ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf33j01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001059351.1| Oryza sativa (japonica cultivar-group) Os04g0430100 (Os04g0430100) mRNA, complete cds Length = 899 Score = 603 bits (304), Expect = e-169 Identities = 439/484 (90%) Strand = Plus / Plus Query: 80 cgcccaccatgatcatctccaagaagaaccgcaatgagatttgcaagtacctcttccaag 139 ||||| ||||||||||| | |||||||||||||||||||| ||||||||||||||||||| Sbjct: 85 cgcccgccatgatcatcccgaagaagaaccgcaatgagatctgcaagtacctcttccaag 144 Query: 140 agggggtgctgtatgccaagaaggactacaacctggcgaagcacccgcagattgatgtgc 199 |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 145 agggagtgctgtatgccaagaaggactacaacctggcgaagcacccgcagatcgatgtgc 204 Query: 200 cgaacctccaggtgatcaagctcatgcagagcttcaagtctaaggaatacgtcagggaga 259 ||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 205 cgaacctgcaggtgatcaagctcatgcagagcttcaagtccaaggagtacgtcagggaga 264 Query: 260 ccttctcgtggcagcattactattggtacctcaccaacgatggcattgagttcctgcgca 319 ||||||| |||||| | ||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 265 ccttctcctggcagtactactactggtacctcaccaacgatggcattgagcacctgcgca 324 Query: 320 acttcctcaacctgccgtctgagattgtgcctgccacgctcaaaaaatctgccaggcctc 379 ||| ||| |||||||| |||||||||||||||||||| ||||| || ||||||||||| | Sbjct: 325 actaccttaacctgccatctgagattgtgcctgccacactcaagaagtctgccaggccac 384 Query: 380 ctggccgcccactcggttctggcccacctggtgatcgcccgagggggccacctcgttttg 439 ||||||||||| | ||||||||||||||||| || ||||| ||||| || ||||| |||| Sbjct: 385 ctggccgcccatttggttctggcccacctggcgaccgcccaaggggcccgcctcgctttg 444 Query: 440 agggtgacaggccaagatatggcgacagggatggttaccgtggcggtcctcgtggtgcac 499 | || ||||||||||| | ||| ||||| ||||| |||||||| |||||||||||||| | Sbjct: 445 aaggggacaggccaaggtttggtgacagagatgggtaccgtggtggtcctcgtggtgctc 504 Query: 500 ctggtgactttggtggtgagaaaggcggagctcctgcagacttccagccatcattcagga 559 |||||||||||||||||||||| || ||||||||||| || ||||||||||| || |||| Sbjct: 505 ctggtgactttggtggtgagaagggtggagctcctgctgagttccagccatcctttagga 564 Query: 560 gctc 563 |||| Sbjct: 565 gctc 568 Score = 52.0 bits (26), Expect = 0.003 Identities = 36/38 (94%), Gaps = 1/38 (2%) Strand = Plus / Plus Query: 649 atggagtgaacttcctcgtagtttggatgtgatgtttt 686 ||||||||||||||| |||||||||||| ||||||||| Sbjct: 636 atggagtgaacttcc-cgtagtttggatatgatgtttt 672 Score = 48.1 bits (24), Expect = 0.049 Identities = 24/24 (100%) Strand = Plus / Plus Query: 14 tttctccctcgcgccgccgcctcc 37 |||||||||||||||||||||||| Sbjct: 3 tttctccctcgcgccgccgcctcc 26
>dbj|AK102190.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087A06, full insert sequence Length = 902 Score = 595 bits (300), Expect = e-166 Identities = 438/484 (90%) Strand = Plus / Plus Query: 80 cgcccaccatgatcatctccaagaagaaccgcaatgagatttgcaagtacctcttccaag 139 ||||| ||||||||||| | |||||||||||||||||||| ||||||||||||||||||| Sbjct: 86 cgcccgccatgatcatcccgaagaagaaccgcaatgagatctgcaagtacctcttccaag 145 Query: 140 agggggtgctgtatgccaagaaggactacaacctggcgaagcacccgcagattgatgtgc 199 |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 146 agggagtgctgtatgccaagaaggactacaacctggcgaagcacccgcagatcgatgtgc 205 Query: 200 cgaacctccaggtgatcaagctcatgcagagcttcaagtctaaggaatacgtcagggaga 259 ||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 206 cgaacctgcaggtgatcaagctcatgcagagcttcaagtccaaggagtacgtcagggaga 265 Query: 260 ccttctcgtggcagcattactattggtacctcaccaacgatggcattgagttcctgcgca 319 ||||||| |||||| | ||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 266 ccttctcctggcagtactactactggtacctcaccaacgatggcattgagcacctgcgca 325 Query: 320 acttcctcaacctgccgtctgagattgtgcctgccacgctcaaaaaatctgccaggcctc 379 ||| ||| |||||||| |||||||||||||||||||| ||| | || ||||||||||| | Sbjct: 326 actaccttaacctgccatctgagattgtgcctgccacactcgagaagtctgccaggccac 385 Query: 380 ctggccgcccactcggttctggcccacctggtgatcgcccgagggggccacctcgttttg 439 ||||||||||| | ||||||||||||||||| || ||||| ||||| || ||||| |||| Sbjct: 386 ctggccgcccatttggttctggcccacctggcgaccgcccaaggggcccgcctcgctttg 445 Query: 440 agggtgacaggccaagatatggcgacagggatggttaccgtggcggtcctcgtggtgcac 499 | || ||||||||||| | ||| ||||| ||||| |||||||| |||||||||||||| | Sbjct: 446 aaggggacaggccaaggtttggtgacagagatgggtaccgtggtggtcctcgtggtgctc 505 Query: 500 ctggtgactttggtggtgagaaaggcggagctcctgcagacttccagccatcattcagga 559 |||||||||||||||||||||| || ||||||||||| || ||||||||||| || |||| Sbjct: 506 ctggtgactttggtggtgagaagggtggagctcctgctgagttccagccatcctttagga 565 Query: 560 gctc 563 |||| Sbjct: 566 gctc 569 Score = 52.0 bits (26), Expect = 0.003 Identities = 36/38 (94%), Gaps = 1/38 (2%) Strand = Plus / Plus Query: 649 atggagtgaacttcctcgtagtttggatgtgatgtttt 686 ||||||||||||||| |||||||||||| ||||||||| Sbjct: 637 atggagtgaacttcc-cgtagtttggatatgatgtttt 673 Score = 48.1 bits (24), Expect = 0.049 Identities = 24/24 (100%) Strand = Plus / Plus Query: 14 tttctccctcgcgccgccgcctcc 37 |||||||||||||||||||||||| Sbjct: 4 tttctccctcgcgccgccgcctcc 27
>dbj|AB054123.1| Oryza sativa (japonica cultivar-group) mRNA for ribosomal protein S10, complete cds Length = 756 Score = 563 bits (284), Expect = e-157 Identities = 434/484 (89%) Strand = Plus / Plus Query: 80 cgcccaccatgatcatctccaagaagaaccgcaatgagatttgcaagtacctcttccaag 139 ||||| ||||||||||| | |||||||||||||||||||| ||||||||||||||||||| Sbjct: 84 cgcccgccatgatcatcccgaagaagaaccgcaatgagatctgcaagtacctcttccaag 143 Query: 140 agggggtgctgtatgccaagaaggactacaacctggcgaagcacccgcagattgatgtgc 199 |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 144 agggagtgctgtatgccaagaaggactacaacctggcgaagcacccgcagatcgatgtgc 203 Query: 200 cgaacctccaggtgatcaagctcatgcagagcttcaagtctaaggaatacgtcagggaga 259 ||||||| |||||||||||| ||||||||||||||||||| ||||| ||||||||||||| Sbjct: 204 cgaacctgcaggtgatcaagttcatgcagagcttcaagtccaaggagtacgtcagggaga 263 Query: 260 ccttctcgtggcagcattactattggtacctcaccaacgatggcattgagttcctgcgca 319 ||||||| |||||| | ||||| ||||||||||||||||||||||||||| ||||| || Sbjct: 264 ccttctcctggcagtactactactggtacctcaccaacgatggcattgagcacctgctca 323 Query: 320 acttcctcaacctgccgtctgagattgtgcctgccacgctcaaaaaatctgccaggcctc 379 ||| ||| |||||||| |||||||||||||||||||| ||||| || ||||||||||| | Sbjct: 324 actaccttaacctgccatctgagattgtgcctgccacactcaagaagtctgccaggccac 383 Query: 380 ctggccgcccactcggttctggcccacctggtgatcgcccgagggggccacctcgttttg 439 |||| |||||| | ||||||||||||||||| || || || ||||| || ||||| |||| Sbjct: 384 ctggtcgcccatttggttctggcccacctggcgaccgtccaaggggcccgcctcgctttg 443 Query: 440 agggtgacaggccaagatatggcgacagggatggttaccgtggcggtcctcgtggtgcac 499 | || ||||||||||| | ||| ||||| ||||| |||||||| |||||||||||||| | Sbjct: 444 aaggggacaggccaaggtttggtgacagagatgggtaccgtggtggtcctcgtggtgctc 503 Query: 500 ctggtgactttggtggtgagaaaggcggagctcctgcagacttccagccatcattcagga 559 |||||||||||||||||||||| || ||||||||||| || ||||| ||||| || |||| Sbjct: 504 ctggtgactttggtggtgagaagggtggagctcctgctgagttccaaccatcctttagga 563 Query: 560 gctc 563 |||| Sbjct: 564 gctc 567 Score = 48.1 bits (24), Expect = 0.049 Identities = 24/24 (100%) Strand = Plus / Plus Query: 14 tttctccctcgcgccgccgcctcc 37 |||||||||||||||||||||||| Sbjct: 2 tttctccctcgcgccgccgcctcc 25
>gb|DQ245522.1| Zea mays clone 16675 mRNA sequence Length = 765 Score = 539 bits (272), Expect = e-150 Identities = 431/484 (89%) Strand = Plus / Plus Query: 77 cgccgcccaccatgatcatctccaagaagaaccgcaatgagatttgcaagtacctcttcc 136 |||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||| Sbjct: 67 cgccgctcaccatgatcatccccaagaagaaccgcaatgagatctgcaagtacctcttca 126 Query: 137 aagagggggtgctgtatgccaagaaggactacaacctggcgaagcacccgcagattgatg 196 | ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 127 aggagggcgtgctgtatgccaagaaggactacaacctggcgaagcacccgcagatcgatg 186 Query: 197 tgccgaacctccaggtgatcaagctcatgcagagcttcaagtctaaggaatacgtcaggg 256 |||| |||||||||||||||||||||||||||||||| ||||| ||||| || || |||| Sbjct: 187 tgcccaacctccaggtgatcaagctcatgcagagctttaagtccaaggagtatgttaggg 246 Query: 257 agaccttctcgtggcagcattactattggtacctcaccaacgatggcattgagttcctgc 316 |||||||||| |||||| | ||||| ||||| ||||||||||||||||||||| ||| | Sbjct: 247 agaccttctcctggcagtactactactggtatctcaccaacgatggcattgagcacctac 306 Query: 317 gcaacttcctcaacctgccgtctgagattgtgcctgccacgctcaaaaaatctgccaggc 376 |||||| ||| ||||| ||||||||||| ||||||||||||||||| || ||||||| || Sbjct: 307 gcaactacctgaacctcccgtctgagatcgtgcctgccacgctcaagaagtctgccaagc 366 Query: 377 ctcctggccgcccactcggttctggcccacctggtgatcgcccgagggggccacctcgtt 436 | |||||||||||| | || |||||||| |||||||| ||||| ||||| ||| ||||| Sbjct: 367 cacctggccgcccatttggctctggccctcctggtgaccgcccaaggggcccaggtcgtt 426 Query: 437 ttgagggtgacaggccaagatatggcgacagggatggttaccgtggcggtcctcgtggtg 496 |||| || ||||||||||| | ||| ||||||||||| |||||||| ||||||||||||| Sbjct: 427 ttgacggcgacaggccaaggtttggtgacagggatgggtaccgtggtggtcctcgtggtg 486 Query: 497 cacctggtgactttggtggtgagaaaggcggagctcctgcagacttccagccatcattca 556 | ||||||||||||||||| || || | ||||||||||| || |||||||||||||||| Sbjct: 487 ctcctggtgactttggtggcgataagagtggagctcctgctgagttccagccatcattca 546 Query: 557 ggag 560 |||| Sbjct: 547 ggag 550
