ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf30o15 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001070200.1| Oryza sativa (japonica cultivar-group) Os09g0515200 (Os09g0515200) mRNA, complete cds Length = 1091 Score = 704 bits (355), Expect = 0.0 Identities = 577/651 (88%) Strand = Plus / Plus Query: 236 attgcaatgaaatacaaggatggtgtgatcatggcatgtgatactggagcctcttatggg 295 |||||| ||||||||||||||||||| |||||||||| || ||||||||||| ||||| Sbjct: 225 attgcactgaaatacaaggatggtgtcatcatggcatccgacactggagcctcatatggc 284 Query: 296 tcaaccttgcgatacaagagtgtggagcgtatcaaggaggttggaaagcatagccttatt 355 ||||| |||||||||||||| |||||||| || |||| ||||| ||||||||||||||| Sbjct: 285 tcaactttgcgatacaagagcgtggagcgcattaaggctgttggtaagcatagccttatt 344 Query: 356 ggagggagtggggagttcagtgatttccaggagattttgcgctatctggatgaattaact 415 |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 345 ggagcaagtggggagttcagtgatttccaggagattttgcgctatttggatgaattaacc 404 Query: 416 ttgaacgatcatatgtgggatgatgggaactcattgggccccaaggaaatccatgcctac 475 || ||||||||||||||||||||| ||||| ||||| |||||||| ||||| |||| Sbjct: 405 ctgtccgatcatatgtgggatgatggaaactccttgggtcccaaggaggtccatagctac 464 Query: 476 ctgacaagagtaatgtacaacaggcgcaataagtttgaccctctatggaactccctggtg 535 ||||| ||||| ||||||||||||||||| |||||||| || || ||||||||||| || Sbjct: 465 ctgacgagagtgatgtacaacaggcgcaacaagtttgatcccctctggaactcccttgta 524 Query: 536 cttggtggagtgaaaaagggcccaaagggcgatgagaagtatcttggcatggttaacatg 595 ||||||| ||||||||||| |||||||| || ||||| ||||||||||||||||||||| Sbjct: 525 attggtggggtgaaaaagggtccaaagggtgaagagaaatatcttggcatggttaacatg 584 Query: 596 attggtacacactttgaggagaatcacattgccactggatttgggaaccatatggcaatc 655 |||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||| Sbjct: 585 attggtacacactttgaggaaaaccacattgccactgggtttgggaaccatatggcaatc 644 Query: 656 ccaatccttcgtggtgaatggcgtgaggacatgacttttgaagaagctgttaagctcatt 715 ||||| |||||| ||||||||| ||||||||||| ||||| |||||||| ||||| || Sbjct: 645 ccaatacttcgtactgaatggcgcgaggacatgacatttgaggaagctgtcaagcttgtt 704 Query: 716 gagaagtgcttgcttgtcctgctgtaccgtgaccgatcatctatcaacaaattccagatt 775 |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 705 gagaagtgcttgcttgtcctgctgtaccgtgaccgatcatctattaacaagttccagatt 764 Query: 776 gccaagatcacgaccgagggatcgaccatctacccaccgtatgccctgaagaccaactgg 835 ||||||||||| || |||||| ||||||||||||| || || | ||||||| ||||| Sbjct: 765 gccaagatcacaactgagggagcgaccatctacccgccatactcattgaagacttactgg 824 Query: 836 gggtttgctgcctttgagaacccgtccaagggtgctgtaggaacatggtag 886 || || ||||||||||| || ||| || |||||||||||||| |||||||| Sbjct: 825 ggcttcgctgcctttgaaaatccggcccagggtgctgtaggatcatggtag 875
>dbj|AK104212.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-D09, full insert sequence Length = 1005 Score = 704 bits (355), Expect = 0.0 Identities = 577/651 (88%) Strand = Plus / Plus Query: 236 attgcaatgaaatacaaggatggtgtgatcatggcatgtgatactggagcctcttatggg 295 |||||| ||||||||||||||||||| |||||||||| || ||||||||||| ||||| Sbjct: 139 attgcactgaaatacaaggatggtgtcatcatggcatccgacactggagcctcatatggc 198 Query: 296 tcaaccttgcgatacaagagtgtggagcgtatcaaggaggttggaaagcatagccttatt 355 ||||| |||||||||||||| |||||||| || |||| ||||| ||||||||||||||| Sbjct: 199 tcaactttgcgatacaagagcgtggagcgcattaaggctgttggtaagcatagccttatt 258 Query: 356 ggagggagtggggagttcagtgatttccaggagattttgcgctatctggatgaattaact 415 |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 259 ggagcaagtggggagttcagtgatttccaggagattttgcgctatttggatgaattaacc 318 Query: 416 ttgaacgatcatatgtgggatgatgggaactcattgggccccaaggaaatccatgcctac 475 || ||||||||||||||||||||| ||||| ||||| |||||||| ||||| |||| Sbjct: 319 ctgtccgatcatatgtgggatgatggaaactccttgggtcccaaggaggtccatagctac 378 Query: 476 ctgacaagagtaatgtacaacaggcgcaataagtttgaccctctatggaactccctggtg 535 ||||| ||||| ||||||||||||||||| |||||||| || || ||||||||||| || Sbjct: 379 ctgacgagagtgatgtacaacaggcgcaacaagtttgatcccctctggaactcccttgta 438 Query: 536 cttggtggagtgaaaaagggcccaaagggcgatgagaagtatcttggcatggttaacatg 595 ||||||| ||||||||||| |||||||| || ||||| ||||||||||||||||||||| Sbjct: 439 attggtggggtgaaaaagggtccaaagggtgaagagaaatatcttggcatggttaacatg 498 Query: 596 attggtacacactttgaggagaatcacattgccactggatttgggaaccatatggcaatc 655 |||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||| Sbjct: 499 attggtacacactttgaggaaaaccacattgccactgggtttgggaaccatatggcaatc 558 Query: 656 ccaatccttcgtggtgaatggcgtgaggacatgacttttgaagaagctgttaagctcatt 715 ||||| |||||| ||||||||| ||||||||||| ||||| |||||||| ||||| || Sbjct: 559 ccaatacttcgtactgaatggcgcgaggacatgacatttgaggaagctgtcaagcttgtt 618 Query: 716 gagaagtgcttgcttgtcctgctgtaccgtgaccgatcatctatcaacaaattccagatt 775 |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 619 gagaagtgcttgcttgtcctgctgtaccgtgaccgatcatctattaacaagttccagatt 678 Query: 776 gccaagatcacgaccgagggatcgaccatctacccaccgtatgccctgaagaccaactgg 835 ||||||||||| || |||||| ||||||||||||| || || | ||||||| ||||| Sbjct: 679 gccaagatcacaactgagggagcgaccatctacccgccatactcattgaagacttactgg 738 Query: 836 gggtttgctgcctttgagaacccgtccaagggtgctgtaggaacatggtag 886 || || ||||||||||| || ||| || |||||||||||||| |||||||| Sbjct: 739 ggcttcgctgcctttgaaaatccggcccagggtgctgtaggatcatggtag 789
>dbj|AK103975.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-F06, full insert sequence Length = 985 Score = 704 bits (355), Expect = 0.0 Identities = 577/651 (88%) Strand = Plus / Plus Query: 236 attgcaatgaaatacaaggatggtgtgatcatggcatgtgatactggagcctcttatggg 295 |||||| ||||||||||||||||||| |||||||||| || ||||||||||| ||||| Sbjct: 206 attgcactgaaatacaaggatggtgtcatcatggcatccgacactggagcctcatatggc 265 Query: 296 tcaaccttgcgatacaagagtgtggagcgtatcaaggaggttggaaagcatagccttatt 355 ||||| |||||||||||||| |||||||| || |||| ||||| ||||||||||||||| Sbjct: 266 tcaactttgcgatacaagagcgtggagcgcattaaggctgttggtaagcatagccttatt 325 Query: 356 ggagggagtggggagttcagtgatttccaggagattttgcgctatctggatgaattaact 415 |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 326 ggagcaagtggggagttcagtgatttccaggagattttgcgctatttggatgaattaacc 385 Query: 416 ttgaacgatcatatgtgggatgatgggaactcattgggccccaaggaaatccatgcctac 475 || ||||||||||||||||||||| ||||| ||||| |||||||| ||||| |||| Sbjct: 386 ctgtccgatcatatgtgggatgatggaaactccttgggtcccaaggaggtccatagctac 445 Query: 476 ctgacaagagtaatgtacaacaggcgcaataagtttgaccctctatggaactccctggtg 535 ||||| ||||| ||||||||||||||||| |||||||| || || ||||||||||| || Sbjct: 446 ctgacgagagtgatgtacaacaggcgcaacaagtttgatcccctctggaactcccttgta 505 Query: 536 cttggtggagtgaaaaagggcccaaagggcgatgagaagtatcttggcatggttaacatg 595 ||||||| ||||||||||| |||||||| || ||||| ||||||||||||||||||||| Sbjct: 506 attggtggggtgaaaaagggtccaaagggtgaagagaaatatcttggcatggttaacatg 565 Query: 596 attggtacacactttgaggagaatcacattgccactggatttgggaaccatatggcaatc 655 |||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||| Sbjct: 566 attggtacacactttgaggaaaaccacattgccactgggtttgggaaccatatggcaatc 625 Query: 656 ccaatccttcgtggtgaatggcgtgaggacatgacttttgaagaagctgttaagctcatt 715 ||||| |||||| ||||||||| ||||||||||| ||||| |||||||| ||||| || Sbjct: 626 ccaatacttcgtactgaatggcgcgaggacatgacatttgaggaagctgtcaagcttgtt 685 Query: 716 gagaagtgcttgcttgtcctgctgtaccgtgaccgatcatctatcaacaaattccagatt 775 |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 686 gagaagtgcttgcttgtcctgctgtaccgtgaccgatcatctattaacaagttccagatt 745 Query: 776 gccaagatcacgaccgagggatcgaccatctacccaccgtatgccctgaagaccaactgg 835 ||||||||||| || |||||| ||||||||||||| || || | ||||||| ||||| Sbjct: 746 gccaagatcacaactgagggagcgaccatctacccgccatactcattgaagacttactgg 805 Query: 836 gggtttgctgcctttgagaacccgtccaagggtgctgtaggaacatggtag 886 || || ||||||||||| || ||| || |||||||||||||| |||||||| Sbjct: 806 ggcttcgctgcctttgaaaatccggcccagggtgctgtaggatcatggtag 856
>dbj|AK071380.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091G01, full insert sequence Length = 1090 Score = 704 bits (355), Expect = 0.0 Identities = 577/651 (88%) Strand = Plus / Plus Query: 236 attgcaatgaaatacaaggatggtgtgatcatggcatgtgatactggagcctcttatggg 295 |||||| ||||||||||||||||||| |||||||||| || ||||||||||| ||||| Sbjct: 224 attgcactgaaatacaaggatggtgtcatcatggcatccgacactggagcctcatatggc 283 Query: 296 tcaaccttgcgatacaagagtgtggagcgtatcaaggaggttggaaagcatagccttatt 355 ||||| |||||||||||||| |||||||| || |||| ||||| ||||||||||||||| Sbjct: 284 tcaactttgcgatacaagagcgtggagcgcattaaggctgttggtaagcatagccttatt 343 Query: 356 ggagggagtggggagttcagtgatttccaggagattttgcgctatctggatgaattaact 415 |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 344 ggagcaagtggggagttcagtgatttccaggagattttgcgctatttggatgaattaacc 403 Query: 416 ttgaacgatcatatgtgggatgatgggaactcattgggccccaaggaaatccatgcctac 475 || ||||||||||||||||||||| ||||| ||||| |||||||| ||||| |||| Sbjct: 404 ctgtccgatcatatgtgggatgatggaaactccttgggtcccaaggaggtccatagctac 463 Query: 476 ctgacaagagtaatgtacaacaggcgcaataagtttgaccctctatggaactccctggtg 535 ||||| ||||| ||||||||||||||||| |||||||| || || ||||||||||| || Sbjct: 464 ctgacgagagtgatgtacaacaggcgcaacaagtttgatcccctctggaactcccttgta 523 Query: 536 cttggtggagtgaaaaagggcccaaagggcgatgagaagtatcttggcatggttaacatg 595 ||||||| ||||||||||| |||||||| || ||||| ||||||||||||||||||||| Sbjct: 524 attggtggggtgaaaaagggtccaaagggtgaagagaaatatcttggcatggttaacatg 583 Query: 596 attggtacacactttgaggagaatcacattgccactggatttgggaaccatatggcaatc 655 |||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||| Sbjct: 584 attggtacacactttgaggaaaaccacattgccactgggtttgggaaccatatggcaatc 643 Query: 656 ccaatccttcgtggtgaatggcgtgaggacatgacttttgaagaagctgttaagctcatt 715 ||||| |||||| ||||||||| ||||||||||| ||||| |||||||| ||||| || Sbjct: 644 ccaatacttcgtactgaatggcgcgaggacatgacatttgaggaagctgtcaagcttgtt 703 Query: 716 gagaagtgcttgcttgtcctgctgtaccgtgaccgatcatctatcaacaaattccagatt 775 |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 704 gagaagtgcttgcttgtcctgctgtaccgtgaccgatcatctattaacaagttccagatt 763 Query: 776 gccaagatcacgaccgagggatcgaccatctacccaccgtatgccctgaagaccaactgg 835 ||||||||||| || |||||| ||||||||||||| || || | ||||||| ||||| Sbjct: 764 gccaagatcacaactgagggagcgaccatctacccgccatactcattgaagacttactgg 823 Query: 836 gggtttgctgcctttgagaacccgtccaagggtgctgtaggaacatggtag 886 || || ||||||||||| || ||| || |||||||||||||| |||||||| Sbjct: 824 ggcttcgctgcctttgaaaatccggcccagggtgctgtaggatcatggtag 874
>dbj|AB026568.1| Oryza sativa (japonica cultivar-group) OsPBG1 mRNA for beta 7 subunit of 20S proteasome, complete cds Length = 1118 Score = 696 bits (351), Expect = 0.0 Identities = 576/651 (88%) Strand = Plus / Plus Query: 236 attgcaatgaaatacaaggatggtgtgatcatggcatgtgatactggagcctcttatggg 295 |||||| ||||||||||||||||||| |||||||||| || ||||||||||| ||||| Sbjct: 225 attgcactgaaatacaaggatggtgtcatcatggcatccgacactggagcctcatatggc 284 Query: 296 tcaaccttgcgatacaagagtgtggagcgtatcaaggaggttggaaagcatagccttatt 355 ||||| |||||||||||||| |||||||| || |||| ||||| ||||||||||||||| Sbjct: 285 tcaactttgcgatacaagagcgtggagcgcattaaggctgttggtaagcatagccttatt 344 Query: 356 ggagggagtggggagttcagtgatttccaggagattttgcgctatctggatgaattaact 415 |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 345 ggagcaagtggggagttcagtgatttccaggagattttgcgctatttggatgaattaacc 404 Query: 416 ttgaacgatcatatgtgggatgatgggaactcattgggccccaaggaaatccatgcctac 475 || ||||||||||||||||||||| ||||| ||||| |||||||| ||||| |||| Sbjct: 405 ctgtccgatcatatgtgggatgatggaaactccttgggtcccaaggaggtccatagctac 464 Query: 476 ctgacaagagtaatgtacaacaggcgcaataagtttgaccctctatggaactccctggtg 535 ||||| ||||| ||||||||||||||||| |||||||| || || ||||||||||| || Sbjct: 465 ctgacgagagtgatgtacaacaggcgcaacaagtttgatcccctctggaactcccttgta 524 Query: 536 cttggtggagtgaaaaagggcccaaagggcgatgagaagtatcttggcatggttaacatg 595 ||||||| ||||||||||| |||||||| || ||||| ||||||||||||||||||||| Sbjct: 525 attggtggggtgaaaaagggtccaaagggtgaagagaaatatcttggcatggttaacatg 584 Query: 596 attggtacacactttgaggagaatcacattgccactggatttgggaaccatatggcaatc 655 ||||||||||| |||||||| || |||||||||||||| ||||||||||||||||||||| Sbjct: 585 attggtacacattttgaggaaaaccacattgccactgggtttgggaaccatatggcaatc 644 Query: 656 ccaatccttcgtggtgaatggcgtgaggacatgacttttgaagaagctgttaagctcatt 715 ||||| |||||| ||||||||| ||||||||||| ||||| |||||||| ||||| || Sbjct: 645 ccaatacttcgtactgaatggcgcgaggacatgacatttgaggaagctgtcaagcttgtt 704 Query: 716 gagaagtgcttgcttgtcctgctgtaccgtgaccgatcatctatcaacaaattccagatt 775 |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 705 gagaagtgcttgcttgtcctgctgtaccgtgaccgatcatctattaacaagttccagatt 764 Query: 776 gccaagatcacgaccgagggatcgaccatctacccaccgtatgccctgaagaccaactgg 835 ||||||||||| || |||||| ||||||||||||| || || | ||||||| ||||| Sbjct: 765 gccaagatcacaactgagggagcgaccatctacccgccatactcattgaagacttactgg 824 Query: 836 gggtttgctgcctttgagaacccgtccaagggtgctgtaggaacatggtag 886 || || ||||||||||| || ||| || |||||||||||||| |||||||| Sbjct: 825 ggcttcgctgcctttgaaaatccggcccagggtgctgtaggatcatggtag 875
