ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf33j01 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK102190:Os04g0430100 | 194 | 8e-50 | 2 | AK066564:Os02g0549600 | 194 | 8e-50 | 3 | AB054123: | 189 | 1e-48 | 4 | AK073846:Os01g0962600 | 186 | 2e-47 | 5 | AK108150: | 108 | 6e-24 | 6 | AK064192:Os12g0161500 | 31 | 0.89 | 7 | AK103395:Os04g0352200 | 29 | 4.4 | 8 | AK072188:Os09g0537100 | 29 | 4.4 | 9 | AK073733:Os01g0938600 | 28 | 5.7 | 10 | Os05g0241900:Os05g0241900 | 28 | 5.8 | 11 | AK112117:Os08g0151300 | 28 | 7.5 | 12 | AK111808:Os08g0151300 | 28 | 7.5 | 13 | AK101154:Os11g0163500 | 28 | 7.5 | 14 | AK109979: | 28 | 9.8 | 15 | AK101994:Os11g0598800 | 28 | 9.8 |
|---|
>AK102190:Os04g0430100 | Length = 183 Score = 194 bits (492), Expect = 8e-50 Identities = 101/154 (65%), Positives = 104/154 (67%) Frame = +1 Query: 88 MIISKKNRNEICKYLFQEGVLYAKKDYNLAKHPQIDVPNLQVIKLMQSFKSKEYVRETFS 267 MII KKNRNEICKYLFQEGVLYAKKDYNLAKHPQIDVPNLQVIKLMQSFKSKEYVRETFS Sbjct: 1 MIIPKKNRNEICKYLFQEGVLYAKKDYNLAKHPQIDVPNLQVIKLMQSFKSKEYVRETFS 60 Query: 268 WQHYYWYLTNDGIEFLRNFLNLPSEIVPATLKKSAXXXXXXXXXXXXXXXXXXXXXXXXX 447 WQ+YYWYLTNDGIE LRN+LNLPSEIVPATLKKSA Sbjct: 61 WQYYYWYLTNDGIEHLRNYLNLPSEIVPATLKKSARPPGRPFGSGPPGDRPRGPPRFEGD 120 Query: 448 XXXXXXXXXXXXXXXXXXXXXXXEKGGAPADFQP 549 EKGGAPA+FQP Sbjct: 121 RPRFGDRDGYRGGPRGAPGDFGGEKGGAPAEFQP 154
>AK066564:Os02g0549600 | Length = 183 Score = 194 bits (492), Expect = 8e-50 Identities = 101/154 (65%), Positives = 104/154 (67%) Frame = +1 Query: 88 MIISKKNRNEICKYLFQEGVLYAKKDYNLAKHPQIDVPNLQVIKLMQSFKSKEYVRETFS 267 MII KKNRNEICKYLFQEGVLYAKKDYNLAKHPQIDVPNLQVIKLMQSFKSKEYVRETFS Sbjct: 1 MIIPKKNRNEICKYLFQEGVLYAKKDYNLAKHPQIDVPNLQVIKLMQSFKSKEYVRETFS 60 Query: 268 WQHYYWYLTNDGIEFLRNFLNLPSEIVPATLKKSAXXXXXXXXXXXXXXXXXXXXXXXXX 447 WQ+YYWYLTNDGIE LRN+LNLPSEIVPATLKKSA Sbjct: 61 WQYYYWYLTNDGIEHLRNYLNLPSEIVPATLKKSARPPGRPFGSGPPGDRPRGPPRFEGD 120 Query: 448 XXXXXXXXXXXXXXXXXXXXXXXEKGGAPADFQP 549 EKGGAPA+FQP Sbjct: 121 RPRFGDRDGYRGGPRGAPGDFGGEKGGAPAEFQP 154
>AB054123: | Length = 183 Score = 189 bits (481), Expect = 1e-48 Identities = 99/154 (64%), Positives = 102/154 (66%) Frame = +1 Query: 88 MIISKKNRNEICKYLFQEGVLYAKKDYNLAKHPQIDVPNLQVIKLMQSFKSKEYVRETFS 267 MII KKNRNEICKYLFQEGVLYAKKDYNLAKHPQIDVPNLQVIK MQSFKSKEYVRETFS Sbjct: 1 MIIPKKNRNEICKYLFQEGVLYAKKDYNLAKHPQIDVPNLQVIKFMQSFKSKEYVRETFS 60 Query: 268 WQHYYWYLTNDGIEFLRNFLNLPSEIVPATLKKSAXXXXXXXXXXXXXXXXXXXXXXXXX 447 WQ+YYWYLTNDGIE L N+LNLPSEIVPATLKKSA Sbjct: 61 WQYYYWYLTNDGIEHLLNYLNLPSEIVPATLKKSARPPGRPFGSGPPGDRPRGPPRFEGD 120 Query: 448 XXXXXXXXXXXXXXXXXXXXXXXEKGGAPADFQP 549 EKGGAPA+FQP Sbjct: 121 RPRFGDRDGYRGGPRGAPGDFGGEKGGAPAEFQP 154