>gb|AY103548.1| Zea mays PCO091529 mRNA sequence Length = 1541 Score = 531 bits (268), Expect = e-147 Identities = 427/480 (88%) Strand = Plus / Plus Query: 81 gcccaccatgatcatctccaagaagaaccgcaatgagatttgcaagtacctcttccaaga 140 |||||||||||||||| |||||||||||||||||||||| ||||||||||||||| | || Sbjct: 240 gcccaccatgatcatccccaagaagaaccgcaatgagatctgcaagtacctcttcaagga 299 Query: 141 gggggtgctgtatgccaagaaggactacaacctggcgaagcacccgcagattgatgtgcc 200 ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 300 gggcgtgctgtatgccaagaaggactacaacctggcgaagcacccgcagatcgatgtgcc 359 Query: 201 gaacctccaggtgatcaagctcatgcagagcttcaagtctaaggaatacgtcagggagac 260 |||||||||||||||||||||||||||||||| ||||| ||||| || || |||||||| Sbjct: 360 caacctccaggtgatcaagctcatgcagagctttaagtccaaggagtatgttagggagac 419 Query: 261 cttctcgtggcagcattactattggtacctcaccaacgatggcattgagttcctgcgcaa 320 |||||| |||||| | ||||| ||||| ||||||||||||||||||||| ||| ||||| Sbjct: 420 cttctcctggcagtactactactggtatctcaccaacgatggcattgagcacctacgcaa 479 Query: 321 cttcctcaacctgccgtctgagattgtgcctgccacgctcaaaaaatctgccaggcctcc 380 || ||| ||||| ||||||||||| ||||||||||||||||| || ||||||| ||| || Sbjct: 480 ctacctgaacctcccgtctgagatcgtgcctgccacgctcaagaagtctgccaagccacc 539 Query: 381 tggccgcccactcggttctggcccacctggtgatcgcccgagggggccacctcgttttga 440 |||||||||| | || |||||||| |||||||| ||||| ||||| ||| ||||||||| Sbjct: 540 tggccgcccatttggctctggccctcctggtgaccgcccaaggggcccaggtcgttttga 599 Query: 441 gggtgacaggccaagatatggcgacagggatggttaccgtggcggtcctcgtggtgcacc 500 || ||||||||||| | ||| |||||||||| |||||||| |||||||||||||| || Sbjct: 600 cggcgacaggccaaggtttggtgacagggatgagtaccgtggtggtcctcgtggtgctcc 659 Query: 501 tggtgactttggtggtgagaaaggcggagctcctgcagacttccagccatcattcaggag 560 ||||||||||||||| || || | ||||||||||| || |||||||||||||||||||| Sbjct: 660 tggtgactttggtggcgataagagtggagctcctgctgagttccagccatcattcaggag 719 Score = 250 bits (126), Expect = 7e-63 Identities = 156/166 (93%) Strand = Plus / Plus Query: 144 ggtgctgtatgccaagaaggactacaacctggcgaagcacccgcagattgatgtgccgaa 203 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 16 ggtgctgtatgccaagaaggactacaacctggcgaagcacccacagattgatgtgcccaa 75 Query: 204 cctccaggtgatcaagctcatgcagagcttcaagtctaaggaatacgtcagggagacctt 263 |||||||||||||||||||||||||||||||||||| ||||| || ||||| |||||||| Sbjct: 76 cctccaggtgatcaagctcatgcagagcttcaagtccaaggagtatgtcagagagacctt 135 Query: 264 ctcgtggcagcattactattggtacctcaccaacgatggcattgag 309 ||| |||||| | ||||| ||||||||||||||||||||||||||| Sbjct: 136 ctcctggcagtactactactggtacctcaccaacgatggcattgag 181
>gb|BT019280.1| Zea mays clone Contig953.F mRNA sequence Length = 872 Score = 480 bits (242), Expect = e-132 Identities = 421/480 (87%), Gaps = 3/480 (0%) Strand = Plus / Minus Query: 81 gcccaccatgatcatctccaagaagaaccgcaatgagatttgcaagtacctcttccaaga 140 |||||||||||||||| |||||||||||||||||||||| ||||||||||||||| | || Sbjct: 799 gcccaccatgatcatccccaagaagaaccgcaatgagatctgcaagtacctcttcaagga 740 Query: 141 gggggtgctgtatgccaagaaggactacaacctggcgaagcacccgcagattgatgtgcc 200 ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 739 gggcgtgctgtatgccaagaaggactacaacctggcgaagcacccacagattgatgtgcc 680 Query: 201 gaacctccaggtgatcaagctcatgcagagcttcaagtctaaggaatacgtcagggagac 260 |||||||||||||||||||||||||||||||||||||| ||||| || ||||| ||||| Sbjct: 679 caacctccaggtgatcaagctcatgcagagcttcaagtccaaggagtatgtcagagagac 620 Query: 261 cttctcgtggcagcattactattggtacctcaccaacgatggcattgagttcctgcgcaa 320 |||||| |||||| | ||||| ||||||||||||||||||||||||||| ||| ||||| Sbjct: 619 cttctcctggcagtactactactggtacctcaccaacgatggcattgagcacctacgcaa 560 Query: 321 cttcctcaacctgccgtctgagattgtgcctgccacgctcaaaaaatctgccaggcctcc 380 || ||| ||||| ||||||||||| ||||||||||||||||| || ||||||||||| | Sbjct: 559 ctacctgaacctcccgtctgagatcgtgcctgccacgctcaagaagtctgccaggccact 500 Query: 381 tggccgcccactcggttctggcccacctggtgatcgcccgagggggccacctcgttttga 440 ||||| ||| | || |||||||| |||||||| ||||| ||||| || ||||||||| Sbjct: 499 gggccgtccatttggctctggccctcctggtgaccgcccaaggggccctggtcgttttga 440 Query: 441 gggtgacaggccaagatatggcgacagggatggttaccgtggcggtcctcgtggtgcacc 500 ||||| ||||| | ||| |||||||||| |||||||| |||||||||||||| || Sbjct: 439 ---agacagaccaaggtttggagacagggatgagtaccgtggtggtcctcgtggtgctcc 383 Query: 501 tggtgactttggtggtgagaaaggcggagctcctgcagacttccagccatcattcaggag 560 ||||||||| ||||| || || | ||||||||||| || ||||||||||| |||||||| Sbjct: 382 tggtgacttcggtggcgataagagtggagctcctgctgagttccagccatctttcaggag 323
>ref|NM_001053623.1| Oryza sativa (japonica cultivar-group) Os02g0549600 (Os02g0549600) mRNA, complete cds Length = 852 Score = 442 bits (223), Expect = e-121 Identities = 412/475 (86%) Strand = Plus / Plus Query: 86 ccatgatcatctccaagaagaaccgcaatgagatttgcaagtacctcttccaagaggggg 145 ||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 78 ccatgatcatccccaagaagaaccggaatgagatctgcaagtacctcttccaagaggggg 137 Query: 146 tgctgtatgccaagaaggactacaacctggcgaagcacccgcagattgatgtgccgaacc 205 | |||| ||||||||||||||||| |||| || ||||| |||||||||||||| |||| Sbjct: 138 ttttgtacgccaagaaggactacaatttggcaaaacacccacagattgatgtgccaaacc 197 Query: 206 tccaggtgatcaagctcatgcagagcttcaagtctaaggaatacgtcagggagaccttct 265 | ||||| |||||||||||||||||||||||||| ||||| || |||||||||||||||| Sbjct: 198 ttcaggtcatcaagctcatgcagagcttcaagtccaaggagtatgtcagggagaccttct 257 Query: 266 cgtggcagcattactattggtacctcaccaacgatggcattgagttcctgcgcaacttcc 325 | |||||| | ||||| ||||||||||| || |||||||||||| |||| | || | || Sbjct: 258 cctggcagtactactactggtacctcactaatgatggcattgagcacctgaggaattacc 317 Query: 326 tcaacctgccgtctgagattgtgcctgccacgctcaaaaaatctgccaggcctcctggcc 385 | ||| |||||||||||||||| ||||| || ||||| || ||||| ||||| || |||| Sbjct: 318 ttaacttgccgtctgagattgtacctgctacactcaagaagtctgcaaggccaccaggcc 377 Query: 386 gcccactcggttctggcccacctggtgatcgcccgagggggccacctcgttttgagggtg 445 ||||| | || |||||||| |||||||||||||| ||||| |||||||| || || || | Sbjct: 378 gcccatttggctctggcccccctggtgatcgcccaaggggcccacctcggttcgaagggg 437 Query: 446 acaggccaagatatggcgacagggatggttaccgtggcggtcctcgtggtgcacctggtg 505 |||| ||||| | ||| ||| ||||||| |||||||| || ||||||||||| ||||||| Sbjct: 438 acagaccaaggtttggagaccgggatggctaccgtggtggacctcgtggtgcgcctggtg 497 Query: 506 actttggtggtgagaaaggcggagctcctgcagacttccagccatcattcaggag 560 | |||||||||||||| || || ||||||||||| |||||||||||||||||||| Sbjct: 498 attttggtggtgagaagggtggtgctcctgcagaattccagccatcattcaggag 552
>dbj|AK066564.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073I17, full insert sequence Length = 853 Score = 442 bits (223), Expect = e-121 Identities = 412/475 (86%) Strand = Plus / Plus Query: 86 ccatgatcatctccaagaagaaccgcaatgagatttgcaagtacctcttccaagaggggg 145 ||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 79 ccatgatcatccccaagaagaaccggaatgagatctgcaagtacctcttccaagaggggg 138 Query: 146 tgctgtatgccaagaaggactacaacctggcgaagcacccgcagattgatgtgccgaacc 205 | |||| ||||||||||||||||| |||| || ||||| |||||||||||||| |||| Sbjct: 139 ttttgtacgccaagaaggactacaatttggcaaaacacccacagattgatgtgccaaacc 198 Query: 206 tccaggtgatcaagctcatgcagagcttcaagtctaaggaatacgtcagggagaccttct 265 | ||||| |||||||||||||||||||||||||| ||||| || |||||||||||||||| Sbjct: 199 ttcaggtcatcaagctcatgcagagcttcaagtccaaggagtatgtcagggagaccttct 258 Query: 266 cgtggcagcattactattggtacctcaccaacgatggcattgagttcctgcgcaacttcc 325 | |||||| | ||||| ||||||||||| || |||||||||||| |||| | || | || Sbjct: 259 cctggcagtactactactggtacctcactaatgatggcattgagcacctgaggaattacc 318 Query: 326 tcaacctgccgtctgagattgtgcctgccacgctcaaaaaatctgccaggcctcctggcc 385 | ||| |||||||||||||||| ||||| || ||||| || ||||| ||||| || |||| Sbjct: 319 ttaacttgccgtctgagattgtacctgctacactcaagaagtctgcaaggccaccaggcc 378 Query: 386 gcccactcggttctggcccacctggtgatcgcccgagggggccacctcgttttgagggtg 445 ||||| | || |||||||| |||||||||||||| ||||| |||||||| || || || | Sbjct: 379 gcccatttggctctggcccccctggtgatcgcccaaggggcccacctcggttcgaagggg 438 Query: 446 acaggccaagatatggcgacagggatggttaccgtggcggtcctcgtggtgcacctggtg 505 |||| ||||| | ||| ||| ||||||| |||||||| || ||||||||||| ||||||| Sbjct: 439 acagaccaaggtttggagaccgggatggctaccgtggtggacctcgtggtgcgcctggtg 498 Query: 506 actttggtggtgagaaaggcggagctcctgcagacttccagccatcattcaggag 560 | |||||||||||||| || || ||||||||||| |||||||||||||||||||| Sbjct: 499 attttggtggtgagaagggtggtgctcctgcagaattccagccatcattcaggag 553
>emb|CR855094.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0222C05, complete sequence Length = 37743 Score = 385 bits (194), Expect = e-103 Identities = 260/282 (92%) Strand = Plus / Plus Query: 138 agagggggtgctgtatgccaagaaggactacaacctggcgaagcacccgcagattgatgt 197 |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 23445 agagggagtgctgtatgccaagaaggactacaacctggcgaagcacccgcagatcgatgt 23504 Query: 198 gccgaacctccaggtgatcaagctcatgcagagcttcaagtctaaggaatacgtcaggga 257 ||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 23505 gccgaacctgcaggtgatcaagctcatgcagagcttcaagtccaaggagtacgtcaggga 23564 Query: 258 gaccttctcgtggcagcattactattggtacctcaccaacgatggcattgagttcctgcg 317 ||||||||| |||||| | ||||| ||||||||||||||||||||||||||| |||||| Sbjct: 23565 gaccttctcctggcagtactactactggtacctcaccaacgatggcattgagcacctgcg 23624 Query: 318 caacttcctcaacctgccgtctgagattgtgcctgccacgctcaaaaaatctgccaggcc 377 ||||| ||| |||||||| |||||||||||||||||||| ||||| || ||||||||||| Sbjct: 23625 caactacctaaacctgccatctgagattgtgcctgccacactcaagaagtctgccaggcc 23684 Query: 378 tcctggccgcccactcggttctggcccacctggtgatcgccc 419 |||||||||||| | ||||||||||||||||| || ||||| Sbjct: 23685 acctggccgcccatttggttctggcccacctggcgaccgccc 23726 Score = 133 bits (67), Expect = 1e-27 Identities = 115/131 (87%) Strand = Plus / Plus Query: 421 agggggccacctcgttttgagggtgacaggccaagatatggcgacagggatggttaccgt 480 ||||| || ||||| ||||| || ||||||||||| | ||| ||||| ||||| |||||| Sbjct: 24309 aggggcccgcctcgctttgaaggggacaggccaaggtttggtgacagagatgggtaccgt 24368 Query: 481 ggcggtcctcgtggtgcacctggtgactttggtggtgagaaaggcggagctcctgcagac 540 || |||||||||||||| ||||||||||||||||||||||| || ||||||||||| || Sbjct: 24369 ggtggtcctcgtggtgctcctggtgactttggtggtgagaagggtggagctcctgctgag 24428 Query: 541 ttccagccatc 551 ||||||||||| Sbjct: 24429 ttccagccatc 24439 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 90 gatcatctccaagaagaaccgcaatgagatttgcaagtacctcttccaag 139 ||||||| | |||||||||||||||||||| ||||||||||||||||||| Sbjct: 22952 gatcatcccgaagaagaaccgcaatgagatctgcaagtacctcttccaag 23001 Score = 56.0 bits (28), Expect = 2e-04 Identities = 35/36 (97%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 3 agggttcttcg-tttctccctcgcgccgccgcctcc 37 ||||||||||| |||||||||||||||||||||||| Sbjct: 22731 agggttcttcgatttctccctcgcgccgccgcctcc 22766 Score = 52.0 bits (26), Expect = 0.003 Identities = 36/38 (94%), Gaps = 1/38 (2%) Strand = Plus / Plus Query: 649 atggagtgaacttcctcgtagtttggatgtgatgtttt 686 ||||||||||||||| |||||||||||| ||||||||| Sbjct: 25020 atggagtgaacttcc-cgtagtttggatatgatgtttt 25056