>gb|AY736120.1| Triticum aestivum 20S proteasome beta 7 subunit mRNA, complete cds Length = 694 Score = 664 bits (335), Expect = 0.0 Identities = 374/387 (96%) Strand = Plus / Plus Query: 499 gcgcaataagtttgaccctctatggaactccctggtgcttggtggagtgaaaaagggccc 558 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 gcgcaataagtttgaccctctatggaactccctggtgcttggtggagtgaaaaagggccc 361 Query: 559 aaagggcgatgagaagtatcttggcatggttaacatgattggtacacactttgaggagaa 618 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 362 aaagggcgatgagaagtatcttggcatggttaacatgattggtacacactttgaggaaaa 421 Query: 619 tcacattgccactggatttgggaaccatatggcaatcccaatccttcgtggtgaatggcg 678 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 422 ccacattgccactggatttgggaaccatatggcaatcccaatacttcgtggtgaatggcg 481 Query: 679 tgaggacatgacttttgaagaagctgttaagctcattgagaagtgcttgcttgtcctgct 738 |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 482 cgaggacatgacttttgaagaagctgttaagctgattgagaagtgcttgctggtcctgct 541 Query: 739 gtaccgtgaccgatcatctatcaacaaattccagattgccaagatcacgaccgagggatc 798 |||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 542 gtaccgtgaccggtcatccatcaacaaattccagattgccaagatcacaaccgagggatc 601 Query: 799 gaccatctacccaccgtatgccctgaagaccaactgggggtttgctgcctttgagaaccc 858 ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 602 aaccatctacccgccgtatgccctgaagaccaactgggggtttgccgcctttgagaaccc 661 Query: 859 gtccaagggtgctgtaggaacatggta 885 |||||||||||||||||||||||||| Sbjct: 662 atccaagggtgctgtaggaacatggta 688 Score = 391 bits (197), Expect = e-105 Identities = 224/233 (96%) Strand = Plus / Plus Query: 182 ggaggggacggaacgcagaggacactgaacccttatgtgactggtaactcggtgattgca 241 ||||| ||||| ||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 69 ggaggagacgggacgcagaggacactgaatccttatgtgactggtaattcggtgattgca 128 Query: 242 atgaaatacaaggatggtgtgatcatggcatgtgatactggagcctcttatgggtcaacc 301 |||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 129 atgaaatacaaggacggtgtgatcatggcatgtgacactggagcctcctatgggtcaact 188 Query: 302 ttgcgatacaagagtgtggagcgtatcaaggaggttggaaagcatagccttattggaggg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 189 ttgcgatacaagagtgtggagcgtatcaaggaggttggaaagcatagccttattggaggg 248 Query: 362 agtggggagttcagtgatttccaggagattttgcgctatctggatgaattaac 414 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 249 agtggggagttcagtgatttccaggagattttgcggtatctggatgaattaac 301 Score = 61.9 bits (31), Expect = 4e-06 Identities = 44/47 (93%), Gaps = 1/47 (2%) Strand = Plus / Plus Query: 112 acgagcgaaac-aaagccgcatcaaccccccacgcgaaccgatggac 157 ||||||||||| ||||||||||||| |||||||||| |||||||||| Sbjct: 1 acgagcgaaaccaaagccgcatcaagcccccacgcgcaccgatggac 47
>gb|BT018203.1| Zea mays clone EL01N0560A08.c mRNA sequence Length = 946 Score = 569 bits (287), Expect = e-159 Identities = 539/623 (86%) Strand = Plus / Plus Query: 215 tatgtgactggtaactcggtgattgcaatgaaatacaaggatggtgtgatcatggcatgt 274 |||||||||||||| || || ||||| |||||||||||||||||||||||||||||||| Sbjct: 221 tatgtgactggtaattcagtcattgccttgaaatacaaggatggtgtgatcatggcatgt 280 Query: 275 gatactggagcctcttatgggtcaaccttgcgatacaagagtgtggagcgtatcaaggag 334 || ||||||||||||||||| ||||| ||| |||||||||||||||| | || |||| Sbjct: 281 gacactggagcctcttatggatcaactttgagatacaagagtgtggaactcattaaggca 340 Query: 335 gttggaaagcatagccttattggagggagtggggagttcagtgatttccaggagattttg 394 ||||| ||||||||| | ||||||| || || ||||||||||| ||||||||||||||| Sbjct: 341 gttggcaagcatagcatcattggagcaagcggagagttcagtgacttccaggagattttg 400 Query: 395 cgctatctggatgaattaactttgaacgatcatatgtgggatgatgggaactcattgggc 454 |||||| |||||||| ||||| || |||||||||||||||||||| ||||| ||||| Sbjct: 401 cgctatttggatgaactaactctgtctgatcatatgtgggatgatggaaactcgctgggc 460 Query: 455 cccaaggaaatccatgcctacctgacaagagtaatgtacaacaggcgcaataagtttgac 514 ||||| || ||||| ||| |||||||||| ||||||||| ||||||| |||||||| Sbjct: 461 cccaaagagatccacagctatttgacaagagtgatgtacaaccggcgcaacaagtttgat 520 Query: 515 cctctatggaactccctggtgcttggtggagtgaaaaagggcccaaagggcgatgagaag 574 ||||| |||||||| || || |||||||| ||||||||||| |||||||| ||||||||| Sbjct: 521 cctctctggaactcacttgtacttggtggggtgaaaaagggtccaaagggtgatgagaag 580 Query: 575 tatcttggcatggttaacatgattggtacacactttgaggagaatcacattgccactgga 634 |||||||| |||||||||||||||||||| ||||| ||||| || || | || |||||| Sbjct: 581 tatcttgggatggttaacatgattggtacccacttcgaggaaaaccatgtcgctactgga 640 Query: 635 tttgggaaccatatggcaatcccaatccttcgtggtgaatggcgtgaggacatgactttt 694 ||||| || |||||||||||||| || || |||| ||||||||| ||||| ||||||||| Sbjct: 641 tttggaaatcatatggcaatcccgatactccgtgctgaatggcgcgaggatatgactttt 700 Query: 695 gaagaagctgttaagctcattgagaagtgcttgcttgtcctgctgtaccgtgaccgatca 754 ||||||||||||||||| |||||||||||||| | ||| |||||||||| ||| ||||| Sbjct: 701 gaagaagctgttaagctggttgagaagtgcttggtggtcttgctgtaccgagacagatca 760 Query: 755 tctatcaacaaattccagattgccaagatcacgaccgagggatcgaccatctacccaccg 814 |||||||||||||||||||||||||||||||| | || ||||| ||||||||||| || Sbjct: 761 tctatcaacaaattccagattgccaagatcacaagggaaggatcaaccatctacccccca 820 Query: 815 tatgccctgaagaccaactgggg 837 ||| || |||||||| ||||||| Sbjct: 821 tattccttgaagacctactgggg 843
>gb|AY104193.1| Zea mays PCO143176 mRNA sequence Length = 1187 Score = 531 bits (268), Expect = e-147 Identities = 571/672 (84%) Strand = Plus / Plus Query: 215 tatgtgactggtaactcggtgattgcaatgaaatacaaggatggtgtgatcatggcatgt 274 ||||||||||||| || || ||||| |||||||||||||||||||||||||||||||| Sbjct: 323 tatgtgactggtacttcagtcattgccttgaaatacaaggatggtgtgatcatggcatgt 382 Query: 275 gatactggagcctcttatgggtcaaccttgcgatacaagagtgtggagcgtatcaaggag 334 || |||||||| || ||||| ||||| ||| |||||||||||||||| || || |||| Sbjct: 383 gacactggagcatcctatggatcaactttgagatacaagagtgtggaacgcattaaggct 442 Query: 335 gttggaaagcatagccttattggagggagtggggagttcagtgatttccaggagattttg 394 ||||| ||||||||| | ||||||| || || |||||||| |||||||||||||| || Sbjct: 443 gttggcaagcatagcatcattggagcaagcggagagttcagcgatttccaggagatcctg 502 Query: 395 cgctatctggatgaattaactttgaacgatcatatgtgggatgatgggaactcattgggc 454 ||||||||||||||| ||||| | |||||||||||||||||||| || || ||||| Sbjct: 503 cgctatctggatgaactaactctttctgatcatatgtgggatgatggaaattctctgggc 562 Query: 455 cccaaggaaatccatgcctacctgacaagagtaatgtacaacaggcgcaataagtttgac 514 ||||| || ||||| || |||||||||| ||||||||||| ||||| |||||||| Sbjct: 563 cccaaagagatccacagttatttgacaagagtgatgtacaacagacgcaacaagtttgat 622 Query: 515 cctctatggaactccctggtgcttggtggagtgaaaaagggcccaaagggcgatgagaag 574 ||||| |||||||| || || |||||||||||||||||||| |||||||| ||||||||| Sbjct: 623 cctctctggaactcacttgtacttggtggagtgaaaaagggtccaaagggtgatgagaag 682 Query: 575 tatcttggcatggttaacatgattggtacacactttgaggagaatcacattgccactgga 634 ||||||||||||||||| ||||||||||| ||||| ||||| || || | || |||||| Sbjct: 683 tatcttggcatggttaatatgattggtacccacttcgaggaaaaccatgtcgcaactgga 742 Query: 635 tttgggaaccatatggcaatcccaatccttcgtggtgaatggcgtgaggacatgactttt 694 |||| || ||| |||| ||||| || || |||| ||||||||| ||||| ||||||||| Sbjct: 743 tttgcaaatcatctggcgatcccgatactccgtgctgaatggcgcgaggatatgactttt 802 Query: 695 gaagaagctgttaagctcattgagaagtgcttgcttgtcctgctgtaccgtgaccgatca 754 ||||||||||||||||| |||||||||||||||| ||| |||||||||||||| | ||| Sbjct: 803 gaagaagctgttaagctggttgagaagtgcttgctggtcttgctgtaccgtgacaggtca 862 Query: 755 tctatcaacaaattccagattgccaagatcacgaccgagggatcgaccatctacccaccg 814 |||||||||||||||||||||||||||||||| || || ||||| |||||||||||||| Sbjct: 863 tctatcaacaaattccagattgccaagatcacaactgaaggatcaaccatctacccacca 922 Query: 815 tatgccctgaagaccaactgggggtttgctgcctttgagaacccgtccaagggtgctgta 874 ||| || |||||||| ||||||| || || |||||| ||||| || |||| ||||| Sbjct: 923 tattccttgaagacctactggggcttctctcactttgaaaacccagcccagggcgctgtg 982 Query: 875 ggaacatggtag 886 ||| |||||||| Sbjct: 983 ggatcatggtag 994
>gb|AC108755.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0028C22, complete sequence Length = 154228 Score = 260 bits (131), Expect = 9e-66 Identities = 173/187 (92%) Strand = Plus / Minus Query: 586 ggttaacatgattggtacacactttgaggagaatcacattgccactggatttgggaacca 645 |||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||| Sbjct: 99775 ggttaacatgattggtacacactttgaggaaaaccacattgccactgggtttgggaacca 99716 Query: 646 tatggcaatcccaatccttcgtggtgaatggcgtgaggacatgacttttgaagaagctgt 705 ||||||||||||||| |||||| ||||||||| ||||||||||| ||||| |||||||| Sbjct: 99715 tatggcaatcccaatacttcgtactgaatggcgcgaggacatgacatttgaggaagctgt 99656 Query: 706 taagctcattgagaagtgcttgcttgtcctgctgtaccgtgaccgatcatctatcaacaa 765 ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 99655 caagcttgttgagaagtgcttgcttgtcctgctgtaccgtgaccgatcatctattaacaa 99596 Query: 766 attccag 772 |||||| Sbjct: 99595 gttccag 99589 Score = 167 bits (84), Expect = 1e-37 Identities = 147/168 (87%) Strand = Plus / Minus Query: 421 cgatcatatgtgggatgatgggaactcattgggccccaaggaaatccatgcctacctgac 480 ||||||||||||||||||||| ||||| ||||| |||||||| ||||| ||||||||| Sbjct: 100028 cgatcatatgtgggatgatggaaactccttgggtcccaaggaggtccatagctacctgac 99969 Query: 481 aagagtaatgtacaacaggcgcaataagtttgaccctctatggaactccctggtgcttgg 540 ||||| ||||||||||||||||| |||||||| || || ||||||||||| || |||| Sbjct: 99968 gagagtgatgtacaacaggcgcaacaagtttgatcccctctggaactcccttgtaattgg 99909 Query: 541 tggagtgaaaaagggcccaaagggcgatgagaagtatcttggcatggt 588 ||| ||||||||||| |||||||| || ||||| |||||||||||||| Sbjct: 99908 tggggtgaaaaagggtccaaagggtgaagagaaatatcttggcatggt 99861 Score = 167 bits (84), Expect = 1e-37 Identities = 120/132 (90%) Strand = Plus / Minus Query: 283 agcctcttatgggtcaaccttgcgatacaagagtgtggagcgtatcaaggaggttggaaa 342 |||||| ||||| ||||| |||||||||||||| |||||||| || |||| ||||| || Sbjct: 100252 agcctcatatggctcaactttgcgatacaagagcgtggagcgcattaaggctgttggtaa 100193 Query: 343 gcatagccttattggagggagtggggagttcagtgatttccaggagattttgcgctatct 402 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 100192 gcatagccttattggagcaagtggggagttcagtgatttccaggagattttgcgctattt 100133 Query: 403 ggatgaattaac 414 |||||||||||| Sbjct: 100132 ggatgaattaac 100121 Score = 87.7 bits (44), Expect = 7e-14 Identities = 98/116 (84%) Strand = Plus / Minus Query: 771 agattgccaagatcacgaccgagggatcgaccatctacccaccgtatgccctgaagacca 830 |||||||||||||||| || |||||| ||||||||||||| || || | ||||||| Sbjct: 99493 agattgccaagatcacaactgagggagcgaccatctacccgccatactcattgaagactt 99434 Query: 831 actgggggtttgctgcctttgagaacccgtccaagggtgctgtaggaacatggtag 886 ||||||| || ||||||||||| || ||| || |||||||||||||| |||||||| Sbjct: 99433 actggggcttcgctgcctttgaaaatccggcccagggtgctgtaggatcatggtag 99378 Score = 58.0 bits (29), Expect = 7e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 236 attgcaatgaaatacaaggatggtgtgatcatggcat 272 |||||| ||||||||||||||||||| |||||||||| Sbjct: 100375 attgcactgaaatacaaggatggtgtcatcatggcat 100339
