ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf30m14 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os02g54490:12002.t05028:unspliced-genomic anaphase promoting complex subunit 4, putative, expressed| Length = 6725 Score = 173 bits (372), Expect(5) = 2e-92 Identities = 70/85 (82%), Positives = 78/85 (91%) Frame = +1 / +2 Query: 976 GLLSYEDHTTRFFPPAPVMPRIGGLNSGDTGLADDNEEAIQEFSSASCQCFNILGTGDKD 1155 GLLSYED T RFFPPAPV+PRIGGL+SGDTGL+D+NEE+IQEFSSASCQ FNIL +GDK Sbjct: 1193 GLLSYEDRTARFFPPAPVIPRIGGLSSGDTGLSDENEESIQEFSSASCQRFNILCSGDKG 1372 Query: 1156 GCICLSIFGIFPVGKIVSKYNN*ML 1230 GCIC SIFGIFPVGKIVS+YN *+L Sbjct: 1373 GCICFSIFGIFPVGKIVSRYNT*VL 1447 Score = 91.8 bits (194), Expect(5) = 2e-92 Identities = 34/36 (94%), Positives = 36/36 (100%) Frame = +2 / +1 Query: 89 LAEWNPEKDLLAMVTDDSKVLLHRFNWQRLWTISPG 196 +AEWNPEKDLLAMVTDDSKV+LHRFNWQRLWTISPG Sbjct: 1 MAEWNPEKDLLAMVTDDSKVVLHRFNWQRLWTISPG 108 Score = 79.9 bits (168), Expect(5) = 2e-92 Identities = 31/35 (88%), Positives = 33/35 (94%) Frame = +2 / +2 Query: 194 GKCITSICWSLDGKIVALGTKDGFVLLHDVEVCML 298 GKCITSICWS DGKIVALGT+DG VLLHDVEVC+L Sbjct: 314 GKCITSICWSPDGKIVALGTEDGLVLLHDVEVCIL 418 Score = 73.9 bits (155), Expect(5) = 2e-92 Identities = 34/61 (55%), Positives = 40/61 (65%) Frame = +2 / +2 Query: 809 LACYYSLLLTYIYFTTSCMYKYHEC*SQNGKMLRSIKSHDVAIVCLNWAEDEPLSRACYL 988 + C S+ L ++ TS C* QNGKMLR IKSHDVAIVCLNWAEDE LSR + Sbjct: 770 ILCCDSVHLLLLFHFTSLCMFK*RC*LQNGKMLRRIKSHDVAIVCLNWAEDELLSRVYHC 949 Query: 989 M 991 + Sbjct: 950 L 952 Score = 26.3 bits (51), Expect(5) = 2e-92 Identities = 12/19 (63%), Positives = 13/19 (68%) Frame = +2 / +3 Query: 566 TRHIDTSHFELLYFLLSTI 622 TR HF+LL FLLSTI Sbjct: 639 TRTRHKEHFQLLPFLLSTI 695 Score = 145 bits (311), Expect(5) = 2e-73 Identities = 65/81 (80%), Positives = 70/81 (86%) Frame = -3 / -3 Query: 1205 TIFPTGNIPKILRQMQPSLSPVPRILKH*HEALENS*MASSLSSARPVSPELSPPILGIT 1026 TIFPTGNIPKIL+QMQP LSP+ RILK EALENS*M SS SS RPVSPELSPPILGIT Sbjct: 1422 TIFPTGNIPKILKQMQPPLSPLHRILKRWQEALENS*MDSSFSSERPVSPELSPPILGIT 1243 Query: 1025 GAGGKKRVVWSS*DNKPLIAV 963 GAGGKKR V SS*DN+P ++V Sbjct: 1242 GAGGKKRAVRSS*DNRPSLSV 1180 Score = 74.4 bits (156), Expect(5) = 2e-73 Identities = 31/35 (88%), Positives = 32/35 (91%) Frame = -2 / -3 Query: 297 SIQTSTSCKRTKPSFVPSATILPSRLQQIDVMHFP 193 +I TSTSCKRTKPS VPSATILPS LQQIDVMHFP Sbjct: 417 NIHTSTSCKRTKPSSVPSATILPSGLQQIDVMHFP 313 Score = 69.8 bits (146), Expect(5) = 2e-73 Identities = 30/35 (85%), Positives = 31/35 (88%) Frame = -2 / -1 Query: 195 PGDIVHSRCQLKRCRRTLESSVTIASRSFSGFHSA 91 PG+IVHS CQL R R TLESSVTIASRSFSGFHSA Sbjct: 107 PGEIVHSLCQLNR*RTTLESSVTIASRSFSGFHSA 3 Score = 62.9 bits (131), Expect(5) = 2e-73 Identities = 24/33 (72%), Positives = 28/33 (84%) Frame = -3 / -1 Query: 977 PLIAVHLLPNSDIQWQHHEILYFVTSSHSAIST 879 PLI HLLP+S+IQWQHH IL+F+ SHSAIST Sbjct: 938 PLIEAHLLPSSNIQWQHHGILFFLAFSHSAIST 840 Score = 28.6 bits (56), Expect(5) = 2e-73 Identities = 9/15 (60%), Positives = 11/15 (73%) Frame = -3 / -3 Query: 623 KWCSTENKAIQNVMC 579 KWCST + I NV+C Sbjct: 696 KWCSTGKEVIGNVLC 652 Score = 138 bits (295), Expect(5) = 2e-66 Identities = 57/83 (68%), Positives = 64/83 (77%) Frame = -1 / -1 Query: 1228 AFSYCIYLLSFQLEIFQKY*GKCNHLYHQCPEY*NIDTKHLKIPEWLLHYHPRDQYLPN* 1049 A CIYLLSFQL IFQ+Y* KCNHLYH C EY*N K LKIPEW+LH H +DQ L N Sbjct: 1445 