>emb|AL606632.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042L16, complete sequence Length = 163738 Score = 385 bits (194), Expect = e-103 Identities = 260/282 (92%) Strand = Plus / Plus Query: 138 agagggggtgctgtatgccaagaaggactacaacctggcgaagcacccgcagattgatgt 197 |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 152160 agagggagtgctgtatgccaagaaggactacaacctggcgaagcacccgcagatcgatgt 152219 Query: 198 gccgaacctccaggtgatcaagctcatgcagagcttcaagtctaaggaatacgtcaggga 257 ||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 152220 gccgaacctgcaggtgatcaagctcatgcagagcttcaagtccaaggagtacgtcaggga 152279 Query: 258 gaccttctcgtggcagcattactattggtacctcaccaacgatggcattgagttcctgcg 317 ||||||||| |||||| | ||||| ||||||||||||||||||||||||||| |||||| Sbjct: 152280 gaccttctcctggcagtactactactggtacctcaccaacgatggcattgagcacctgcg 152339 Query: 318 caacttcctcaacctgccgtctgagattgtgcctgccacgctcaaaaaatctgccaggcc 377 ||||| ||| |||||||| |||||||||||||||||||| ||||| || ||||||||||| Sbjct: 152340 caactaccttaacctgccatctgagattgtgcctgccacactcaagaagtctgccaggcc 152399 Query: 378 tcctggccgcccactcggttctggcccacctggtgatcgccc 419 |||||||||||| | ||||||||||||||||| || ||||| Sbjct: 152400 acctggccgcccatttggttctggcccacctggcgaccgccc 152441 Score = 133 bits (67), Expect = 1e-27 Identities = 115/131 (87%) Strand = Plus / Plus Query: 421 agggggccacctcgttttgagggtgacaggccaagatatggcgacagggatggttaccgt 480 ||||| || ||||| ||||| || ||||||||||| | ||| ||||| ||||| |||||| Sbjct: 153042 aggggcccgcctcgctttgaaggggacaggccaaggtttggtgacagagatgggtaccgt 153101 Query: 481 ggcggtcctcgtggtgcacctggtgactttggtggtgagaaaggcggagctcctgcagac 540 || |||||||||||||| ||||||||||||||||||||||| || ||||||||||| || Sbjct: 153102 ggtggtcctcgtggtgctcctggtgactttggtggtgagaagggtggagctcctgctgag 153161 Query: 541 ttccagccatc 551 ||||||||||| Sbjct: 153162 ttccagccatc 153172 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 90 gatcatctccaagaagaaccgcaatgagatttgcaagtacctcttccaag 139 ||||||| | |||||||||||||||||||| ||||||||||||||||||| Sbjct: 151665 gatcatcccgaagaagaaccgcaatgagatctgcaagtacctcttccaag 151714 Score = 56.0 bits (28), Expect = 2e-04 Identities = 35/36 (97%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 3 agggttcttcg-tttctccctcgcgccgccgcctcc 37 ||||||||||| |||||||||||||||||||||||| Sbjct: 151444 agggttcttcgatttctccctcgcgccgccgcctcc 151479 Score = 52.0 bits (26), Expect = 0.003 Identities = 36/38 (94%), Gaps = 1/38 (2%) Strand = Plus / Plus Query: 649 atggagtgaacttcctcgtagtttggatgtgatgtttt 686 ||||||||||||||| |||||||||||| ||||||||| Sbjct: 153753 atggagtgaacttcc-cgtagtttggatatgatgtttt 153789
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 385 bits (194), Expect = e-103 Identities = 260/282 (92%) Strand = Plus / Plus Query: 138 agagggggtgctgtatgccaagaaggactacaacctggcgaagcacccgcagattgatgt 197 |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 21338686 agagggagtgctgtatgccaagaaggactacaacctggcgaagcacccgcagatcgatgt 21338745 Query: 198 gccgaacctccaggtgatcaagctcatgcagagcttcaagtctaaggaatacgtcaggga 257 ||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 21338746 gccgaacctgcaggtgatcaagctcatgcagagcttcaagtccaaggagtacgtcaggga 21338805 Query: 258 gaccttctcgtggcagcattactattggtacctcaccaacgatggcattgagttcctgcg 317 ||||||||| |||||| | ||||| ||||||||||||||||||||||||||| |||||| Sbjct: 21338806 gaccttctcctggcagtactactactggtacctcaccaacgatggcattgagcacctgcg 21338865 Query: 318 caacttcctcaacctgccgtctgagattgtgcctgccacgctcaaaaaatctgccaggcc 377 ||||| ||| |||||||| |||||||||||||||||||| ||||| || ||||||||||| Sbjct: 21338866 caactaccttaacctgccatctgagattgtgcctgccacactcaagaagtctgccaggcc 21338925 Query: 378 tcctggccgcccactcggttctggcccacctggtgatcgccc 419 |||||||||||| | ||||||||||||||||| || ||||| Sbjct: 21338926 acctggccgcccatttggttctggcccacctggcgaccgccc 21338967 Score = 133 bits (67), Expect = 1e-27 Identities = 115/131 (87%) Strand = Plus / Plus Query: 421 agggggccacctcgttttgagggtgacaggccaagatatggcgacagggatggttaccgt 480 ||||| || ||||| ||||| || ||||||||||| | ||| ||||| ||||| |||||| Sbjct: 21339568 aggggcccgcctcgctttgaaggggacaggccaaggtttggtgacagagatgggtaccgt 21339627 Query: 481 ggcggtcctcgtggtgcacctggtgactttggtggtgagaaaggcggagctcctgcagac 540 || |||||||||||||| ||||||||||||||||||||||| || ||||||||||| || Sbjct: 21339628 ggtggtcctcgtggtgctcctggtgactttggtggtgagaagggtggagctcctgctgag 21339687 Query: 541 ttccagccatc 551 ||||||||||| Sbjct: 21339688 ttccagccatc 21339698 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 90 gatcatctccaagaagaaccgcaatgagatttgcaagtacctcttccaag 139 ||||||| | |||||||||||||||||||| ||||||||||||||||||| Sbjct: 21338191 gatcatcccgaagaagaaccgcaatgagatctgcaagtacctcttccaag 21338240 Score = 56.0 bits (28), Expect = 2e-04 Identities = 35/36 (97%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 3 agggttcttcg-tttctccctcgcgccgccgcctcc 37 ||||||||||| |||||||||||||||||||||||| Sbjct: 21337970 agggttcttcgatttctccctcgcgccgccgcctcc 21338005 Score = 52.0 bits (26), Expect = 0.003 Identities = 36/38 (94%), Gaps = 1/38 (2%) Strand = Plus / Plus Query: 649 atggagtgaacttcctcgtagtttggatgtgatgtttt 686 ||||||||||||||| |||||||||||| ||||||||| Sbjct: 21340279 atggagtgaacttcc-cgtagtttggatatgatgtttt 21340315
>emb|CT831917.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA214H05, full insert sequence Length = 901 Score = 367 bits (185), Expect = 4e-98 Identities = 398/469 (84%) Strand = Plus / Plus Query: 83 ccaccatgatcatctccaagaagaaccgcaatgagatttgcaagtacctcttccaagagg 142 ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||| Sbjct: 85 ccaccatgatcatctccaagaagaaccgccgcgagatctgcaagtacctcttccatgagg 144 Query: 143 gggtgctgtatgccaagaaggactacaacctggcgaagcacccgcagattgatgtgccga 202 | || |||||||||||||||||||||||||||| |||||||| || |||||||||| | Sbjct: 145 gagtcttgtatgccaagaaggactacaacctggccaagcacccaaaggttgatgtgccca 204 Query: 203 acctccaggtgatcaagctcatgcagagcttcaagtctaaggaatacgtcagggagacct 262 || | ||||||| ||||||||||||||||||||||| ||||| || || |||||||||| Sbjct: 205 acttggaggtgattaagctcatgcagagcttcaagtcaaaggagtatgtgagggagacct 264 Query: 263 tctcgtggcagcattactattggtacctcaccaacgatggcattgagttcctgcgcaact 322 ||||||||||||| ||||| |||||||| ||||| |||||||||||| ||| |||| || Sbjct: 265 tctcgtggcagcactactactggtacctgaccaatgatggcattgagcacctccgcagct 324 Query: 323 tcctcaacctgccgtctgagattgtgcctgccacgctcaaaaaatctgccaggcctcctg 382 |||||||||||| |||||| |||||||| ||| ||||| || ||||||| ||| || Sbjct: 325 acctcaacctgccatctgaggttgtgcctaacaccctcaagaagtctgccaagcccccgt 384 Query: 383 gccgcccactcggttctggcccacctggtgatcgcccgagggggccacctcgttttgagg 442 |||||| |||| |||||||| |||||||| ||||| || || || ||||| ||||||| Sbjct: 385 ctcgcccattcggctctggccctcctggtgaccgccccagaggcccgcctcgctttgagg 444 Query: 443 gtgacaggccaagatatggcgacagggatggttaccgtggcggtcctcgtggtgcacctg 502 |||||||||| || | ||| ||||||||||||||| | || || || |||||||| || | Sbjct: 445 gtgacaggcccaggtttggtgacagggatggttacaggggtggcccacgtggtgctccag 504 Query: 503 gtgactttggtggtgagaaaggcggagctcctgcagacttccagccatc 551 |||| |||||||| ||||| || || ||||| || || ||||||||||| Sbjct: 505 gtgattttggtggcgagaagggtggtgctccagctgagttccagccatc 553
>ref|NM_001052015.1| Oryza sativa (japonica cultivar-group) Os01g0962600 (Os01g0962600) mRNA, complete cds Length = 899 Score = 367 bits (185), Expect = 4e-98 Identities = 398/469 (84%) Strand = Plus / Plus Query: 83 ccaccatgatcatctccaagaagaaccgcaatgagatttgcaagtacctcttccaagagg 142 ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||| Sbjct: 83 ccaccatgatcatctccaagaagaaccgccgcgagatctgcaagtacctcttccatgagg 142 Query: 143 gggtgctgtatgccaagaaggactacaacctggcgaagcacccgcagattgatgtgccga 202 | || |||||||||||||||||||||||||||| |||||||| || |||||||||| | Sbjct: 143 gagtcttgtatgccaagaaggactacaacctggccaagcacccaaaggttgatgtgccca 202 Query: 203 acctccaggtgatcaagctcatgcagagcttcaagtctaaggaatacgtcagggagacct 262 || | ||||||| ||||||||||||||||||||||| ||||| || || |||||||||| Sbjct: 203 acttggaggtgattaagctcatgcagagcttcaagtcaaaggagtatgtgagggagacct 262 Query: 263 tctcgtggcagcattactattggtacctcaccaacgatggcattgagttcctgcgcaact 322 ||||||||||||| ||||| |||||||| ||||| |||||||||||| ||| |||| || Sbjct: 263 tctcgtggcagcactactactggtacctgaccaatgatggcattgagcacctccgcagct 322 Query: 323 tcctcaacctgccgtctgagattgtgcctgccacgctcaaaaaatctgccaggcctcctg 382 |||||||||||| |||||| |||||||| ||| ||||| || ||||||| ||| || Sbjct: 323 acctcaacctgccatctgaggttgtgcctaacaccctcaagaagtctgccaagcccccgt 382 Query: 383 gccgcccactcggttctggcccacctggtgatcgcccgagggggccacctcgttttgagg 442 |||||| |||| |||||||| |||||||| ||||| || || || ||||| ||||||| Sbjct: 383 ctcgcccattcggctctggccctcctggtgaccgccccagaggcccgcctcgctttgagg 442 Query: 443 gtgacaggccaagatatggcgacagggatggttaccgtggcggtcctcgtggtgcacctg 502 |||||||||| || | ||| ||||||||||||||| | || || || |||||||| || | Sbjct: 443 gtgacaggcccaggtttggtgacagggatggttacaggggtggcccacgtggtgctccag 502 Query: 503 gtgactttggtggtgagaaaggcggagctcctgcagacttccagccatc 551 |||| |||||||| ||||| || || ||||| || || ||||||||||| Sbjct: 503 gtgattttggtggcgagaagggtggtgctccagctgagttccagccatc 551
>dbj|AK073846.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070I05, full insert sequence Length = 900 Score = 359 bits (181), Expect = 1e-95 Identities = 397/469 (84%) Strand = Plus / Plus Query: 83 ccaccatgatcatctccaagaagaaccgcaatgagatttgcaagtacctcttccaagagg 142 ||||||||||||||| ||||||||||||| ||||| ||||||||||||||||| |||| Sbjct: 84 ccaccatgatcatctgcaagaagaaccgccgcgagatctgcaagtacctcttccatgagg 143 Query: 143 gggtgctgtatgccaagaaggactacaacctggcgaagcacccgcagattgatgtgccga 202 | || |||||||||||||||||||||||||||| |||||||| || |||||||||| | Sbjct: 144 gagtcttgtatgccaagaaggactacaacctggccaagcacccaaaggttgatgtgccca 203 Query: 203 acctccaggtgatcaagctcatgcagagcttcaagtctaaggaatacgtcagggagacct 262 || | ||||||| ||||||||||||||||||||||| ||||| || || |||||||||| Sbjct: 204 acttggaggtgattaagctcatgcagagcttcaagtcaaaggagtatgtgagggagacct 263 Query: 263 tctcgtggcagcattactattggtacctcaccaacgatggcattgagttcctgcgcaact 322 ||||||||||||| ||||| |||||||| ||||| |||||||||||| ||| |||| || Sbjct: 264 tctcgtggcagcactactactggtacctgaccaatgatggcattgagcacctccgcagct 323 Query: 323 tcctcaacctgccgtctgagattgtgcctgccacgctcaaaaaatctgccaggcctcctg 382 |||||||||||| |||||| |||||||| ||| ||||| || ||||||| ||| || Sbjct: 324 acctcaacctgccatctgaggttgtgcctaacaccctcaagaagtctgccaagcccccgt 383 Query: 383 gccgcccactcggttctggcccacctggtgatcgcccgagggggccacctcgttttgagg 442 |||||| |||| |||||||| |||||||| ||||| || || || ||||| ||||||| Sbjct: 384 ctcgcccattcggctctggccctcctggtgaccgccccagaggcccgcctcgctttgagg 443 Query: 443 gtgacaggccaagatatggcgacagggatggttaccgtggcggtcctcgtggtgcacctg 502 |||||||||| || | ||| ||||||||||||||| | || || || |||||||| || | Sbjct: 444 gtgacaggcccaggtttggtgacagggatggttacaggggtggcccacgtggtgctccag 503 Query: 503 gtgactttggtggtgagaaaggcggagctcctgcagacttccagccatc 551 |||| |||||||| ||||| || || ||||| || || ||||||||||| Sbjct: 504 gtgattttggtggcgagaagggtggtgctccagctgagttccagccatc 552
