ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf30m14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_001054866.1| Oryza sativa (japonica cultivar-group) Os02g... 333 3e-87
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 244 2e-60
3dbj|AP004095.3| Oryza sativa (japonica cultivar-group) genomic D... 244 2e-60
4dbj|AP004057.3| Oryza sativa (japonica cultivar-group) genomic D... 244 2e-60
5dbj|AK228871.1| Arabidopsis thaliana mRNA for hypothetical prote... 98 3e-16
6ref|NM_118273.2| Arabidopsis thaliana nucleotide binding (AT4G21... 98 3e-16
7gb|DQ537335.1| Triticum aestivum clones BAC 1031P08; BAC 754K10;... 84 4e-12
8gb|AY494981.1| Triticum turgidum A genome HMW glutenin A gene lo... 84 4e-12
9gb|AY013753.1| Aegilops tauschii glutathione-S-transferase 2 and... 76 1e-09
10gb|DQ160242.1| Arabidopsis thaliana anaphase promoting complex s... 74 4e-09
11emb|AL161555.2|ATCHRIV55 Arabidopsis thaliana DNA chromosome 4, ... 74 4e-09
12emb|AL022603.1|ATF18E5 Arabidopsis thaliana DNA chromosome 4, BA... 74 4e-09
13gb|DQ537336.1| Triticum aestivum clones BAC 1289J04; BAC 1001P20... 66 1e-06
14gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete se... 66 1e-06
15gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complet... 56 0.001
16dbj|AP004894.1| Lotus japonicus genomic DNA, chromosome 5, clone... 56 0.001
17gb|AY146588.1| Triticum monococcum BAC clone 453N11, complete se... 52 0.015
18gb|AY534123.1|SEG_AY534122S2 Aegilops tauschii transposons Caspa... 50 0.059
19ref|XM_548129.2| PREDICTED: Canis familiaris similar to keratin ... 50 0.059
20gb|AY534122.1|SEG_AY534122S1 Aegilops tauschii transposon XJ, co... 48 0.23
21gb|AC024061.7|AC024061 Homo sapiens chromosome 15 clone RP11-232... 48 0.23
22ref|NM_001058421.1| Oryza sativa (japonica cultivar-group) Os03g... 46 0.92
23gb|AC087887.11| Homo sapiens 12 BAC RP11-27M21 (Roswell Park Can... 46 0.92
24dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.92
25emb|AL049694.9|HSDJ99E18 Human DNA sequence from clone RP1-99E18... 46 0.92
26gb|AC099324.5| Oryza sativa chromosome 3 BAC OSJNBb0043P23 genom... 46 0.92
27dbj|AK104847.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.92
28dbj|AK098991.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.92
29dbj|AK066947.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.92
30gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156... 46 0.92
31dbj|AK228243.1| Arabidopsis thaliana mRNA for hypothetical prote... 44 3.6
32ref|XM_001101991.1| PREDICTED: Macaca mulatta hypothetical prote... 44 3.6
33emb|CT027706.6| Zebrafish DNA sequence from clone CH73-343J18 in... 44 3.6
34ref|NM_112549.3| Arabidopsis thaliana unknown protein (AT3G16760... 44 3.6
35ref|NM_180673.1| Arabidopsis thaliana unknown protein (AT3G16760... 44 3.6
36gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome 44 3.6
37ref|XM_642698.1| Dictyostelium discoideum AX4 hypothetical prote... 44 3.6
38ref|XM_641207.1| Dictyostelium discoideum AX4 hypothetical prote... 44 3.6
39gb|AY705258.1| HIV-1 isolate Z11_B6 from USA envelope glycoprote... 44 3.6
40gb|AY705257.1| HIV-1 isolate Z11_B4 from USA envelope glycoprote... 44 3.6
41gb|AY705256.1| HIV-1 isolate Z11_B1 from USA envelope glycoprote... 44 3.6
42gb|AY705255.1| HIV-1 isolate Z11_A5 from USA envelope glycoprote... 44 3.6
43gb|BT015102.1| Arabidopsis thaliana At3g16760 gene, complete cds 44 3.6
44gb|AC164296.2| Mus musculus BAC clone RP24-342N6 from chromosome... 44 3.6
45gb|BT011685.1| Arabidopsis thaliana At3g16760 gene, complete cds 44 3.6
46gb|AF536880.1| HIV-1 isolate 2 clone PHI patient Z11 from USA is... 44 3.6
47gb|AF536879.1| HIV-1 isolate 2 clone PHI patient Z11 from USA is... 44 3.6
48gb|AF536878.1| HIV-1 isolate 1 clone PHI patient Z11 from USA is... 44 3.6
49gb|AF536877.1| HIV-1 isolate 1 clone PHI patient Z11 from USA is... 44 3.6
50gb|AC131572.4| Homo sapiens chromosome 11, clone RP11-496I9, com... 44 3.6
51gb|AE006639.1| Homo sapiens 16p13.3 sequence section 7 of 8 44 3.6
52emb|CR377220.10| Zebrafish DNA sequence from clone DKEY-279E10 i... 44 3.6
53emb|BX511006.10| Zebrafish DNA sequence from clone DKEY-106F13 i... 44 3.6
54emb|BX936420.9| Zebrafish DNA sequence from clone DKEY-7F16 in l... 44 3.6
55gb|AC107614.3| Homo sapiens 3 BAC RP11-719A7 (Roswell Park Cance... 44 3.6
56emb|AL135935.17| Human DNA sequence from clone RP11-193E12 on ch... 44 3.6
57emb|AL133405.17| Human DNA sequence from clone RP1-294H2 on chro... 44 3.6
58emb|AL031710.11|HS329F2 Human DNA sequence from clone LA16c-329F... 44 3.6
59emb|BX927260.8| Zebrafish DNA sequence from clone DKEY-188P4 in ... 44 3.6
60emb|BX538350.1| Cryptosporidium parvum chromosome 6, complete se... 44 3.6
61dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 44 3.6
62emb|BX571707.13| Zebrafish DNA sequence from clone DKEY-93K4 in ... 44 3.6
63gb|AC010548.10| Homo sapiens chromosome 16 clone RP11-518I8, com... 44 3.6
64dbj|AB022217.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 44 3.6
65emb|BX822556.1|CNS0A600 Arabidopsis thaliana Full-length cDNA Co... 44 3.6
66emb|BX824322.1|CNS0A5I8 Arabidopsis thaliana Full-length cDNA Co... 44 3.6
67emb|BX004794.14| Zebrafish DNA sequence from clone DKEYP-79B10 i... 44 3.6
68dbj|AP006442.2| Homo sapiens genomic DNA, chromosome 11 clone:CM... 44 3.6
69emb|CT009627.9| Mouse DNA sequence from clone RP23-71E4 on chrom... 44 3.6
70emb|AL772396.7| Zebrafish DNA sequence from clone CH211-253F14, ... 44 3.6 
>ref|NM_001054866.1| Oryza sativa (japonica cultivar-group) Os02g0785900 (Os02g0785900)
           mRNA, complete cds
          Length = 2421
 Score =  333 bits (168), Expect = 3e-87
 Identities = 225/244 (92%)
 Strand = Plus / Plus