>AK073846:Os01g0962600 | Length = 179 Score = 186 bits (472), Expect = 2e-47 Identities = 95/154 (61%), Positives = 102/154 (66%) Frame = +1 Query: 88 MIISKKNRNEICKYLFQEGVLYAKKDYNLAKHPQIDVPNLQVIKLMQSFKSKEYVRETFS 267 MIISKKNR EICKYLF EGVLYAKKDYNLAKHP++DVPNL+VIKLMQSFKSKEYVRETFS Sbjct: 1 MIISKKNRREICKYLFHEGVLYAKKDYNLAKHPKVDVPNLEVIKLMQSFKSKEYVRETFS 60 Query: 268 WQHYYWYLTNDGIEFLRNFLNLPSEIVPATLKKSAXXXXXXXXXXXXXXXXXXXXXXXXX 447 WQHYYWYLTNDGIE LR++LNLPSE+VP TLKKSA Sbjct: 61 WQHYYWYLTNDGIEHLRSYLNLPSEVVPNTLKKSAKPPSRPFGSGPPGDRPRGPPRFEGD 120 Query: 448 XXXXXXXXXXXXXXXXXXXXXXXEKGGAPADFQP 549 EKGGAPA+FQP Sbjct: 121 RPRFGDRDGYRGGPRGAPGDFGGEKGGAPAEFQP 154
>AK108150: | Length = 156 Score = 108 bits (269), Expect = 6e-24 Identities = 50/95 (52%), Positives = 74/95 (77%) Frame = +1 Query: 88 MIISKKNRNEICKYLFQEGVLYAKKDYNLAKHPQIDVPNLQVIKLMQSFKSKEYVRETFS 267 MIISK+NR I LF+EGV+ A K++ + +HP++++PNL+V+K +QS S+ YV FS Sbjct: 1 MIISKENRKTIYASLFKEGVMVAPKNFTV-QHPELEIPNLEVVKALQSLTSRGYVHTQFS 59 Query: 268 WQHYYWYLTNDGIEFLRNFLNLPSEIVPATLKKSA 372 WQ Y++ LT++G+E+LR FL+LP+EIVPAT K+ A Sbjct: 60 WQWYFYTLTDEGVEYLREFLHLPAEIVPATHKRPA 94
>AK064192:Os12g0161500 | Length = 530 Score = 31.2 bits (69), Expect = 0.89 Identities = 14/53 (26%), Positives = 27/53 (50%) Frame = -1 Query: 375 PGRFFERGRHNLRRQVEEVAQELNAIVGEVPIVMLPREGLPDVFLRLEALHEL 217 P ++G L +++ E L+A++GE ++M P LP+ + + H L Sbjct: 323 PKMRLDKGMDQLVKEIVEKDMALSAVIGEAQMLMFPSTLLPEKYRTFQGKHYL 375
>AK103395:Os04g0352200 | Length = 207 Score = 28.9 bits (63), Expect = 4.4 Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 2/50 (4%) Frame = -3 Query: 526 RLSHHQSHQVHHEDRHGNHPCR--HILACHPQNEVAPSGDHQVGQNRVGG 383 R+ +V H+ RH + H++ CH ++ GD G + VGG Sbjct: 57 RMRDEDDDEVWHQHRHQQQRRQRNHLVGCHTGHDDDDDGDDDSGSSGVGG 106
>AK072188:Os09g0537100 | Length = 117 Score = 28.9 bits (63), Expect = 4.4 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 11/44 (25%) Frame = +2 Query: 260 PSRGSITIGTSPTMA-----------LSSCATSSTCRLRLCLPR 358 P S T+ TSP+ A LSSC TS+ RLRL P+ Sbjct: 70 PLPASSTLSTSPSTARSAPLLPRLHRLSSCRTSTMTRLRLSTPK 113