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 260 bits (131), Expect = 9e-66 Identities = 173/187 (92%) Strand = Plus / Minus Query: 586 ggttaacatgattggtacacactttgaggagaatcacattgccactggatttgggaacca 645 |||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||| Sbjct: 19772508 ggttaacatgattggtacacactttgaggaaaaccacattgccactgggtttgggaacca 19772449 Query: 646 tatggcaatcccaatccttcgtggtgaatggcgtgaggacatgacttttgaagaagctgt 705 ||||||||||||||| |||||| ||||||||| ||||||||||| ||||| |||||||| Sbjct: 19772448 tatggcaatcccaatacttcgtactgaatggcgcgaggacatgacatttgaggaagctgt 19772389 Query: 706 taagctcattgagaagtgcttgcttgtcctgctgtaccgtgaccgatcatctatcaacaa 765 ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 19772388 caagcttgttgagaagtgcttgcttgtcctgctgtaccgtgaccgatcatctattaacaa 19772329 Query: 766 attccag 772 |||||| Sbjct: 19772328 gttccag 19772322 Score = 167 bits (84), Expect = 1e-37 Identities = 147/168 (87%) Strand = Plus / Minus Query: 421 cgatcatatgtgggatgatgggaactcattgggccccaaggaaatccatgcctacctgac 480 ||||||||||||||||||||| ||||| ||||| |||||||| ||||| ||||||||| Sbjct: 19772761 cgatcatatgtgggatgatggaaactccttgggtcccaaggaggtccatagctacctgac 19772702 Query: 481 aagagtaatgtacaacaggcgcaataagtttgaccctctatggaactccctggtgcttgg 540 ||||| ||||||||||||||||| |||||||| || || ||||||||||| || |||| Sbjct: 19772701 gagagtgatgtacaacaggcgcaacaagtttgatcccctctggaactcccttgtaattgg 19772642 Query: 541 tggagtgaaaaagggcccaaagggcgatgagaagtatcttggcatggt 588 ||| ||||||||||| |||||||| || ||||| |||||||||||||| Sbjct: 19772641 tggggtgaaaaagggtccaaagggtgaagagaaatatcttggcatggt 19772594 Score = 167 bits (84), Expect = 1e-37 Identities = 120/132 (90%) Strand = Plus / Minus Query: 283 agcctcttatgggtcaaccttgcgatacaagagtgtggagcgtatcaaggaggttggaaa 342 |||||| ||||| ||||| |||||||||||||| |||||||| || |||| ||||| || Sbjct: 19772985 agcctcatatggctcaactttgcgatacaagagcgtggagcgcattaaggctgttggtaa 19772926 Query: 343 gcatagccttattggagggagtggggagttcagtgatttccaggagattttgcgctatct 402 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 19772925 gcatagccttattggagcaagtggggagttcagtgatttccaggagattttgcgctattt 19772866 Query: 403 ggatgaattaac 414 |||||||||||| Sbjct: 19772865 ggatgaattaac 19772854 Score = 87.7 bits (44), Expect = 7e-14 Identities = 98/116 (84%) Strand = Plus / Minus Query: 771 agattgccaagatcacgaccgagggatcgaccatctacccaccgtatgccctgaagacca 830 |||||||||||||||| || |||||| ||||||||||||| || || | ||||||| Sbjct: 19772226 agattgccaagatcacaactgagggagcgaccatctacccgccatactcattgaagactt 19772167 Query: 831 actgggggtttgctgcctttgagaacccgtccaagggtgctgtaggaacatggtag 886 ||||||| || ||||||||||| || ||| || |||||||||||||| |||||||| Sbjct: 19772166 actggggcttcgctgcctttgaaaatccggcccagggtgctgtaggatcatggtag 19772111 Score = 58.0 bits (29), Expect = 7e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 236 attgcaatgaaatacaaggatggtgtgatcatggcat 272 |||||| ||||||||||||||||||| |||||||||| Sbjct: 19773108 attgcactgaaatacaaggatggtgtcatcatggcat 19773072
>dbj|AP006756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0450E05 Length = 176553 Score = 260 bits (131), Expect = 9e-66 Identities = 173/187 (92%) Strand = Plus / Minus Query: 586 ggttaacatgattggtacacactttgaggagaatcacattgccactggatttgggaacca 645 |||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||| Sbjct: 118194 ggttaacatgattggtacacactttgaggaaaaccacattgccactgggtttgggaacca 118135 Query: 646 tatggcaatcccaatccttcgtggtgaatggcgtgaggacatgacttttgaagaagctgt 705 ||||||||||||||| |||||| ||||||||| ||||||||||| ||||| |||||||| Sbjct: 118134 tatggcaatcccaatacttcgtactgaatggcgcgaggacatgacatttgaggaagctgt 118075 Query: 706 taagctcattgagaagtgcttgcttgtcctgctgtaccgtgaccgatcatctatcaacaa 765 ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 118074 caagcttgttgagaagtgcttgcttgtcctgctgtaccgtgaccgatcatctattaacaa 118015 Query: 766 attccag 772 |||||| Sbjct: 118014 gttccag 118008 Score = 167 bits (84), Expect = 1e-37 Identities = 147/168 (87%) Strand = Plus / Minus Query: 421 cgatcatatgtgggatgatgggaactcattgggccccaaggaaatccatgcctacctgac 480 ||||||||||||||||||||| ||||| ||||| |||||||| ||||| ||||||||| Sbjct: 118447 cgatcatatgtgggatgatggaaactccttgggtcccaaggaggtccatagctacctgac 118388 Query: 481 aagagtaatgtacaacaggcgcaataagtttgaccctctatggaactccctggtgcttgg 540 ||||| ||||||||||||||||| |||||||| || || ||||||||||| || |||| Sbjct: 118387 gagagtgatgtacaacaggcgcaacaagtttgatcccctctggaactcccttgtaattgg 118328 Query: 541 tggagtgaaaaagggcccaaagggcgatgagaagtatcttggcatggt 588 ||| ||||||||||| |||||||| || ||||| |||||||||||||| Sbjct: 118327 tggggtgaaaaagggtccaaagggtgaagagaaatatcttggcatggt 118280 Score = 167 bits (84), Expect = 1e-37 Identities = 120/132 (90%) Strand = Plus / Minus Query: 283 agcctcttatgggtcaaccttgcgatacaagagtgtggagcgtatcaaggaggttggaaa 342 |||||| ||||| ||||| |||||||||||||| |||||||| || |||| ||||| || Sbjct: 118671 agcctcatatggctcaactttgcgatacaagagcgtggagcgcattaaggctgttggtaa 118612 Query: 343 gcatagccttattggagggagtggggagttcagtgatttccaggagattttgcgctatct 402 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 118611 gcatagccttattggagcaagtggggagttcagtgatttccaggagattttgcgctattt 118552 Query: 403 ggatgaattaac 414 |||||||||||| Sbjct: 118551 ggatgaattaac 118540 Score = 87.7 bits (44), Expect = 7e-14 Identities = 98/116 (84%) Strand = Plus / Minus Query: 771 agattgccaagatcacgaccgagggatcgaccatctacccaccgtatgccctgaagacca 830 |||||||||||||||| || |||||| ||||||||||||| || || | ||||||| Sbjct: 117912 agattgccaagatcacaactgagggagcgaccatctacccgccatactcattgaagactt 117853 Query: 831 actgggggtttgctgcctttgagaacccgtccaagggtgctgtaggaacatggtag 886 ||||||| || ||||||||||| || ||| || |||||||||||||| |||||||| Sbjct: 117852 actggggcttcgctgcctttgaaaatccggcccagggtgctgtaggatcatggtag 117797 Score = 58.0 bits (29), Expect = 7e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 236 attgcaatgaaatacaaggatggtgtgatcatggcat 272 |||||| ||||||||||||||||||| |||||||||| Sbjct: 118794 attgcactgaaatacaaggatggtgtcatcatggcat 118758
>gb|AC189496.1| Brassica rapa subsp. pekinensis clone KBrB086C10, complete sequence Length = 130811 Score = 61.9 bits (31), Expect = 4e-06 Identities = 115/143 (80%) Strand = Plus / Plus Query: 611 gaggagaatcacattgccactggatttgggaaccatatggcaatcccaatccttcgtggt 670 ||||| ||||| |||||||||||||||||||||| | || | ||||||||||||| | Sbjct: 11682 gaggacaatcatgttgccactggatttgggaaccacctagctaggccaatccttcgtgat 11741 Query: 671 gaatggcgtgaggacatgacttttgaagaagctgttaagctcattgagaagtgcttgctt 730 || ||||||| |||| ||| || ||||| | ||| |||||| ||||||| || ||| | Sbjct: 11742 gagtggcgtgcggacctgagcttcgaagatggtgtcaagctccttgagaaatgtatgcgt 11801 Query: 731 gtcctgctgtaccgtgaccgatc 753 || || || ||||||||| |||| Sbjct: 11802 gtgcttctttaccgtgacagatc 11824 Score = 44.1 bits (22), Expect = 1.0 Identities = 34/38 (89%) Strand = Plus / Plus Query: 416 ttgaacgatcatatgtgggatgatgggaactcattggg 453 ||||||||| | |||||||||||||| ||||| ||||| Sbjct: 11414 ttgaacgataacatgtgggatgatggtaactctttggg 11451
>gb|AC164103.5| Mus musculus BAC clone RP23-427D2 from chromosome 5, complete sequence Length = 188588 Score = 50.1 bits (25), Expect = 0.016 Identities = 28/29 (96%) Strand = Plus / Plus Query: 69 ccatccccagccccagccccagccgagcc 97 |||||||||||||||||||||||| |||| Sbjct: 175827 ccatccccagccccagccccagcccagcc 175855
>ref|XM_854103.1| PREDICTED: Canis familiaris similar to nischarin, transcript variant 3 (LOC476594), mRNA Length = 4618 Score = 50.1 bits (25), Expect = 0.016 Identities = 25/25 (100%) Strand = Plus / Plus Query: 73 ccccagccccagccccagccgagcc 97 ||||||||||||||||||||||||| Sbjct: 3311 ccccagccccagccccagccgagcc 3335
>ref|XM_533798.2| PREDICTED: Canis familiaris similar to nischarin, transcript variant 1 (LOC476594), mRNA Length = 5208 Score = 50.1 bits (25), Expect = 0.016 Identities = 25/25 (100%) Strand = Plus / Plus Query: 73 ccccagccccagccccagccgagcc 97 ||||||||||||||||||||||||| Sbjct: 3311 ccccagccccagccccagccgagcc 3335
>gb|AC134862.4| Mus musculus BAC clone RP24-91P2 from 5, complete sequence Length = 205726 Score = 50.1 bits (25), Expect = 0.016 Identities = 28/29 (96%) Strand = Plus / Plus Query: 69 ccatccccagccccagccccagccgagcc 97 |||||||||||||||||||||||| |||| Sbjct: 85220 ccatccccagccccagccccagcccagcc 85248
>ref|XM_520802.2| PREDICTED: Pan troglodytes cancer susceptibility candidate 1 (CASC1), mRNA Length = 4339 Score = 48.1 bits (24), Expect = 0.064 Identities = 24/24 (100%) Strand = Plus / Minus Query: 910 aactgtgctgctgaaacagtttca 933 |||||||||||||||||||||||| Sbjct: 2523 aactgtgctgctgaaacagtttca 2500
>gb|BC117283.1| Homo sapiens cancer susceptibility candidate 1, mRNA (cDNA clone MGC:150892 IMAGE:40125834), complete cds Length = 2118 Score = 48.1 bits (24), Expect = 0.064 Identities = 24/24 (100%) Strand = Plus / Minus Query: 910 aactgtgctgctgaaacagtttca 933 |||||||||||||||||||||||| Sbjct: 984 aactgtgctgctgaaacagtttca 961
>gb|BC117281.1| Homo sapiens cancer susceptibility candidate 1, mRNA (cDNA clone MGC:150890 IMAGE:40125832), complete cds Length = 2115 Score = 48.1 bits (24), Expect = 0.064 Identities = 24/24 (100%) Strand = Plus / Minus Query: 910 aactgtgctgctgaaacagtttca 933 |||||||||||||||||||||||| Sbjct: 984 aactgtgctgctgaaacagtttca 961
>ref|XR_012635.1| PREDICTED: Macaca mulatta similar to cancer susceptibility candidate 1 (LOC707753), mRNA Length = 3045 Score = 48.1 bits (24), Expect = 0.064 Identities = 24/24 (100%) Strand = Plus / Minus Query: 910 aactgtgctgctgaaacagtttca 933 |||||||||||||||||||||||| Sbjct: 1244 aactgtgctgctgaaacagtttca 1221
>gb|BC047415.1| Homo sapiens cancer susceptibility candidate 1, mRNA (cDNA clone IMAGE:5269578), partial cds Length = 2578 Score = 48.1 bits (24), Expect = 0.064 Identities = 24/24 (100%) Strand = Plus / Minus Query: 910 aactgtgctgctgaaacagtttca 933 |||||||||||||||||||||||| Sbjct: 1205 aactgtgctgctgaaacagtttca 1182
>gb|AC157610.2| Mus musculus chromosome 15, clone RP23-77H12, complete sequence Length = 164913 Score = 48.1 bits (24), Expect = 0.064 Identities = 24/24 (100%) Strand = Plus / Plus Query: 69 ccatccccagccccagccccagcc 92 |||||||||||||||||||||||| Sbjct: 38388 ccatccccagccccagccccagcc 38411 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 ccccagccccagccccagccgagcc 97 |||||||||||||||||||| |||| Sbjct: 38416 ccccagccccagccccagcccagcc 38440
>gb|AC121365.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0053E05, complete sequence Length = 196284 Score = 48.1 bits (24), Expect = 0.064 Identities = 27/28 (96%) Strand = Plus / Plus Query: 236 attgcaatgaaatacaaggatggtgtga 263 |||||| ||||||||||||||||||||| Sbjct: 107591 attgcactgaaatacaaggatggtgtga 107618
>ref|NM_018272.2| Homo sapiens cancer susceptibility candidate 1 (CASC1), mRNA Length = 2550 Score = 48.1 bits (24), Expect = 0.064 Identities = 24/24 (100%) Strand = Plus / Minus Query: 910 aactgtgctgctgaaacagtttca 933 |||||||||||||||||||||||| Sbjct: 1205 aactgtgctgctgaaacagtttca 1182
>gb|AC131781.3| Mus musculus BAC clone RP24-344J9 from chromosome 15, complete sequence Length = 139338 Score = 48.1 bits (24), Expect = 0.064 Identities = 24/24 (100%) Strand = Plus / Plus Query: 69 ccatccccagccccagccccagcc 92 |||||||||||||||||||||||| Sbjct: 53529 ccatccccagccccagccccagcc 53552 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 ccccagccccagccccagccgagcc 97 |||||||||||||||||||| |||| Sbjct: 53557 ccccagccccagccccagcccagcc 53581
>gb|AY423543.1| Homo sapiens lung adenoma susceptibility 1-like protein (LAS1) mRNA, complete cds Length = 2151 Score = 48.1 bits (24), Expect = 0.064 Identities = 24/24 (100%) Strand = Plus / Minus Query: 910 aactgtgctgctgaaacagtttca 933 |||||||||||||||||||||||| Sbjct: 1067 aactgtgctgctgaaacagtttca 1044
>gb|AC163027.5| Mus musculus chromosome 5, clone RP23-396H22, complete sequence Length = 216377 Score = 48.1 bits (24), Expect = 0.064 Identities = 24/24 (100%) Strand = Plus / Minus Query: 69 ccatccccagccccagccccagcc 92 |||||||||||||||||||||||| Sbjct: 87905 ccatccccagccccagccccagcc 87882 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 ccatccccagccccagcccca 89 ||||||||||||||||||||| Sbjct: 87923 ccatccccagccccagcccca 87903
>gb|BC057795.1| Homo sapiens cancer susceptibility candidate 1, mRNA (cDNA clone MGC:71648 IMAGE:5266518), complete cds Length = 2376 Score = 48.1 bits (24), Expect = 0.064 Identities = 24/24 (100%) Strand = Plus / Minus Query: 910 aactgtgctgctgaaacagtttca 933 |||||||||||||||||||||||| Sbjct: 1149 aactgtgctgctgaaacagtttca 1126
>dbj|AK093358.1| Homo sapiens cDNA FLJ36039 fis, clone TESTI2017311 Length = 2483 Score = 48.1 bits (24), Expect = 0.064 Identities = 24/24 (100%) Strand = Plus / Plus Query: 69 ccatccccagccccagccccagcc 92 |||||||||||||||||||||||| Sbjct: 419 ccatccccagccccagccccagcc 442
>dbj|AK093102.1| Homo sapiens cDNA FLJ35783 fis, clone TESTI2005568, weakly similar to TRANSLATION INITIATION FACTOR IF-2 Length = 2347 Score = 48.1 bits (24), Expect = 0.064 Identities = 24/24 (100%) Strand = Plus / Minus Query: 910 aactgtgctgctgaaacagtttca 933 |||||||||||||||||||||||| Sbjct: 1137 aactgtgctgctgaaacagtttca 1114
>dbj|AK001783.1| Homo sapiens cDNA FLJ10921 fis, clone OVARC1000411 Length = 1784 Score = 48.1 bits (24), Expect = 0.064 Identities = 24/24 (100%) Strand = Plus / Minus Query: 910 aactgtgctgctgaaacagtttca 933 |||||||||||||||||||||||| Sbjct: 574 aactgtgctgctgaaacagtttca 551
>gb|BC028415.1| Homo sapiens cancer susceptibility candidate 1, mRNA (cDNA clone MGC:33578 IMAGE:4823620), complete cds Length = 2464 Score = 48.1 bits (24), Expect = 0.064 Identities = 24/24 (100%) Strand = Plus / Minus Query: 910 aactgtgctgctgaaacagtttca 933 |||||||||||||||||||||||| Sbjct: 1300 aactgtgctgctgaaacagtttca 1277