                                                                       
Query: 43  gccgttccagctgcagttcgacaagcccatccccttccagataaaattggcagagtggaa 102
           |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 51  gccgttccagctccagttcgacaagcccatccccttccagataaaaatggcagagtggaa 110

                                                                       
Query: 103 cccagagaaggatctgcttgctatggttactgatgactccaaggttctcctgcatcgctt 162
            |||||||||||||| ||||||||||||||||||||||| |||||| |||| ||||| ||
Sbjct: 111 tccagagaaggatctacttgctatggttactgatgactctaaggttgtccttcatcgatt 170

                                                                       
Query: 163 caattggcaacggctgtggactatatcccccgggaagtgcatcacatcaatttgctggag 222
           |||||||||| |||| |||||||| ||||| ||||||||||||||||| ||||| |||||
Sbjct: 171 caattggcaaaggctatggactatctccccagggaagtgcatcacatctatttgttggag 230

                                                                       
Query: 223 ccttgatggtaaaatagtagcacttggtacaaaagatggttttgttcttttgcatgatgt 282
           ||  ||||||||||||||||||||||||||  |||||||||| |||||||||||||||||
Sbjct: 231 ccccgatggtaaaatagtagcacttggtaccgaagatggtttggttcttttgcatgatgt 290

               
Query: 283 tgag 286
           ||||
Sbjct: 291 tgag 294



 Score =  222 bits (112), Expect = 7e-54
 Identities = 196/224 (87%)
 Strand = Plus / Plus

                                                                        
Query: 980  tgttatcttatgaagaccacactacacgtttctttcctcctgctcccgtgatgcctagga 1039
            ||||||| |||||||||| |||| |||| ||||||||||| ||||| ||||| |||||||
Sbjct: 395  tgttatcctatgaagaccgcactgcacgcttctttcctcccgctcctgtgattcctagga 454

                                                                        
Query: 1040 taggtgggctcaattcgggagatactggtctcgcggatgataatgaagaagccattcagg 1099
            | |||||||| | ||| ||||| ||||||||  | ||||| ||||||||| |||||||||
Sbjct: 455  tcggtgggctgagttctggagacactggtctttcagatgagaatgaagaatccattcagg 514

                                                                        
Query: 1100 aattttcaagtgcttcgtgtcaatgttttaatattctgggcactggtgataaagatggtt 1159
            |||||||||| ||||| || ||  |||||||||||||| ||| ||||||||||| |||||
Sbjct: 515  aattttcaagcgcttcctgccagcgttttaatattctgtgcagtggtgataaaggtggtt 574

                                                        
Query: 1160 gcatttgcctcagtatttttggaatatttccagttggaaagata 1203
            |||||||| ||||||| ||||||||||| |||||||||||||||
Sbjct: 575  gcatttgcttcagtatctttggaatattcccagttggaaagata 618



 Score = 91.7 bits (46), Expect = 2e-14
 Identities = 76/86 (88%)
 Strand = Plus / Plus

                                                                       
Query: 891 agaatgggaagatgttacgaagtataaaatctcatgatgttgccattgtatgtctgaatt 950
           |||||||||| ||| || |||| |||||||| ||||||||||||||||||||| |||| |
Sbjct: 293 agaatgggaaaatgctaagaagaataaaatcccatgatgttgccattgtatgtttgaact 352

                                     
Query: 951 gggcagaagatgaaccgctatcaagg 976
           ||||||||||||| |  |||||||||
Sbjct: 353 gggcagaagatgagcttctatcaagg 378
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score =  244 bits (123), Expect = 2e-60
 Identities = 219/251 (87%)
 Strand = Plus / Plus

                                                                            
Query: 980      tgttatcttatgaagaccacactacacgtttctttcctcctgctcccgtgatgcctagga 1039
                ||||||| |||||||||| |||| |||| ||||||||||| ||||| ||||| |||||||
Sbjct: 33383952 tgttatcctatgaagaccgcactgcacgcttctttcctcccgctcctgtgattcctagga 33384011

                                                                            
Query: 1040     taggtgggctcaattcgggagatactggtctcgcggatgataatgaagaagccattcagg 1099
                | |||||||| | ||| ||||| ||||||||  | ||||| ||||||||| |||||||||
Sbjct: 33384012 tcggtgggctgagttctggagacactggtctttcagatgagaatgaagaatccattcagg 33384071

                                                                            
Query: 1100     aattttcaagtgcttcgtgtcaatgttttaatattctgggcactggtgataaagatggtt 1159
                |||||||||| ||||| || ||  |||||||||||||| ||| ||||||||||| |||||
Sbjct: 33384072 aattttcaagcgcttcctgccagcgttttaatattctgtgcagtggtgataaaggtggtt 33384131

                                                                            
Query: 1160     gcatttgcctcagtatttttggaatatttccagttggaaagatagtaagtaaatacaata 1219
                |||||||| ||||||| ||||||||||| |||||||||||||||||||||| |||||| |
Sbjct: 33384132 gcatttgcttcagtatctttggaatattcccagttggaaagatagtaagtagatacaaca 33384191

                           
Query: 1220     actgaatgctc 1230
                 |||| |||||
Sbjct: 33384192 cctgagtgctc 33384202



 Score =  145 bits (73), Expect = 1e-30
 Identities = 103/113 (91%)
 Strand = Plus / Plus

                                                                            
Query: 80       cagataaaattggcagagtggaacccagagaaggatctgcttgctatggttactgatgac 139
                ||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 33382747 cagataaaaatggcagagtggaatccagagaaggatctacttgctatggttactgatgac 33382806

                                                                     
Query: 140      tccaaggttctcctgcatcgcttcaattggcaacggctgtggactatatcccc 192
                || |||||| |||| ||||| |||||||||||| |||| |||||||| |||||
Sbjct: 33382807 tctaaggttgtccttcatcgattcaattggcaaaggctatggactatctcccc 33382859



 Score =  137 bits (69), Expect = 3e-28
 Identities = 93/101 (92%)
 Strand = Plus / Plus

                                                                            
Query: 194      gggaagtgcatcacatcaatttgctggagccttgatggtaaaatagtagcacttggtaca 253
                ||||||||||||||||| ||||| |||||||  |||||||||||||||||||||||||| 
Sbjct: 33383069 gggaagtgcatcacatctatttgttggagccccgatggtaaaatagtagcacttggtacc 33383128

                                                         
Query: 254      aaagatggttttgttcttttgcatgatgttgaggtctgtat 294
                 |||||||||| ||||||||||||||||||||||| |||||
Sbjct: 33383129 gaagatggtttggttcttttgcatgatgttgaggtgtgtat 33383169



 Score = 99.6 bits (50), Expect = 7e-17
 Identities = 86/98 (87%)
 Strand = Plus / Plus

                                                                            
Query: 880      gtgctaatcgcagaatgggaagatgttacgaagtataaaatctcatgatgttgccattgt 939
                ||||| || |||||||||||| ||| || |||| |||||||| |||||||||||||||||
Sbjct: 33383596 gtgctgattgcagaatgggaaaatgctaagaagaataaaatcccatgatgttgccattgt 33383655