>AK073733:Os01g0938600 | Length = 513 Score = 28.5 bits (62), Expect = 5.7 Identities = 9/20 (45%), Positives = 10/20 (50%) Frame = -3 Query: 517 HHQSHQVHHEDRHGNHPCRH 458 HH H HH HG+ RH Sbjct: 349 HHHGHHHHHHHHHGHEDSRH 368
>Os05g0241900:Os05g0241900 | Length = 1475 Score = 28.5 bits (62), Expect = 5.8 Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 7/78 (8%) Frame = +1 Query: 82 PTMIISKKNRNEICKYLFQE--GVLYAKKDYNLAKHPQIDVPNLQVIKLMQSFKSKEYVR 255 P +II+ ++R LFQE + K ++ A HPQ+D +V + ++S+ + Sbjct: 1187 PMVIITDRDRI-FTSSLFQEIFKAMKVKLRFSTAYHPQMDGQTERVNQCLESYLRNMTFQ 1245 Query: 256 ETFSWQHY-----YWYLT 294 E W + +WY T Sbjct: 1246 EPHKWYSWLALAEWWYNT 1263
>AK112117:Os08g0151300 | Length = 359 Score = 28.1 bits (61), Expect = 7.5 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = -3 Query: 535 QELRLSHHQSHQVHHEDRHGNH 470 ++ +L HH HQ HHE H NH Sbjct: 297 EQRQLGHHH-HQHHHEHEHENH 317
>AK111808:Os08g0151300 | Length = 359 Score = 28.1 bits (61), Expect = 7.5 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = -3 Query: 535 QELRLSHHQSHQVHHEDRHGNH 470 ++ +L HH HQ HHE H NH Sbjct: 297 EQRQLGHHH-HQHHHEHEHENH 317
>AK101154:Os11g0163500 | Length = 483 Score = 28.1 bits (61), Expect = 7.5 Identities = 14/45 (31%), Positives = 19/45 (42%) Frame = -3 Query: 535 QELRLSHHQSHQVHHEDRHGNHPCRHILACHPQNEVAPSGDHQVG 401 Q +++HH H HH HG+ H NE A G + G Sbjct: 116 QHGKIAHHHHHHRHHSKNHGSDEEE-----HDMNEDAADGKDKKG 155
>AK109979: | Length = 934 Score = 27.7 bits (60), Expect = 9.8 Identities = 13/40 (32%), Positives = 18/40 (45%) Frame = -3 Query: 535 QELRLSHHQSHQVHHEDRHGNHPCRHILACHPQNEVAPSG 416 Q+ + HQ H H + NHP +H PQ V +G Sbjct: 83 QQQQQQQHQQHLAQHHQQQPNHPHQH----QPQPSVVYAG 118
>AK101994:Os11g0598800 | Length = 952 Score = 27.7 bits (60), Expect = 9.8 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = +1 Query: 100 KKNRNEICKYLFQEGVLYAKKDYNLAK 180 KKN E+C Y ++E +L A KD+ AK Sbjct: 477 KKNLLEVCTYDYREIILPAMKDFLWAK 503 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 18,052,655 Number of extensions: 360086 Number of successful extensions: 1155 Number of sequences better than 10.0: 15 Number of HSP's gapped: 1130 Number of HSP's successfully gapped: 15 Length of query: 270 Length of database: 15,399,855 Length adjustment: 99 Effective length of query: 171 Effective length of database: 11,435,796 Effective search space: 1955521116 Effective search space used: 1955521116 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
