| Clone Name | FLbaf33i23 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001055706.1| Oryza sativa (japonica cultivar-group) Os03g0181600 (Os03g0181600) mRNA, complete cds Length = 3098 Score = 402 bits (203), Expect = e-108 Identities = 487/579 (84%), Gaps = 2/579 (0%) Strand = Plus / Plus Query: 1915 aaccaccagccagcacccccctctaccatgcatatgctgagatctcagagggtggttact 1974 ||||| |||||||||||||| || ||||||||||||||||| |||||||| || | ||| Sbjct: 1040 aaccatcagccagcacccccatcaaccatgcatatgctgaggtctcagagagtactcact 1099 Query: 1975 gaggtagaaagaactgaatgcgactcctcagaagattccacaacaccgtcaagtttttct 2034 ||| | ||| ||||||| |||||||||||||| || | ||||| ||||| |||||| Sbjct: 1100 gagctgcaaacaactgaagcagactcctcagaagaatcagcgacaccatcaaggttttct 1159 Query: 2035 ggtgtctctttagtacagcaggcaggagcttttagaaatgttaaat-tctccctgcagat 2093 || |||||| || |||| |||| || ||||| || || | |||||||||||| Sbjct: 1160 agttgctctttggtgaagcaagcagaagtaattagacataccaattttctccctgcagaa 1219 Query: 2094 tacagaagttccctttgttcaaagcgtatgaacaatatgcaacctggtgatgcaggaggt 2153 ||||| | || |||||||||||||| | ||| ||||||||||||||||||||||||| Sbjct: 1220 tacaggtgctctctttgttcaaagcgcaagaaaaatatgcaacctggtgatgcaggagta 1279 Query: 2154 gttgtgaagtacctacagagcatgcagttaaacaattcgtctttcttttatgctgtccag 2213 ||| |||||||| || ||||||||| ||| ||| | ||||||||||||||||||||| Sbjct: 1280 actgtaaagtacctgcaaagcatgcagctaagcaacccttctttcttttatgctgtccag 1339 Query: 2214 ctcgacgaggatgacaaactgaccaatattttctgggccgattccaaatctagagttgat 2273 || || ||||||||||||||||| || ||||||||||||||||||||||||||| || Sbjct: 1340 cttgatgaggatgacaaactgacaaacattttctgggccgattccaaatctagaaccgac 1399 Query: 2274 ttcagctacttcagtgacgtggtttgtttggacac-acctacaagataaatgcacatgga 2332 |||||||||| |||||||||||||||||||||||| |||||||||||||||| |||| | Sbjct: 1400 ttcagctactacagtgacgtggtttgtttggacacaacctacaagataaatgaacatagc 1459 Query: 2333 aggccattaactctcttccttggagtgaatcatcacaagcaaatttccatatttggcgct 2392 || |||||||| || |||||||||||||| || ||||||||||| ||||||||||| ||| Sbjct: 1460 agaccattaacactattccttggagtgaaccaccacaagcaaatctccatatttggtgct 1519 Query: 2393 gctttgctttatgatgaatcagtggaatcgttcaagtggttgtttgacatgttcaagatc 2452 || ||||||||||||||||||| || || ||||||||| | ||||| | |||||||| Sbjct: 1520 gccttgctttatgatgaatcagaagagtctttcaagtggctatttgatacattcaagatt 1579 Query: 2453 gctacagatggaaagcagccaaaaacaatcttgacagat 2491 ||| || |||||||||| ||||||||||||||||||||| Sbjct: 1580 gctgcaaatggaaagcaaccaaaaacaatcttgacagat 1618 Score = 216 bits (109), Expect = 5e-52 Identities = 286/345 (82%) Strand = Plus / Plus Query: 2549 ctttgcccatggcaagtgtaccaaaatactgtcaaacaccttaatcacatcttccaaggc 2608 ||||| |||||||||||||||||||| ||||||| ||||||||||||||||| |||||| Sbjct: 