                                                      
Query: 940      atgtctgaattgggcagaagatgaaccgctatcaaggg 977
                |||| |||| |||||||||||||| |  ||||||||||
Sbjct: 33383656 atgtttgaactgggcagaagatgagcttctatcaaggg 33383693



 Score = 71.9 bits (36), Expect = 2e-08
 Identities = 39/40 (97%)
 Strand = Plus / Plus

                                                        
Query: 43       gccgttccagctgcagttcgacaagcccatccccttccag 82
                |||||||||||| |||||||||||||||||||||||||||
Sbjct: 33380516 gccgttccagctccagttcgacaagcccatccccttccag 33380555
to top
>dbj|AP004095.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1715_H01
          Length = 138733

 Score =  244 bits (123), Expect = 2e-60
 Identities = 219/251 (87%)
 Strand = Plus / Plus

                                                                          
Query: 980    tgttatcttatgaagaccacactacacgtttctttcctcctgctcccgtgatgcctagga 1039
              ||||||| |||||||||| |||| |||| ||||||||||| ||||| ||||| |||||||
Sbjct: 124702 tgttatcctatgaagaccgcactgcacgcttctttcctcccgctcctgtgattcctagga 124761

                                                                          
Query: 1040   taggtgggctcaattcgggagatactggtctcgcggatgataatgaagaagccattcagg 1099
              | |||||||| | ||| ||||| ||||||||  | ||||| ||||||||| |||||||||
Sbjct: 124762 tcggtgggctgagttctggagacactggtctttcagatgagaatgaagaatccattcagg 124821

                                                                          
Query: 1100   aattttcaagtgcttcgtgtcaatgttttaatattctgggcactggtgataaagatggtt 1159
              |||||||||| ||||| || ||  |||||||||||||| ||| ||||||||||| |||||
Sbjct: 124822 aattttcaagcgcttcctgccagcgttttaatattctgtgcagtggtgataaaggtggtt 124881

                                                                          
Query: 1160   gcatttgcctcagtatttttggaatatttccagttggaaagatagtaagtaaatacaata 1219
              |||||||| ||||||| ||||||||||| |||||||||||||||||||||| |||||| |
Sbjct: 124882 gcatttgcttcagtatctttggaatattcccagttggaaagatagtaagtagatacaaca 124941

                         
Query: 1220   actgaatgctc 1230
               |||| |||||
Sbjct: 124942 cctgagtgctc 124952



 Score =  145 bits (73), Expect = 1e-30
 Identities = 103/113 (91%)
 Strand = Plus / Plus

                                                                          
Query: 80     cagataaaattggcagagtggaacccagagaaggatctgcttgctatggttactgatgac 139
              ||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 123497 cagataaaaatggcagagtggaatccagagaaggatctacttgctatggttactgatgac 123556

                                                                   
Query: 140    tccaaggttctcctgcatcgcttcaattggcaacggctgtggactatatcccc 192
              || |||||| |||| ||||| |||||||||||| |||| |||||||| |||||
Sbjct: 123557 tctaaggttgtccttcatcgattcaattggcaaaggctatggactatctcccc 123609



 Score =  137 bits (69), Expect = 3e-28
 Identities = 93/101 (92%)
 Strand = Plus / Plus

                                                                          
Query: 194    gggaagtgcatcacatcaatttgctggagccttgatggtaaaatagtagcacttggtaca 253
              ||||||||||||||||| ||||| |||||||  |||||||||||||||||||||||||| 
Sbjct: 123819 gggaagtgcatcacatctatttgttggagccccgatggtaaaatagtagcacttggtacc 123878

                                                       
Query: 254    aaagatggttttgttcttttgcatgatgttgaggtctgtat 294
               |||||||||| ||||||||||||||||||||||| |||||
Sbjct: 123879 gaagatggtttggttcttttgcatgatgttgaggtgtgtat 123919



 Score = 99.6 bits (50), Expect = 7e-17
 Identities = 86/98 (87%)
 Strand = Plus / Plus

                                                                          
Query: 880    gtgctaatcgcagaatgggaagatgttacgaagtataaaatctcatgatgttgccattgt 939
              ||||| || |||||||||||| ||| || |||| |||||||| |||||||||||||||||
Sbjct: 124346 gtgctgattgcagaatgggaaaatgctaagaagaataaaatcccatgatgttgccattgt 124405

                                                    
Query: 940    atgtctgaattgggcagaagatgaaccgctatcaaggg 977
              |||| |||| |||||||||||||| |  ||||||||||
Sbjct: 124406 atgtttgaactgggcagaagatgagcttctatcaaggg 124443



 Score = 71.9 bits (36), Expect = 2e-08
 Identities = 39/40 (97%)
 Strand = Plus / Plus

                                                      
Query: 43     gccgttccagctgcagttcgacaagcccatccccttccag 82
              |||||||||||| |||||||||||||||||||||||||||
Sbjct: 121266 gccgttccagctccagttcgacaagcccatccccttccag 121305
to top
>dbj|AP004057.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1316_E06
          Length = 110197

 Score =  244 bits (123), Expect = 2e-60
 Identities = 219/251 (87%)
 Strand = Plus / Plus

                                                                         
Query: 980   tgttatcttatgaagaccacactacacgtttctttcctcctgctcccgtgatgcctagga 1039
             ||||||| |||||||||| |||| |||| ||||||||||| ||||| ||||| |||||||
Sbjct: 14571 tgttatcctatgaagaccgcactgcacgcttctttcctcccgctcctgtgattcctagga 14630

                                                                         
Query: 1040  taggtgggctcaattcgggagatactggtctcgcggatgataatgaagaagccattcagg 1099
             | |||||||| | ||| ||||| ||||||||  | ||||| ||||||||| |||||||||
Sbjct: 14631 tcggtgggctgagttctggagacactggtctttcagatgagaatgaagaatccattcagg 14690

                                                                         
Query: 1100  aattttcaagtgcttcgtgtcaatgttttaatattctgggcactggtgataaagatggtt 1159
             |||||||||| ||||| || ||  |||||||||||||| ||| ||||||||||| |||||
Sbjct: 14691 aattttcaagcgcttcctgccagcgttttaatattctgtgcagtggtgataaaggtggtt 14750

                                                                         
Query: 1160  gcatttgcctcagtatttttggaatatttccagttggaaagatagtaagtaaatacaata 1219
             |||||||| ||||||| ||||||||||| |||||||||||||||||||||| |||||| |
Sbjct: 14751 gcatttgcttcagtatctttggaatattcccagttggaaagatagtaagtagatacaaca 14810

                        
Query: 1220  actgaatgctc 1230
              |||| |||||
Sbjct: 14811 cctgagtgctc 14821



 Score =  145 bits (73), Expect = 1e-30
 Identities = 103/113 (91%)
 Strand = Plus / Plus

