ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf30m09 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AY256682:Os06g0493100 | 49 | 3e-06 | 2 | AK063797:Os06g0493100 | 49 | 3e-06 | 3 | AK061129:Os06g0591400 | 40 | 0.002 | 4 | AK119942:Os12g0571500 | 30 | 0.97 | 5 | Os12g0153600:Os12g0153600 | 30 | 1.3 | 6 | AK100857:Os04g0435700 | 30 | 1.3 | 7 | Os07g0597300:Os07g0597300 | 30 | 1.7 | 8 | AK069920:Os02g0554100 | 30 | 1.7 | 9 | AK060250:Os02g0554100 | 30 | 1.7 | 10 | Os05g0129100:Os05g0129100 | 29 | 2.8 | 11 | AK101096:Os01g0110500 | 28 | 3.7 | 12 | AK110133: | 28 | 4.8 | 13 | AK098899:Os07g0173200 | 28 | 4.8 | 14 | AK098856:Os07g0173200 | 28 | 4.8 | 15 | AK065275:Os07g0173200 | 28 | 4.8 | 16 | AK061624:Os07g0173200 | 28 | 4.8 | 17 | AK060607:Os07g0653800 | 28 | 4.8 | 18 | Os12g0606000:Os12g0606000 | 28 | 6.2 | 19 | AK110388: | 28 | 6.3 | 20 | AK121331:Os01g0816400 | 27 | 8.2 |
|---|
>AY256682:Os06g0493100 | Length = 82 Score = 48.9 bits (115), Expect = 3e-06 Identities = 36/84 (42%), Positives = 42/84 (50%), Gaps = 4/84 (4%) Frame = +2 Query: 95 MASFARAARFMVLFQIALFIVSAVFMSSSVCHGARELKASIGTGTLDPNRPAVCIRGPCP 274 MAS RA +VL QI + + + S AR G G LDPN P VC+ G CP Sbjct: 1 MASL-RATTLLVLMQIIMVFYTVILSCSF--SDARTFPG--GEGGLDPNHP-VCVGGACP 54 Query: 275 QPGGPYTR---PCGVRN-CPPAGQ 334 PG PYT PC RN C P G+ Sbjct: 55 TPGLPYTNPRDPCIYRNRCNPPGR 78
>AK063797:Os06g0493100 | Length = 82 Score = 48.9 bits (115), Expect = 3e-06 Identities = 36/84 (42%), Positives = 42/84 (50%), Gaps = 4/84 (4%) Frame = +2 Query: 95 MASFARAARFMVLFQIALFIVSAVFMSSSVCHGARELKASIGTGTLDPNRPAVCIRGPCP 274 MAS RA +VL QI + + + S AR G G LDPN P VC+ G CP Sbjct: 1 MASL-RATTLLVLMQIIMVFYTVILSCSF--SDARTFPG--GEGGLDPNHP-VCVGGACP 54 Query: 275 QPGGPYTR---PCGVRN-CPPAGQ 334 PG PYT PC RN C P G+ Sbjct: 55 TPGLPYTNPRDPCIYRNRCNPPGR 78
>AK061129:Os06g0591400 | Length = 170 Score = 39.7 bits (91), Expect = 0.002 Identities = 37/107 (34%), Positives = 44/107 (41%), Gaps = 21/107 (19%) Frame = +2 Query: 95 MASFARAARFMVLFQIALFIVSAVFMSSSV--CHGARELKASI------GTGTLDPN--- 241 MA+F R + L +VSAV + SV CHGA+E G DP+ Sbjct: 1 MATFTERTRLLAAL---LVVVSAVIIGCSVHVCHGAQEADLQAAGYYRRGGSMDDPDFDF 57 Query: 242 -----RPAVCIRGPCPQPGG-----PYTRPCGVRNCPPAGQP*RPLP 352 R VC GPC G P+ RP R PPA P PLP Sbjct: 58 PFPGPRHVVCNDGPCRTGPGRLRPYPFPRPLPYRQTPPA-PPSPPLP 103
>AK119942:Os12g0571500 | Length = 143 Score = 30.4 bits (67), Expect = 0.97 Identities = 15/31 (48%), Positives = 15/31 (48%) Frame = +2 Query: 224 GTLDPNRPAVCIRGPCPQPGGPYTRPCGVRN 316 G L RPA G C G PYTRPC N Sbjct: 106 GCLSRARPACPRAGGCAARGRPYTRPCTYGN 136