1682 ctttgtccatggcaagtgtaccaaaactctgtcaagcaccttaatcacatctttcaaggc 1741 Query: 2609 gctaaaacatttgcaaaggatttcagcagatgtgtctatgattatgaggatgaagagggt 2668 | ||||||||||||||||||||| | | ||| || ||||| || || ||||||||| Sbjct: 1742 tccaaaacatttgcaaaggatttcggaaaatgcgtttatgactacgatgatgaagagaac 1801 Query: 2669 ttcttggtaggatggagaaccatgctagagaagtatgatctaagaaacaatgaatggctt 2728 |||||| | ||||||| || ||||||||||||||||||||| |||||||||| ||| || Sbjct: 1802 ttcttgcttggatggaatactatgctagagaagtatgatctacgaaacaatgagtggatt 1861 Query: 2729 catgagttcttcaaagatcgagataaatgggcatcagcgtacaatcaacatgtattcacc 2788 | | | || | ||||| ||||||||| | ||| ||||||| ||||||||||| Sbjct: 1862 aaaaaaatatttgatgatcgtgataaatggtctccagtatacaatcgccatgtattcact 1921 Query: 2789 gcagatataaaaagttcattgcagttagaaagtgttagcaatgtcttgagaaagtacctg 2848 ||||||||||||||||| ||||||| ||||||||||| |||| ||||| |||| | || Sbjct: 1922 gcagatataaaaagttctttgcagtcggaaagtgttagaaatgccttgaagaagtccttg 1981 Query: 2849 agtccacagtttgatttcttgtctttcttcaagcactatgaaaga 2893 |||||||| ||||| | || |||||||| ||||||||||||||| Sbjct: 1982 agtccacaatttgacctgttatctttctttaagcactatgaaaga 2026
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 402 bits (203), Expect = e-108 Identities = 487/579 (84%), Gaps = 2/579 (0%) Strand = Plus / Plus Query: 1915 aaccaccagccagcacccccctctaccatgcatatgctgagatctcagagggtggttact 1974 ||||| |||||||||||||| || ||||||||||||||||| |||||||| || | ||| Sbjct: 4256592 aaccatcagccagcacccccatcaaccatgcatatgctgaggtctcagagagtactcact 4256651 Query: 1975 gaggtagaaagaactgaatgcgactcctcagaagattccacaacaccgtcaagtttttct 2034 ||| | ||| ||||||| |||||||||||||| || | ||||| ||||| |||||| Sbjct: 4256652 gagctgcaaacaactgaagcagactcctcagaagaatcagcgacaccatcaaggttttct 4256711 Query: 2035 ggtgtctctttagtacagcaggcaggagcttttagaaatgttaaat-tctccctgcagat 2093 || |||||| || |||| |||| || ||||| || || | |||||||||||| Sbjct: 4256712 agttgctctttggtgaagcaagcagaagtaattagacataccaattttctccctgcagaa 4256771 Query: 2094 tacagaagttccctttgttcaaagcgtatgaacaatatgcaacctggtgatgcaggaggt 2153 ||||| | || |||||||||||||| | ||| ||||||||||||||||||||||||| Sbjct: 4256772 tacaggtgctctctttgttcaaagcgcaagaaaaatatgcaacctggtgatgcaggagta 4256831 Query: 2154 gttgtgaagtacctacagagcatgcagttaaacaattcgtctttcttttatgctgtccag 2213 ||| |||||||| || ||||||||| ||| ||| | ||||||||||||||||||||| Sbjct: 4256832 actgtaaagtacctgcaaagcatgcagctaagcaacccttctttcttttatgctgtccag 4256891 Query: 2214 ctcgacgaggatgacaaactgaccaatattttctgggccgattccaaatctagagttgat 2273 || || ||||||||||||||||| || ||||||||||||||||||||||||||| || Sbjct: 4256892 cttgatgaggatgacaaactgacaaacattttctgggccgattccaaatctagaaccgac 4256951 Query: 2274 