                                                                         
Query: 80    cagataaaattggcagagtggaacccagagaaggatctgcttgctatggttactgatgac 139
             ||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 13366 cagataaaaatggcagagtggaatccagagaaggatctacttgctatggttactgatgac 13425

                                                                  
Query: 140   tccaaggttctcctgcatcgcttcaattggcaacggctgtggactatatcccc 192
             || |||||| |||| ||||| |||||||||||| |||| |||||||| |||||
Sbjct: 13426 tctaaggttgtccttcatcgattcaattggcaaaggctatggactatctcccc 13478



 Score =  137 bits (69), Expect = 3e-28
 Identities = 93/101 (92%)
 Strand = Plus / Plus

                                                                         
Query: 194   gggaagtgcatcacatcaatttgctggagccttgatggtaaaatagtagcacttggtaca 253
             ||||||||||||||||| ||||| |||||||  |||||||||||||||||||||||||| 
Sbjct: 13688 gggaagtgcatcacatctatttgttggagccccgatggtaaaatagtagcacttggtacc 13747

                                                      
Query: 254   aaagatggttttgttcttttgcatgatgttgaggtctgtat 294
              |||||||||| ||||||||||||||||||||||| |||||
Sbjct: 13748 gaagatggtttggttcttttgcatgatgttgaggtgtgtat 13788



 Score = 99.6 bits (50), Expect = 7e-17
 Identities = 86/98 (87%)
 Strand = Plus / Plus

                                                                         
Query: 880   gtgctaatcgcagaatgggaagatgttacgaagtataaaatctcatgatgttgccattgt 939
             ||||| || |||||||||||| ||| || |||| |||||||| |||||||||||||||||
Sbjct: 14215 gtgctgattgcagaatgggaaaatgctaagaagaataaaatcccatgatgttgccattgt 14274

                                                   
Query: 940   atgtctgaattgggcagaagatgaaccgctatcaaggg 977
             |||| |||| |||||||||||||| |  ||||||||||
Sbjct: 14275 atgtttgaactgggcagaagatgagcttctatcaaggg 14312



 Score = 71.9 bits (36), Expect = 2e-08
 Identities = 39/40 (97%)
 Strand = Plus / Plus

                                                     
Query: 43    gccgttccagctgcagttcgacaagcccatccccttccag 82
             |||||||||||| |||||||||||||||||||||||||||
Sbjct: 11135 gccgttccagctccagttcgacaagcccatccccttccag 11174
to top
>dbj|AK228871.1| Arabidopsis thaliana mRNA for hypothetical protein, clone:
           RAFL16-19-J05
          Length = 2658

 Score = 97.6 bits (49), Expect = 3e-16
 Identities = 106/125 (84%)
 Strand = Plus / Plus

                                                                       
Query: 47  ttccagctgcagttcgacaagcccatccccttccagataaaattggcagagtggaaccca 106
           |||||||| ||||||||||||||||| || || ||||| ||  | || ||||||||||| 
Sbjct: 215 ttccagctccagttcgacaagcccataccttttcagattaagatagctgagtggaacccg 274

                                                                       
Query: 107 gagaaggatctgcttgctatggttactgatgactccaaggttctcctgcatcgcttcaat 166
           ||||||||| | || || ||||||||||| ||||||||| || | |||||||| ||||||
Sbjct: 275 gagaaggatttactggcaatggttactgaggactccaagattttgctgcatcggttcaat 334

                
Query: 167 tggca 171
           |||||
Sbjct: 335 tggca 339
to top
>ref|NM_118273.2| Arabidopsis thaliana nucleotide binding (AT4G21530) mRNA, complete
           cds
          Length = 1705

 Score = 97.6 bits (49), Expect = 3e-16
 Identities = 106/125 (84%)
 Strand = Plus / Plus

                                                                       
Query: 47  ttccagctgcagttcgacaagcccatccccttccagataaaattggcagagtggaaccca 106
           |||||||| ||||||||||||||||| || || ||||| ||  | || ||||||||||| 
Sbjct: 215 ttccagctccagttcgacaagcccataccttttcagattaagatagctgagtggaacccg 274

                                                                       
Query: 107 gagaaggatctgcttgctatggttactgatgactccaaggttctcctgcatcgcttcaat 166
           ||||||||| | || || ||||||||||| ||||||||| || | |||||||| ||||||
Sbjct: 275 gagaaggatttactggcaatggttactgaggactccaagattttgctgcatcggttcaat 334

                
Query: 167 tggca 171
           |||||
Sbjct: 335 tggca 339
to top
>gb|DQ537335.1| Triticum aestivum clones BAC 1031P08; BAC 754K10; BAC 1344C16, complete
             sequence
          Length = 292102

 Score = 83.8 bits (42), Expect = 4e-12
 Identities = 72/82 (87%)
 Strand = Plus / Plus

                                                                         
Query: 3416  tcactactgaaatccagttctttgccgtcagccagttctttgccgtcggctggctgacgg 3475
             ||||||||| ||||  | ||||||| ||||||||| ||||||||||| ||| ||||||||
Sbjct: 90255 tcactactggaatcaggatctttgctgtcagccagctctttgccgtctgctagctgacgg 90314

                                   
Query: 3476  caaagaacctctttgccatcag 3497
             |||||||  |||||||||||||
Sbjct: 90315 caaagaagttctttgccatcag 90336
to top
>gb|AY494981.1| Triticum turgidum A genome HMW glutenin A gene locus, sequence
          Length = 307015

 Score = 83.8 bits (42), Expect = 4e-12
 Identities = 72/82 (87%)
 Strand = Plus / Plus

                                                                         
Query: 3416  tcactactgaaatccagttctttgccgtcagccagttctttgccgtcggctggctgacgg 3475
             ||||||||| ||||  | ||||||| ||||||||| ||||||||||| ||| ||||||||
Sbjct: 69665 tcactactggaatcaggatctttgctgtcagccagctctttgccgtctgctagctgacgg 69724

                                   
Query: 3476  caaagaacctctttgccatcag 3497
             |||||||  |||||||||||||
Sbjct: 69725 caaagaagttctttgccatcag 69746
to top
>gb|AY013753.1| Aegilops tauschii glutathione-S-transferase 2 and glutathione
            S-transferase 1 genes, complete cds
          Length = 13710

 Score = 75.8 bits (38), Expect = 1e-09
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                        
Query: 3436 tttgccgtcagccagttctttgccgtcggctggctgacggcaaagaacctctttgccatc 3495
            |||||| || ||||| ||||||||||| ||| ||||||||||||||| ||||||||||||
Sbjct: 5910 tttgccatctgccagctctttgccgtctgctagctgacggcaaagaagctctttgccatc 5969

              
Query: 3496 ag 3497
            ||
Sbjct: 5970 ag 5971



 Score = 52.0 bits (26), Expect = 0.015
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                          
Query: 3452 tctttgccgtcggctggctgacggcaaaga 3481
            |||||||||||||||||| |||||||||||
Sbjct: 6065 tctttgccgtcggctggcggacggcaaaga 6094