>gb|BC031047.1| Homo sapiens cancer susceptibility candidate 1, mRNA (cDNA clone IMAGE:5270474) Length = 2377 Score = 48.1 bits (24), Expect = 0.064 Identities = 24/24 (100%) Strand = Plus / Minus Query: 910 aactgtgctgctgaaacagtttca 933 |||||||||||||||||||||||| Sbjct: 1150 aactgtgctgctgaaacagtttca 1127
>dbj|AB168925.1| Macaca fascicularis testis cDNA, clone: QtsA-15847, similar to human cancer susceptibility candidate 1 (CASC1), mRNA, RefSeq: NM_018272.2 Length = 2384 Score = 48.1 bits (24), Expect = 0.064 Identities = 24/24 (100%) Strand = Plus / Minus Query: 910 aactgtgctgctgaaacagtttca 933 |||||||||||||||||||||||| Sbjct: 1148 aactgtgctgctgaaacagtttca 1125
>emb|AJ291743.1|NTA291743 Nicotiana tabacum partial mRNA for putative beta7 proteasome subunit (b7 gene) Length = 389 Score = 48.1 bits (24), Expect = 0.064 Identities = 30/32 (93%) Strand = Plus / Plus Query: 428 atgtgggatgatgggaactcattgggccccaa 459 |||||||||||||||||||| ||||| ||||| Sbjct: 149 atgtgggatgatgggaactccttgggtcccaa 180
>ref|XM_813279.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506859.240) partial mRNA Length = 1575 Score = 48.1 bits (24), Expect = 0.064 Identities = 27/28 (96%) Strand = Plus / Minus Query: 65 accaccatccccagccccagccccagcc 92 ||||||| |||||||||||||||||||| Sbjct: 1086 accaccagccccagccccagccccagcc 1059
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 48.1 bits (24), Expect = 0.064 Identities = 27/28 (96%) Strand = Plus / Plus Query: 236 attgcaatgaaatacaaggatggtgtga 263 |||||| ||||||||||||||||||||| Sbjct: 26256543 attgcactgaaatacaaggatggtgtga 26256570
>gb|AC002091.2| Homo sapiens chromosome 17, clone CTB-41I6, complete sequence Length = 161816 Score = 48.1 bits (24), Expect = 0.064 Identities = 24/24 (100%) Strand = Plus / Plus Query: 69 ccatccccagccccagccccagcc 92 |||||||||||||||||||||||| Sbjct: 18078 ccatccccagccccagccccagcc 18101
>emb|AL953889.9| Human DNA sequence from clone RP11-7G23 on chromosome 9 Contains six novel pseudogenes, the FAM27A gene for family with sequence similarity 27, member A, a novel gene and five CpG islands, complete sequence Length = 160730 Score = 48.1 bits (24), Expect = 0.064 Identities = 24/24 (100%) Strand = Plus / Plus Query: 69 ccatccccagccccagccccagcc 92 |||||||||||||||||||||||| Sbjct: 86895 ccatccccagccccagccccagcc 86918
>emb|AL645608.30| Human DNA sequence from clone RP11-54O7 on chromosome 1 Contains three novel genes, a novel gene (MGC45873), a novel gene (DKFZP564C186), a novel gene, a novel gene (DKFZP434H2010), a novel gene (MGC13275), the gene for bHLH factor Hes4 (Hes4), a ribosomal protein L39 (RPL39) pseudogene, a novel gene, the G1P2 gene for interferon alpha-inducible protein (clone IFI-15K), the AGRN gene for agrin, two novel genes and fifteen CpG islands, complete sequence Length = 186759 Score = 48.1 bits (24), Expect = 0.064 Identities = 24/24 (100%) Strand = Plus / Plus Query: 73 ccccagccccagccccagccgagc 96 |||||||||||||||||||||||| Sbjct: 157664 ccccagccccagccccagccgagc 157687
>emb|AL627230.15| Human DNA sequence from clone RP11-12A20 on chromosome 9 Contains six novel pseudogenes, the FAM27B gene for family with sequence similarity 27, member B, a pseudogene similar to part of ribosomal protein L10 (RPL10) and four CpG islands, complete sequence Length = 194246 Score = 48.1 bits (24), Expect = 0.064 Identities = 24/24 (100%) Strand = Plus / Plus Query: 69 ccatccccagccccagccccagcc 92 |||||||||||||||||||||||| Sbjct: 96335 ccatccccagccccagccccagcc 96358
>emb|AL391987.15| Human DNA sequence from clone RP11-374M1 on chromosome 9 Contains the FAM27C gene for family with sequence similarity 27, member C, three novel genes, five novel pseudogenes and six CpG islands, complete sequence Length = 202081 Score = 48.1 bits (24), Expect = 0.064 Identities = 24/24 (100%) Strand = Plus / Plus Query: 69 ccatccccagccccagccccagcc 92 |||||||||||||||||||||||| Sbjct: 168539 ccatccccagccccagccccagcc 168562
>emb|AL596182.28| Mouse DNA sequence from clone RP23-303F24 on chromosome 11 Contains a pseudogene similar to part of glyceraldehyde-3-phosphate dehydrogenase (Gapd), the Irf1 gene for interferon regulatory factor 1, a novel gene, the Slc22a5 gene for solute carrier family 22 (organic cation transporter) member 5, a ribosomal protein L27a (Rpl27a) pseudogene, a cyclin-dependent kinase 4 (Cdk4) pseudogene and two CpG islands, complete sequence Length = 191494 Score = 48.1 bits (24), Expect = 0.064 Identities = 24/24 (100%) Strand = Plus / Minus Query: 69 ccatccccagccccagccccagcc 92 |||||||||||||||||||||||| Sbjct: 89456 ccatccccagccccagccccagcc 89433
>gb|AC118598.8| Mus musculus chromosome 5, clone RP23-446M13, complete sequence Length = 186276 Score = 48.1 bits (24), Expect = 0.064 Identities = 24/24 (100%) Strand = Plus / Minus Query: 69 ccatccccagccccagccccagcc 92 |||||||||||||||||||||||| Sbjct: 65621 ccatccccagccccagccccagcc 65598 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 ccatccccagccccagcccca 89 ||||||||||||||||||||| Sbjct: 65639 ccatccccagccccagcccca 65619
>gb|AC161198.5| Mus musculus chromosome 15, clone RP23-34E23, complete sequence Length = 237801 Score = 48.1 bits (24), Expect = 0.064 Identities = 24/24 (100%) Strand = Plus / Minus Query: 69 ccatccccagccccagccccagcc 92 |||||||||||||||||||||||| Sbjct: 2264 ccatccccagccccagccccagcc 2241 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 ccccagccccagccccagccgagcc 97 |||||||||||||||||||| |||| Sbjct: 2236 ccccagccccagccccagcccagcc 2212
>gb|AC137764.6| Mus musculus chromosome 3, clone RP24-512E12, complete sequence Length = 148074 Score = 48.1 bits (24), Expect = 0.064 Identities = 27/28 (96%) Strand = Plus / Plus Query: 65 accaccatccccagccccagccccagcc 92 ||||||| |||||||||||||||||||| Sbjct: 69325 accaccagccccagccccagccccagcc 69352
>gb|AC003695.1|AC003695 Homo sapiens chromosome 17, clone hRPC.859_O_20, complete sequence Length = 115199 Score = 48.1 bits (24), Expect = 0.064 Identities = 24/24 (100%) Strand = Plus / Minus Query: 69 ccatccccagccccagccccagcc 92 |||||||||||||||||||||||| Sbjct: 58694 ccatccccagccccagccccagcc 58671
>emb|AL118524.25|HSJ1059A9 Human DNA sequence from clone RP5-1059A9 on chromosome 9. Contains two putative novel genes, ESTs, STSs and GSSs, complete sequence Length = 99858 Score = 48.1 bits (24), Expect = 0.064 Identities = 24/24 (100%) Strand = Plus / Minus Query: 69 ccatccccagccccagccccagcc 92 |||||||||||||||||||||||| Sbjct: 20631 ccatccccagccccagccccagcc 20608
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 46.1 bits (23), Expect = 0.25 Identities = 23/23 (100%) Strand = Plus / Plus Query: 75 ccagccccagccccagccgagcc 97 ||||||||||||||||||||||| Sbjct: 2755185 ccagccccagccccagccgagcc 2755207
>gb|AC112706.2| Homo sapiens chromosome 19 clone CTD-3195E18, complete sequence Length = 65069 Score = 46.1 bits (23), Expect = 0.25 Identities = 26/27 (96%) Strand = Plus / Plus Query: 66 ccaccatccccagccccagccccagcc 92 |||||| |||||||||||||||||||| Sbjct: 30796 ccaccagccccagccccagccccagcc 30822 Score = 46.1 bits (23), Expect = 0.25 Identities = 26/27 (96%) Strand = Plus / Plus Query: 66 ccaccatccccagccccagccccagcc 92 |||||| |||||||||||||||||||| Sbjct: 30982 ccaccagccccagccccagccccagcc 31008 Score = 46.1 bits (23), Expect = 0.25 Identities = 26/27 (96%) Strand = Plus / Plus Query: 66 ccaccatccccagccccagccccagcc 92 |||||| |||||||||||||||||||| Sbjct: 31262 ccaccagccccagccccagccccagcc 31288 Score = 46.1 bits (23), Expect = 0.25 Identities = 26/27 (96%) Strand = Plus / Plus Query: 66 ccaccatccccagccccagccccagcc 92 |||||| |||||||||||||||||||| Sbjct: 31386 ccaccagccccagccccagccccagcc 31412 Score = 46.1 bits (23), Expect = 0.25 Identities = 26/27 (96%) Strand = Plus / Plus Query: 66 ccaccatccccagccccagccccagcc 92 |||||| |||||||||||||||||||| Sbjct: 31876 ccaccagccccagccccagccccagcc 31902
>gb|AC010768.10| Homo sapiens chromosome 11, clone RP11-58K22, complete sequence Length = 192391 Score = 46.1 bits (23), Expect = 0.25 Identities = 26/27 (96%) Strand = Plus / Minus Query: 66 ccaccatccccagccccagccccagcc 92 |||||| |||||||||||||||||||| Sbjct: 41554 ccaccagccccagccccagccccagcc 41528
>gb|AC011199.22| Homo sapiens chromosome 3 clone RP11-61K12, complete sequence Length = 152135 Score = 46.1 bits (23), Expect = 0.25 Identities = 23/23 (100%) Strand = Plus / Plus Query: 70 catccccagccccagccccagcc 92 ||||||||||||||||||||||| Sbjct: 56040 catccccagccccagccccagcc 56062
>gb|AC130566.7| Homo sapiens 3 BAC RP11-61K12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 91240 Score = 46.1 bits (23), Expect = 0.25 Identities = 23/23 (100%) Strand = Plus / Minus Query: 70 catccccagccccagccccagcc 92 ||||||||||||||||||||||| Sbjct: 34861 catccccagccccagccccagcc 34839
>emb|AL355836.3|CNS05TCQ Human chromosome 14 DNA sequence BAC R-8L8 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 166894 Score = 46.1 bits (23), Expect = 0.25 Identities = 23/23 (100%) Strand = Plus / Plus Query: 69 ccatccccagccccagccccagc 91 ||||||||||||||||||||||| Sbjct: 84858 ccatccccagccccagccccagc 84880
>emb|AL805960.10| Mouse DNA sequence from clone RP23-20P17 on chromosome X, complete sequence Length = 172780 Score = 46.1 bits (23), Expect = 0.25 Identities = 23/23 (100%) Strand = Plus / Minus Query: 69 ccatccccagccccagccccagc 91 ||||||||||||||||||||||| Sbjct: 151533 ccatccccagccccagccccagc 151511
>ref|XM_001219879.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_00659) mRNA, complete cds Length = 720 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 67 caccatccccagccccagccccagcc 92 ||||| |||||||||||||||||||| Sbjct: 571 caccacccccagccccagccccagcc 546
>gb|AC162448.10| Mus musculus chromosome 1, clone RP24-405F23, complete sequence Length = 180366 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 67 caccatccccagccccagccccagcc 92 ||||| |||||||||||||||||||| Sbjct: 97924 caccagccccagccccagccccagcc 97899
>ref|XM_875888.1| PREDICTED: Bos taurus similar to vesicle amine transport protein 1, transcript variant 3 (LOC510698), mRNA Length = 2365 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 679 tgaggacatgacttttgaagaagctg 704 ||||| |||||||||||||||||||| Sbjct: 234 tgaggccatgacttttgaagaagctg 259
>ref|XM_587873.2| PREDICTED: Bos taurus similar to vesicle amine transport protein 1, transcript variant 1 (LOC510698), mRNA Length = 2654 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 679 tgaggacatgacttttgaagaagctg 704 ||||| |||||||||||||||||||| Sbjct: 523 tgaggccatgacttttgaagaagctg 548
>gb|AC139039.9| Mus musculus chromosome 16, clone RP23-300H4, complete sequence Length = 202308 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 67 caccatccccagccccagccccagcc 92 ||||| |||||||||||||||||||| Sbjct: 173427 caccagccccagccccagccccagcc 173452
>ref|XM_855468.1| PREDICTED: Canis familiaris similar to archain, transcript variant 2 (LOC479415), mRNA Length = 3323 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 79 ccccagccccagccgagccgag 100 |||||||||||||||||||||| Sbjct: 58 ccccagccccagccgagccgag 79
>ref|XM_536552.2| PREDICTED: Canis familiaris similar to archain, transcript variant 1 (LOC479415), mRNA Length = 3308 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 79 ccccagccccagccgagccgag 100 |||||||||||||||||||||| Sbjct: 58 ccccagccccagccgagccgag 79
>gb|AC131961.1| Drosophila pseudoobscura FOSMID DPSF1-548A3 (Children's Hospital Oakland Research Institute Drosophila pseudoobscura FOSMID Library) complete sequence Length = 39990 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 69 ccatccccagccccagccccag 90 |||||||||||||||||||||| Sbjct: 38857 ccatccccagccccagccccag 38836
>gb|AC114930.2| Homo sapiens chromosome 5 clone CTD-2017A19, complete sequence Length = 100233 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 617 aatcacattgccactggatttg 638 |||||||||||||||||||||| Sbjct: 418 aatcacattgccactggatttg 397
>gb|AC118456.2| Homo sapiens chromosome 5 clone CTD-2288B6, complete sequence Length = 121822 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 617 aatcacattgccactggatttg 638 |||||||||||||||||||||| Sbjct: 15896 aatcacattgccactggatttg 15917