>gb|DQ244752.1| Zea mays clone 10501 mRNA sequence Length = 808 Score = 341 bits (172), Expect = 2e-90 Identities = 394/468 (84%) Strand = Plus / Plus Query: 84 caccatgatcatctccaagaagaaccgcaatgagatttgcaagtacctcttccaagaggg 143 |||||||||||||||||||||||||||| ||||| ||||| ||||||||||| ||||| Sbjct: 93 caccatgatcatctccaagaagaaccgccgcgagatctgcaaatacctcttccatgaggg 152 Query: 144 ggtgctgtatgccaagaaggactacaacctggcgaagcacccgcagattgatgtgccgaa 203 ||| |||| ||||||||||||||||||||||| |||||||| || |||||||||| || Sbjct: 153 ggtcttgtacgccaagaaggactacaacctggccaagcaccccaagcttgatgtgcccaa 212 Query: 204 cctccaggtgatcaagctcatgcagagcttcaagtctaaggaatacgtcagggagacctt 263 | | ||||||| ||||||||||||||||||||||| ||||| || || ||||| ||||| Sbjct: 213 cttggaggtgattaagctcatgcagagcttcaagtcgaaggagtatgtgagggaaacctt 272 Query: 264 ctcgtggcagcattactattggtacctcaccaacgatggcattgagttcctgcgcaactt 323 ||| |||||| | ||||| ||||||||||||||||||||||||||| ||| |||| ||| Sbjct: 273 ctcatggcagtactactactggtacctcaccaacgatggcattgagcacctccgcagctt 332 Query: 324 cctcaacctgccgtctgagattgtgcctgccacgctcaaaaaatctgccaggcctcctgg 383 |||||||||||| || ||| |||||||| || ||||| || ||| ||| ||| || Sbjct: 333 cctcaacctgccatcagaggttgtgcctaataccctcaagaagtcttccaagcccccgtc 392 Query: 384 ccgcccactcggttctggcccacctggtgatcgcccgagggggccacctcgttttgaggg 443 ||||| |||| ||||||||||||||||| ||||| ||||| || ||||||| ||| || Sbjct: 393 tcgccccttcggctctggcccacctggtgaccgccccaggggccctcctcgttatgaagg 452 Query: 444 tgacaggccaagatatggcgacagggatggttaccgtggcggtcctcgtggtgcacctgg 503 ||||||||| || | ||| || |||||||||||| | || ||||| ||||| || || || Sbjct: 453 tgacaggcctaggtttggtgatagggatggttacagaggaggtccacgtggcgctccagg 512 Query: 504 tgactttggtggtgagaaaggcggagctcctgcagacttccagccatc 551 ||||||||||||||| || || || ||||||||||| ||||| ||||| Sbjct: 513 tgactttggtggtgataagggtggtgctcctgcagatttccaaccatc 560
>gb|BT016501.1| Zea mays clone Contig334 mRNA sequence Length = 841 Score = 291 bits (147), Expect = 2e-75 Identities = 237/267 (88%) Strand = Plus / Plus Query: 84 caccatgatcatctccaagaagaaccgcaatgagatttgcaagtacctcttccaagaggg 143 |||||||||||||||||||||||||||| ||||| ||||||||| ||||||| ||||| Sbjct: 60 caccatgatcatctccaagaagaaccgccgcgagatctgcaagtacatcttccatgaggg 119 Query: 144 ggtgctgtatgccaagaaggactacaacctggcgaagcacccgcagattgatgtgccgaa 203 ||| || |||||||||||||||||||||||||| |||||||| || |||| ||||| || Sbjct: 120 ggttctatatgccaagaaggactacaacctggccaagcaccccaagcttgacgtgcccaa 179 Query: 204 cctccaggtgatcaagctcatgcagagcttcaagtctaaggaatacgtcagggagacctt 263 ||| ||||||| ||||||||||||||||||||||| ||||| || |||||||||||||| Sbjct: 180 cctggaggtgattaagctcatgcagagcttcaagtccaaggagtatgtcagggagacctt 239 Query: 264 ctcgtggcagcattactattggtacctcaccaacgatggcattgagttcctgcgcaactt 323 ||| |||||| | ||||| ||||||||||||||||||||||||||| ||| |||| ||| Sbjct: 240 ctcctggcagtactactactggtacctcaccaacgatggcattgagcacctccgcagctt 299 Query: 324 cctcaacctgccgtctgagattgtgcc 350 ||||||||||||||| ||| ||||||| Sbjct: 300 cctcaacctgccgtcagaggttgtgcc 326 Score = 69.9 bits (35), Expect = 1e-08 Identities = 125/155 (80%) Strand = Plus / Plus Query: 397 tctggcccacctggtgatcgcccgagggggccacctcgttttgagggtgacaggccaaga 456 ||||||||||| ||||| ||||| ||||| || ||||| |||| || ||||| || || Sbjct: 373 tctggcccaccgggtgaccgccccaggggtccccctcgctttggggaagacagacctagg 432 Query: 457 tatggcgacagggatggttaccgtggcggtcctcgtggtgcacctggtgactttggtggt 516 | ||| || |||||||||||| | || ||||| || |||||| ||||| ||||||||| Sbjct: 433 tttggggatagggatggttacagaggaggtccacgaggtgcaatgggtgattttggtggt 492 Query: 517 gagaaaggcggagctcctgcagacttccagccatc 551 ||||| || | |||||||| || ||||||||||| Sbjct: 493 gagaagggtagtgctcctgcggatttccagccatc 527
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 242 bits (122), Expect = 2e-60 Identities = 242/282 (85%) Strand = Plus / Plus Query: 138 agagggggtgctgtatgccaagaaggactacaacctggcgaagcacccgcagattgatgt 197 ||||||||| |||| ||||||||||||||||| |||| || ||||| ||||||||||| Sbjct: 20669678 agagggggttttgtacgccaagaaggactacaatttggcaaaacacccacagattgatgt 20669737 Query: 198 gccgaacctccaggtgatcaagctcatgcagagcttcaagtctaaggaatacgtcaggga 257 ||| ||||| ||||| |||||||||||||||||||||||||| ||||| || |||||||| Sbjct: 20669738 gccaaaccttcaggtcatcaagctcatgcagagcttcaagtccaaggagtatgtcaggga 20669797 Query: 258 gaccttctcgtggcagcattactattggtacctcaccaacgatggcattgagttcctgcg 317 ||||||||| |||||| | ||||| ||||||||||| || |||||||||||| |||| | Sbjct: 20669798 gaccttctcctggcagtactactactggtacctcactaatgatggcattgagcacctgag 20669857 Query: 318 caacttcctcaacctgccgtctgagattgtgcctgccacgctcaaaaaatctgccaggcc 377 || | ||| ||| |||||||||||||||| ||||| || ||||| || ||||| ||||| Sbjct: 20669858 gaattaccttaacttgccgtctgagattgtacctgctacactcaagaagtctgcaaggcc 20669917 Query: 378 tcctggccgcccactcggttctggcccacctggtgatcgccc 419 || ||||||||| | || |||||||| |||||||||||||| Sbjct: 20669918 accaggccgcccatttggctctggcccccctggtgatcgccc 20669959 Score = 123 bits (62), Expect = 1e-24 Identities = 119/138 (86%) Strand = Plus / Plus Query: 421 agggggccacctcgttttgagggtgacaggccaagatatggcgacagggatggttaccgt 480 ||||| |||||||| || || || ||||| ||||| | ||| ||| ||||||| |||||| Sbjct: 20670524 aggggcccacctcggttcgaaggggacagaccaaggtttggagaccgggatggctaccgt 20670583 Query: 481 ggcggtcctcgtggtgcacctggtgactttggtggtgagaaaggcggagctcctgcagac 540 || || ||||||||||| |||||||| |||||||||||||| || || ||||||||||| Sbjct: 20670584 ggtggacctcgtggtgcgcctggtgattttggtggtgagaagggtggtgctcctgcagaa 20670643 Query: 541 ttccagccatcattcagg 558 |||||||||||||||||| Sbjct: 20670644 ttccagccatcattcagg 20670661 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 90 gatcatctccaagaagaaccgcaatgagatttgcaagtacctcttccaag 139 ||||||| ||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 20669149 gatcatccccaagaagaaccggaatgagatctgcaagtacctcttccaag 20669198
>dbj|AP004775.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0451A10 Length = 137046 Score = 242 bits (122), Expect = 2e-60 Identities = 242/282 (85%) Strand = Plus / Plus Query: 138 agagggggtgctgtatgccaagaaggactacaacctggcgaagcacccgcagattgatgt 197 ||||||||| |||| ||||||||||||||||| |||| || ||||| ||||||||||| Sbjct: 20784 agagggggttttgtacgccaagaaggactacaatttggcaaaacacccacagattgatgt 20843 Query: 198 gccgaacctccaggtgatcaagctcatgcagagcttcaagtctaaggaatacgtcaggga 257 ||| ||||| ||||| |||||||||||||||||||||||||| ||||| || |||||||| Sbjct: 20844 gccaaaccttcaggtcatcaagctcatgcagagcttcaagtccaaggagtatgtcaggga 20903 Query: 258 gaccttctcgtggcagcattactattggtacctcaccaacgatggcattgagttcctgcg 317 ||||||||| |||||| | ||||| ||||||||||| || |||||||||||| |||| | Sbjct: 20904 gaccttctcctggcagtactactactggtacctcactaatgatggcattgagcacctgag 20963 Query: 318 caacttcctcaacctgccgtctgagattgtgcctgccacgctcaaaaaatctgccaggcc 377 || | ||| ||| |||||||||||||||| ||||| || ||||| || ||||| ||||| Sbjct: 20964 gaattaccttaacttgccgtctgagattgtacctgctacactcaagaagtctgcaaggcc 21023 Query: 378 tcctggccgcccactcggttctggcccacctggtgatcgccc 419 || ||||||||| | || |||||||| |||||||||||||| Sbjct: 21024 accaggccgcccatttggctctggcccccctggtgatcgccc 21065 Score = 123 bits (62), Expect = 1e-24 Identities = 119/138 (86%) Strand = Plus / Plus Query: 421 agggggccacctcgttttgagggtgacaggccaagatatggcgacagggatggttaccgt 480 ||||| |||||||| || || || ||||| ||||| | ||| ||| ||||||| |||||| Sbjct: 21630 aggggcccacctcggttcgaaggggacagaccaaggtttggagaccgggatggctaccgt 21689 Query: 481 ggcggtcctcgtggtgcacctggtgactttggtggtgagaaaggcggagctcctgcagac 540 || || ||||||||||| |||||||| |||||||||||||| || || ||||||||||| Sbjct: 21690 ggtggacctcgtggtgcgcctggtgattttggtggtgagaagggtggtgctcctgcagaa 21749 Query: 541 ttccagccatcattcagg 558 |||||||||||||||||| Sbjct: 21750 ttccagccatcattcagg 21767 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 90 gatcatctccaagaagaaccgcaatgagatttgcaagtacctcttccaag 139 ||||||| ||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 20255 gatcatccccaagaagaaccggaatgagatctgcaagtacctcttccaag 20304
>dbj|AP005469.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0040I22 Length = 134273 Score = 242 bits (122), Expect = 2e-60 Identities = 242/282 (85%) Strand = Plus / Plus Query: 138 agagggggtgctgtatgccaagaaggactacaacctggcgaagcacccgcagattgatgt 197 ||||||||| |||| ||||||||||||||||| |||| || ||||| ||||||||||| Sbjct: 66533 agagggggttttgtacgccaagaaggactacaatttggcaaaacacccacagattgatgt 66592 Query: 198 gccgaacctccaggtgatcaagctcatgcagagcttcaagtctaaggaatacgtcaggga 257 ||| ||||| ||||| |||||||||||||||||||||||||| ||||| || |||||||| Sbjct: 66593 gccaaaccttcaggtcatcaagctcatgcagagcttcaagtccaaggagtatgtcaggga 66652 Query: 258 gaccttctcgtggcagcattactattggtacctcaccaacgatggcattgagttcctgcg 317 ||||||||| |||||| | ||||| ||||||||||| || |||||||||||| |||| | Sbjct: 66653 gaccttctcctggcagtactactactggtacctcactaatgatggcattgagcacctgag 66712 Query: 318 caacttcctcaacctgccgtctgagattgtgcctgccacgctcaaaaaatctgccaggcc 377 || | ||| ||| |||||||||||||||| ||||| || ||||| || ||||| ||||| Sbjct: 66713 gaattaccttaacttgccgtctgagattgtacctgctacactcaagaagtctgcaaggcc 66772 Query: 378 tcctggccgcccactcggttctggcccacctggtgatcgccc 419 || ||||||||| | || |||||||| |||||||||||||| Sbjct: 66773 accaggccgcccatttggctctggcccccctggtgatcgccc 66814 Score = 123 bits (62), Expect = 1e-24 Identities = 119/138 (86%) Strand = Plus / Plus Query: 421 agggggccacctcgttttgagggtgacaggccaagatatggcgacagggatggttaccgt 480 ||||| |||||||| || || || ||||| ||||| | ||| ||| ||||||| |||||| Sbjct: 67379 aggggcccacctcggttcgaaggggacagaccaaggtttggagaccgggatggctaccgt 67438 Query: 481 ggcggtcctcgtggtgcacctggtgactttggtggtgagaaaggcggagctcctgcagac 540 || || ||||||||||| |||||||| |||||||||||||| || || ||||||||||| Sbjct: 67439 ggtggacctcgtggtgcgcctggtgattttggtggtgagaagggtggtgctcctgcagaa 67498 Query: 541 ttccagccatcattcagg 558 |||||||||||||||||| Sbjct: 67499 ttccagccatcattcagg 67516 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 90 gatcatctccaagaagaaccgcaatgagatttgcaagtacctcttccaag 139 ||||||| ||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 66004 gatcatccccaagaagaaccggaatgagatctgcaagtacctcttccaag 66053