 Score = 44.1 bits (22), Expect = 3.6
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 3433 ttctttgccgtcagccagttctttgccgtc 3462
            |||||||||||| |||| ||||||||||||
Sbjct: 6014 ttctttgccgtctgccacttctttgccgtc 5985



 Score = 44.1 bits (22), Expect = 3.6
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 3466 tggctgacggcaaagaacctctttgccatc 3495
            |||| |||||||||||| ||||||||||||
Sbjct: 5998 tggcagacggcaaagaagctctttgccatc 6027



 Score = 44.1 bits (22), Expect = 3.6
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 3452 tctttgccgtcggctggctgacggcaaaga 3481
            ||||||||||| |||||| |||||||||||
Sbjct: 6064 tctttgccgtccgctggcggacggcaaaga 6035



 Score = 44.1 bits (22), Expect = 3.6
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 3562 ctttgtcgtctgccagcggacgacaaagag 3591
            ||||| ||||||||||| ||||||||||||
Sbjct: 6147 ctttgccgtctgccagcagacgacaaagag 6176
to top
>gb|DQ160242.1| Arabidopsis thaliana anaphase promoting complex subunit 4 mRNA,
           complete cds
          Length = 2250

 Score = 73.8 bits (37), Expect = 4e-09
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                       
Query: 95  gagtggaacccagagaaggatctgcttgctatggttactgatgactccaaggttctcctg 154
           ||||||||||| ||||||||| | || || ||||||||||| ||||||||| || | |||
Sbjct: 106 gagtggaacccggagaaggatttactggcaatggttactgaggactccaagattttgctg 165

                            
Query: 155 catcgcttcaattggca 171
           ||||| |||||||||||
Sbjct: 166 catcggttcaattggca 182



 Score = 44.1 bits (22), Expect = 3.6
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 47 ttccagctgcagttcgacaagcccat 72
          |||||||| |||||||||||||||||
Sbjct: 34 ttccagctccagttcgacaagcccat 59
to top
>emb|AL161555.2|ATCHRIV55 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 55
          Length = 194916

 Score = 73.8 bits (37), Expect = 4e-09
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                         
Query: 95    gagtggaacccagagaaggatctgcttgctatggttactgatgactccaaggttctcctg 154
             ||||||||||| ||||||||| | || || ||||||||||| ||||||||| || | |||
Sbjct: 68783 gagtggaacccggagaaggatttactggcaatggttactgaggactccaagattttgctg 68842

                              
Query: 155   catcgcttcaattggca 171
             ||||| |||||||||||
Sbjct: 68843 catcggttcaattggca 68859



 Score = 44.1 bits (22), Expect = 3.6
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 47    ttccagctgcagttcgacaagcccat 72
             |||||||| |||||||||||||||||
Sbjct: 68651 ttccagctccagttcgacaagcccat 68676
to top
>emb|AL022603.1|ATF18E5 Arabidopsis thaliana DNA chromosome 4, BAC clone F18E5 (ESSAII project)
          Length = 95266

 Score = 73.8 bits (37), Expect = 4e-09
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                         
Query: 95    gagtggaacccagagaaggatctgcttgctatggttactgatgactccaaggttctcctg 154
             ||||||||||| ||||||||| | || || ||||||||||| ||||||||| || | |||
Sbjct: 55775 gagtggaacccggagaaggatttactggcaatggttactgaggactccaagattttgctg 55834

                              
Query: 155   catcgcttcaattggca 171
             ||||| |||||||||||
Sbjct: 55835 catcggttcaattggca 55851



 Score = 44.1 bits (22), Expect = 3.6
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 47    ttccagctgcagttcgacaagcccat 72
             |||||||| |||||||||||||||||
Sbjct: 55643 ttccagctccagttcgacaagcccat 55668
to top
>gb|DQ537336.1| Triticum aestivum clones BAC 1289J04; BAC 1001P20, complete sequence
          Length = 206063

 Score = 65.9 bits (33), Expect = 1e-06
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                       
Query: 3436   tttgccgtcagccagttctttgccgtcggctggctgacggcaaagaacctctttgcc 3492
              ||||||||| |||| ||||||| |||| |||||||||||||||||||  ||||||||
Sbjct: 131100 tttgccgtctgccaattctttgtcgtctgctggctgacggcaaagaaggtctttgcc 131044



 Score = 44.1 bits (22), Expect = 3.6
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 3433   ttctttgccgtcagccagttctttgccgtc 3462
              ||||||||| ||||||||||||||| ||||
Sbjct: 130996 ttctttgccatcagccagttctttgacgtc 131025
to top
>gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete sequence
          Length = 285506

 Score = 65.9 bits (33), Expect = 1e-06
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                       
Query: 3436   tttgccgtcagccagttctttgccgtcggctggctgacggcaaagaacctctttgcc 3492
              ||||||||| |||| ||||||| |||| |||||||||||||||||||  ||||||||
Sbjct: 112605 tttgccgtctgccaattctttgtcgtctgctggctgacggcaaagaaggtctttgcc 112549



 Score = 44.1 bits (22), Expect = 3.6
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 3433   ttctttgccgtcagccagttctttgccgtc 3462
              ||||||||| ||||||||||||||| ||||
Sbjct: 112501 ttctttgccatcagccagttctttgacgtc 112530
to top
>gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complete sequence
          Length = 114996

 Score = 56.0 bits (28), Expect = 0.001
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                         
Query: 3454  tttgccgtcggctggctgacggcaaagaacctctttgccatcag 3497
             ||||||||| ||| ||||||||||||||  ||||||||||||||
Sbjct: 12607 tttgccgtctgctagctgacggcaaagacactctttgccatcag 12650



 Score = 44.1 bits (22), Expect = 3.6
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 3433  ttctttgccgtcagccagttctttgccgtc 3462
             |||||| || ||||||||||||||||||||
Sbjct: 12692 ttctttcccatcagccagttctttgccgtc 12663
to top
>dbj|AP004894.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT17D01, TM0024,
             complete sequence
          Length = 80930

 Score = 56.0 bits (28), Expect = 0.001
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                         
Query: 1696  accagtatcattatcattatcattgtgt 1723
             ||||||||||||||||||||||||||||
Sbjct: 49973 accagtatcattatcattatcattgtgt 49946
to top
>gb|AY146588.1| Triticum monococcum BAC clone 453N11, complete sequence
          Length = 285444

 Score = 52.0 bits (26), Expect = 0.015
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                            
Query: 3436   tttgccgtcagccagttctttgccgtcggctggctgacggcaaaga 3481
              |||||| || ||||||||||||||||| ||| || |||||||||||
Sbjct: 175932 tttgccatctgccagttctttgccgtccgctagcggacggcaaaga 175887
to top
>gb|AY534123.1|SEG_AY534122S2 Aegilops tauschii transposons Caspar, XJ, Angela, and XJ, complete
              sequence; LRR protein WM1.7 (WM1.7) and LRR protein WM1.12
              (WM1.12) genes, complete cds; transposons Ophelia2,
              Angela3s, and XJ3, complete sequence; LRR protein WM1.3
              (WM1.3) gene, complete cds; Stowaway MITE, transposons XJ1,
              Jody, Angela, and XJ and Stowaway MITE, complete sequence;
              LRR protein WM1.2 (WM1.2) and LLR protein WM1.1 (WM1.1)
              genes, complete cds; transposons XJ, XA, Angela, and Fred
              and WM1.11 gene, complete sequence; RPM1-like sequence and
              LRR protein WM1.10 (WM1.10) genes, complete cds; and
              transposon XJ, complete sequence
          Length = 198649