ALRCCIYLLSFQLGIFQRY*SKCNHLYHHCTEY*NAGRKRLKIPEWILHSHLKDQCLQNS 1266 Query: 1048 AHLS*ASREQEERNV*CGLHKIT 980 AH S* S+E+EER+V CGLH+IT Sbjct: 1265 AHRS*ESQEREERSVQCGLHRIT 1197 Score = 69.3 bits (145), Expect(5) = 2e-66 Identities = 27/33 (81%), Positives = 29/33 (87%) Frame = -3 / -1 Query: 293 YRPQHHAKEQNHLLYQVLLFYHQGSSKLM*CTS 195 Y PQHHAKE NHL YQVLLFYH+GS+K M*CTS Sbjct: 413 YTPQHHAKEPNHLRYQVLLFYHRGSNK*M*CTS 315 Score = 62.9 bits (131), Expect(5) = 2e-66 Identities = 25/33 (75%), Positives = 29/33 (87%) Frame = -1 / -3 Query: 190 GYSPQPLPIEAMQENLGVISNHSKQILLWVPLC 92 G SP PLPIE+M++NL VISNHSK ILLW+PLC Sbjct: 102 GDSP*PLPIESMKDNLRVISNHSK*ILLWIPLC 4 Score = 61.1 bits (127), Expect(5) = 2e-66 Identities = 24/32 (75%), Positives = 28/32 (87%) Frame = -1 / -2 Query: 976 P**RFIFCPIQTYNGNIMRFYTS*HLPILRLA 881 P**+ IFCP+QTYNGNIM FY+S*H PIL+ A Sbjct: 937 P**KLIFCPVQTYNGNIMGFYSS*HFPILQSA 842 Score = 25.8 bits (50), Expect(5) = 2e-66 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = -2 / -2 Query: 624 EMVLNRK*SNSKCDVSMCLV 565 +MVLNRK SN KC + + V Sbjct: 697 KMVLNRKGSNWKCSLCLVRV 638 Score = 130 bits (278), Expect(4) = 7e-66 Identities = 60/83 (72%), Positives = 65/83 (78%) Frame = +3 / +1 Query: 981 VIL*RPHYTFLSSCSRDA*DRWAQFGRYWSRG***RSHSGIFKCFVSMF*YSGHW**RWL 1160 VIL*RPH T LSS S D+*DRWA+F R+WS * *R HSGIFK F+ F*YS W**RWL Sbjct: 1198 VIL*RPHCTLLSSRSCDS*DRWAEFWRHWSFR*E*RIHSGIFKRFLPAF*YSVQW**RWL 1377 Query: 1161 HLPQYFWNISSWKDSK*IQ*LNA 1229 HL QY WNI SWKDSK*IQ L+A Sbjct: 1378 HLLQYLWNIPSWKDSK*IQHLSA 1446 Score = 74.8 bits (157), Expect(4) = 7e-66 Identities = 29/34 (85%), Positives = 31/34 (91%) Frame = +1 / +1 Query: 193 REVHHINLLEP*W*NSSTWYKRWFCSFA*C*GLY 294 REVHHI LLEP W*NSSTWY+RWF SFA*C*G+Y Sbjct: 313 REVHHIYLLEPRW*NSSTWYRRWFGSFA*C*GVY 414 Score = 63.8 bits (133), Expect(4) = 7e-66 Identities = 26/35 (74%), Positives = 30/35 (85%) Frame = +1 / +3 Query: 91 GRVEPREGSACYGY**LQGSPASLQLATAVDYIPR 195 GRVE REGS CYGY**L G P+S+QLA A+DY+PR Sbjct: 3 GRVESREGSTCYGY**L*GCPSSIQLAKAMDYLPR 107 Score = 62.9 bits (131), Expect(4) = 7e-66 Identities = 25/34 (73%), Positives = 28/34 (82%) Frame = +1 / +1 Query: 880 VLIAEWEDVTKYKIS*CCHCMSELGRR*TAIKGL 981 VLIAEWE+ K KI *CCHCM ELGRR* +IKG+ Sbjct: 841 VLIAEWENAKKNKIP*CCHCMFELGRR*ASIKGI 942 Score = 119 bits (254), Expect(4) = 7e-53 Identities = 59/90 (65%), Positives = 66/90 (73%) Frame = +2 / +3 Query: 965 PLSRACYLMKTTLHVSFLLLP*CLG*VGSIREILVSRMIMKKPFRNFQVLRVNVLIFWAL 1144 P ACY MKT LH SFL L * LG VG + E LV +M MK PFRNFQ L +VLIF A+ Sbjct: 1182 PTRMACYPMKTALHASFLPLL*FLGSVG*VLETLVFQMRMKNPFRNFQALPASVLIFCAV 1361 Query: 1145 VIKMVAFASVFLEYFQLER**VNTITECST 1234 VIK+VAFASV LEY QLER**V+T ECS+ Sbjct: 1362 VIKVVAFASVSLEYSQLER**VDTTPECSS 1451 Score = 59.3 bits (123), Expect(4) = 7e-53 Identities = 27/33 (81%), Positives = 27/33 (81%) Frame = +3 / +3 Query: 195 GSASHQFAGALMVK**HLVQKMVLFFCMMLRSV 293 GSASH F GA MVK**HLV KMV FFCMMLR V Sbjct: 315 GSASHLFVGAPMVK**HLVPKMVWFFCMMLRCV 413 Score = 57.0 bits (118), Expect(4) = 7e-53 Identities = 25/34 (73%), Positives = 25/34 (73%) Frame = +3 / +2 Query: 90 WQSGTQRRICLLWLLMTPRFSCIASIGNGCGLYP 191 WQSG QRRI LLWLLMT R S I SIG G GL P Sbjct: 2 WQSGIQRRIYLLWLLMTLRLSFIDSIGKGYGLSP 103 Score = 52.4 bits (108), Expect(4) = 7e-53 Identities = 24/35 (68%), Positives = 27/35 (77%) Frame = +3 / +3 Query: 882 ANRRMGRCYEV*NLMMLPLYV*IGQKMNRYQGLVI 