>dbj|AK083019.1| Mus musculus 12 days embryo spinal cord cDNA, RIKEN full-length enriched library, clone:C530034A12 product:unclassifiable, full insert sequence Length = 3402 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 67 caccatccccagccccagccccagcc 92 ||||| |||||||||||||||||||| Sbjct: 1092 caccagccccagccccagccccagcc 1067
>dbj|AK078512.1| Mus musculus 12 days embryo female mullerian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6820427H12 product:lysyl oxidase-like, full insert sequence Length = 3147 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 73 ccccagccccagccccagccga 94 |||||||||||||||||||||| Sbjct: 1115 ccccagccccagccccagccga 1136
>gb|AF092915.1|AF092915 Nicotiana tabacum cytochrome P450-dependent fatty acid hydroxylase (CYP94A4) mRNA, complete cds Length = 1722 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 690 cttttgaagaagctgttaagct 711 |||||||||||||||||||||| Sbjct: 686 cttttgaagaagctgttaagct 707
>emb|AL390198.17| Human DNA sequence from clone RP13-401N8 on chromosome 20 Contains three novel genes, a vomeronasal organ phermone receptor family pseudogene, a novel zinc-finger pseudogene and nine CpG islands, complete sequence Length = 167717 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 67 caccatccccagccccagccccagcc 92 ||||| |||||||||||||||||||| Sbjct: 135361 caccagccccagccccagccccagcc 135386
>emb|AL359873.11| Human DNA sequence from clone RP4-704D23 on chromosome 1p36.11-36.23 Contains a novel gene, complete sequence Length = 86743 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 72 tccccagccccagccccagccgagcc 97 ||||||||||||||||||||| |||| Sbjct: 6714 tccccagccccagccccagcccagcc 6689
>emb|AL356215.11| Human DNA sequence from clone RP4-607I7 on chromosome 11p11.2-12 Contains the start of the CD44 (CD44 antigen (homing function andnIndian blood group system)) gene, ESTs, STSs, GSSs and a CpG island, complete sequence Length = 150533 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 71 atccccagccccagccccagcc 92 |||||||||||||||||||||| Sbjct: 18217 atccccagccccagccccagcc 18238
>gb|AC127285.4| Mus musculus BAC clone RP23-336P20 from chromosome 8, complete sequence Length = 232127 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 71 atccccagccccagccccagcc 92 |||||||||||||||||||||| Sbjct: 101614 atccccagccccagccccagcc 101593 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 ccccagccccagccccagccgagcc 97 |||||||||||||||||||| |||| Sbjct: 101559 ccccagccccagccccagcccagcc 101535 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 ccccagccccagccccagccgagcc 97 |||||||||||||||||||| |||| Sbjct: 101594 ccccagccccagccccagcccagcc 101570
>gb|AF250504.1|AF250504 Treponema pallidum clone N(UNC)#5 TprK (tprK) gene, complete cds Length = 1527 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 73 ccccagccccagccccagccga 94 |||||||||||||||||||||| Sbjct: 1199 ccccagccccagccccagccga 1220
>gb|AC092275.3| Homo sapiens chromosome 16 clone CTC-786C10, complete sequence Length = 191996 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 67 caccatccccagccccagccccagcc 92 ||||| |||||||||||||||||||| Sbjct: 97831 caccagccccagccccagccccagcc 97856 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 ccccagccccagccccagccg 93 ||||||||||||||||||||| Sbjct: 97843 ccccagccccagccccagccg 97863
>emb|AL805980.28| Mouse DNA sequence from clone RP23-49C8 on chromosome X, complete sequence Length = 172618 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 67 caccatccccagccccagccccagcc 92 ||||| |||||||||||||||||||| Sbjct: 147302 caccagccccagccccagccccagcc 147277
>gb|AC007993.15|AC007993 Homo sapiens chromosome 17, clone RP11-527L4, complete sequence Length = 141704 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 71 atccccagccccagccccagcc 92 |||||||||||||||||||||| Sbjct: 60132 atccccagccccagccccagcc 60153
>emb|AM157181.1| Sus scrofa RETN gene for resistin, exons 1-4 Length = 2649 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 67 caccatccccagccccagccccagcc 92 ||||| |||||||||||||||||||| Sbjct: 913 caccagccccagccccagccccagcc 938
>emb|AM157180.1| Sus scrofa RETN gene for resistin Length = 2664 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 67 caccatccccagccccagccccagcc 92 ||||| |||||||||||||||||||| Sbjct: 914 caccagccccagccccagccccagcc 939
>emb|AL845521.9| Mouse DNA sequence from clone RP23-359C5 on chromosome 2, complete sequence Length = 128641 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 67 caccatccccagccccagccccagcc 92 ||||| |||||||||||||||||||| Sbjct: 73000 caccagccccagccccagccccagcc 72975
>gb|AC004490.1|AC004490 Homo sapiens chromosome 19, cosmid R29381, complete sequence Length = 39143 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 67 caccatccccagccccagccccagcc 92 ||||| |||||||||||||||||||| Sbjct: 578 caccagccccagccccagccccagcc 603
>emb|AL663028.12| Mouse DNA sequence from clone RP23-23J11 on chromosome 2, complete sequence Length = 110275 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 67 caccatccccagccccagccccagcc 92 ||||| |||||||||||||||||||| Sbjct: 17386 caccagccccagccccagccccagcc 17411 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 67 caccatccccagccccagccccagcc 92 ||||| |||||||||||||||||||| Sbjct: 17421 caccagccccagccccagccccagcc 17446
>ref|NM_013370.3| Homo sapiens oxidative stress induced growth inhibitor 1 (OSGIN1), transcript variant 1, mRNA Length = 2409 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 accatccccagccccagccccagcc 92 |||| |||||||||||||||||||| Sbjct: 484 accagccccagccccagccccagcc 508
>gb|CP000481.1| Acidothermus cellulolyticus 11B, complete genome Length = 2443540 Score = 42.1 bits (21), Expect = 4.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 64 gaccaccatccccagccccagccccagcc 92 |||| ||| |||||||||||||||||||| Sbjct: 668255 gacccccagccccagccccagccccagcc 668283
>ref|XM_001223183.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_03970) mRNA, complete cds Length = 5733 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 tccccagccccagccccagcc 92 ||||||||||||||||||||| Sbjct: 4799 tccccagccccagccccagcc 4779
>ref|XM_001219966.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_00746) mRNA, complete cds Length = 5145 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 74 cccagccccagccccagccga 94 ||||||||||||||||||||| Sbjct: 4627 cccagccccagccccagccga 4607
>ref|XM_778933.2| PREDICTED: Strongylocentrotus purpuratus similar to high mobility group protein 1; HMG1 (LOC578784), mRNA Length = 1043 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 tccccagccccagccccagcc 92 ||||||||||||||||||||| Sbjct: 794 tccccagccccagccccagcc 814
>ref|XM_001203148.1| PREDICTED: Strongylocentrotus purpuratus similar to high mobility group protein 1; HMG1 (LOC578784), mRNA Length = 1043 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 tccccagccccagccccagcc 92 ||||||||||||||||||||| Sbjct: 794 tccccagccccagccccagcc 814
>dbj|AK235184.1| Sus scrofa mRNA, clone:OVRM10056C05, expressed in ovary Length = 2373 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 ccccagccccagccccagccgagcc 97 |||||||||||||||||||| |||| Sbjct: 1497 ccccagccccagccccagcccagcc 1521
>gb|CP000441.1| Burkholderia cepacia AMMD chromosome 2, complete sequence Length = 2646969 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 ccccagccccagccccagccg 93 ||||||||||||||||||||| Sbjct: 1822420 ccccagccccagccccagccg 1822400
>ref|XM_001149613.1| PREDICTED: Pan troglodytes hypothetical protein LOC746152 (LOC746152), mRNA Length = 3226 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 accatccccagccccagccccagcc 92 |||| |||||||||||||||||||| Sbjct: 1250 accagccccagccccagccccagcc 1274
>ref|XM_001165487.1| PREDICTED: Pan troglodytes hypothetical LOC460623, transcript variant 1 (LOC460623), mRNA Length = 2112 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 ccccagccccagccccagccg 93 ||||||||||||||||||||| Sbjct: 1483 ccccagccccagccccagccg 1463
>ref|XM_516684.2| PREDICTED: Pan troglodytes hypothetical LOC460623, transcript variant 3 (LOC460623), mRNA Length = 2030 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 ccccagccccagccccagccg 93 ||||||||||||||||||||| Sbjct: 1401 ccccagccccagccccagccg 1381
>ref|XM_001165524.1| PREDICTED: Pan troglodytes hypothetical LOC460623, transcript variant 2 (LOC460623), mRNA Length = 1996 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 ccccagccccagccccagccg 93 ||||||||||||||||||||| Sbjct: 1367 ccccagccccagccccagccg 1347
>gb|DQ893844.1| Homo sapiens clone FLH164895.01L; RZPDo839D05157D HCLS1 mRNA, partial sequence Length = 1461 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 ccccagccccagccccagccg 93 ||||||||||||||||||||| Sbjct: 1276 ccccagccccagccccagccg 1256
>gb|DQ890664.1| Synthetic construct Homo sapiens clone FLH164899.01X; RZPDo839D05158D HCLS1 mRNA, complete sequence Length = 1461 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 ccccagccccagccccagccg 93 ||||||||||||||||||||| Sbjct: 1276 ccccagccccagccccagccg 1256
>gb|AC187575.2| Pongo pygmaeus abelii BAC clone CH276-12H12 from chromosome unknown, complete sequence Length = 210860 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 68 accatccccagccccagccccagcc 92 |||| |||||||||||||||||||| Sbjct: 85076 accagccccagccccagccccagcc 85052
>gb|AE014134.5| Drosophila melanogaster chromosome 2L, complete sequence Length = 23011544 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 74 cccagccccagccccagccga 94 ||||||||||||||||||||| Sbjct: 858021 cccagccccagccccagccga 858001
>gb|BC113623.1| Homo sapiens atonal homolog 1 (Drosophila), mRNA (cDNA clone MGC:142183 IMAGE:8322675), complete cds Length = 1180 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 62 gagaccaccatccccagccccagcc 86 |||||||||||| |||||||||||| Sbjct: 86 gagaccaccatcgccagccccagcc 110
>gb|BC113625.1| Homo sapiens atonal homolog 1 (Drosophila), mRNA (cDNA clone MGC:142185 IMAGE:8322677), complete cds Length = 1180 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 62 gagaccaccatccccagccccagcc 86 |||||||||||| |||||||||||| Sbjct: 86 gagaccaccatcgccagccccagcc 110
>ref|XM_001077332.1| PREDICTED: Rattus norvegicus adenylate cyclase 9 (predicted) (Adcy9_predicted), mRNA Length = 6399 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 tccccagccccagccccagcc 92 ||||||||||||||||||||| Sbjct: 6208 tccccagccccagccccagcc 6228
>ref|XM_220178.4| PREDICTED: Rattus norvegicus adenylate cyclase 9 (predicted) (Adcy9_predicted), mRNA Length = 4766 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 tccccagccccagccccagcc 92 ||||||||||||||||||||| Sbjct: 4566 tccccagccccagccccagcc 4586
>ref|XM_001102247.1| PREDICTED: Macaca mulatta similar to Atonal protein homolog 1 (Helix-loop-helix protein hATH-1) (ATOH1), mRNA Length = 1065 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 62 gagaccaccatccccagccccagcc 86 |||||||||||| |||||||||||| Sbjct: 50 gagaccaccatcgccagccccagcc 74
>gb|CP000386.1| Rubrobacter xylanophilus DSM 9941, complete genome Length = 3225748 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 71 atccccagccccagccccagc 91 ||||||||||||||||||||| Sbjct: 1247690 atccccagccccagccccagc 1247670
>emb|CR376840.30| Zebrafish DNA sequence from clone CH211-185M11 in linkage group 23, complete sequence Length = 128526 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 20 tgtcttctcttcttcacgaggaaga 44 ||||| ||||||||||||||||||| Sbjct: 92510 tgtctactcttcttcacgaggaaga 92534
>ref|NM_148507.1| Arabidopsis thaliana unknown protein (AT1G34315) mRNA, complete cds Length = 819 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 23 cttctcttcttcacgaggaagaaag 47 |||||||||||| |||||||||||| Sbjct: 114 cttctcttcttctcgaggaagaaag 90
>ref|NM_001012432.1| Pan troglodytes atonal homolog 1 (Drosophila) (ATOH1), mRNA gb|AY665249.1| Pan troglodytes atonal 1 mRNA, complete cds Length = 1071 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 62 gagaccaccatccccagccccagcc 86 |||||||||||| |||||||||||| Sbjct: 50 gagaccaccatcgccagccccagcc 74
>gb|AC122005.3| Mus musculus chromosome 5 clone RP24-340B11, complete sequence Length = 183264 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 ccccagccccagccccagccgagcc 97 |||||||||||||||||||| |||| Sbjct: 84160 ccccagccccagccccagcccagcc 84136 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 ccccagccccagccccagccgagcc 97 |||||||||||||||||||| |||| Sbjct: 84201 ccccagccccagccccagcccagcc 84177
