--PSRGLPPTSETKPHQPPT 144 PQP+PQ PS+ LP T +P PPT Sbjct: 416 PQPKPQAPPSQPLPQTQAKQPQAPPT 441 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 188,877,244 Number of extensions: 4354013 Number of successful extensions: 15389 Number of sequences better than 10.0: 80 Number of HSP's gapped: 15034 Number of HSP's successfully gapped: 84 Length of query: 349 Length of database: 100,686,439 Length adjustment: 114 Effective length of query: 235 Effective length of database: 69,416,809 Effective search space: 16312950115 Effective search space used: 16312950115 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