986 A+ RMG+C E *N MMLPLYV* GQKM+ YQG I Sbjct: 843 ADCRMGKC*EE*NPMMLPLYV*TGQKMSFYQGYTI 947 Score = 89.0 bits (188), Expect(5) = 4e-52 Identities = 37/47 (78%), Positives = 41/47 (87%) Frame = -2 / -2 Query: 1230 EHSVIVFTYYLSNWKYSKNTEANATIFITSAQNIKTLTRST*KFLNG 1090 EHS +V TYYLSNW+YSK+TEANAT FIT+AQNIKTL S *KFLNG Sbjct: 1447 EHSGVVSTYYLSNWEYSKDTEANATTFITTAQNIKTLAGSA*KFLNG 1307 Score = 68.4 bits (143), Expect(5) = 4e-52 Identities = 27/34 (79%), Positives = 29/34 (85%) Frame = -1 / -2 Query: 295 HTDLNIMQKNKTIFCTKCYYFTIKAPAN*CDALP 194 +T LNIMQKN+TIF TKCYYFTI AP N CDALP Sbjct: 415 YTHLNIMQKNQTIFGTKCYYFTIGAPTNRCDALP 314 Score = 58.3 bits (121), Expect(5) = 4e-52 Identities = 24/32 (75%), Positives = 27/32 (84%) Frame = -2 / -3 Query: 975 LDSGSSSAQFRHTMATS*DFILRNIFPFCD*H 880 LD SSSAQF+HTMATS DFIL +IFPFC+ H Sbjct: 936 LDRSSSSAQFKHTMATSWDFILLSIFPFCNQH 841 Score = 51.5 bits (106), Expect(5) = 4e-52 Identities = 25/34 (73%), Positives = 26/34 (76%) Frame = -3 / -2 Query: 191 GI*STAVAN*SDAGEPWSHQ*P*QADPSLGSTLP 90 G *S A AN* D G+P SHQ*P*Q DPSL STLP Sbjct: 103 GR*SIAFAN*IDEGQP*SHQ*P*QVDPSLDSTLP 2 Score = 40.9 bits (83), Expect(5) = 4e-52 Identities = 19/31 (61%), Positives = 21/31 (67%) Frame = -2 / -2 Query: 1047 PTYPRHHGSRRKETCSVVFIR*QALDSGSSS 955 PT PR+H S RKE CS VFI *QA+ G S Sbjct: 1264 PTDPRNHRSGRKEACSAVFIG*QAILVGLRS 1172
>LOC_Os02g54480:12002.t05027:unspliced-genomic conserved hypothetical protein| Length = 1978 Score = 43.7 bits (89), Expect = 0.009 Identities = 16/25 (64%), Positives = 19/25 (76%) Frame = +2 / -2 Query: 11 EQMKEAAASGMPFQLQFDKPIPFQI 85 E+ A A+ PFQLQFDKPIPFQ+ Sbjct: 1857 EEASTAGAAATPFQLQFDKPIPFQV 1783 Score = 38.6 bits (78), Expect = 0.29 Identities = 14/19 (73%), Positives = 15/19 (78%) Frame = -2 / +2 Query: 81 WKGMGLSNCSWNGMPEAAA 25 WKGMGLSN SWNG+ A A Sbjct: 1787 WKGMGLSNWSWNGVAAAPA 1843 Score = 35.0 bits (70), Expect = 3.7 Identities = 13/14 (92%), Positives = 13/14 (92%) Frame = +1 / -1 Query: 40 HAVPAAVRQAHPLP 81 HAVPA VRQAHPLP Sbjct: 1828 HAVPAPVRQAHPLP 1787
>LOC_Os09g26390:12009.t02318:unspliced-genomic DNA binding protein, putative, expressed| Length = 6803 Score = 29.0 bits (57), Expect(2) = 0.097 Identities = 8/15 (53%), Positives = 11/15 (73%) Frame = +3 / +1 Query: 567 PDTLTHHILNCFIFC 611 P L +H+ NCF+FC Sbjct: 3808 PSYLKYHLTNCFLFC 3852 Score = 28.6 bits (56), Expect(2) = 0.097 Identities = 17/53 (32%), Positives = 24/53 (45%) Frame = +2 / +1 Query: 713 PYMISMIVT*VHNLFFVLTLVQFVILYYSSNNLACYYSLLLTYIYFTTSCMYK 871 PY + + +L VL + F+ L L Y L T+IY + S MYK Sbjct: 3922 PYHVEWLQCVATSLRAVLLMCHFLFLVAHKLVLMTRYEFLRTWIYNS*SYMYK 4080
>LOC_Os11g43890:12011.t03919:unspliced-genomic expressed protein| Length = 2692 Score = 39.6 bits (80), Expect = 0.16 Identities = 13/29 (44%), Positives = 21/29 (72%) Frame = +2 / +2 Query: 194 GKCITSICWSLDGKIVALGTKDGFVLLHD 280 GK + S+ WS DGK++A G+ DG + ++D Sbjct: 1976 GKFVLSVAWSPDGKLLACGSMDGTIAVYD 2062
>LOC_Os12g18010:12012.t01652:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 10182 Score = 30.4 bits (60), Expect(2) = 0.31 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = +2 / -2 Query: 794 YSSNNLACYYSLLLTYIYFTTS 859 Y SNNL C ++ + YIY TS Sbjct: 542 YKSNNLNCITNITIIYIYIITS 477 Score = 25.4 bits (49), Expect(2) = 0.31 Identities = 9/23 (39%), Positives = 14/23 (60%) Frame = +2 / -3 Query: 749 NLFFVLTLVQFVILYYSSNNLAC 817 N + + + +ILY +SNNL C Sbjct: 694 NNYILSLITNIIILY*NSNNLIC 626