>ref|NM_005172.1| Homo sapiens atonal homolog 1 (Drosophila) (ATOH1), mRNA Length = 1065 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 62 gagaccaccatccccagccccagcc 86 |||||||||||| |||||||||||| Sbjct: 50 gagaccaccatcgccagccccagcc 74
>gb|AY360386.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0017M13, complete sequence Length = 161902 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 accatccccagccccagccccagcc 92 |||| |||||||||||||||||||| Sbjct: 113449 accaaccccagccccagccccagcc 113473
>ref|NM_028227.2| Mus musculus BRCA1 associated protein (Brap), mRNA Length = 3727 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 ccccagccccagccccagccg 93 ||||||||||||||||||||| Sbjct: 3330 ccccagccccagccccagccg 3310
>ref|XM_881285.1| PREDICTED: Bos taurus hypothetical protein LOC616146 (LOC616146), mRNA Length = 639 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 ccccagccccagccccagccg 93 ||||||||||||||||||||| Sbjct: 4 ccccagccccagccccagccg 24
>gb|BC069578.1| Homo sapiens atonal homolog 1 (Drosophila), mRNA (cDNA clone IMAGE:7262382), partial cds Length = 1060 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 62 gagaccaccatccccagccccagcc 86 |||||||||||| |||||||||||| Sbjct: 45 gagaccaccatcgccagccccagcc 69
>gb|AC092222.2| Drosophila melanogaster clone BACR16I01, complete sequence Length = 165697 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 74 cccagccccagccccagccga 94 ||||||||||||||||||||| Sbjct: 108593 cccagccccagccccagccga 108613
>gb|AC102745.10| Mus musculus chromosome 17, clone RP24-371L2, complete sequence Length = 189211 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 tccccagccccagccccagcc 92 ||||||||||||||||||||| Sbjct: 115048 tccccagccccagccccagcc 115028
>gb|AC091454.2| Mus musculus chromosome X, clones RP21-438P10, RP21-382F2, RP21-118B24, Map qA7.1, complete sequences Length = 393632 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 ccccagccccagccccagccgagcc 97 |||||||||||||||||||| |||| Sbjct: 146121 ccccagccccagccccagcccagcc 146097 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 ccccagccccagccccagccgagcc 97 |||||||||||||||||||| |||| Sbjct: 146215 ccccagccccagccccagcccagcc 146191
>gb|BC069145.1| Homo sapiens atonal homolog 1 (Drosophila), mRNA (cDNA clone MGC:95430 IMAGE:7217005), complete cds Length = 1066 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 62 gagaccaccatccccagccccagcc 86 |||||||||||| |||||||||||| Sbjct: 51 gagaccaccatcgccagccccagcc 75
>ref|NM_010729.2| Mus musculus lysyl oxidase-like 1 (Loxl1), mRNA gb|BC037999.1| Mus musculus lysyl oxidase-like 1, mRNA (cDNA clone MGC:46960 IMAGE:5251968), complete cds Length = 2460 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 ccccagccccagccccagccg 93 ||||||||||||||||||||| Sbjct: 1112 ccccagccccagccccagccg 1132
>ref|NM_005335.3| Homo sapiens hematopoietic cell-specific Lyn substrate 1 (HCLS1), mRNA gb|BC016758.2| Homo sapiens hematopoietic cell-specific Lyn substrate 1, mRNA (cDNA clone MGC:1442 IMAGE:2966303), complete cds Length = 2029 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 ccccagccccagccccagccg 93 ||||||||||||||||||||| Sbjct: 1325 ccccagccccagccccagccg 1305
>gb|AC091395.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-288L22, complete sequence Length = 163323 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 ccccagccccagccccagccgagcc 97 |||||||||||||||||||| |||| Sbjct: 25954 ccccagccccagccccagcccagcc 25978 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 ccccagccccagccccagccgagcc 97 |||||||||||||||||||| |||| Sbjct: 26208 ccccagccccagccccagcccagcc 26232
>gb|AC112143.5| Mus musculus BAC clone RP23-29E2 from chromosome 2, complete sequence Length = 205920 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 ccccagccccagccccagccgagcc 97 |||||||||||||||||||| |||| Sbjct: 158034 ccccagccccagccccagcctagcc 158058
>gb|AC102312.11| Mus musculus chromosome 10, clone RP24-428L4, complete sequence Length = 182940 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 ccatccccagccccagcccca 89 ||||||||||||||||||||| Sbjct: 52 ccatccccagccccagcccca 72
>gb|AC120411.9| Mus musculus chromosome 6, clone RP24-447O2, complete sequence Length = 202938 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 tccccagccccagccccagcc 92 ||||||||||||||||||||| Sbjct: 115388 tccccagccccagccccagcc 115408
>gb|AY190956.1| Drosophila virilis clone DVIF01_06_H02 (D1438) genomic sequence Length = 46427 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 ccccagccccagccccagccg 93 ||||||||||||||||||||| Sbjct: 31547 ccccagccccagccccagccg 31527
>ref|XM_846038.1| PREDICTED: Canis familiaris hypothetical protein LOC608892 (LOC608892), mRNA Length = 1017 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 tccccagccccagccccagcc 92 ||||||||||||||||||||| Sbjct: 878 tccccagccccagccccagcc 898
>ref|XM_534562.2| PREDICTED: Canis familiaris similar to kinesin family member 13B, transcript variant 1 (LOC477369), mRNA Length = 5571 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 ccccagccccagccccagccg 93 ||||||||||||||||||||| Sbjct: 5036 ccccagccccagccccagccg 5056
>ref|XM_851754.1| PREDICTED: Canis familiaris similar to kinesin family member 13B, transcript variant 2 (LOC477369), mRNA Length = 5625 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 ccccagccccagccccagccg 93 ||||||||||||||||||||| Sbjct: 5090 ccccagccccagccccagccg 5110
>gb|BC003973.1| Mus musculus lysyl oxidase-like 1, mRNA (cDNA clone IMAGE:3488791), partial cds Length = 1557 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 ccccagccccagccccagccg 93 ||||||||||||||||||||| Sbjct: 183 ccccagccccagccccagccg 203
>gb|AC099341.4| Homo sapiens BAC clone RP11-317C13 from 7, complete sequence Length = 51939 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 tccccagccccagccccagcc 92 ||||||||||||||||||||| Sbjct: 43510 tccccagccccagccccagcc 43530
>ref|XM_848807.1| PREDICTED: Canis familiaris similar to Dedicator of cytokinesis protein 6 (LOC611163), mRNA Length = 8988 Score = 42.1 bits (21), Expect = 4.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 64 gaccaccatccccagccccagccccagcc 92 |||| ||| |||||||||||||||||||| Sbjct: 7123 gacccccagccccagccccagccccagcc 7151
>gb|AY504961.1| Homo sapiens tumor necrosis factor receptor superfamily, member 7 (TNFRSF7) gene, complete cds Length = 10529 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 accatccccagccccagccccagcc 92 |||| |||||||||||||||||||| Sbjct: 5827 accaaccccagccccagccccagcc 5851
>ref|XM_538612.2| PREDICTED: Canis familiaris similar to fibrillin 2 precursor (LOC481491), mRNA Length = 10291 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 ccccagccccagccccagccg 93 ||||||||||||||||||||| Sbjct: 139 ccccagccccagccccagccg 159
>gb|AC133207.3| Mus musculus BAC clone RP23-116L23 from chromosome 10, complete sequence Length = 222101 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 tccccagccccagccccagcc 92 ||||||||||||||||||||| Sbjct: 87429 tccccagccccagccccagcc 87409
>gb|AC009119.10| Homo sapiens chromosome 16 clone RP11-483P21, complete sequence Length = 181020 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 accatccccagccccagccccagcc 92 |||| |||||||||||||||||||| Sbjct: 180487 accagccccagccccagccccagcc 180511
>gb|AC123921.3| Mus musculus BAC clone RP24-180J14 from chromosome 8, complete sequence Length = 183936 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 ccccagccccagccccagccg 93 ||||||||||||||||||||| Sbjct: 99188 ccccagccccagccccagccg 99168
>gb|AC133750.2| Homo sapiens 3 BAC RP11-619K22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 87386 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 ccccagccccagccccagccg 93 ||||||||||||||||||||| Sbjct: 3557 ccccagccccagccccagccg 3577
>gb|AC023141.6| Homo sapiens BAC clone RP11-548K12 from 7, complete sequence Length = 197637 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 68 accatccccagccccagccccagcc 92 |||| |||||||||||||||||||| Sbjct: 67119 accagccccagccccagccccagcc 67095
>gb|BC038490.1| Mus musculus BRCA1 associated protein, mRNA (cDNA clone MGC:47099 IMAGE:3599718), complete cds Length = 3135 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 ccccagccccagccccagccg 93 ||||||||||||||||||||| Sbjct: 2722 ccccagccccagccccagccg 2702
>gb|BC017145.1| Mus musculus arrestin 3, retinal, mRNA (cDNA clone MGC:28831 IMAGE:4506006), complete cds Length = 1706 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 tccccagccccagccccagcc 92 ||||||||||||||||||||| Sbjct: 839 tccccagccccagccccagcc 819
>gb|AC160976.2| Mus musculus BAC clone RP24-67M24 from chromosome 9, complete sequence Length = 184288 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 ccccagccccagccccagccg 93 ||||||||||||||||||||| Sbjct: 21435 ccccagccccagccccagccg 21455
>gb|AC103627.6| Mus musculus chromosome 1, clone RP24-241N3, complete sequence Length = 201487 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 tccccagccccagccccagcc 92 ||||||||||||||||||||| Sbjct: 130405 tccccagccccagccccagcc 130425
>gb|AC091624.3| Canis familiaris clone RP81-117B1, complete sequence Length = 174712 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 ccccagccccagccccagccg 93 ||||||||||||||||||||| Sbjct: 128578 ccccagccccagccccagccg 128598
>dbj|AK124015.1| Homo sapiens cDNA FLJ42021 fis, clone SPLEN2034448, highly similar to HEMATOPOIETIC LINEAGE CELL SPECIFIC PROTEIN Length = 2724 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 ccccagccccagccccagccg 93 ||||||||||||||||||||| Sbjct: 2091 ccccagccccagccccagccg 2071
>gb|AC093572.18| Pan troglodytes clone rp43-25g23, complete sequence Length = 195652 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 ccccagccccagccccagccgagcc 97 |||||||||||||||||||| |||| Sbjct: 170288 ccccagccccagccccagcccagcc 170312
>gb|BT008130.1| Synthetic construct Homo sapiens hematopoietic cell-specific Lyn substrate 1 mRNA, partial cds Length = 1461 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 ccccagccccagccccagccg 93 ||||||||||||||||||||| Sbjct: 1276 ccccagccccagccccagccg 1256
>gb|BT006824.1| Homo sapiens hematopoietic cell-specific Lyn substrate 1 mRNA, complete cds Length = 1461 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 ccccagccccagccccagccg 93 ||||||||||||||||||||| Sbjct: 1276 ccccagccccagccccagccg 1256
>gb|AY573556.1| Sus scrofa delta-5 fatty acid desaturase gene, partial cds Length = 1114 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 74 cccagccccagccccagccga 94 ||||||||||||||||||||| Sbjct: 948 cccagccccagccccagccga 928
>gb|AC136191.5| Rattus norvegicus BAC CH230-52I17 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 221923 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 ccccagccccagccccagccg 93 ||||||||||||||||||||| Sbjct: 23955 ccccagccccagccccagccg 23975
>ref|NR_001464.1| Bos taurus X (inactive)-specific transcript (XIST) on chromosome X Length = 34635 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 ccccagccccagccccagccgagcc 97 |||||||||||||||||||| |||| Sbjct: 2623 ccccagccccagccccagcccagcc 2647 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 ccccagccccagccccagccgagcc 97 |||||||||||||||||||| |||| Sbjct: 2723 ccccagccccagccccagcccagcc 2747
>dbj|AK143718.1| Mus musculus 6 days neonate spleen cDNA, RIKEN full-length enriched library, clone:F430012E22 product:BRCA1 associated protein, full insert sequence Length = 3529 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 ccccagccccagccccagccg 93 ||||||||||||||||||||| Sbjct: 3149 ccccagccccagccccagccg 3129
>dbj|AK138861.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430092M18 product:BRCA1 associated protein, full insert sequence Length = 4317 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 ccccagccccagccccagccg 93 ||||||||||||||||||||| Sbjct: 3937 ccccagccccagccccagccg 3917
>gb|AC129805.7| Homo sapiens 12 BAC RP11-125N22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 165378 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 68 accatccccagccccagccccagcc 92 |||| |||||||||||||||||||| Sbjct: 77877 accagccccagccccagccccagcc 77853
>gb|AC091495.4| Homo sapiens chromosome 18, clone RP11-894D23, complete sequence Length = 158458 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 tccccagccccagccccagcc 92 ||||||||||||||||||||| Sbjct: 81216 tccccagccccagccccagcc 81196