ttcagctacttcagtgacgtggtttgtttggacac-acctacaagataaatgcacatgga 2332 |||||||||| |||||||||||||||||||||||| |||||||||||||||| |||| | Sbjct: 4256952 ttcagctactacagtgacgtggtttgtttggacacaacctacaagataaatgaacatagc 4257011 Query: 2333 aggccattaactctcttccttggagtgaatcatcacaagcaaatttccatatttggcgct 2392 || |||||||| || |||||||||||||| || ||||||||||| ||||||||||| ||| Sbjct: 4257012 agaccattaacactattccttggagtgaaccaccacaagcaaatctccatatttggtgct 4257071 Query: 2393 gctttgctttatgatgaatcagtggaatcgttcaagtggttgtttgacatgttcaagatc 2452 || ||||||||||||||||||| || || ||||||||| | ||||| | |||||||| Sbjct: 4257072 gccttgctttatgatgaatcagaagagtctttcaagtggctatttgatacattcaagatt 4257131 Query: 2453 gctacagatggaaagcagccaaaaacaatcttgacagat 2491 ||| || |||||||||| ||||||||||||||||||||| Sbjct: 4257132 gctgcaaatggaaagcaaccaaaaacaatcttgacagat 4257170 Score = 216 bits (109), Expect = 5e-52 Identities = 286/345 (82%) Strand = Plus / Plus Query: 2549 ctttgcccatggcaagtgtaccaaaatactgtcaaacaccttaatcacatcttccaaggc 2608 ||||| |||||||||||||||||||| ||||||| ||||||||||||||||| |||||| Sbjct: 4257234 ctttgtccatggcaagtgtaccaaaactctgtcaagcaccttaatcacatctttcaaggc 4257293 Query: 2609 gctaaaacatttgcaaaggatttcagcagatgtgtctatgattatgaggatgaagagggt 2668 | ||||||||||||||||||||| | | ||| || ||||| || || ||||||||| Sbjct: 4257294 tccaaaacatttgcaaaggatttcggaaaatgcgtttatgactacgatgatgaagagaac 4257353 Query: 2669 ttcttggtaggatggagaaccatgctagagaagtatgatctaagaaacaatgaatggctt 2728 |||||| | ||||||| || ||||||||||||||||||||| |||||||||| ||| || Sbjct: 4257354 ttcttgcttggatggaatactatgctagagaagtatgatctacgaaacaatgagtggatt 4257413 Query: 2729 catgagttcttcaaagatcgagataaatgggcatcagcgtacaatcaacatgtattcacc 2788 | | | || | ||||| ||||||||| | ||| ||||||| ||||||||||| Sbjct: 4257414 aaaaaaatatttgatgatcgtgataaatggtctccagtatacaatcgccatgtattcact 4257473 Query: 2789 gcagatataaaaagttcattgcagttagaaagtgttagcaatgtcttgagaaagtacctg 2848 ||||||||||||||||| ||||||| ||||||||||| |||| ||||| |||| | || Sbjct: 4257474 gcagatataaaaagttctttgcagtcggaaagtgttagaaatgccttgaagaagtccttg 4257533 Query: 2849 agtccacagtttgatttcttgtctttcttcaagcactatgaaaga 2893 |||||||| ||||| | || |||||||| ||||||||||||||| Sbjct: 4257534 agtccacaatttgacctgttatctttctttaagcactatgaaaga 4257578 Score = 63.9 bits (32), Expect = 4e-06 Identities = 53/60 (88%) Strand = Plus / Minus Query: 2380 catatttggcgctgctttgctttatgatgaatcagtggaatcgttcaagtggttgtttga 2439 ||||||||| || || ||| |||||||||||||||| ||||| ||||| ||||||||||| Sbjct: 32040972 catatttggtgcagcattggtttatgatgaatcagttgaatccttcaaatggttgtttga 32040913