>Os12g0153600:Os12g0153600 | Length = 413 Score = 30.0 bits (66), Expect = 1.3 Identities = 29/102 (28%), Positives = 42/102 (41%) Frame = +2 Query: 14 KPVSYSQLETSELLTAHKAVSPSA*RTMASFARAARFMVLFQIALFIVSAVFMSSSVCHG 193 KPVS S++ ++A+ T + ++ VLF + L +V V+ S+ H Sbjct: 150 KPVSSSEVYAEFGVSAYSKYGTRTVSTSLRVLKLSQMWVLFLVILLLVCPVY---SLTHD 206 Query: 194 ARELKASIGTGTLDPNRPAVCIRGPCPQPGGPYTRPCGVRNC 319 A IGT D A C QP G + RP V C Sbjct: 207 G---SAEIGTCRFDKTSVAAL---SCKQPDGKW-RPPSVTCC 241
>AK100857:Os04g0435700 | Length = 453 Score = 30.0 bits (66), Expect = 1.3 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 6/57 (10%) Frame = -2 Query: 252 TAGRLGS------RVPVPIDALSSRAPWQTELLMNTAETMNSAIWKSTMKRAALAKD 100 T+G+LG PV IDALS P +L +TA + +W S +R A+ D Sbjct: 365 TSGQLGHGEIVDRNKPVMIDALSPDGPGCKKLEPSTAVPFAAKVWVSPSERYAIVPD 421
>Os07g0597300:Os07g0597300 | Length = 218 Score = 29.6 bits (65), Expect = 1.7 Identities = 26/76 (34%), Positives = 33/76 (43%) Frame = +2 Query: 128 VLFQIALFIVSAVFMSSSVCHGARELKASIGTGTLDPNRPAVCIRGPCPQPGGPYTRPCG 307 +L ALF F + +G R +GT D A +R P PGG RP Sbjct: 16 LLLDAALF----AFCTREAAYG-RICTRQLGTQPADGGDDARQLRTTDPAPGGRGLRPRR 70 Query: 308 VRNCPPAGQP*RPLPN 355 R+ PP G+ RP PN Sbjct: 71 RRSPPPRGRGCRP-PN 85
>AK069920:Os02g0554100 | Length = 453 Score = 29.6 bits (65), Expect = 1.7 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 6/57 (10%) Frame = -2 Query: 252 TAGRLGS------RVPVPIDALSSRAPWQTELLMNTAETMNSAIWKSTMKRAALAKD 100 T+G+LG +P IDALSS +L + A M++ +W S +R A+ D Sbjct: 370 TSGQLGHGEIVDRNIPKMIDALSSDGSACKQLESSKAVPMSAKVWVSPSERYAIVPD 426
>AK060250:Os02g0554100 | Length = 453 Score = 29.6 bits (65), Expect = 1.7 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 6/57 (10%) Frame = -2 Query: 252 TAGRLGS------RVPVPIDALSSRAPWQTELLMNTAETMNSAIWKSTMKRAALAKD 100 T+G+LG +P IDALSS +L + A M++ +W S +R A+ D Sbjct: 370 TSGQLGHGEIVDRNIPKMIDALSSDGSACKQLESSKAVPMSAKVWVSPSERYAIVPD 426
>Os05g0129100:Os05g0129100 | Length = 465 Score = 28.9 bits (63), Expect = 2.8 Identities = 18/66 (27%), Positives = 28/66 (42%) Frame = +2 Query: 209 ASIGTGTLDPNRPAVCIRGPCPQPGGPYTRPCGVRNCPPAGQP*RPLPNNGRIIIKK*KR 388 A++G L P+R C+ P P P P + P P A R L R +++ R Sbjct: 17 AALGGARLRPSRVTACLATPTPTPPPPTSAPL----APAAAAARRELSAASRAVVEDEAR 72 Query: 389 TMEGLH 406 + G + Sbjct: 73 YIVGTY 78
>AK101096:Os01g0110500 | Length = 698 Score = 28.5 bits (62), Expect = 3.7 Identities = 13/29 (44%), Positives = 14/29 (48%) Frame = +2 Query: 272 PQPGGPYTRPCGVRNCPPAGQP*RPLPNN 358 P P G T+P P AG P P PNN Sbjct: 177 PSPSGSPTKPSPASPSPIAGDPIIPTPNN 205
>AK110133: | Length = 1182 Score = 28.1 bits (61), Expect = 4.8 Identities = 11/20 (55%), Positives = 12/20 (60%) Frame = +2 Query: 245 PAVCIRGPCPQPGGPYTRPC 304 PAVC GPCP P + PC Sbjct: 504 PAVCHLGPCPPCRVPVSTPC 523
