ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf33i23
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q1M3A7:GLGB2_RHIL3 1,4-alpha-glucan-branching enzyme 2 - Rhizobi... 35 2.6

>Q1M3A7:GLGB2_RHIL3 1,4-alpha-glucan-branching enzyme 2 - Rhizobium leguminosarum bv.|
            viciae (strain 3841)
          Length = 736
 Score = 35.0 bits (79), Expect = 2.6
 Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 7/97 (7%)
 Frame = +2

Query: 2642 VYDYED-EEGFLVGWRTMLEKYDLRNNEWLHEFFKDRDKWASAYNQHVFTADIKSSLQLE 2818
            +Y++ED  EGF   W T++  Y+L  NE          +W   Y+      D  +S+   
Sbjct: 366  LYEHEDPREGFHRDWNTLI--YNLGRNEVKGFLIASALEWLERYHIDGLRVDAVASMLYR 423

Query: 2819 SVSNVLRKYLSPQF------DFLSFFKHYERVLDESC 2911
              S    +++  Q+      + + FFKH   ++ E C
Sbjct: 424  DYSRNEGEWIPNQYGGRENLEAVEFFKHLNSIIHERC 460


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 678,349,685
Number of extensions: 14214826
Number of successful extensions: 30947
Number of sequences better than 10.0: 1
Number of HSP's gapped: 30927
Number of HSP's successfully gapped: 1
Length of query: 1381
Length of database: 100,686,439
Length adjustment: 126
Effective length of query: 1255
Effective length of database: 66,125,269
Effective search space: 82987212595
Effective search space used: 82987212595
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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