 Score = 50.1 bits (25), Expect = 0.059
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                           
Query: 3451   ttctttgccgtcggctggctgacggcaaagaacctctttgccatc 3495
              |||||||||||| ||| || ||||||||||||  |||||||||||
Sbjct: 129899 ttctttgccgtctgctagcagacggcaaagaaggtctttgccatc 129943



 Score = 48.1 bits (24), Expect = 0.23
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                              
Query: 3434   tctttgccgtcagccagttctttgccgtcggctggctgacggcaaaga 3481
              |||||||| || | || |||||||||||| |||||| |||||||||||
Sbjct: 129933 tctttgccatctgtcatttctttgccgtctgctggcagacggcaaaga 129980
to top
>ref|XM_548129.2| PREDICTED: Canis familiaris similar to keratin 25A (LOC491009), mRNA
          Length = 3947

 Score = 50.1 bits (25), Expect = 0.059
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                     
Query: 2661 acctcctccacgatggtcttcgtca 2685
            |||||||||||||||||||||||||
Sbjct: 2618 acctcctccacgatggtcttcgtca 2594
to top
>gb|AY534122.1|SEG_AY534122S1 Aegilops tauschii transposon XJ, complete sequence; putative Bowman
             Birk trypsin inhibitor gene, complete cds; Stowaway MITE,
             complete sequence; and insertion sequences xl_tt1a and
             xl_tt1b putative ripening related protein genes, complete
             cds
          Length = 26073

 Score = 48.1 bits (24), Expect = 0.23
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                             
Query: 3434  tctttgccgtcagccagttctttgccgtcggctggctgacggcaaaga 3481
             |||||||| || | || |||||||||||| |||||| |||||||||||
Sbjct: 20130 tctttgccatctgtcatttctttgccgtctgctggcagacggcaaaga 20177



 Score = 46.1 bits (23), Expect = 0.92
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 3454  tttgccgtcggctggctgacggcaaag 3480
             ||||||||| |||||||||||||||||
Sbjct: 23010 tttgccgtctgctggctgacggcaaag 23036
to top
>gb|AC024061.7|AC024061 Homo sapiens chromosome 15 clone RP11-232J12 map 15q21.3, complete
              sequence
          Length = 157042

 Score = 48.1 bits (24), Expect = 0.23
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 231    gtaaaatagtagcacttggtacaa 254
              ||||||||||||||||||||||||
Sbjct: 141682 gtaaaatagtagcacttggtacaa 141659
to top
>ref|NM_001058421.1| Oryza sativa (japonica cultivar-group) Os03g0847600 (Os03g0847600)
            mRNA, complete cds
          Length = 2071

 Score = 46.1 bits (23), Expect = 0.92
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 2484 cccatccggcaggtcaatttctt 2506
            |||||||||||||||||||||||
Sbjct: 1739 cccatccggcaggtcaatttctt 1761
to top
>gb|AC087887.11| Homo sapiens 12 BAC RP11-27M21 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 104526

 Score = 46.1 bits (23), Expect = 0.92
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 3005  ttaaataataattttgtagcata 3027
             |||||||||||||||||||||||
Sbjct: 13329 ttaaataataattttgtagcata 13351
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.92
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 2484     cccatccggcaggtcaatttctt 2506
                |||||||||||||||||||||||
Sbjct: 35424551 cccatccggcaggtcaatttctt 35424573
to top
>emb|AL049694.9|HSDJ99E18 Human DNA sequence from clone RP1-99E18 on chromosome 6q25.1-26
             Contains part of the gene for a novel protein similar to
             C1-tetrahydrofolate synthases (contains DKFZP586G1517
             protein and FLJ21145, contains a tetrahydrofolate
             dehydrogenase/cyclohydrolase domain) and an
             ADP-riboslyation factor-like 4 (ARL4) pseudogene, complete
             sequence
          Length = 123296

 Score = 46.1 bits (23), Expect = 0.92
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 778   atttgtgattttgtattactcttcaaa 804
             |||||||||||||| ||||||||||||
Sbjct: 72688 atttgtgattttgtgttactcttcaaa 72662
to top
>gb|AC099324.5| Oryza sativa chromosome 3 BAC OSJNBb0043P23 genomic sequence, complete
             sequence
          Length = 116443

 Score = 46.1 bits (23), Expect = 0.92
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 2484  cccatccggcaggtcaatttctt 2506
             |||||||||||||||||||||||
Sbjct: 33975 cccatccggcaggtcaatttctt 33953
to top
>dbj|AK104847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-H09, full
            insert sequence
          Length = 1946

 Score = 46.1 bits (23), Expect = 0.92
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 2484 cccatccggcaggtcaatttctt 2506
            |||||||||||||||||||||||
Sbjct: 1701 cccatccggcaggtcaatttctt 1723
to top
>dbj|AK098991.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095L07, full
            insert sequence
          Length = 2055

 Score = 46.1 bits (23), Expect = 0.92
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 2484 cccatccggcaggtcaatttctt 2506
            |||||||||||||||||||||||
Sbjct: 1739 cccatccggcaggtcaatttctt 1761
to top
>dbj|AK066947.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089G06, full
            insert sequence
          Length = 2074

 Score = 46.1 bits (23), Expect = 0.92
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 2484 cccatccggcaggtcaatttctt 2506
            |||||||||||||||||||||||
Sbjct: 1742 cccatccggcaggtcaatttctt 1764
to top
>gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156G16, complete sequence
          Length = 187012

 Score = 46.1 bits (23), Expect = 0.92
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 3454  tttgccgtcggctggctgacggcaaag 3480
             ||||||||| |||||||||||||||||
Sbjct: 92930 tttgccgtccgctggctgacggcaaag 92904
to top
>dbj|AK228243.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds,
            clone: RAFL14-69-G08
          Length = 1865

 Score = 44.1 bits (22), Expect = 3.6
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 2744 gtggttttaatgctaattttggaggt 2769
            ||||||||||||||||| ||||||||
Sbjct: 748  gtggttttaatgctaatcttggaggt 773
to top
>ref|XM_001101991.1| PREDICTED: Macaca mulatta hypothetical protein LOC709592
           (LOC709592), mRNA
          Length = 1578

 Score = 44.1 bits (22), Expect = 3.6
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 198 agtgcatcacatcaatttgctg 219
           ||||||||||||||||||||||
Sbjct: 118 agtgcatcacatcaatttgctg 139
to top
>emb|CT027706.6| Zebrafish DNA sequence from clone CH73-343J18 in linkage group 22,
             complete sequence
          Length = 44510