>AK098899:Os07g0173200 | Length = 534 Score = 28.1 bits (61), Expect = 4.8 Identities = 14/39 (35%), Positives = 18/39 (46%) Frame = -1 Query: 364 PSIVRERALGLASRWAVTYSARTGVGSARLWARSADAHS 248 P RERA G+A W + GV W + DAH+ Sbjct: 208 PRAARERARGMAREWKEAAERKGGVE----WTKPPDAHA 242
>AK098856:Os07g0173200 | Length = 534 Score = 28.1 bits (61), Expect = 4.8 Identities = 14/39 (35%), Positives = 18/39 (46%) Frame = -1 Query: 364 PSIVRERALGLASRWAVTYSARTGVGSARLWARSADAHS 248 P RERA G+A W + GV W + DAH+ Sbjct: 208 PRAARERARGMAREWKEAAERKGGVE----WTKPPDAHA 242
>AK065275:Os07g0173200 | Length = 534 Score = 28.1 bits (61), Expect = 4.8 Identities = 14/39 (35%), Positives = 18/39 (46%) Frame = -1 Query: 364 PSIVRERALGLASRWAVTYSARTGVGSARLWARSADAHS 248 P RERA G+A W + GV W + DAH+ Sbjct: 208 PRAARERARGMAREWKEAAERKGGVE----WTKPPDAHA 242
>AK061624:Os07g0173200 | Length = 453 Score = 28.1 bits (61), Expect = 4.8 Identities = 14/39 (35%), Positives = 18/39 (46%) Frame = -1 Query: 364 PSIVRERALGLASRWAVTYSARTGVGSARLWARSADAHS 248 P RERA G+A W + GV W + DAH+ Sbjct: 208 PRAARERARGMAREWKEAAERKGGVE----WTKPPDAHA 242
>AK060607:Os07g0653800 | Length = 121 Score = 28.1 bits (61), Expect = 4.8 Identities = 18/60 (30%), Positives = 28/60 (46%) Frame = -2 Query: 264 PRMHTAGRLGSRVPVPIDALSSRAPWQTELLMNTAETMNSAIWKSTMKRAALAKDAIVRQ 85 PRM T + + VP P+ ALS A +T+ + +A+ + + A A AI Q Sbjct: 52 PRMTTVAHVNTSVPRPLPALSMNAMMRTKRFRCFSGGAGAALHRRPVAAATAAGRAIFLQ 111
>Os12g0606000:Os12g0606000 | Length = 938 Score = 27.7 bits (60), Expect = 6.2 Identities = 19/61 (31%), Positives = 27/61 (44%) Frame = +3 Query: 180 PSATVPASSKRQSVPGLWTLTVLLCASADRAHSLADPTPVRAEYVTAHRLANPNARSRTM 359 P ++P +K PG + + L +AD SL P P A + A A NA S + Sbjct: 644 PLPSLPPPAKMPPPPGAPSHSRLPLLAADLFPSLTRPPPAGATHAAARPAAPVNANSTHI 703 Query: 360 E 362 E Sbjct: 704 E 704
>AK110388: | Length = 957 Score = 27.7 bits (60), Expect = 6.3 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = -2 Query: 279 GCGHGPRMHTAGRLGSRVPVPIDALSSRA 193 GC HG ++H +L + V V DA RA Sbjct: 176 GCQHGSQLHVTNKLQTHVVVATDADQCRA 204
>AK121331:Os01g0816400 | Length = 1997 Score = 27.3 bits (59), Expect = 8.2 Identities = 13/42 (30%), Positives = 21/42 (50%) Frame = -2 Query: 267 GPRMHTAGRLGSRVPVPIDALSSRAPWQTELLMNTAETMNSA 142 G R H +G +PV ++ L + P TE L T + M+ + Sbjct: 356 GLRTHFSGNSRVLLPVLLEKLKEKKPTMTEALSQTLQAMHKS 397 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 18,037,594 Number of extensions: 445550 Number of successful extensions: 1209 Number of sequences better than 10.0: 20 Number of HSP's gapped: 1205 Number of HSP's successfully gapped: 20 Length of query: 204 Length of database: 15,399,855 Length adjustment: 96 Effective length of query: 108 Effective length of database: 11,555,919 Effective search space: 1248039252 Effective search space used: 1248039252 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