>gb|AC009899.12| Homo sapiens chromosome 18, clone RP11-19F9, complete sequence Length = 164359 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 tccccagccccagccccagcc 92 ||||||||||||||||||||| Sbjct: 163349 tccccagccccagccccagcc 163369
>gb|AC034259.7| Homo sapiens chromosome 11, clone RP11-138N3, complete sequence Length = 206192 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 tccccagccccagccccagcc 92 ||||||||||||||||||||| Sbjct: 58085 tccccagccccagccccagcc 58065
>gb|AC009879.8| Homo sapiens, clone RP11-346I3, complete sequence Length = 191352 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 tccccagccccagccccagcc 92 ||||||||||||||||||||| Sbjct: 146570 tccccagccccagccccagcc 146590
>gb|AC087889.15| Mus Musculus Strain C57BL6/J Chromosome 10 BAC, RP23-337L15, Complete Sequence, complete sequence Length = 215756 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 tccccagccccagccccagcc 92 ||||||||||||||||||||| Sbjct: 148537 tccccagccccagccccagcc 148517
>emb|CT010480.10| Mouse DNA sequence from clone RP23-313E11 on chromosome 13, complete sequence Length = 203636 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 ccccagccccagccccagccg 93 ||||||||||||||||||||| Sbjct: 77706 ccccagccccagccccagccg 77726
>gb|AC108487.2| Homo sapiens chromosome 3 clone RP11-733E24, complete sequence Length = 180925 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 532 ggtgcttggtggagtgaaaaa 552 ||||||||||||||||||||| Sbjct: 172223 ggtgcttggtggagtgaaaaa 172203
>dbj|AK034212.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length enriched library, clone:9330164E08 product:BRCA1 associated protein, full insert sequence Length = 2618 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 ccccagccccagccccagccg 93 ||||||||||||||||||||| Sbjct: 2287 ccccagccccagccccagccg 2267
>gb|AC091784.8| Genomic sequence for Mus musculus, clone RP23-213D23, complete sequence Length = 215410 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 tccccagccccagccccagcc 92 ||||||||||||||||||||| Sbjct: 146085 tccccagccccagccccagcc 146105
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 accatccccagccccagccccagcc 92 |||| |||||||||||||||||||| Sbjct: 13388976 accaaccccagccccagccccagcc 13389000
>gb|AC087413.5| Homo sapiens BAC clone RP11-680J17 from 4, complete sequence Length = 80701 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 62 gagaccaccatccccagccccagcc 86 |||||||||||| |||||||||||| Sbjct: 12664 gagaccaccatcgccagccccagcc 12688
>gb|AC011711.8| Homo sapiens chromosome 11, clone RP11-309J20, complete sequence Length = 149542 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 679 tgaggacatgacttttgaaga 699 ||||||||||||||||||||| Sbjct: 24349 tgaggacatgacttttgaaga 24369
>emb|AL935212.11| Human DNA sequence from clone RP11-160N1 on chromosome 9 Contains eight novel pseudogenes, two novel genes and three CpG islands, complete sequence Length = 181647 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 accatccccagccccagccccagcc 92 |||| |||||||||||||||||||| Sbjct: 156141 accagccccagccccagccccagcc 156165
>gb|AF357006.1|AF357006 Mus musculus lysyl oxidase-like 1 (Loxl1) mRNA, complete cds Length = 2013 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 ccccagccccagccccagccg 93 ||||||||||||||||||||| Sbjct: 889 ccccagccccagccccagccg 909
>emb|AL590989.15| Human DNA sequence from clone RP11-149P14 on chromosome 1 Contains a pseudogene similar to part of cytochrome b, the 5' end of a novel gene and a CpG island, complete sequence Length = 110121 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 tccccagccccagccccagcc 92 ||||||||||||||||||||| Sbjct: 58885 tccccagccccagccccagcc 58865
>emb|AL512324.14| Human DNA sequence from clone RP11-432I13 on chromosome 10 Contains the 3' end of a breast cancer antigen (NY-BR-1) pseudogene, the 3' end of a novel gene, a pseudogene similar to part of cubilin (intrinsic factor-cobalamin receptor, CUBN), a seven transmembrane helix receptor (FLJ31393) pseudogene, the OR13A1 gene for olfactory receptor family 13 subfamily A member 1 and two CpG islands, complete sequence Length = 168473 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 tccccagccccagccccagcc 92 ||||||||||||||||||||| Sbjct: 7120 tccccagccccagccccagcc 7100
>emb|AL365274.17| Human DNA sequence from clone RP11-298A17 on chromosome 9 Contains the DAB2IP gene for DAB2 interacting protein (AF9Q34, DIP1/2, KIAA1743) and four CpG islands, complete sequence Length = 171941 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 68 accatccccagccccagccccagcc 92 |||| |||||||||||||||||||| Sbjct: 103826 accagccccagccccagccccagcc 103802
>gb|AF424820.1|AF424820 Macaca mulatta neurexophilin 4 mRNA, partial cds Length = 332 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 tccccagccccagccccagcc 92 ||||||||||||||||||||| Sbjct: 243 tccccagccccagccccagcc 263
>gb|AC018375.8| Homo sapiens, clone RP11-3P24, complete sequence Length = 149951 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 679 tgaggacatgacttttgaaga 699 ||||||||||||||||||||| Sbjct: 143091 tgaggacatgacttttgaaga 143111
>emb|AL121895.26|HSA234K24 Human DNA sequence from clone RP11-234K24 on chromosome 20 Contains a novel gene, the 3' end of the EPB41L1 gene for the erythrocyte membrane protein band 4.1-like protein, the C20orf4 gene for chromosome 20 open reading frame 4 and a CpG island, complete sequence Length = 153192 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 tccccagccccagccccagcc 92 ||||||||||||||||||||| Sbjct: 132208 tccccagccccagccccagcc 132228
>emb|AL132655.13|HSJ806M20 Human DNA sequence from clone RP4-806M20 on chromosome 20 Contains a novel pseudogene, the 5' end of the GNAS complex locus and a CpG island, complete sequence Length = 126586 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 ccatccccagccccagcccca 89 ||||||||||||||||||||| Sbjct: 70607 ccatccccagccccagcccca 70587
>gb|AC157950.2| Mus musculus BAC clone RP23-128A23 from chromosome 9, complete sequence Length = 202301 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 ccccagccccagccccagccgagcc 97 |||||||||||||||||||| |||| Sbjct: 182969 ccccagccccagccccagcccagcc 182993
>gb|AC157996.2| Mus musculus BAC clone RP24-194J17 from chromosome 9, complete sequence Length = 158268 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 ccccagccccagccccagccgagcc 97 |||||||||||||||||||| |||| Sbjct: 22448 ccccagccccagccccagcccagcc 22472
>emb|Z92546.2|HS65A6 Human DNA sequence from clone CTA-65A6 on chromosome 22q11-12 Contains the 3' part of the gene for the ortholog of rat CAIN (KIAA0330), the gene for a novel Sushi domain (SCR repeat) containing protein similar to Mucins, ESTs, an STS, GSSs and two putative CpG islands, complete sequence Length = 73511 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 ccccagccccagccccagccgagcc 97 |||||||||||||||||||| |||| Sbjct: 61611 ccccagccccagccccagcccagcc 61635
>emb|X16663.1|HSHEAM Human HS1 gene for heamatopoietic lineage cell specific protein Length = 1968 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 ccccagccccagccccagccg 93 ||||||||||||||||||||| Sbjct: 1318 ccccagccccagccccagccg 1298
>emb|CR456794.1| Homo sapiens full open reading frame cDNA clone RZPDo834A0918D for gene HCLS1, hematopoietic cell-specific Lyn substrate 1; complete cds, incl. stopcodon Length = 1461 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 ccccagccccagccccagccg 93 ||||||||||||||||||||| Sbjct: 1276 ccccagccccagccccagccg 1256
>emb|AL513025.13| Mouse DNA sequence from clone RP23-235O1 on chromosome 13 Contains the 5' end of a novel gene, the E2f3 gene for E2F transcription factor 3, a novel gene and two CpG islands, complete sequence Length = 197940 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 tccccagccccagccccagcc 92 ||||||||||||||||||||| Sbjct: 177097 tccccagccccagccccagcc 177117
>gb|BC030384.1| Mus musculus BRCA1 associated protein, mRNA (cDNA clone IMAGE:5376472), with apparent retained intron Length = 2222 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 ccccagccccagccccagccg 93 ||||||||||||||||||||| Sbjct: 1807 ccccagccccagccccagccg 1787
>emb|BX000359.7| Mouse DNA sequence from clone RP23-343C18 on chromosome 11 Contains the gene for a novel helix-loop-helix DNA-binding domain containing protein, a novel gene, the Gosr1 gene for golgi SNAP receptor complex member 1 and a CpG island, complete sequence Length = 118586 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 ccccagccccagccccagccgagcc 97 |||||||||||||||||||| |||| Sbjct: 24393 ccccagccccagccccagcccagcc 24369
>emb|AL773510.5| Mouse DNA sequence from clone RP24-200F10 on chromosome 4 Contains a novel gene and a casein kinase II alpha 1 polypeptide (Csnk2a1) pseudogene, complete sequence Length = 134053 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 tccccagccccagccccagcc 92 ||||||||||||||||||||| Sbjct: 17478 tccccagccccagccccagcc 17458
>gb|AC116104.7| Mus musculus chromosome 5, clone RP23-18K20, complete sequence Length = 210459 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 ccccagccccagccccagccg 93 ||||||||||||||||||||| Sbjct: 104847 ccccagccccagccccagccg 104867
>gb|AC004923.2| Homo sapiens PAC clone RP5-901A4 from 11, complete sequence Length = 94851 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 tccccagccccagccccagcc 92 ||||||||||||||||||||| Sbjct: 3280 tccccagccccagccccagcc 3260
>gb|AF321921.1|AF321921 Mus musculus BRAP2 variant 2 mRNA, complete cds Length = 3862 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 ccccagccccagccccagccg 93 ||||||||||||||||||||| Sbjct: 3482 ccccagccccagccccagccg 3462
>gb|AC154576.2| Mus musculus BAC clone RP23-372B6 from chromosome 14, complete sequence Length = 152380 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 agccttattggagggagtggg 367 ||||||||||||||||||||| Sbjct: 37449 agccttattggagggagtggg 37429
>gb|AC093798.3| Homo sapiens BAC clone RP11-306N14 from 2, complete sequence Length = 233877 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 tccccagccccagccccagcc 92 ||||||||||||||||||||| Sbjct: 200796 tccccagccccagccccagcc 200776
>gb|AC079776.5| Homo sapiens BAC clone RP11-315H12 from 2, complete sequence Length = 198961 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 ccatccccagccccagcccca 89 ||||||||||||||||||||| Sbjct: 74486 ccatccccagccccagcccca 74466
>gb|AC093802.3| Homo sapiens BAC clone RP11-315F22 from 2, complete sequence Length = 165535 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 ccccagccccagccccagccgagcc 97 |||||||||||||||||||| |||| Sbjct: 40493 ccccagccccagccccagcccagcc 40517
>gb|AC005840.2|AC005840 Homo sapiens complete sequence of a PAC clone RP1-102E24 containing SYB1, CD27, and SCNN1A genes Length = 140026 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 68 accatccccagccccagccccagcc 92 |||| |||||||||||||||||||| Sbjct: 35803 accaaccccagccccagccccagcc 35779
>gb|AC025812.11|AC025812 Homo sapiens chromosome 3 clone RP11-182G24, complete sequence Length = 149006 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 532 ggtgcttggtggagtgaaaaa 552 ||||||||||||||||||||| Sbjct: 111668 ggtgcttggtggagtgaaaaa 111648
>gb|AC006064.10| Homo sapiens 12 PAC RP5-940J5 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 172571 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 accatccccagccccagccccagcc 92 |||| |||||||||||||||||||| Sbjct: 6057 accaaccccagccccagccccagcc 6081
>dbj|AP005832.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1136D08 Length = 176635 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 accatccccagccccagccccagcc 92 |||| |||||||||||||||||||| Sbjct: 140445 accaaccccagccccagccccagcc 140469
>dbj|AP004228.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1120_B07 Length = 118763 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 accatccccagccccagccccagcc 92 |||| |||||||||||||||||||| Sbjct: 25703 accaaccccagccccagccccagcc 25727
>dbj|AP006623.1| Homo sapiens genomic DNA, chromosome 11, clone:RP11-1391J07, complete sequence Length = 121103 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 tccccagccccagccccagcc 92 ||||||||||||||||||||| Sbjct: 7518 tccccagccccagccccagcc 7498