>LOC_Os01g42750:12001.t03792:unspliced-genomic hypothetical protein| Length = 1908 Score = 38.2 bits (77), Expect = 0.40 Identities = 15/37 (40%), Positives = 22/37 (59%) Frame = -2 / +2 Query: 1866 NSWLHMHHLRQQYLVSNYLFNQSTNLGTWFQSEAALG 1756 NSW H+L+ Q L+ +YLFN ++ T F + LG Sbjct: 995 NSWNEFHYLKMQPLILSYLFNNKWHIMTCFHTLLDLG 1105
>LOC_Os01g05620:12001.t00446:unspliced-genomic NBS-LRR disease resistance protein, putative| Length = 4346 Score = 30.9 bits (61), Expect(2) = 0.44 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = +2 / +1 Query: 1988 LYVGVYACLPMTRGITSTLCTTLLVAILHRLWIQ 2089 +Y GV C P + + C +LLV RLW++ Sbjct: 133 VYTGVIRCDPDPGSVRPSPCLSLLVGRCRRLWLR 234 Score = 24.4 bits (47), Expect(2) = 0.44 Identities = 7/18 (38%), Positives = 12/18 (66%) Frame = +2 / +3 Query: 1916 MDHQITYQH*RLVLFCIY 1969 M+ + Y+H R + FC+Y Sbjct: 87 MNQLVRYKHNRRICFCLY 140
>LOC_Os05g29990:12005.t02598:unspliced-genomic UDP-glucuronic acid decarboxylase 1, putative, expressed| Length = 4467 Score = 33.1 bits (66), Expect(2) = 0.48 Identities = 9/13 (69%), Positives = 12/13 (92%) Frame = +2 / +1 Query: 3320 FVWSCLLFRVPWL 3358 F+WSCLL ++PWL Sbjct: 3844 FLWSCLLLKIPWL 3882 Score = 29.5 bits (58), Expect(2) = 0.48 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = +1 / +2 Query: 2449 RTSWRTGRWCRRPSGRSISFDRKNNY 2526 RT WR RW RR +G S S R +++ Sbjct: 416 RTRWRGSRWSRR*AGGSSSCRRGSSW 493
>LOC_Os11g10690:12011.t00958:unspliced-genomic stem rust resistance protein, putative, expressed| Length = 4755 Score = 33.6 bits (67), Expect(2) = 0.68 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = -2 / +2 Query: 1251 IIFIVNVEHSVIVFTYYLSNWKYSKNTEANATIFITSAQNIKTLT 1117 I+F +N S I+ L NWK T N ++ Q +KT T Sbjct: 2612 ILFRLNSTSSFILIAQVLGNWKTRLETGRNGSLLEAYCQQVKTCT 2746 Score = 28.6 bits (56), Expect(2) = 0.68 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = -3 / +3 Query: 575 CVWF*HKLTISLYYFCGRSRCL 510 C+ *H T S YYF SRC+ Sbjct: 3651 CILL*HLKTHSFYYFVNFSRCV 3716
>LOC_Os01g37090:12001.t03257:unspliced-genomic expressed protein| Length = 2203 Score = 36.3 bits (73), Expect = 1.4 Identities = 13/29 (44%), Positives = 20/29 (68%) Frame = -3 / -3 Query: 614 STENKAIQNVMCQCVWF*HKLTISLYYFC 528 +T+ K NV+CQC++F* T++ Y FC Sbjct: 914 TTQPKGF*NVICQCLFF*SSSTLNSYAFC 828
>LOC_Os03g63020:12003.t05523:unspliced-genomic serine/threonine-protein kinase MHK, putative, expressed| Length = 5053 Score = 28.6 bits (56), Expect(2) = 1.9 Identities = 9/21 (42%), Positives = 14/21 (66%) Frame = -2 / -3 Query: 2235 HLLSAFWIMLTKIYKKRNQYK 2173 HL W ++ KIYK++ +YK Sbjct: 4151 HLFCMLWNIVRKIYKQKRKYK 4089 Score = 24.4 bits (47), Expect(2) = 1.9 Identities = 9/14 (64%), Positives = 9/14 (64%) Frame = -1 / -3 Query: 2278 CTGGSP*PGYRRFS 2237 CTGG PGY R S Sbjct: 4277 CTGGFSNPGYSRIS 4236 Score = 29.0 bits (57), Expect(2) = 6.2 Identities = 10/15 (66%), Positives = 13/15 (86%) Frame = +3 / +1 Query: 2235 EENLLYPGYGDPPVQ 2279 +E LLYPG+ +PPVQ Sbjct: 4234 QEILLYPGFENPPVQ 4278 Score = 22.1 bits (42), Expect(2) = 6.2 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = +2 / +1 Query: 2174 LYWFLFL*ILVSMIQNADKR* 2236 LY+ L*I ++M Q+ KR* Sbjct: 4090 LYFLFCL*IFLTMFQSIQKR* 4152