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 228 bits (115), Expect = 2e-56 Identities = 232/271 (85%) Strand = Plus / Minus Query: 149 tgtatgccaagaaggactacaacctggcgaagcacccgcagattgatgtgccgaacctcc 208 |||||||||||||||||||||||||||| |||||||| || |||||||||| ||| | Sbjct: 42419099 tgtatgccaagaaggactacaacctggccaagcacccaaaggttgatgtgcccaacttgg 42419040 Query: 209 aggtgatcaagctcatgcagagcttcaagtctaaggaatacgtcagggagaccttctcgt 268 ||||||| ||||||||||||||||||||||| ||||| || || |||||||||||||||| Sbjct: 42419039 aggtgattaagctcatgcagagcttcaagtcaaaggagtatgtgagggagaccttctcgt 42418980 Query: 269 ggcagcattactattggtacctcaccaacgatggcattgagttcctgcgcaacttcctca 328 ||||||| ||||| |||||||| ||||| |||||||||||| ||| |||| || ||||| Sbjct: 42418979 ggcagcactactactggtacctgaccaatgatggcattgagcacctccgcagctacctca 42418920 Query: 329 acctgccgtctgagattgtgcctgccacgctcaaaaaatctgccaggcctcctggccgcc 388 ||||||| |||||| |||||||| ||| ||||| || ||||||| ||| || |||| Sbjct: 42418919 acctgccatctgaggttgtgcctaacaccctcaagaagtctgccaagcccccgtctcgcc 42418860 Query: 389 cactcggttctggcccacctggtgatcgccc 419 || |||| |||||||| |||||||| ||||| Sbjct: 42418859 cattcggctctggccctcctggtgaccgccc 42418829 Score = 83.8 bits (42), Expect = 9e-13 Identities = 102/122 (83%) Strand = Plus / Minus Query: 430 cctcgttttgagggtgacaggccaagatatggcgacagggatggttaccgtggcggtcct 489 ||||| ||||||||||||||||| || | ||| ||||||||||||||| | || || || Sbjct: 42418335 cctcgctttgagggtgacaggcccaggtttggtgacagggatggttacaggggtggccca 42418276 Query: 490 cgtggtgcacctggtgactttggtggtgagaaaggcggagctcctgcagacttccagcca 549 |||||||| || ||||| |||||||| ||||| || || ||||| || || ||||||||| Sbjct: 42418275 cgtggtgctccaggtgattttggtggcgagaagggtggtgctccagctgagttccagcca 42418216 Query: 550 tc 551 || Sbjct: 42418215 tc 42418214 Score = 63.9 bits (32), Expect = 8e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 90 gatcatctccaagaagaaccgcaatgagatttgcaagtacctcttcca 137 |||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 42419508 gatcatctccaagaagaaccgccgcgagatctgcaagtacctcttcca 42419461
>dbj|AP003263.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0483G10 Length = 190721 Score = 228 bits (115), Expect = 2e-56 Identities = 232/271 (85%) Strand = Plus / Minus Query: 149 tgtatgccaagaaggactacaacctggcgaagcacccgcagattgatgtgccgaacctcc 208 |||||||||||||||||||||||||||| |||||||| || |||||||||| ||| | Sbjct: 78437 tgtatgccaagaaggactacaacctggccaagcacccaaaggttgatgtgcccaacttgg 78378 Query: 209 aggtgatcaagctcatgcagagcttcaagtctaaggaatacgtcagggagaccttctcgt 268 ||||||| ||||||||||||||||||||||| ||||| || || |||||||||||||||| Sbjct: 78377 aggtgattaagctcatgcagagcttcaagtcaaaggagtatgtgagggagaccttctcgt 78318 Query: 269 ggcagcattactattggtacctcaccaacgatggcattgagttcctgcgcaacttcctca 328 ||||||| ||||| |||||||| ||||| |||||||||||| ||| |||| || ||||| Sbjct: 78317 ggcagcactactactggtacctgaccaatgatggcattgagcacctccgcagctacctca 78258 Query: 329 acctgccgtctgagattgtgcctgccacgctcaaaaaatctgccaggcctcctggccgcc 388 ||||||| |||||| |||||||| ||| ||||| || ||||||| ||| || |||| Sbjct: 78257 acctgccatctgaggttgtgcctaacaccctcaagaagtctgccaagcccccgtctcgcc 78198 Query: 389 cactcggttctggcccacctggtgatcgccc 419 || |||| |||||||| |||||||| ||||| Sbjct: 78197 cattcggctctggccctcctggtgaccgccc 78167 Score = 83.8 bits (42), Expect = 9e-13 Identities = 102/122 (83%) Strand = Plus / Minus Query: 430 cctcgttttgagggtgacaggccaagatatggcgacagggatggttaccgtggcggtcct 489 ||||| ||||||||||||||||| || | ||| ||||||||||||||| | || || || Sbjct: 77673 cctcgctttgagggtgacaggcccaggtttggtgacagggatggttacaggggtggccca 77614 Query: 490 cgtggtgcacctggtgactttggtggtgagaaaggcggagctcctgcagacttccagcca 549 |||||||| || ||||| |||||||| ||||| || || ||||| || || ||||||||| Sbjct: 77613 cgtggtgctccaggtgattttggtggcgagaagggtggtgctccagctgagttccagcca 77554 Query: 550 tc 551 || Sbjct: 77553 tc 77552 Score = 63.9 bits (32), Expect = 8e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 90 gatcatctccaagaagaaccgcaatgagatttgcaagtacctcttcca 137 |||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 78846 gatcatctccaagaagaaccgccgcgagatctgcaagtacctcttcca 78799
>gb|BT017535.1| Zea mays clone EL01N0422A10.c mRNA sequence Length = 568 Score = 224 bits (113), Expect = 4e-55 Identities = 212/245 (86%) Strand = Plus / Plus Query: 316 cgcaacttcctcaacctgccgtctgagattgtgcctgccacgctcaaaaaatctgccagg 375 ||||||| ||| ||||| ||||||||||| ||||||||||||||||| || ||||||| | Sbjct: 17 cgcaactacctgaacctcccgtctgagatcgtgcctgccacgctcaagaagtctgccaag 76 Query: 376 cctcctggccgcccactcggttctggcccacctggtgatcgcccgagggggccacctcgt 435 || |||||||||||| | || |||||||| |||||||| ||||| ||||| ||| ||| Sbjct: 77 ccacctggccgcccatttggctctggccctcctggtgaccgcccaaggggcccaggccgt 136 Query: 436 tttgagggtgacaggccaagatatggcgacagggatggttaccgtggcggtcctcgtggt 495 ||||| || ||||||||||| | ||| ||||||||||| |||||||| |||||||||||| Sbjct: 137 tttgacggcgacaggccaaggtttggtgacagggatgggtaccgtggtggtcctcgtggt 196 Query: 496 gcacctggtgactttggtggtgagaaaggcggagctcctgcagacttccagccatcattc 555 || ||||||||||||||||| || || | ||||||||||| || ||||||||||||||| Sbjct: 197 gctcctggtgactttggtggcgataagagtggagctcctgctgagttccagccatcattc 256 Query: 556 aggag 560 ||||| Sbjct: 257 aggag 261
>gb|EF051306.1| Gymnadenia conopsea 40S ribosomal protein-like mRNA, complete sequence Length = 827 Score = 163 bits (82), Expect = 1e-36 Identities = 220/266 (82%) Strand = Plus / Plus Query: 88 atgatcatctccaagaagaaccgcaatgagatttgcaagtacctcttccaagagggggtg 147 ||||||||| | ||||||||||| ||||||| | ||||||||| ||||||||||| ||| Sbjct: 40 atgatcatcccgaagaagaaccggcatgagatctccaagtacctattccaagagggcgtg 99 Query: 148 ctgtatgccaagaaggactacaacctggcgaagcacccgcagattgatgtgccgaacctc 207 || || || |||||||||||||| ||||| |||||||| ||||||| || ||||| ||| Sbjct: 100 ctctacgcgaagaaggactacaatctggcaaagcaccctgagattgacgtaccgaatctc 159 Query: 208 caggtgatcaagctcatgcagagcttcaagtctaaggaatacgtcagggagaccttctcg 267 |||||||| ||||| ||||||||||| || |||| | ||| ||||| ||||||||| || Sbjct: 160 caggtgataaagctgatgcagagctttaaatctagaggatatgtcagtgagaccttcgcg 219 Query: 268 tggcagcattactattggtacctcaccaacgatggcattgagttcctgcgcaacttcctc 327 ||| ||| ||||| ||||| || || ||||| |||||||| || ||| | | ||| ||| Sbjct: 220 tggatgcactactactggtatcttactaacgacggcattgaatttctgaggacctttctc 279 Query: 328 aacctgccgtctgagattgtgcctgc 353 || || || || |||||||||||||| Sbjct: 280 aatctaccatcagagattgtgcctgc 305 Score = 50.1 bits (25), Expect = 0.012 Identities = 55/65 (84%) Strand = Plus / Plus Query: 409 ggtgatcgcccgagggggccacctcgttttgagggtgacaggccaagatatggcgacagg 468 ||||| ||| ||||||| || || ||||||||||| || |||||||||| ||| || ||| Sbjct: 358 ggtgaccgcacgaggggccctccacgttttgagggagataggccaagatttggggatagg 417 Query: 469 gatgg 473 ||||| Sbjct: 418 gatgg 422
>gb|DQ268860.1| Solanum tuberosum clone 178H07 40S ribosomal protein S10-like protein mRNA, complete cds Length = 735 Score = 111 bits (56), Expect = 4e-21 Identities = 158/192 (82%) Strand = Plus / Plus Query: 123 caagtacctcttccaagagggggtgctgtatgccaagaaggactacaacctggcgaagca 182 ||||||||||||||||||||| || | ||| ||||||||||||||| ||||||| || Sbjct: 72 caagtacctcttccaagagggagtatgctttgctaagaaggactacaacttggcgaaaca 131 Query: 183 cccgcagattgatgtgccgaacctccaggtgatcaagctcatgcagagcttcaagtctaa 242 || | ||||||||||||||||| || ||||| ||||| ||||||||||| ||||| || Sbjct: 132 tcccaacattgatgtgccgaacctacaagtgattaagctgatgcagagctttaagtcaaa 191 Query: 243 ggaatacgtcagggagaccttctcgtggcagcattactattggtacctcaccaacgatgg 302 ||| || || | |||||||| | ||| ||| ||||| ||||| || ||||| ||||| Sbjct: 192 ggagtatgtgcgtgagacctttgcttggatgcactactactggtatcttaccaatgatgg 251 Query: 303 cattgagttcct 314 |||||||||||| Sbjct: 252 cattgagttcct 263 Score = 69.9 bits (35), Expect = 1e-08 Identities = 80/95 (84%) Strand = Plus / Plus Query: 439 gagggtgacaggccaagatatggcgacagggatggttaccgtggcggtcctcgtggtgca 498 |||||||| |||||||| | ||| || |||||||||||||||| ||||| | ||| || Sbjct: 385 gagggtgataggccaaggtttggtgatagggatggttaccgtgctggtccaagaggtcca 444 Query: 499 cctggtgactttggtggtgagaaaggcggagctcc 533 |||||||| ||||| |||||||| || |||||||| Sbjct: 445 cctggtgaatttggaggtgagaagggtggagctcc 479
>gb|DQ252484.1| Solanum tuberosum clone 048B07 40S ribosomal protein S10-like mRNA, complete cds Length = 738 Score = 111 bits (56), Expect = 4e-21 Identities = 158/192 (82%) Strand = Plus / Plus Query: 123 caagtacctcttccaagagggggtgctgtatgccaagaaggactacaacctggcgaagca 182 ||||||||||||||||||||| || | ||| ||||||||||||||| ||||||| || Sbjct: 70 caagtacctcttccaagagggagtatgctttgctaagaaggactacaacttggcgaaaca 129 Query: 183 cccgcagattgatgtgccgaacctccaggtgatcaagctcatgcagagcttcaagtctaa 242 || | ||||||||||||||||| || ||||| ||||| ||||||||||| ||||| || Sbjct: 130 tcccaacattgatgtgccgaacctacaagtgattaagctgatgcagagctttaagtcaaa 189 Query: 243 ggaatacgtcagggagaccttctcgtggcagcattactattggtacctcaccaacgatgg 302 ||| || || | |||||||| | ||| ||| ||||| ||||| || ||||| ||||| Sbjct: 190 ggagtatgtgcgtgagacctttgcttggatgcactactactggtatcttaccaatgatgg 249 Query: 303 cattgagttcct 314 |||||||||||| Sbjct: 250 cattgagttcct 261 Score = 69.9 bits (35), Expect = 1e-08 Identities = 80/95 (84%) Strand = Plus / Plus Query: 439 gagggtgacaggccaagatatggcgacagggatggttaccgtggcggtcctcgtggtgca 498 |||||||| |||||||| | ||| || |||||||||||||||| ||||| | ||| || Sbjct: 383 gagggtgataggccaaggtttggtgatagggatggttaccgtgctggtccaagaggtcca 442 Query: 499 cctggtgactttggtggtgagaaaggcggagctcc 533 |||||||| ||||| |||||||| || |||||||| Sbjct: 443 cctggtgaatttggaggtgagaagggtggagctcc 477