 Score = 44.1 bits (22), Expect = 3.6
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 245   cttggtacaaaagatggttttg 266
             ||||||||||||||||||||||
Sbjct: 18929 cttggtacaaaagatggttttg 18950
to top
>ref|NM_112549.3| Arabidopsis thaliana unknown protein (AT3G16760) mRNA, complete cds
          Length = 1804

 Score = 44.1 bits (22), Expect = 3.6
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 2744 gtggttttaatgctaattttggaggt 2769
            ||||||||||||||||| ||||||||
Sbjct: 748  gtggttttaatgctaatcttggaggt 773
to top
>ref|NM_180673.1| Arabidopsis thaliana unknown protein (AT3G16760) mRNA, complete cds
          Length = 1861

 Score = 44.1 bits (22), Expect = 3.6
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 2744 gtggttttaatgctaattttggaggt 2769
            ||||||||||||||||| ||||||||
Sbjct: 748  gtggttttaatgctaatcttggaggt 773
to top
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome
          Length = 3730232

 Score = 44.1 bits (22), Expect = 3.6
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 2463    aacaggtcgctggtgccgccgcccat 2488
               ||||||| ||||||||||||||||||
Sbjct: 3136689 aacaggttgctggtgccgccgcccat 3136714
to top
>ref|XM_642698.1| Dictyostelium discoideum AX4 hypothetical protein (DDBDRAFT_0206251)
            mRNA, complete cds
          Length = 3126

 Score = 44.1 bits (22), Expect = 3.6
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 1698 cagtatcattatcattatcatt 1719
            ||||||||||||||||||||||
Sbjct: 682  cagtatcattatcattatcatt 661
to top
>ref|XM_641207.1| Dictyostelium discoideum AX4 hypothetical protein (DDBDRAFT_0190573)
            mRNA, complete cds
          Length = 2115

 Score = 44.1 bits (22), Expect = 3.6
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 1698 cagtatcattatcattatcatt 1719
            ||||||||||||||||||||||
Sbjct: 1303 cagtatcattatcattatcatt 1282
to top
>gb|AY705258.1| HIV-1 isolate Z11_B6 from USA envelope glycoprotein (env) gene,
            partial cds
          Length = 438

 Score = 44.1 bits (22), Expect = 3.6
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 1694 gtaccagtatcattatcattatcatt 1719
            |||||| |||||||||||||||||||
Sbjct: 251  gtaccattatcattatcattatcatt 226
to top
>gb|AY705257.1| HIV-1 isolate Z11_B4 from USA envelope glycoprotein (env) gene,
            partial cds
          Length = 438

 Score = 44.1 bits (22), Expect = 3.6
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 1694 gtaccagtatcattatcattatcatt 1719
            |||||| |||||||||||||||||||
Sbjct: 251  gtaccattatcattatcattatcatt 226
to top
>gb|AY705256.1| HIV-1 isolate Z11_B1 from USA envelope glycoprotein (env) gene,
            partial cds
          Length = 438

 Score = 44.1 bits (22), Expect = 3.6
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 1694 gtaccagtatcattatcattatcatt 1719
            |||||| |||||||||||||||||||
Sbjct: 251  gtaccattatcattatcattatcatt 226
to top
>gb|AY705255.1| HIV-1 isolate Z11_A5 from USA envelope glycoprotein (env) gene,
            partial cds
          Length = 438

 Score = 44.1 bits (22), Expect = 3.6
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 1694 gtaccagtatcattatcattatcatt 1719
            |||||| |||||||||||||||||||
Sbjct: 251  gtaccattatcattatcattatcatt 226
to top
>gb|BT015102.1| Arabidopsis thaliana At3g16760 gene, complete cds
          Length = 1428

 Score = 44.1 bits (22), Expect = 3.6
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 2744 gtggttttaatgctaattttggaggt 2769
            ||||||||||||||||| ||||||||
Sbjct: 548  gtggttttaatgctaatcttggaggt 573
to top
>gb|AC164296.2| Mus musculus BAC clone RP24-342N6 from chromosome 16, complete sequence
          Length = 206816

 Score = 44.1 bits (22), Expect = 3.6
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 2807  ttcttctcctatctacatttgt 2828
             ||||||||||||||||||||||
Sbjct: 73219 ttcttctcctatctacatttgt 73198
to top
>gb|BT011685.1| Arabidopsis thaliana At3g16760 gene, complete cds
          Length = 1799

 Score = 44.1 bits (22), Expect = 3.6
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 2744 gtggttttaatgctaattttggaggt 2769
            ||||||||||||||||| ||||||||
Sbjct: 729  gtggttttaatgctaatcttggaggt 754
to top
>gb|AF536880.1| HIV-1 isolate 2 clone PHI patient Z11 from USA isolation-source
            saliva envelope glycoprotein (env) gene, partial cds
          Length = 408

 Score = 44.1 bits (22), Expect = 3.6
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 1694 gtaccagtatcattatcattatcatt 1719
            |||||| |||||||||||||||||||
Sbjct: 251  gtaccattatcattatcattatcatt 226
to top
>gb|AF536879.1| HIV-1 isolate 2 clone PHI patient Z11 from USA isolation-source
            plasma envelope glycoprotein (env) gene, partial cds
          Length = 408

 Score = 44.1 bits (22), Expect = 3.6
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 1694 gtaccagtatcattatcattatcatt 1719
            |||||| |||||||||||||||||||
Sbjct: 251  gtaccattatcattatcattatcatt 226
to top
>gb|AF536878.1| HIV-1 isolate 1 clone PHI patient Z11 from USA isolation-source
            saliva nonfunctional envelope glycoprotein (env) gene,
            partial cds
          Length = 409

 Score = 44.1 bits (22), Expect = 3.6
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 1694 gtaccagtatcattatcattatcatt 1719
            |||||| |||||||||||||||||||
Sbjct: 251  gtaccattatcattatcattatcatt 226
to top
>gb|AF536877.1| HIV-1 isolate 1 clone PHI patient Z11 from USA isolation-source
            plasma nonfunctional envelope glycoprotein (env) gene,
            partial cds
          Length = 409

 Score = 44.1 bits (22), Expect = 3.6
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 1694 gtaccagtatcattatcattatcatt 1719
            |||||| |||||||||||||||||||
Sbjct: 251  gtaccattatcattatcattatcatt 226
to top
>gb|AC131572.4| Homo sapiens chromosome 11, clone RP11-496I9, complete sequence
          Length = 162145

 Score = 44.1 bits (22), Expect = 3.6
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 1366   ttatttctgtaatatttttatg 1387
              ||||||||||||||||||||||
Sbjct: 109995 ttatttctgtaatatttttatg 109974
to top
>gb|AE006639.1| Homo sapiens 16p13.3 sequence section 7 of 8
          Length = 270150

 Score = 44.1 bits (22), Expect = 3.6
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 3255  tacatgtgtggctcccaaattg 3276
             ||||||||||||||||||||||
Sbjct: 95986 tacatgtgtggctcccaaattg 96007
to top
>emb|CR377220.10| Zebrafish DNA sequence from clone DKEY-279E10 in linkage group 1,
              complete sequence
          Length = 169012