>LOC_Os06g30420:12006.t02745:unspliced-genomic EMB1025, putative, expressed| Length = 1929 Score = 35.9 bits (72), Expect = 2.0 Identities = 13/42 (30%), Positives = 17/42 (40%) Frame = +1 / -1 Query: 2278 NHVYVHSCHHCITPWGKPQPRHPGKRSTCLTAKPTHCQLLEE 2403 +H +H C PW P P HP C P H Q + + Sbjct: 975 SHQSIHHCPVRHHPWHHPLPLHPSHHPHCRPGPPAHQQTMHQ 850
>LOC_Os04g46710:12004.t04200:unspliced-genomic pollen thioesterase, putative| Length = 1777 Score = 35.4 bits (71), Expect = 2.7 Identities = 13/26 (50%), Positives = 18/26 (69%) Frame = +3 / -3 Query: 462 GGTCSQGSLRQLWAYIKASRSSTKIV 539 GG C +G R LW ++A RSS+KI+ Sbjct: 1721 GGICCRGKRRLLWHPLRAGRSSSKII 1644
>LOC_Os03g26020:12003.t02296:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3610 Score = 28.6 bits (56), Expect(3) = 3.4 Identities = 9/15 (60%), Positives = 11/15 (73%) Frame = +2 / +3 Query: 3317 CFVWSCLLFRVPWLR 3361 C+V SC LF +PW R Sbjct: 2037 CWVCSCALFPLPWFR 2081 Score = 27.2 bits (53), Expect(3) = 3.4 Identities = 13/37 (35%), Positives = 19/37 (51%) Frame = +3 / +2 Query: 2871 LVCPFKF*LCYFPSLCSLFVLEYFICELTILLNIYSI 2981 L+CPF LC S +L +F+C ++L Y I Sbjct: 440 LLCPFLPRLCLLLLCSSPLLL*FFLCYDLVVLQWYQI 550 Score = 24.9 bits (48), Expect(3) = 3.4 Identities = 13/40 (32%), Positives = 17/40 (42%) Frame = +2 / +1 Query: 2462 EQVAGAAAHPAGQFLLTERIIMISRRLTVAIDHYHPACVC 2581 E VA AAA AG R+ + R+T + C C Sbjct: 199 EGVAAAAAAVAGCHACATRVTSYNARMTFTVTCRVGVCAC 318
>LOC_Os02g30700:12002.t02763:unspliced-genomic myb-like DNA-binding domain containing protein| Length = 2447 Score = 28.1 bits (55), Expect(2) = 3.7 Identities = 9/14 (64%), Positives = 10/14 (71%) Frame = +1 / +2 Query: 2452 TSWRTGRWCRRPSG 2493 +SWR RW RRP G Sbjct: 242 SSWRRRRWTRRPRG 283 Score = 24.0 bits (46), Expect(2) = 3.7 Identities = 8/35 (22%), Positives = 20/35 (57%) Frame = +2 / +1 Query: 2369 QPSQHIASCWRRRITGFFSIRVFPSAVEPHGEQVA 2473 +P+ ++S W RR + ++ ++PH +++A Sbjct: 67 EPAAPLSSVWTRRDEKLLEMLLWRWQLDPHWDRLA 171
>LOC_Os12g02120:12012.t00109:unspliced-genomic dual-specificity protein-like phosphatase 3, putative, expressed| Length = 6939 Score = 35.0 bits (70), Expect = 3.7 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = -1 / +3 Query: 3658 HIHVFQTWQAWDPPVLF 3608 HIH+ QTW W PP +F Sbjct: 3327 HIHILQTWPPWPPPRVF 3377
>LOC_Os10g17610:12010.t01318:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 5955 Score = 35.0 bits (70), Expect = 3.7 Identities = 15/33 (45%), Positives = 19/33 (57%) Frame = +2 / -2 Query: 1964 IYVRCIMPLYVGVYACLPMTRGITSTLCTTLLV 2062 IY+ I+P G AC + G STLCT LL+ Sbjct: 2789 IYILIILP*GAGFGACFARSCGSASTLCTALLI 2691
>LOC_Os05g32030:12005.t02799:unspliced-genomic conserved hypothetical protein| Length = 4221 Score = 30.4 bits (60), Expect(2) = 4.8 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = +2 / +1 Query: 3083 IMMS*ACCRHRYEVRFFFYQMIKV*S*FPNII 3178 I+M C+HR +V FF+ +I V S F N I Sbjct: 3769 ILMKFHICKHRQQVWIFFFCVIVVSSSFDNFI 3864 Score = 28.6 bits (56), Expect(2) = 4.8 Identities = 12/36 (33%), Positives = 21/36 (58%) Frame = +3 / +1 Query: 2886 KF*LCYFPSLCSLFVLEYFICELTILLNIYSIF*MV 2993 KF +C S+C+++ ++ IC + NIY I M+ Sbjct: 226 KFVIC*SISMCNIYFNKFVIC*SISMFNIYLIMVML 333
>LOC_Os01g35950:12001.t03145:unspliced-genomic hypothetical protein| Length = 1108 Score = 34.5 bits (69), Expect = 5.1 Identities = 16/43 (37%), Positives = 23/43 (53%) Frame = +3 / -3 Query: 2217 RTQTRDEENLLYPGYGDPPVQPRLCPLMSSLHHPLGEAPATPS 2345 R++ D+ N P + P+Q L PL+ +H L A ATPS Sbjct: 962 RSKISDDSNPTAPHHSPDPIQIGLPPLLPQQNHALHLAAATPS 834