>gb|DQ252521.1| Solanum tuberosum clone 111F10 40S ribosomal protein S10-like mRNA, complete cds Length = 859 Score = 97.6 bits (49), Expect = 6e-17 Identities = 184/229 (80%) Strand = Plus / Plus Query: 86 ccatgatcatctccaagaagaaccgcaatgagatttgcaagtacctcttccaagaggggg 145 ||||||| ||||| |||||||||| | ||||| | ||| ||||||||||||||||| | Sbjct: 47 ccatgattatctcagagaagaaccgtagagagatctccaaatacctcttccaagagggag 106 Query: 146 tgctgtatgccaagaaggactacaacctggcgaagcacccgcagattgatgtgccgaacc 205 || || || |||||||| |||||| |||| ||||| ||| || |||||||| || | Sbjct: 107 tgtgctacgcgaagaaggattacaacttggccaagcatccgttaatcgatgtgccaaatc 166 Query: 206 tccaggtgatcaagctcatgcagagcttcaagtctaaggaatacgtcagggagaccttct 265 | ||||| ||||| || |||||||||||||| |||||||| || || | ||||| ||| Sbjct: 167 tacaggttatcaaactgatgcagagcttcaaatctaaggagtatgttcgcgagacattcg 226 Query: 266 cgtggcagcattactattggtacctcaccaacgatggcattgagttcct 314 | ||| ||| ||||| |||||||| || || ||||||||||||||||| Sbjct: 227 cttggatgcactactactggtaccttacaaatgatggcattgagttcct 275 Score = 97.6 bits (49), Expect = 6e-17 Identities = 97/113 (85%) Strand = Plus / Plus Query: 436 tttgagggtgacaggccaagatatggcgacagggatggttaccgtggcggtcctcgtggt 495 ||||||||||| |||||||| ||||||||||| ||||||||||||| || ||| | ||| Sbjct: 394 tttgagggtgataggccaaggtatggcgacagagatggttaccgtgctggacctagaggt 453 Query: 496 gcacctggtgactttggtggtgagaaaggcggagctcctgcagacttccagcc 548 |||||||||| ||||| |||||||| || |||||||| || |||| |||||| Sbjct: 454 ccacctggtgagtttggaggtgagaagggtggagctccagctgactaccagcc 506
>ref|NM_118706.2| Arabidopsis thaliana structural constituent of ribosome (AT4G25740) mRNA, complete cds Length = 746 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 189 gattgatgtgccgaacctccaggtgatcaagctcatgcagagcttcaagtctaaggaata 248 ||||||||| || ||||| || ||||| |||||||||||||| |||||||| ||||| || Sbjct: 149 gattgatgtaccaaacctgcaagtgattaagctcatgcagagtttcaagtccaaggagta 208 Query: 249 cgtcagggagaccttctcgtggcagcattactattggt 286 ||| |||||||| || ||||| |||||| ||||||| Sbjct: 209 cgttagggagacatttgcgtggatgcattattattggt 246 Score = 44.1 bits (22), Expect = 0.77 Identities = 79/98 (80%) Strand = Plus / Plus Query: 399 tggcccacctggtgatcgcccgagggggccacctcgttttgagggtgacaggccaagata 458 |||||||||||||||||||| || || |||||||| | ||| || ||| | || |||| Sbjct: 356 tggcccacctggtgatcgccaaagaggaccacctcgctctgatggagaccgtcccagatt 415 Query: 459 tggcgacagggatggttaccgtggcggtcctcgtggtg 496 ||| ||| | ||||| |||||||| || || ||||||| Sbjct: 416 tggtgaccgtgatggataccgtggaggcccacgtggtg 453
>ref|NM_001036641.1| Arabidopsis thaliana structural constituent of ribosome (AT4G25740) mRNA, complete cds Length = 736 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 189 gattgatgtgccgaacctccaggtgatcaagctcatgcagagcttcaagtctaaggaata 248 ||||||||| || ||||| || ||||| |||||||||||||| |||||||| ||||| || Sbjct: 164 gattgatgtaccaaacctgcaagtgattaagctcatgcagagtttcaagtccaaggagta 223 Query: 249 cgtcagggagaccttctcgtggcagcattactattggt 286 ||| |||||||| || ||||| |||||| ||||||| Sbjct: 224 cgttagggagacatttgcgtggatgcattattattggt 261
>gb|AY113926.1| Arabidopsis thaliana putative ribosomal protein S10 (At4g25740) mRNA, complete cds Length = 565 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 189 gattgatgtgccgaacctccaggtgatcaagctcatgcagagcttcaagtctaaggaata 248 ||||||||| || ||||| || ||||| |||||||||||||| |||||||| ||||| || Sbjct: 102 gattgatgtaccaaacctgcaagtgattaagctcatgcagagtttcaagtccaaggagta 161 Query: 249 cgtcagggagaccttctcgtggcagcattactattggt 286 ||| |||||||| || ||||| |||||| ||||||| Sbjct: 162 cgttagggagacatttgcgtggatgcattattattggt 199 Score = 44.1 bits (22), Expect = 0.77 Identities = 79/98 (80%) Strand = Plus / Plus Query: 399 tggcccacctggtgatcgcccgagggggccacctcgttttgagggtgacaggccaagata 458 |||||||||||||||||||| || || |||||||| | ||| || ||| | || |||| Sbjct: 309 tggcccacctggtgatcgccaaagaggaccacctcgctctgatggagaccgtcccagatt 368 Query: 459 tggcgacagggatggttaccgtggcggtcctcgtggtg 496 ||| ||| | ||||| |||||||| || || ||||||| Sbjct: 369 tggtgaccgtgatggataccgtggaggcccacgtggtg 406
>gb|AY035172.1| Arabidopsis thaliana putative ribosomal protein S10 (At4g25740) mRNA, complete cds Length = 762 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 189 gattgatgtgccgaacctccaggtgatcaagctcatgcagagcttcaagtctaaggaata 248 ||||||||| || ||||| || ||||| |||||||||||||| |||||||| ||||| || Sbjct: 149 gattgatgtaccaaacctgcaagtgattaagctcatgcagagtttcaagtccaaggagta 208 Query: 249 cgtcagggagaccttctcgtggcagcattactattggt 286 ||| |||||||| || ||||| |||||| ||||||| Sbjct: 209 cgttagggagacatttgcgtggatgcattattattggt 246 Score = 44.1 bits (22), Expect = 0.77 Identities = 79/98 (80%) Strand = Plus / Plus Query: 399 tggcccacctggtgatcgcccgagggggccacctcgttttgagggtgacaggccaagata 458 |||||||||||||||||||| || || |||||||| | ||| || ||| | || |||| Sbjct: 356 tggcccacctggtgatcgccaaagaggaccacctcgctctgatggagaccgtcccagatt 415 Query: 459 tggcgacagggatggttaccgtggcggtcctcgtggtg 496 ||| ||| | ||||| |||||||| || || ||||||| Sbjct: 416 tggtgaccgtgatggataccgtggaggcccacgtggtg 453
>emb|AL161563.2|ATCHRIV63 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 63 Length = 198777 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Minus Query: 189 gattgatgtgccgaacctccaggtgatcaagctcatgcagagcttcaagtctaaggaata 248 ||||||||| || ||||| || ||||| |||||||||||||| |||||||| ||||| || Sbjct: 190395 gattgatgtaccaaacctgcaagtgattaagctcatgcagagtttcaagtccaaggagta 190336 Query: 249 cgtcagggagaccttctcgtggcagcattactattggt 286 ||| |||||||| || ||||| |||||| ||||||| Sbjct: 190335 cgttagggagacatttgcgtggatgcattattattggt 190298
>emb|AL050400.1|ATL73G19 Arabidopsis thaliana DNA chromosome 4, cosmid clone L73G19 (ESSA project) Length = 42446 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Minus Query: 189 gattgatgtgccgaacctccaggtgatcaagctcatgcagagcttcaagtctaaggaata 248 ||||||||| || ||||| || ||||| |||||||||||||| |||||||| ||||| || Sbjct: 38888 gattgatgtaccaaacctgcaagtgattaagctcatgcagagtttcaagtccaaggagta 38829 Query: 249 cgtcagggagaccttctcgtggcagcattactattggt 286 ||| |||||||| || ||||| |||||| ||||||| Sbjct: 38828 cgttagggagacatttgcgtggatgcattattattggt 38791
>emb|AL049480.1|ATF14M19 Arabidopsis thaliana DNA chromosome 4, BAC clone F14M19 (ESSA project) Length = 91228 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Minus Query: 189 gattgatgtgccgaacctccaggtgatcaagctcatgcagagcttcaagtctaaggaata 248 ||||||||| || ||||| || ||||| |||||||||||||| |||||||| ||||| || Sbjct: 5539 gattgatgtaccaaacctgcaagtgattaagctcatgcagagtttcaagtccaaggagta 5480 Query: 249 cgtcagggagaccttctcgtggcagcattactattggt 286 ||| |||||||| || ||||| |||||| ||||||| Sbjct: 5479 cgttagggagacatttgcgtggatgcattattattggt 5442
>gb|DQ226795.1| Boechera divaricarpa isolate SLW-B-C05 mRNA sequence Length = 448 Score = 71.9 bits (36), Expect = 3e-09 Identities = 72/84 (85%) Strand = Plus / Plus Query: 399 tggcccacctggtgatcgcccgagggggccacctcgttttgagggtgacaggccaagata 458 |||||||||||||||||||||||| || |||||||| ||||| || ||| | || ||||| Sbjct: 149 tggcccacctggtgatcgcccgagaggaccacctcgctttgaaggagaccgtcccagata 208 Query: 459 tggcgacagggatggttaccgtgg 482 ||| ||| | ||||| |||||||| Sbjct: 209 tggtgaccgtgatggataccgtgg 232
>emb|AJ538899.1|NTA538899 Nicotiana tabacum cDNA-AFLP-fragment BT2-M33-002 Length = 447 Score = 63.9 bits (32), Expect = 8e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 223 atgcagagcttcaagtctaaggaatacgtcagggagaccttctcgtggcagcattactat 282 |||||||| |||||||| ||||||||||| | |||||||| | ||| ||| |||||| Sbjct: 51 atgcagagtttcaagtcgaaggaatacgtgcgtgagacctttgcttggatgcactactat 110 Query: 283 tggtacctcaccaacgatggcattgagttcct 314 ||||| || ||||| || |||||||||||||| Sbjct: 111 tggtatctgaccaatgacggcattgagttcct 142
>gb|AC189309.1| Brassica rapa subsp. pekinensis clone KBrB034C07, complete sequence Length = 109282 Score = 61.9 bits (31), Expect = 3e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 202 aacctccaggtgatcaagctcatgcagagcttcaagtctaaggaatacgtcagggagac 260 ||||| || |||||||||||||||||||| ||||| || ||||| ||||| |||||||| Sbjct: 104562 aacctgcaagtgatcaagctcatgcagagtttcaaatccaaggagtacgttagggagac 104504
>emb|CT025844.1| Medicago truncatula chromosome 5 clone mte1-41h18, COMPLETE SEQUENCE Length = 103321 Score = 61.9 bits (31), Expect = 3e-06 Identities = 88/107 (82%) Strand = Plus / Plus Query: 151 tatgccaagaaggactacaacctggcgaagcacccgcagattgatgtgccgaacctccag 210 ||||| |||||||| | ||| |||| |||||||| | ||||||||||| || || || Sbjct: 79135 tatgcaaagaaggatttcaatttggctaagcacccagaaattgatgtgccaaatctgcaa 79194 Query: 211 gtgatcaagctcatgcagagcttcaagtctaaggaatacgtcaggga 257 ||||| ||||| |||||||||||||| |||| |||||| || ||||| Sbjct: 79195 gtgattaagctgatgcagagcttcaaatctagggaatatgtgaggga 79241
>gb|DQ066194.1| Ixodes scapularis isolate ISUFL81 40S ribosomal protein S10 mRNA, complete cds Length = 471 Score = 60.0 bits (30), Expect = 1e-05 Identities = 72/86 (83%) Strand = Plus / Plus Query: 277 tactattggtacctcaccaacgatggcattgagttcctgcgcaacttcctcaacctgccg 336 ||||| |||||||| |||||||| ||||| ||| |||||| |||||||| ||||||| Sbjct: 193 tactactggtacctgaccaacgagggcatccagtacctgcgggacttcctccacctgccc 252 Query: 337 tctgagattgtgcctgccacgctcaa 362 | ||||||||||| ||||| ||||| Sbjct: 253 cccgagattgtgccggccaccctcaa 278
>gb|AY961467.1| Phytophthora infestans clone MY-06-E-07 ribosomal protein S10 mRNA, complete cds Length = 546 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 193 gatgtgccgaacctccaggtgatcaagctcatgcag 228 |||||||| ||||||||||| ||||||||||||||| Sbjct: 130 gatgtgcccaacctccaggtcatcaagctcatgcag 165