>dbj|AP006621.1| Homo sapiens genomic DNA, chromosome 11, clone:CMB9-55F22, complete sequence Length = 129989 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 tccccagccccagccccagcc 92 ||||||||||||||||||||| Sbjct: 121198 tccccagccccagccccagcc 121178
>gb|AC040169.7| Homo sapiens chromosome 16 clone RP11-505K9, complete sequence Length = 212596 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 accatccccagccccagccccagcc 92 |||| |||||||||||||||||||| Sbjct: 7697 accagccccagccccagccccagcc 7721
>gb|AC132936.9| Homo sapiens chromosome 11, clone RP13-569C6, complete sequence Length = 178778 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 tccccagccccagccccagcc 92 ||||||||||||||||||||| Sbjct: 112495 tccccagccccagccccagcc 112515
>gb|AC119253.7| Mus musculus chromosome 15, clone RP24-279A15, complete sequence Length = 163503 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 tccccagccccagccccagcc 92 ||||||||||||||||||||| Sbjct: 90305 tccccagccccagccccagcc 90325
>gb|AC004148.1|AC004148 Homo sapiens chromosome 17, clone HCIT524C5, complete sequence Length = 118276 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 tccccagccccagccccagcc 92 ||||||||||||||||||||| Sbjct: 22215 tccccagccccagccccagcc 22195
>gb|AY892681.1| Synthetic construct Homo sapiens clone FLH026836.01L hematopoietic cell-specific Lyn substrate 1 (HCLS1) mRNA, partial cds Length = 1461 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 ccccagccccagccccagccg 93 ||||||||||||||||||||| Sbjct: 1276 ccccagccccagccccagccg 1256
>gb|AY892680.1| Synthetic construct Homo sapiens clone FLH026835.01L hematopoietic cell-specific Lyn substrate 1 (HCLS1) mRNA, partial cds Length = 1461 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 ccccagccccagccccagccg 93 ||||||||||||||||||||| Sbjct: 1276 ccccagccccagccccagccg 1256
>gb|AY890192.1| Synthetic construct Homo sapiens clone FLH026840.01X hematopoietic cell-specific Lyn substrate 1 (HCLS1) mRNA, complete cds Length = 1461 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 ccccagccccagccccagccg 93 ||||||||||||||||||||| Sbjct: 1276 ccccagccccagccccagccg 1256
>gb|AY890191.1| Synthetic construct Homo sapiens clone FLH026839.01X hematopoietic cell-specific Lyn substrate 1 (HCLS1) mRNA, complete cds Length = 1461 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 ccccagccccagccccagccg 93 ||||||||||||||||||||| Sbjct: 1276 ccccagccccagccccagccg 1256
>gb|AC118614.12| Mus musculus chromosome 18, clone RP23-477B20, complete sequence Length = 159912 Score = 42.1 bits (21), Expect = 4.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 336 ttggaaagcatagccttattggagggagt 364 |||| ||| |||||||||||||||||||| Sbjct: 128809 ttgggaagtatagccttattggagggagt 128837
>gb|AC165322.12| Mus musculus chromosome 1, clone RP23-127J15, complete sequence Length = 185278 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 ccccagccccagccccagccgagcc 97 |||||||||||||||||||| |||| Sbjct: 143320 ccccagccccagccccagcccagcc 143296 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 ccccagccccagccccagccgagcc 97 |||||||||||||||||||| |||| Sbjct: 143434 ccccagccccagccccagcccagcc 143410 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 ccccagccccagccccagccgagcc 97 |||||||||||||||||||| |||| Sbjct: 143543 ccccagccccagccccagcccagcc 143519
>emb|AL928537.12| Mouse DNA sequence from clone RP23-236E7 on chromosome 2, complete sequence Length = 190808 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 ccccagccccagccccagccgagcc 97 |||||||||||||||||||| |||| Sbjct: 8827 ccccagccccagccccagcctagcc 8851
>gb|AC155931.2| Mus musculus BAC clone RP23-289D4 from 9, complete sequence Length = 189845 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 ccccagccccagccccagccgagcc 97 |||||||||||||||||||| |||| Sbjct: 4601 ccccagccccagccccagcccagcc 4625
>gb|BC069604.1| Homo sapiens atonal homolog 1 (Drosophila), mRNA (cDNA clone MGC:97163 IMAGE:7262406), complete cds Length = 1065 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 62 gagaccaccatccccagccccagcc 86 |||||||||||| |||||||||||| Sbjct: 50 gagaccaccatcgccagccccagcc 74
>gb|BC069594.1| Homo sapiens atonal homolog 1 (Drosophila), mRNA (cDNA clone MGC:97152 IMAGE:7262394), complete cds Length = 1065 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 62 gagaccaccatccccagccccagcc 86 |||||||||||| |||||||||||| Sbjct: 50 gagaccaccatcgccagccccagcc 74
>gb|AY107914.1| Zea mays PCO063920 mRNA sequence Length = 427 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 ccccagccccagccccagccg 93 ||||||||||||||||||||| Sbjct: 273 ccccagccccagccccagccg 293
>ref|NM_001012066.1| Rattus norvegicus sphingosine kinase 2 (Sphk2), mRNA gb|BC079120.1| Rattus norvegicus sphingosine kinase 2, mRNA (cDNA clone MGC:94123 IMAGE:7126682), complete cds Length = 2408 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 ccccagccccagccccagccg 93 ||||||||||||||||||||| Sbjct: 1202 ccccagccccagccccagccg 1222
>gb|AF152365.1|AF152365 Homo sapiens constitutive fragile region FRA3B sequence Length = 246546 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 532 ggtgcttggtggagtgaaaaa 552 ||||||||||||||||||||| Sbjct: 145755 ggtgcttggtggagtgaaaaa 145735
>emb|CT033785.8| Mouse DNA sequence from clone RP23-445G17 on chromosome 13, complete sequence Length = 181922 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 tccccagccccagccccagcc 92 ||||||||||||||||||||| Sbjct: 105219 tccccagccccagccccagcc 105199
>gb|BC062932.1| Mus musculus cDNA clone IMAGE:30355188, containing frame-shift errors Length = 3725 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 ccccagccccagccccagccg 93 ||||||||||||||||||||| Sbjct: 3328 ccccagccccagccccagccg 3308
>emb|BX276129.7| Mouse DNA sequence from clone RP23-213F21 on chromosome X, complete sequence Length = 77618 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 tccccagccccagccccagcc 92 ||||||||||||||||||||| Sbjct: 6652 tccccagccccagccccagcc 6632
>gb|AC139320.4| Mus musculus BAC clone RP24-410G8 from 9, complete sequence Length = 176888 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 ccccagccccagccccagccg 93 ||||||||||||||||||||| Sbjct: 168388 ccccagccccagccccagccg 168408
>emb|CT030730.7| Mouse DNA sequence from clone RP24-252L17 on chromosome 9, complete sequence Length = 151456 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 ccccagccccagccccagccgagcc 97 |||||||||||||||||||| |||| Sbjct: 97907 ccccagccccagccccagcccagcc 97931
>gb|AC004546.1|AC004546 Drosophila melanogaster DNA sequence (P1s DS02684 (D134) and DS00269 (D131)), complete sequence Length = 102389 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 74 cccagccccagccccagccga 94 ||||||||||||||||||||| Sbjct: 59654 cccagccccagccccagccga 59674
>gb|AC127288.4| Mus musculus BAC clone RP23-358J11 from 8, complete sequence Length = 210710 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 tccccagccccagccccagcc 92 ||||||||||||||||||||| Sbjct: 157178 tccccagccccagccccagcc 157158
>gb|AC140324.3| Mus musculus BAC clone RP23-402K14 from 6, complete sequence Length = 200190 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 ccccagccccagccccagccgagcc 97 |||||||||||||||||||| |||| Sbjct: 75465 ccccagccccagccccagcccagcc 75441
>emb|CT030196.9| Mouse DNA sequence from clone RP23-282B14 on chromosome 12, complete sequence Length = 215752 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 ccccagccccagccccagccgagcc 97 |||||||||||||||||||| |||| Sbjct: 205582 ccccagccccagccccagcccagcc 205558
>gb|U61148.1|HSU61148 Human atonal homolog 1 (Hath1) gene, complete cds Length = 1572 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 62 gagaccaccatccccagccccagcc 86 |||||||||||| |||||||||||| Sbjct: 412 gagaccaccatcgccagccccagcc 436
>emb|AL833776.9| Mouse DNA sequence from clone RP23-478M17 on chromosome X, complete sequence Length = 136414 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 ccccagccccagccccagccgagcc 97 |||||||||||||||||||| |||| Sbjct: 80604 ccccagccccagccccagcccagcc 80580 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 ccccagccccagccccagccgagcc 97 |||||||||||||||||||| |||| Sbjct: 80698 ccccagccccagccccagcccagcc 80674
>emb|AL731682.20| Mouse DNA sequence from clone RP23-123F7 on chromosome 2, complete sequence Length = 201290 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 ccccagccccagccccagccg 93 ||||||||||||||||||||| Sbjct: 136335 ccccagccccagccccagccg 136315
>emb|AL671492.12| Mouse DNA sequence from clone RP23-286H11 on chromosome X, complete sequence Length = 202638 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 tccccagccccagccccagcc 92 ||||||||||||||||||||| Sbjct: 52524 tccccagccccagccccagcc 52544
>emb|AL627093.17| Mouse DNA sequence from clone RP23-450P8 on chromosome 4, complete sequence Length = 169621 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 tccccagccccagccccagcc 92 ||||||||||||||||||||| Sbjct: 131428 tccccagccccagccccagcc 131448 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 tccccagccccagccccagcc 92 ||||||||||||||||||||| Sbjct: 132701 tccccagccccagccccagcc 132721
>emb|AL596258.15| Mouse DNA sequence from clone RP23-226P4 on chromosome 11, complete sequence Length = 219037 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 ccccagccccagccccagccg 93 ||||||||||||||||||||| Sbjct: 84842 ccccagccccagccccagccg 84862
>emb|AL772213.7| Mouse DNA sequence from clone RP23-104G16 on chromosome 2, complete sequence Length = 218975 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 tccccagccccagccccagcc 92 ||||||||||||||||||||| Sbjct: 40377 tccccagccccagccccagcc 40357
>emb|AL589652.13| Mouse DNA sequence from clone RP23-369L6 on chromosome X, complete sequence Length = 199294 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 ccccagccccagccccagccgagcc 97 |||||||||||||||||||| |||| Sbjct: 87442 ccccagccccagccccagcccagcc 87466
>emb|AJ421481.1| Bos taurus X-inactivation center region, Jpx and Xist genes Length = 233345 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 ccccagccccagccccagccgagcc 97 |||||||||||||||||||| |||| Sbjct: 118919 ccccagccccagccccagcccagcc 118943 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 ccccagccccagccccagccgagcc 97 |||||||||||||||||||| |||| Sbjct: 119019 ccccagccccagccccagcccagcc 119043
>emb|AL359087.17| Human DNA sequence from clone RP5-900A3, complete sequence Length = 109860 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 68 accatccccagccccagccccagcc 92 |||| |||||||||||||||||||| Sbjct: 20560 accagccccagccccagccccagcc 20536
>gb|AC158595.25| Mus musculus 10 BAC RP24-216B14 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 231740 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 ccatccccagccccagcccca 89 ||||||||||||||||||||| Sbjct: 65150 ccatccccagccccagcccca 65130
>gb|AC117665.6| Mus musculus chromosome 8, clone RP23-360I9, complete sequence Length = 217058 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 tccccagccccagccccagcc 92 ||||||||||||||||||||| Sbjct: 85870 tccccagccccagccccagcc 85890
>dbj|AP000353.2| Homo sapiens genomic DNA, chromosome 22q11.2, IGLL region, clone:KB318B8 Length = 123828 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 ccccagccccagccccagccgagcc 97 |||||||||||||||||||| |||| Sbjct: 43586 ccccagccccagccccagcccagcc 43562
>gb|AF489555.1| Mus musculus chromosome 11 genomic sequence Length = 20539 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 ccccagccccagccccagccg 93 ||||||||||||||||||||| Sbjct: 10387 ccccagccccagccccagccg 10367
>emb|AL645484.14| Mouse DNA sequence from clone RP23-38A10 on chromosome 11, complete sequence Length = 161787 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 tccccagccccagccccagcc 92 ||||||||||||||||||||| Sbjct: 155101 tccccagccccagccccagcc 155121 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 168,471,425 Number of extensions: 8896079 Number of successful extensions: 199215 Number of sequences better than 10.0: 236 Number of HSP's gapped: 199023 Number of HSP's successfully gapped: 274 Length of query: 1048 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1025 Effective length of database: 18,503,978,556 Effective search space: 18966578019900 Effective search space used: 18966578019900 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