 Score = 44.1 bits (22), Expect = 3.6
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 245    cttggtacaaaagatggttttg 266
              ||||||||||||||||||||||
Sbjct: 165801 cttggtacaaaagatggttttg 165822
to top
>emb|BX511006.10| Zebrafish DNA sequence from clone DKEY-106F13 in linkage group 7,
              complete sequence
          Length = 220514

 Score = 44.1 bits (22), Expect = 3.6
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 245    cttggtacaaaagatggttttg 266
              ||||||||||||||||||||||
Sbjct: 215209 cttggtacaaaagatggttttg 215188
to top
>emb|BX936420.9| Zebrafish DNA sequence from clone DKEY-7F16 in linkage group 3,
             complete sequence
          Length = 168285

 Score = 44.1 bits (22), Expect = 3.6
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 246   ttggtacaaaagatggttttgt 267
             ||||||||||||||||||||||
Sbjct: 73515 ttggtacaaaagatggttttgt 73494
to top
>gb|AC107614.3| Homo sapiens 3 BAC RP11-719A7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 160917

 Score = 44.1 bits (22), Expect = 3.6
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 814   atgctattacagtttacttcttactt 839
             ||||||||||| ||||||||||||||
Sbjct: 23570 atgctattacattttacttcttactt 23545
to top
>emb|AL135935.17| Human DNA sequence from clone RP11-193E12 on chromosome 20 Contains
             part of the PAK7 gene for p21(CDKN1A)-activated kinase 7,
             ESTs, STSs and GSSs, complete sequence
          Length = 54649

 Score = 44.1 bits (22), Expect = 3.6
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 1699  agtatcattatcattatcattg 1720
             ||||||||||||||||||||||
Sbjct: 33391 agtatcattatcattatcattg 33370
to top
>emb|AL133405.17| Human DNA sequence from clone RP1-294H2 on chromosome 6 Contains a CpG
             island, complete sequence
          Length = 151068

 Score = 44.1 bits (22), Expect = 3.6
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1366  ttatttctgtaatatttttatg 1387
             ||||||||||||||||||||||
Sbjct: 31675 ttatttctgtaatatttttatg 31696
to top
>emb|AL031710.11|HS329F2 Human DNA sequence from clone LA16c-329F2 on chromosome 16 Contains
            STSs, GSSs and a CpG Island, complete sequence
          Length = 24753

 Score = 44.1 bits (22), Expect = 3.6
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 3255 tacatgtgtggctcccaaattg 3276
            ||||||||||||||||||||||
Sbjct: 6820 tacatgtgtggctcccaaattg 6841
to top
>emb|BX927260.8| Zebrafish DNA sequence from clone DKEY-188P4 in linkage group 22,
             complete sequence
          Length = 50202

 Score = 44.1 bits (22), Expect = 3.6
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 245   cttggtacaaaagatggttttg 266
             ||||||||||||||||||||||
Sbjct: 31274 cttggtacaaaagatggttttg 31253
to top
>emb|BX538350.1| Cryptosporidium parvum chromosome 6, complete sequence; segment 1/4
          Length = 287050

 Score = 44.1 bits (22), Expect = 3.6
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 2958   atcttgctgaatatttattctatatt 2983
              |||||||||||||||||| |||||||
Sbjct: 188075 atcttgctgaatatttatgctatatt 188100
to top
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 44.1 bits (22), Expect = 3.6
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 3447    ccagttctttgccgtcggctgg 3468
               ||||||||||||||||||||||
Sbjct: 4067068 ccagttctttgccgtcggctgg 4067089
to top
>emb|BX571707.13| Zebrafish DNA sequence from clone DKEY-93K4 in linkage group 14, complete
              sequence
          Length = 170416

 Score = 44.1 bits (22), Expect = 3.6
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 245    cttggtacaaaagatggttttg 266
              ||||||||||||||||||||||
Sbjct: 113321 cttggtacaaaagatggttttg 113342
to top
>gb|AC010548.10| Homo sapiens chromosome 16 clone RP11-518I8, complete sequence
          Length = 206466

 Score = 44.1 bits (22), Expect = 3.6
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 270   ttttgcatgatgttgaggtctg 291
             ||||||||||||||||||||||
Sbjct: 25815 ttttgcatgatgttgaggtctg 25836
to top
>dbj|AB022217.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MGL6
          Length = 79459

 Score = 44.1 bits (22), Expect = 3.6
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 2744  gtggttttaatgctaattttggaggt 2769
             ||||||||||||||||| ||||||||
Sbjct: 69810 gtggttttaatgctaatcttggaggt 69835
to top
>emb|BX822556.1|CNS0A600 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB48ZF02 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1414

 Score = 44.1 bits (22), Expect = 3.6
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 2744 gtggttttaatgctaattttggaggt 2769
            ||||||||||||||||| ||||||||
Sbjct: 370  gtggttttaatgctaatcttggaggt 395
to top
>emb|BX824322.1|CNS0A5I8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH3ZD04 of Hormone Treated Callus of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1812

 Score = 44.1 bits (22), Expect = 3.6
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 2744 gtggttttaatgctaattttggaggt 2769
            ||||||||||||||||| ||||||||
Sbjct: 730  gtggttttaatgctaatcttggaggt 755
to top
>emb|BX004794.14| Zebrafish DNA sequence from clone DKEYP-79B10 in linkage group 12,
              complete sequence
          Length = 207058

 Score = 44.1 bits (22), Expect = 3.6
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 247    tggtacaaaagatggttttgtt 268
              ||||||||||||||||||||||
Sbjct: 111371 tggtacaaaagatggttttgtt 111392
to top
>dbj|AP006442.2| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-105F10, complete
              sequence
          Length = 134532

 Score = 44.1 bits (22), Expect = 3.6
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 2366   tgacagccaagccaacacattg 2387
              ||||||||||||||||||||||
Sbjct: 106528 tgacagccaagccaacacattg 106507
to top
>emb|CT009627.9| Mouse DNA sequence from clone RP23-71E4 on chromosome 16, complete
             sequence
          Length = 257276

 Score = 44.1 bits (22), Expect = 3.6
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 2807  ttcttctcctatctacatttgt 2828
             ||||||||||||||||||||||
Sbjct: 12505 ttcttctcctatctacatttgt 12484
to top
>emb|AL772396.7| Zebrafish DNA sequence from clone CH211-253F14, complete sequence
          Length = 148465

 Score = 44.1 bits (22), Expect = 3.6
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 247   tggtacaaaagatggttttgtt 268
             ||||||||||||||||||||||
Sbjct: 66442 tggtacaaaagatggttttgtt 66421


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 773,664,419
Number of extensions: 54396039
Number of successful extensions: 255527
Number of sequences better than 10.0: 70
Number of HSP's gapped: 255519
Number of HSP's successfully gapped: 97
Length of query: 3745
Length of database: 18,610,659,111
Length adjustment: 24
Effective length of query: 3721
Effective length of database: 18,499,340,271
Effective search space: 68836045148391
Effective search space used: 68836045148391
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 15 (30.2 bits)
to top