>LOC_Os12g07920:12012.t00674:unspliced-genomic hypothetical protein| Length = 1205 Score = 34.5 bits (69), Expect = 5.1 Identities = 20/57 (35%), Positives = 29/57 (50%) Frame = +2 / -2 Query: 677 FYHCVLLVTVKTPYMISMIVT*VHNLFFVLTLVQFVILYYSSNNLACYYSLLLTYIY 847 F H V+ VTV +IS T H F+ LTL + +I L Y +LL+ ++Y Sbjct: 598 FIHRVIFVTVCIWGLISFFDTTCHTCFWSLTLQEKIIKIL*LPCLHLYLNLLIVFLY 428
>LOC_Os03g25140:12003.t02206:unspliced-genomic peptidyl-prolyl isomerase PASTICCINO1, putative, expressed| Length = 11408 Score = 34.5 bits (69), Expect = 5.1 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = +2 / -1 Query: 2114 KTKNKNLFNVLELMFSLTYVLYWFLF 2191 + KN + F +L MF+LTY +Y+F F Sbjct: 5525 RKKNTSFFTLLRYMFALTYTIYFFNF 5448
>LOC_Os03g19630:12003.t01728:unspliced-genomic tuber-specific and sucrose-responsive element binding factor,| putative Length = 570 Score = 29.0 bits (57), Expect(2) = 5.5 Identities = 13/40 (32%), Positives = 21/40 (52%) Frame = -3 / -2 Query: 1997 LHTTA*CSGHRYRRGLAVSVGT*FGDPLPTVLQLTNSLSG 1878 LH + C+G R RRG+ ++ + +P + T S SG Sbjct: 224 LHLSRHCAGERRRRGICAAMRRQWREPFSMARRRTASSSG 105 Score = 22.6 bits (43), Expect(2) = 5.5 Identities = 8/24 (33%), Positives = 13/24 (54%) Frame = -2 / -2 Query: 2103 CYHRF*IHNRCKIATSKVVHKVEV 2032 C+HR+ +RC+ + V EV Sbjct: 332 CFHRWPASSRCRQRRASSVSSAEV 261
>LOC_Os05g38350:12005.t03377:unspliced-genomic glycerol-3-phosphate acyltransferase 8, putative, expressed| Length = 2808 Score = 30.4 bits (60), Expect(2) = 6.1 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = +3 / +2 Query: 2895 LCYFPSLCSLFVLEYFICELTILLNIY 2975 L + +CS F+ YF C TILL IY Sbjct: 2681 LAFSYEICS*FI*FYFCCNQTILLYIY 2761 Score = 27.6 bits (54), Expect(2) = 6.1 Identities = 11/17 (64%), Positives = 11/17 (64%) Frame = +1 / +2 Query: 2446 SRTSWRTGRWCRRPSGR 2496 SR WR GR C R SGR Sbjct: 140 SRRCWRCGRCCGRWSGR 190
>LOC_Os11g24340:12011.t02055:unspliced-genomic serine carboxypeptidase family protein| Length = 4668 Score = 27.2 bits (53), Expect(2) = 6.2 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = +2 / +1 Query: 2150 LMFSLTYVLYWFLFL*ILVSMIQNADKR*GK 2242 +MF LT Y L +*+L S+ Q D+R G+ Sbjct: 166 IMFYLTMTRYVLLLM*VLSSIDQICDRRRGE 258 Score = 24.0 bits (46), Expect(2) = 6.2 Identities = 14/43 (32%), Positives = 20/43 (46%) Frame = +2 / +3 Query: 2264 GSSCTTTSMSTHVIIASPLGGSPSHAILAKGVHA*QPSQHIAS 2392 G SC+TTS S A+ S S A A A S+ +++ Sbjct: 261 GQSCSTTSSSLRATPAATPSSSGSPAATAAPCSAPSSSRSVSN 389
>LOC_Os12g04790:12012.t00366:unspliced-genomic expressed protein| Length = 2574 Score = 26.3 bits (51), Expect(2) = 6.5 Identities = 11/33 (33%), Positives = 17/33 (51%) Frame = -3 / +1 Query: 2012 SKHILLHTTA*CSGHRYRRGLAVSVGT*FGDPL 1914 +K ++L +GH + AVSV FG P+ Sbjct: 2071 NKMLILFVLRTLNGHEFSHNCAVSVSAEFGTPV 2169 Score = 24.9 bits (48), Expect(2) = 6.5 Identities = 10/37 (27%), Positives = 17/37 (45%) Frame = -3 / +1 Query: 1910 TVLQLTNSLSGHFIATLGCTCIICGNSTWCQTIYSIS 1800 T+ + N+L +G C++ N CQ + IS Sbjct: 2254 TIRDIQNTLRNRV*LLMGMKCLVSYNHCLCQKHFRIS 2364