>dbj|AK226326.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL05-14-A02 Length = 779 Score = 50.1 bits (25), Expect = 0.012 Identities = 142/181 (78%) Strand = Plus / Plus Query: 106 aaccgcaatgagatttgcaagtacctcttccaagagggggtgctgtatgccaagaaggac 165 |||||||| || || ||||||||||||||| |||| || || | ||| |||||||| Sbjct: 91 aaccgcaaagaaatctgcaagtacctcttcaaagaaggagtttgctttgcgaagaaggat 150 Query: 166 tacaacctggcgaagcacccgcagattgatgtgccgaacctccaggtgatcaagctcatg 225 | ||| || || ||||| ||| ||| ||||| || ||||| || ||||| ||||| ||| Sbjct: 151 ttcaatcttgctaagcatccgttgatcgatgtccccaacctacaagtgattaagcttatg 210 Query: 226 cagagcttcaagtctaaggaatacgtcagggagaccttctcgtggcagcattactattgg 285 ||||| ||||| || ||||| || || |||||||| || | ||| ||||||||||||| Sbjct: 211 cagagtttcaaatccaaggagtatgttagggagacatttgcctggatgcattactattgg 270 Query: 286 t 286 | Sbjct: 271 t 271
>ref|NM_124643.2| Arabidopsis thaliana structural constituent of ribosome (AT5G52650) mRNA, complete cds Length = 778 Score = 50.1 bits (25), Expect = 0.012 Identities = 142/181 (78%) Strand = Plus / Plus Query: 106 aaccgcaatgagatttgcaagtacctcttccaagagggggtgctgtatgccaagaaggac 165 |||||||| || || ||||||||||||||| |||| || || | ||| |||||||| Sbjct: 91 aaccgcaaagaaatctgcaagtacctcttcaaagaaggagtttgctttgcgaagaaggat 150 Query: 166 tacaacctggcgaagcacccgcagattgatgtgccgaacctccaggtgatcaagctcatg 225 | ||| || || ||||| ||| ||| ||||| || ||||| || ||||| ||||| ||| Sbjct: 151 ttcaatcttgctaagcatccgttgatcgatgtccccaacctacaagtgattaagcttatg 210 Query: 226 cagagcttcaagtctaaggaatacgtcagggagaccttctcgtggcagcattactattgg 285 ||||| ||||| || ||||| || || |||||||| || | ||| ||||||||||||| Sbjct: 211 cagagtttcaaatccaaggagtatgttagggagacatttgcctggatgcattactattgg 270 Query: 286 t 286 | Sbjct: 271 t 271
>gb|AY122932.1| Arabidopsis thaliana unknown protein (At5g52650) mRNA, complete cds Length = 571 Score = 50.1 bits (25), Expect = 0.012 Identities = 142/181 (78%) Strand = Plus / Plus Query: 106 aaccgcaatgagatttgcaagtacctcttccaagagggggtgctgtatgccaagaaggac 165 |||||||| || || ||||||||||||||| |||| || || | ||| |||||||| Sbjct: 19 aaccgcaaagaaatctgcaagtacctcttcaaagaaggagtttgctttgcgaagaaggat 78 Query: 166 tacaacctggcgaagcacccgcagattgatgtgccgaacctccaggtgatcaagctcatg 225 | ||| || || ||||| ||| ||| ||||| || ||||| || ||||| ||||| ||| Sbjct: 79 ttcaatcttgctaagcatccgttgatcgatgtccccaacctacaagtgattaagcttatg 138 Query: 226 cagagcttcaagtctaaggaatacgtcagggagaccttctcgtggcagcattactattgg 285 ||||| ||||| || ||||| || || |||||||| || | ||| ||||||||||||| Sbjct: 139 cagagtttcaaatccaaggagtatgttagggagacatttgcctggatgcattactattgg 198 Query: 286 t 286 | Sbjct: 199 t 199
>gb|AY065217.1| Arabidopsis thaliana unknown protein (At5g52650) mRNA, complete cds Length = 778 Score = 50.1 bits (25), Expect = 0.012 Identities = 142/181 (78%) Strand = Plus / Plus Query: 106 aaccgcaatgagatttgcaagtacctcttccaagagggggtgctgtatgccaagaaggac 165 |||||||| || || ||||||||||||||| |||| || || | ||| |||||||| Sbjct: 84 aaccgcaaagaaatctgcaagtacctcttcaaagaaggagtttgctttgcgaagaaggat 143 Query: 166 tacaacctggcgaagcacccgcagattgatgtgccgaacctccaggtgatcaagctcatg 225 | ||| || || ||||| ||| ||| ||||| || ||||| || ||||| ||||| ||| Sbjct: 144 ttcaatcttgctaagcatccgttgatcgatgtccccaacctacaagtgattaagcttatg 203 Query: 226 cagagcttcaagtctaaggaatacgtcagggagaccttctcgtggcagcattactattgg 285 ||||| ||||| || ||||| || || |||||||| || | ||| ||||||||||||| Sbjct: 204 cagagtttcaaatccaaggagtatgttagggagacatttgcctggatgcattactattgg 263 Query: 286 t 286 | Sbjct: 264 t 264
>gb|AY088678.1| Arabidopsis thaliana clone 91769 mRNA, complete sequence Length = 768 Score = 50.1 bits (25), Expect = 0.012 Identities = 142/181 (78%) Strand = Plus / Plus Query: 106 aaccgcaatgagatttgcaagtacctcttccaagagggggtgctgtatgccaagaaggac 165 |||||||| || || ||||||||||||||| |||| || || | ||| |||||||| Sbjct: 93 aaccgcaaagaaatctgcaagtacctcttcaaagaaggagtttgctttgcgaagaaggat 152 Query: 166 tacaacctggcgaagcacccgcagattgatgtgccgaacctccaggtgatcaagctcatg 225 | ||| || || ||||| ||| ||| ||||| |||||||| || ||||| ||||| ||| Sbjct: 153 ttcaatcttgctaagcatccgttgatcgatgtcccgaacctacaagtgattaagcttatg 212 Query: 226 cagagcttcaagtctaaggaatacgtcagggagaccttctcgtggcagcattactattgg 285 ||||| ||||| || ||||| || || || ||||| || | ||| ||||||||||||| Sbjct: 213 cagagtttcaaatccaaggagtatgttagagagacatttgcctggatgcattactattgg 272 Query: 286 t 286 | Sbjct: 273 t 273 Score = 46.1 bits (23), Expect = 0.20 Identities = 44/51 (86%) Strand = Plus / Plus Query: 501 tggtgactttggtggtgagaaaggcggagctcctgcagacttccagccatc 551 |||||| ||||| ||||| || || |||||||||||||| | ||||||||| Sbjct: 482 tggtgagtttggaggtgaaaagggtggagctcctgcagattaccagccatc 532
>emb|BX830280.1|CNS0A19J Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB70ZC05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 752 Score = 50.1 bits (25), Expect = 0.012 Identities = 142/181 (78%) Strand = Plus / Plus Query: 106 aaccgcaatgagatttgcaagtacctcttccaagagggggtgctgtatgccaagaaggac 165 |||||||| || || ||||||||||||||| |||| || || | ||| |||||||| Sbjct: 67 aaccgcaaagaaatctgcaagtacctcttcaaagaaggagtttgctttgcgaagaaggat 126 Query: 166 tacaacctggcgaagcacccgcagattgatgtgccgaacctccaggtgatcaagctcatg 225 | ||| || || ||||| ||| ||| ||||| || ||||| || ||||| ||||| ||| Sbjct: 127 ttcaatcttgctaagcatccgttgatcgatgtccccaacctacaagtgattaagcttatg 186 Query: 226 cagagcttcaagtctaaggaatacgtcagggagaccttctcgtggcagcattactattgg 285 ||||| ||||| || ||||| || || |||||||| || | ||| ||||||||||||| Sbjct: 187 cagagtttcaaatccaaggagtatgttagggagacatttgcctggatgcattactattgg 246 Query: 286 t 286 | Sbjct: 247 t 247
>emb|BX830062.1|CNS0A1D6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB57ZA08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 750 Score = 50.1 bits (25), Expect = 0.012 Identities = 142/181 (78%) Strand = Plus / Plus Query: 106 aaccgcaatgagatttgcaagtacctcttccaagagggggtgctgtatgccaagaaggac 165 |||||||| || || ||||||||||||||| |||| || || | ||| |||||||| Sbjct: 65 aaccgcaaagaaatctgcaagtacctcttcaaagaaggagtttgctttgcgaagaaggat 124 Query: 166 tacaacctggcgaagcacccgcagattgatgtgccgaacctccaggtgatcaagctcatg 225 | ||| || || ||||| ||| ||| ||||| || ||||| || ||||| ||||| ||| Sbjct: 125 ttcaatcttgctaagcatccgttgatcgatgtccccaacctacaagtgattaagcttatg 184 Query: 226 cagagcttcaagtctaaggaatacgtcagggagaccttctcgtggcagcattactattgg 285 ||||| ||||| || ||||| || || |||||||| || | ||| ||||||||||||| Sbjct: 185 cagagtttcaaatccaaggagtatgttagggagacatttgcctggatgcattactattgg 244 Query: 286 t 286 | Sbjct: 245 t 245
>ref|NM_123516.2| Arabidopsis thaliana structural constituent of ribosome (AT5G41520) mRNA, complete cds Length = 807 Score = 48.1 bits (24), Expect = 0.049 Identities = 66/80 (82%) Strand = Plus / Plus Query: 214 atcaagctcatgcagagcttcaagtctaaggaatacgtcagggagaccttctcgtggcag 273 |||||| | |||||||| ||||| ||||||||||| || || |||||||| | ||| | Sbjct: 208 atcaagttgatgcagagtttcaaatctaaggaatatgtgagagagacctttgcttggatg 267 Query: 274 cattactattggtacctcac 293 |||||||| |||| |||||| Sbjct: 268 cattactactggttcctcac 287
>gb|AF375440.1| Arabidopsis thaliana AT5g41520/MBK23_4 mRNA, complete cds Length = 780 Score = 48.1 bits (24), Expect = 0.049 Identities = 66/80 (82%) Strand = Plus / Plus Query: 214 atcaagctcatgcagagcttcaagtctaaggaatacgtcagggagaccttctcgtggcag 273 |||||| | |||||||| ||||| ||||||||||| || || |||||||| | ||| | Sbjct: 208 atcaagttgatgcagagtttcaaatctaaggaatatgtgagagagacctttgcttggatg 267 Query: 274 cattactattggtacctcac 293 |||||||| |||| |||||| Sbjct: 268 cattactactggttcctcac 287
>gb|AY060539.1| Arabidopsis thaliana AT5g41520/MBK23_4 mRNA, complete cds Length = 543 Score = 48.1 bits (24), Expect = 0.049 Identities = 66/80 (82%) Strand = Plus / Plus Query: 214 atcaagctcatgcagagcttcaagtctaaggaatacgtcagggagaccttctcgtggcag 273 |||||| | |||||||| ||||| ||||||||||| || || |||||||| | ||| | Sbjct: 130 atcaagttgatgcagagtttcaaatctaaggaatatgtgagagagacctttgcttggatg 189 Query: 274 cattactattggtacctcac 293 |||||||| |||| |||||| Sbjct: 190 cattactactggttcctcac 209
>gb|AY037240.1| Arabidopsis thaliana AT5g41520/MBK23_4 mRNA, complete cds Length = 781 Score = 48.1 bits (24), Expect = 0.049 Identities = 66/80 (82%) Strand = Plus / Plus Query: 214 atcaagctcatgcagagcttcaagtctaaggaatacgtcagggagaccttctcgtggcag 273 |||||| | |||||||| ||||| ||||||||||| || || |||||||| | ||| | Sbjct: 208 atcaagttgatgcagagtttcaaatctaaggaatatgtgagagagacctttgcttggatg 267 Query: 274 cattactattggtacctcac 293 |||||||| |||| |||||| Sbjct: 268 cattactactggttcctcac 287
>dbj|AB005233.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBK23 Length = 79837 Score = 48.1 bits (24), Expect = 0.049 Identities = 66/80 (82%) Strand = Plus / Minus Query: 214 atcaagctcatgcagagcttcaagtctaaggaatacgtcagggagaccttctcgtggcag 273 |||||| | |||||||| ||||| ||||||||||| || || |||||||| | ||| | Sbjct: 5167 atcaagttgatgcagagtttcaaatctaaggaatatgtgagagagacctttgcttggatg 5108 Query: 274 cattactattggtacctcac 293 |||||||| |||| |||||| Sbjct: 5107 cattactactggttcctcac 5088
>emb|BX830030.1|CNS0A1DV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB54ZD12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 828 Score = 48.1 bits (24), Expect = 0.049 Identities = 66/80 (82%) Strand = Plus / Plus Query: 214 atcaagctcatgcagagcttcaagtctaaggaatacgtcagggagaccttctcgtggcag 273 |||||| | |||||||| ||||| ||||||||||| || || |||||||| | ||| | Sbjct: 218 atcaagttgatgcagagtttcaaatctaaggaatatgtgagagagacctttgcttggatg 277 Query: 274 cattactattggtacctcac 293 |||||||| |||| |||||| Sbjct: 278 cattactactggttcctcac 297
>emb|BX832280.1|CNS0A13B Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH62ZH01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 783 Score = 48.1 bits (24), Expect = 0.049 Identities = 66/80 (82%) Strand = Plus / Plus Query: 214 atcaagctcatgcagagcttcaagtctaaggaatacgtcagggagaccttctcgtggcag 273 |||||| | |||||||| ||||| ||||||||||| || || |||||||| | ||| | Sbjct: 202 atcaagttgatgcagagtttcaaatctaaggaatatgtgagagagacctttgcttggatg 261 Query: 274 cattactattggtacctcac 293 |||||||| |||| |||||| Sbjct: 262 cattactactggttcctcac 281
>emb|AJ538646.1|NTA538646 Nicotiana tabacum cDNA-AFLP-fragment BC32-M2-013 Length = 257 Score = 46.1 bits (23), Expect = 0.20 Identities = 32/35 (91%) Strand = Plus / Plus Query: 499 cctggtgactttggtggtgagaaaggcggagctcc 533 |||||||| ||||||||||| ||||| |||||||| Sbjct: 167 cctggtgagtttggtggtgaaaaaggtggagctcc 201
>emb|AJ538565.1|NTA538565 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-025 Length = 233 Score = 46.1 bits (23), Expect = 0.20 Identities = 32/35 (91%) Strand = Plus / Minus Query: 499 cctggtgactttggtggtgagaaaggcggagctcc 533 |||||||| ||||||||||| ||||| |||||||| Sbjct: 63 cctggtgagtttggtggtgaaaaaggtggagctcc 29
>dbj|AP000590.7| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-52H4, complete sequence Length = 114288 Score = 46.1 bits (23), Expect = 0.20 Identities = 26/27 (96%) Strand = Plus / Plus Query: 28 cgccgcctccctctcccgtcccggcgc 54 |||| |||||||||||||||||||||| Sbjct: 18307 cgccccctccctctcccgtcccggcgc 18333
>dbj|AP001271.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-826F13, complete sequence Length = 210402 Score = 46.1 bits (23), Expect = 0.20 Identities = 26/27 (96%) Strand = Plus / Plus Query: 28 cgccgcctccctctcccgtcccggcgc 54 |||| |||||||||||||||||||||| Sbjct: 206398 cgccccctccctctcccgtcccggcgc 206424
>gb|U73633.1|HSU73633 Human chromosome 11 146h12 cosmid, complete sequence Length = 42845 Score = 46.1 bits (23), Expect = 0.20 Identities = 26/27 (96%) Strand = Plus / Minus Query: 28 cgccgcctccctctcccgtcccggcgc 54 |||| |||||||||||||||||||||| Sbjct: 5372 cgccccctccctctcccgtcccggcgc 5346
>dbj|D88764.1| Rana catesbeiana mRNA for alpha 2 type I collagen, complete cds Length = 4692 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Plus Query: 484 ggtcctcgtggtgcacctggtga 506 ||||||||||||||||||||||| Sbjct: 2216 ggtcctcgtggtgcacctggtga 2238
>gb|AE014298.4| Drosophila melanogaster chromosome X, complete sequence Length = 22422827 Score = 44.1 bits (22), Expect = 0.77 Identities = 61/74 (82%) Strand = Plus / Plus Query: 277 tactattggtacctcaccaacgatggcattgagttcctgcgcaacttcctcaacctgccg 336 ||||| ||||||||||||||||| || || ||| ||||||| || |||| |||||||| Sbjct: 19492659 tactactggtacctcaccaacgagggaatcgaggagctgcgcagctacctccacctgccg 19492718 Query: 337 tctgagattgtgcc 350 | ||||| ||||| Sbjct: 19492719 cccgagatcgtgcc 19492732
>gb|AC109595.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1212_B02, complete sequence Length = 125650 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Minus Query: 23 cgcgccgccgcctccctctccc 44 |||||||||||||||||||||| Sbjct: 69507 cgcgccgccgcctccctctccc 69486
>ref|NM_167668.1| Drosophila melanogaster Ribosomal protein S10b CG14206-RB, transcript variant B (RpS10b), mRNA Length = 746 Score = 44.1 bits (22), Expect = 0.77 Identities = 61/74 (82%) Strand = Plus / Plus Query: 277 tactattggtacctcaccaacgatggcattgagttcctgcgcaacttcctcaacctgccg 336 ||||| ||||||||||||||||| || || ||| ||||||| || |||| |||||||| Sbjct: 294 tactactggtacctcaccaacgagggaatcgaggagctgcgcagctacctccacctgccg 353 Query: 337 tctgagattgtgcc 350 | ||||| ||||| Sbjct: 354 cccgagatcgtgcc 367
>ref|NM_134480.2| Drosophila melanogaster Ribosomal protein S10b CG14206-RC, transcript variant C (RpS10b), mRNA Length = 731 Score = 44.1 bits (22), Expect = 0.77 Identities = 61/74 (82%) Strand = Plus / Plus Query: 277 tactattggtacctcaccaacgatggcattgagttcctgcgcaacttcctcaacctgccg 336 ||||| ||||||||||||||||| || || ||| ||||||| || |||| |||||||| Sbjct: 279 tactactggtacctcaccaacgagggaatcgaggagctgcgcagctacctccacctgccg 338 Query: 337 tctgagattgtgcc 350 | ||||| ||||| Sbjct: 339 cccgagatcgtgcc 352
>gb|AY070896.1| Drosophila melanogaster LP04958 full insert cDNA Length = 1020 Score = 44.1 bits (22), Expect = 0.77 Identities = 61/74 (82%) Strand = Plus / Plus Query: 277 tactattggtacctcaccaacgatggcattgagttcctgcgcaacttcctcaacctgccg 336 ||||| ||||||||||||||||| || || ||| ||||||| || |||| |||||||| Sbjct: 548 tactactggtacctcaccaacgagggaatcgaggagctgcgcagctacctccacctgccg 607 Query: 337 tctgagattgtgcc 350 | ||||| ||||| Sbjct: 608 cccgagatcgtgcc 621
>dbj|AK045503.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230207K24 product:hypothetical protein, full insert sequence Length = 2338 Score = 44.1 bits (22), Expect = 0.77 Identities = 25/26 (96%) Strand = Plus / Plus Query: 197 tgccgaacctccaggtgatcaagctc 222 ||||| |||||||||||||||||||| Sbjct: 352 tgccgtacctccaggtgatcaagctc 377
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Minus Query: 23 cgcgccgccgcctccctctccc 44 |||||||||||||||||||||| Sbjct: 20647467 cgcgccgccgcctccctctccc 20647446
>gb|AE009807.1|AE009807 Pyrobaculum aerophilum strain IM2 section 62 of 201 of the complete genome Length = 13357 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Minus Query: 14 tttctccctcgcgccgccgcct 35 |||||||||||||||||||||| Sbjct: 6286 tttctccctcgcgccgccgcct 6265
>gb|AC010847.11|AC010847 Drosophila melanogaster, chromosome X, region 18D-18D, BAC clone BACR10M08, complete sequence Length = 180213 Score = 44.1 bits (22), Expect = 0.77 Identities = 61/74 (82%) Strand = Plus / Plus Query: 277 tactattggtacctcaccaacgatggcattgagttcctgcgcaacttcctcaacctgccg 336 ||||| ||||||||||||||||| || || ||| ||||||| || |||| |||||||| Sbjct: 139776 tactactggtacctcaccaacgagggaatcgaggagctgcgcagctacctccacctgccg 139835 Query: 337 tctgagattgtgcc 350 | ||||| ||||| Sbjct: 139836 cccgagatcgtgcc 139849
>dbj|AB025606.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F6N7 Length = 74282 Score = 44.1 bits (22), Expect = 0.77 Identities = 76/94 (80%) Strand = Plus / Minus Query: 193 gatgtgccgaacctccaggtgatcaagctcatgcagagcttcaagtctaaggaatacgtc 252 ||||| || ||||| || ||||| ||||| |||||||| ||||| || ||||| || || Sbjct: 35924 gatgtccccaacctacaagtgattaagcttatgcagagtttcaaatccaaggagtatgtt 35865 Query: 253 agggagaccttctcgtggcagcattactattggt 286 |||||||| || | ||| |||||||||||||| Sbjct: 35864 agggagacatttgcctggatgcattactattggt 35831
>dbj|AB015476.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNC6 Length = 82952 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Minus Query: 746 acatatctataatatgctatct 767 |||||||||||||||||||||| Sbjct: 64928 acatatctataatatgctatct 64907
>gb|CP000113.1| Myxococcus xanthus DK 1622, complete genome Length = 9139763 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 acccgcgccgcccaccatgat 92 ||||||||||||||||||||| Sbjct: 1932570 acccgcgccgcccaccatgat 1932590
>gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046A04, complete sequence Length = 141001 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 20 cctcgcgccgccgcctccctc 40 ||||||||||||||||||||| Sbjct: 112390 cctcgcgccgccgcctccctc 112410
>gb|AC115718.14| Mus musculus chromosome 8, clone RP23-247P3, complete sequence Length = 232751 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 768 taattcaatccagtaaaatag 788 ||||||||||||||||||||| Sbjct: 58347 taattcaatccagtaaaatag 58327
>gb|AC121275.20| Mus musculus chromosome 8, clone RP24-234C3, complete sequence Length = 158075 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 768 taattcaatccagtaaaatag 788 ||||||||||||||||||||| Sbjct: 44678 taattcaatccagtaaaatag 44698
>gb|AC105075.6| Mus musculus chromosome 1, clone RP23-366P11, complete sequence Length = 195511 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 712 tttatgtagtgatgtttgcaa 732 ||||||||||||||||||||| Sbjct: 186379 tttatgtagtgatgtttgcaa 186359
>gb|AC113406.2| Homo sapiens chromosome 5 clone RP11-471O19, complete sequence Length = 147183 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 766 cttaattcaatccagtaaaat 786 ||||||||||||||||||||| Sbjct: 90906 cttaattcaatccagtaaaat 90886
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 20 cctcgcgccgccgcctccctc 40 ||||||||||||||||||||| Sbjct: 11910663 cctcgcgccgccgcctccctc 11910683
>gb|AC020982.6| Homo sapiens chromosome 5 clone RP1-255M24, complete sequence Length = 137703 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 766 cttaattcaatccagtaaaat 786 ||||||||||||||||||||| Sbjct: 64173 cttaattcaatccagtaaaat 64193
>dbj|AB049721.2| Pisum sativum ssa-11 mRNA for putative senescence-associated protein, complete cds Length = 1000 Score = 42.1 bits (21), Expect = 3.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 403 ccacctggtgatcgcccgagggggccacctcgttttgaggg 443 ||||||||||||||||| || || |||||||| || ||||| Sbjct: 385 ccacctggtgatcgccctagaggcccacctcgattcgaggg 345
>emb|BX829499.1|CNS0A1BF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB17ZG05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 592 Score = 42.1 bits (21), Expect = 3.0 Identities = 69/85 (81%) Strand = Plus / Plus Query: 202 aacctccaggtgatcaagctcatgcagagcttcaagtctaaggaatacgtcagggagacc 261 ||||| || ||||| ||||| |||||||| ||||| || ||||| || || |||||||| Sbjct: 12 aacctacaagtgattaagcttatgcagagtttcaaatccaaggagtatgttagggagaca 71 Query: 262 ttctcgtggcagcattactattggt 286 || | ||| |||||||||||||| Sbjct: 72 tttgcctggatgcattactattggt 96
>ref|NM_001033686.1| Rattus norvegicus cytochrome P450, family 4, subfamily f, polypeptide 18 (Cyp4f18), mRNA gb|BC101918.1| Rattus norvegicus cytochrome P450, family 4, subfamily f, polypeptide 18, mRNA (cDNA clone MGC:124833 IMAGE:7935301), complete cds Length = 2811 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 166 tacaacctggcgaagcacccg 186 ||||||||||||||||||||| Sbjct: 1050 tacaacctggcgaagcacccg 1070 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 119,166,505 Number of extensions: 6393236 Number of successful extensions: 122657 Number of sequences better than 10.0: 81 Number of HSP's gapped: 122643 Number of HSP's successfully gapped: 119 Length of query: 810 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 788 Effective length of database: 18,508,616,841 Effective search space: 14584790070708 Effective search space used: 14584790070708 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