>LOC_Os02g20440:12002.t01836:unspliced-genomic conserved hypothetical protein| Length = 2781 Score = 28.1 bits (55), Expect(3) = 6.8 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = +1 / +2 Query: 754 IFCFDSCAICDFVLLFKQSCMLL 822 I+ DS IC+FVLL + C LL Sbjct: 2033 IYIHDSS*ICNFVLLISRLCGLL 2101 Score = 25.8 bits (50), Expect(3) = 6.8 Identities = 7/14 (50%), Positives = 11/14 (78%) Frame = +3 / +2 Query: 606 FC*APFLICNLFQF 647 +C PFL CN+++F Sbjct: 1043 YCFLPFLFCNIWEF 1084 Score = 24.9 bits (48), Expect(3) = 6.8 Identities = 7/15 (46%), Positives = 12/15 (80%) Frame = +2 / +1 Query: 1940 H*RLVLFCIYVRCIM 1984 H +LV FC+Y+ C++ Sbjct: 2449 HLQLVSFCLYLTCLL 2493
>LOC_Os12g42000:12012.t03876:unspliced-genomic hypothetical protein| Length = 659 Score = 34.1 bits (68), Expect = 7.0 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = +1 / +2 Query: 2272 LYNHVYVHSCHHCITPWGKPQPRHPGK 2352 LY HV V+S H C+ P + + HPG+ Sbjct: 407 LYVHVRVYSMHACMPPCHRAEAGHPGR 487
>LOC_Os11g43850:12011.t03915:unspliced-genomic pectinesterase, putative| Length = 2093 Score = 29.5 bits (58), Expect(2) = 8.5 Identities = 10/29 (34%), Positives = 19/29 (65%) Frame = +3 / +3 Query: 792 ITLQTILHAITVYFLLIFTLPLRVCINIM 878 + L ILH I Y++ +F++ R CI+++ Sbjct: 1662 LVLIIILHLICTYYVTLFSVATRQCIHLV 1748 Score = 27.6 bits (54), Expect(2) = 8.5 Identities = 9/35 (25%), Positives = 22/35 (62%) Frame = +1 / +1 Query: 2881 HLSFSFVIFLLYAASLYWSISYVS*LSC*IFILYF 2985 H +++FV+ L+ +L + +V+ +S ++ +YF Sbjct: 1978 HFNYNFVVIYLFYLTLIF*CKFVNFMSYYVYFMYF 2082
>LOC_Os06g50146:12006.t04889:unspliced-genomic calcium-dependent protein kinase CPK1 adapter protein 2, putative,| expressed Length = 3362 Score = 27.6 bits (54), Expect(3) = 9.2 Identities = 10/28 (35%), Positives = 16/28 (57%) Frame = -3 / -3 Query: 341 KRPATKRKASRPLLSAYRPQHHAKEQNH 258 +RPAT A+ P + + P H+ +Q H Sbjct: 405 RRPATAAAAAPPSIRSPPPPRHSDQQRH 322 Score = 26.7 bits (52), Expect(3) = 9.2 Identities = 10/26 (38%), Positives = 12/26 (46%) Frame = -1 / -3 Query: 1114 KHLKIPEWLLHYHPRDQYLPN*AHLS 1037 +HL P W H D Y P HL+ Sbjct: 750 RHLHPPHWHRHVRQHDYYPPTFHHLN 673 Score = 24.4 bits (47), Expect(3) = 9.2 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = -3 / -1 Query: 3593 VSLSSAGRRQRADTWQIVFFPCA 3525 +S+SS RRQ+ + Q + FP A Sbjct: 2372 ISVSSGKRRQKDEPTQHMIFPSA 2304
>LOC_Os01g42380:12001.t03757:unspliced-genomic PDR5-like ABC transporter, putative, expressed| Length = 7112 Score = 33.6 bits (67), Expect = 9.7 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = +3 / -2 Query: 3399 NKPGRYHY*NPVLCRQPVLCRRLADGKEPLCHQL 3500 + PG+ H P CRQP +RL+ + PL Q+ Sbjct: 6091 HSPGQMHMETPSTCRQPFHGKRLSAPRPPLAEQM 5990
>LOC_Os11g39209:12011.t004375:unspliced-genomic expressed protein| Length = 1926 Score = 33.6 bits (67), Expect = 9.7 Identities = 11/21 (52%), Positives = 15/21 (71%) Frame = -1 / +1 Query: 1246 IHCKCRAFSYCIYLLSFQLEI 1184 + C+CR FSY I+ LSF + I Sbjct: 1090 LECRCRCFSYAIFALSFMVMI 1152
>LOC_Os11g11000:12011.t00988:unspliced-genomic ubiquinone biosynthesis protein ubiB, putative, expressed| Length = 5566 Score = 33.6 bits (67), Expect = 9.7 Identities = 14/36 (38%), Positives = 23/36 (63%) Frame = +1 / +2 Query: 2884 LSFSFVIFLLYAASLYWSISYVS*LSC*IFILYFRW 2991 L FS +++ ++ A L++SIS L+ I +YFRW Sbjct: 5321 LHFSSLLYTIWFAILFYSISLYRKLAICISFIYFRW 5428
>LOC_Os10g13610:12010.t01089:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5558 Score = 33.6 bits (67), Expect = 9.7 Identities = 14/28 (50%), Positives = 19/28 (67%) Frame = +2 / -2 Query: 1979 IMPLYVGVYACLPMTRGITSTLCTTLLV 2062 I+P VG+ AC + +TSTLCT LL+ Sbjct: 2353 ILP*GVGLGACFGRSCSLTSTLCTALLI 2270
>LOC_Os09g13630:12009.t01151:unspliced-genomic polycomb protein EMBRYONIC FLOWER 2, putative, expressed| Length = 12590 Score = 33.6 bits (67), Expect = 9.7 Identities = 18/64 (28%), Positives = 32/64 (50%) Frame = +2 / +1 Query: 2645 YFSNSNLLHDGLRQAMIDVRILHCFDGHVPLLCVVLMLILEVRNWELASLVLISFFSYLH 2824 Y ++ +L H L I+ L+ F H+P + +V I ++ E+ S + + +FSYL Sbjct: 4387 YMNHHHLHHMKLAFGKIEHLNLYIFAHHIPKVQLVKSQIKQLS*HEITSAIWVLYFSYLQ 4566 Query: 2825 LSRC 2836 C Sbjct: 4567 KLFC 4578
>LOC_Os09g12690:12009.t01058:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 1957 Score = 33.6 bits (67), Expect = 9.7 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = -1 / -3 Query: 1153 LYHQCPEY*NIDTKHLKIPEWLLHYHP 1073 L+H+C *+ ++HL WLLHYHP Sbjct: 1130 LFHRCLN**HNPSQHLVWL*WLLHYHP 1050
>LOC_Os08g37950:12008.t03531:unspliced-genomic copper-transporting ATPase PAA1, putative, expressed| Length = 8044 Score = 33.6 bits (67), Expect = 9.7 Identities = 16/37 (43%), Positives = 18/37 (48%) Frame = +2 / +2 Query: 746 HNLFFVLTLVQFVILYYSSNNLACYYSLLLTYIYFTT 856 HNLFF L LY S C Y +L Y +FTT Sbjct: 3770 HNLFFCLLTTGCWELYIWSYGSFCCYLYILEYFWFTT 3880
>LOC_Os04g38780:12004.t03448:unspliced-genomic MADS-box transcription factor 27, putative, expressed| Length = 3179 Score = 33.6 bits (67), Expect = 9.7 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = +2 / -3 Query: 812 ACYYSLLLTYIYFTTSCMYKY 874 AC+Y L+L YIY+T C Y Sbjct: 1404 ACFYDLVLVYIYYTIRCWKYY 1342
>LOC_Os02g58480:12002.t05419:unspliced-genomic sucrose synthase 2, putative, expressed| Length = 6836 Score = 33.6 bits (67), Expect = 9.7 Identities = 18/59 (30%), Positives = 31/59 (52%) Frame = +2 / -2 Query: 1124 VLIFWALVIKMVAFASVFLEYFQLER**VNTITECSTFTMNIISYACFLLILKVIPIIN 1300 ++ +W L+ K+++ +F FQL + T T S F I+SY F +L ++ I N Sbjct: 1858 LISYWVLIWKLLSILLIFNSEFQLFLDCIPT*TLLSFF*FWILSYFYFWKLLSILLIFN 1682
>LOC_Os02g05840:12002.t00482:unspliced-genomic expressed protein| Length = 5625 Score = 33.6 bits (67), Expect = 9.7 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = +1 / -2 Query: 3601 RRQRGRVGPMPAMSEIHVCVSNWPRYSHNS 3690 +R+ R P+P S+ H+C+S PRYS S Sbjct: 5471 KRKNIRTPPIPHRSQQHICISFNPRYSTTS 5382
>LOC_Os11g38580:12011.t03401:unspliced-genomic expressed protein| Length = 4822 Score = 32.2 bits (64), Expect(2) = 9.7 Identities = 21/64 (32%), Positives = 27/64 (42%) Frame = +1 / -3 Query: 193 REVHHINLLEP*W*NSSTWYKRWFCSFA*C*GLYAESNGLDAFLFVAGRFFHT*CKPELC 372 ++ NLL * * + T W C A GLY N DA VA + T C C Sbjct: 4478 KQTKQTNLL*T***RTRT*RDFWCCQVAAFSGLYCNLNRQDANEIVAFKPLRTPCPSTSC 4299 Query: 373 MVPY 384 +P+ Sbjct: 4298 AIPH 4287 Score = 25.8 bits (50), Expect(2) = 9.7 Identities = 10/41 (24%), Positives = 23/41 (56%) Frame = +2 / -2 Query: 1949 LVLFCIYVRCIMPLYVGVYACLPMTRGITSTLCTTLLVAIL 2071 LVL + VR ++PL+ + L + ++ ++C + + +L Sbjct: 1401 LVLLLLVVRLLLPLFSSFFLVLHLLLLLSFSVCFSFVFLVL 1279 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 1,531,954,306 Number of extensions: 25841767 Number of successful extensions: 109686 Number of sequences better than 10.0: 40 Length of query: 1248 Length of database: 55,613,886 Length adjustment: 53 Effective length of query: 1195 Effective length of database: 52,631,152 Effective search space: 62894226640 Effective search space used: 62894226640 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