>dbj|AK067807.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120L22, full insert sequence Length = 3099 Score = 402 bits (203), Expect = e-108 Identities = 487/579 (84%), Gaps = 2/579 (0%) Strand = Plus / Plus Query: 1915 aaccaccagccagcacccccctctaccatgcatatgctgagatctcagagggtggttact 1974 ||||| |||||||||||||| || ||||||||||||||||| |||||||| || | ||| Sbjct: 1041 aaccatcagccagcacccccatcaaccatgcatatgctgaggtctcagagagtactcact 1100 Query: 1975 gaggtagaaagaactgaatgcgactcctcagaagattccacaacaccgtcaagtttttct 2034 ||| | ||| ||||||| |||||||||||||| || | ||||| ||||| |||||| Sbjct: 1101 gagctgcaaacaactgaagcagactcctcagaagaatcagcgacaccatcaaggttttct 1160 Query: 2035 ggtgtctctttagtacagcaggcaggagcttttagaaatgttaaat-tctccctgcagat 2093 || |||||| || |||| |||| || ||||| || || | |||||||||||| Sbjct: 1161 agttgctctttggtgaagcaagcagaagtaattagacataccaattttctccctgcagaa 1220 Query: 2094 tacagaagttccctttgttcaaagcgtatgaacaatatgcaacctggtgatgcaggaggt 2153 ||||| | || |||||||||||||| | ||| ||||||||||||||||||||||||| Sbjct: 1221 tacaggtgctctctttgttcaaagcgcaagaaaaatatgcaacctggtgatgcaggagta 1280 Query: 2154 gttgtgaagtacctacagagcatgcagttaaacaattcgtctttcttttatgctgtccag 2213 ||| |||||||| || ||||||||| ||| ||| | ||||||||||||||||||||| Sbjct: 1281 actgtaaagtacctgcaaagcatgcagctaagcaacccttctttcttttatgctgtccag 1340 Query: 2214 ctcgacgaggatgacaaactgaccaatattttctgggccgattccaaatctagagttgat 2273 || || ||||||||||||||||| || ||||||||||||||||||||||||||| || Sbjct: 1341 cttgatgaggatgacaaactgacaaacattttctgggccgattccaaatctagaaccgac 1400 Query: 2274 ttcagctacttcagtgacgtggtttgtttggacac-acctacaagataaatgcacatgga 2332 |||||||||| |||||||||||||||||||||||| |||||||||||||||| |||| | Sbjct: 1401 ttcagctactacagtgacgtggtttgtttggacacaacctacaagataaatgaacatagc 1460 Query: 2333 aggccattaactctcttccttggagtgaatcatcacaagcaaatttccatatttggcgct 2392 || |||||||| || |||||||||||||| || ||||||||||| ||||||||||| ||| Sbjct: 1461 agaccattaacactattccttggagtgaaccaccacaagcaaatctccatatttggtgct 1520 Query: 2393 gctttgctttatgatgaatcagtggaatcgttcaagtggttgtttgacatgttcaagatc 2452 || ||||||||||||||||||| || || ||||||||| | ||||| | |||||||| Sbjct: 1521 gccttgctttatgatgaatcagaagagtctttcaagtggctatttgatacattcaagatt 1580 Query: 2453 gctacagatggaaagcagccaaaaacaatcttgacagat 2491 ||| || |||||||||| ||||||||||||||||||||| Sbjct: 1581 gctgcaaatggaaagcaaccaaaaacaatcttgacagat 1619 Score = 216 bits (109), Expect = 5e-52 Identities = 286/345 (82%) Strand = Plus / Plus Query: 2549 ctttgcccatggcaagtgtaccaaaatactgtcaaacaccttaatcacatcttccaaggc 2608 ||||| |||||||||||||||||||| ||||||| ||||||||||||||||| |||||| Sbjct: 1683 ctttgtccatggcaagtgtaccaaaactctgtcaagcaccttaatcacatctttcaaggc 1742 Query: 2609 gctaaaacatttgcaaaggatttcagcagatgtgtctatgattatgaggatgaagagggt 2668 | ||||||||||||||||||||| | | ||| || ||||| || || ||||||||| Sbjct: 1743 tccaaaacatttgcaaaggatttcggaaaatgcgtttatgactacgatgatgaagagaac 1802 Query: 2669 ttcttggtaggatggagaaccatgctagagaagtatgatctaagaaacaatgaatggctt 2728 |||||| | ||||||| || ||||||||||||||||||||| |||||||||| ||| || Sbjct: 1803 ttcttgcttggatggaatactatgctagagaagtatgatctacgaaacaatgagtggatt 1862 Query: 2729 catgagttcttcaaagatcgagataaatgggcatcagcgtacaatcaacatgtattcacc 2788 | | | || | ||||| ||||||||| | ||| ||||||| ||||||||||| Sbjct: 1863 aaaaaaatatttgatgatcgtgataaatggtctccagtatacaatcgccatgtattcact 1922 Query: 2789 gcagatataaaaagttcattgcagttagaaagtgttagcaatgtcttgagaaagtacctg 2848 ||||||||||||||||| ||||||| ||||||||||| |||| ||||| |||| | || Sbjct: 1923 gcagatataaaaagttctttgcagtcggaaagtgttagaaatgccttgaagaagtccttg 1982 Query: 2849 agtccacagtttgatttcttgtctttcttcaagcactatgaaaga 2893 |||||||| ||||| | || |||||||| ||||||||||||||| Sbjct: 1983 agtccacaatttgacctgttatctttctttaagcactatgaaaga 2027
>gb|AC126223.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0076N15, complete sequence Length = 134307 Score = 402 bits (203), Expect = e-108 Identities = 487/579 (84%), Gaps = 2/579 (0%) Strand = Plus / Plus Query: 1915 aaccaccagccagcacccccctctaccatgcatatgctgagatctcagagggtggttact 1974 ||||| |||||||||||||| || ||||||||||||||||| |||||||| || | ||| Sbjct: 85092 aaccatcagccagcacccccatcaaccatgcatatgctgaggtctcagagagtactcact 85151 Query: 1975 gaggtagaaagaactgaatgcgactcctcagaagattccacaacaccgtcaagtttttct 2034 ||| | ||| ||||||| |||||||||||||| || | ||||| ||||| |||||| Sbjct: 85152 gagctgcaaacaactgaagcagactcctcagaagaatcagcgacaccatcaaggttttct 85211 Query: 2035 ggtgtctctttagtacagcaggcaggagcttttagaaatgttaaat-tctccctgcagat 2093 || |||||| || |||| |||| || ||||| || || | |||||||||||| Sbjct: 85212 agttgctctttggtgaagcaagcagaagtaattagacataccaattttctccctgcagaa 85271 Query: 2094 tacagaagttccctttgttcaaagcgtatgaacaatatgcaacctggtgatgcaggaggt 2153 ||||| | || |||||||||||||| | ||| ||||||||||||||||||||||||| Sbjct: 85272 tacaggtgctctctttgttcaaagcgcaagaaaaatatgcaacctggtgatgcaggagta 85331 Query: 2154 gttgtgaagtacctacagagcatgcagttaaacaattcgtctttcttttatgctgtccag 2213 ||| |||||||| || ||||||||| ||| ||| | ||||||||||||||||||||| Sbjct: 85332 actgtaaagtacctgcaaagcatgcagctaagcaacccttctttcttttatgctgtccag 85391 Query: 2214 ctcgacgaggatgacaaactgaccaatattttctgggccgattccaaatctagagttgat 2273 || || ||||||||||||||||| || ||||||||||||||||||||||||||| || Sbjct: 85392 cttgatgaggatgacaaactgacaaacattttctgggccgattccaaatctagaaccgac 85451 Query: 2274 ttcagctacttcagtgacgtggtttgtttggacac-acctacaagataaatgcacatgga 2332 |||||||||| |||||||||||||||||||||||| |||||||||||||||| |||| | Sbjct: 85452 ttcagctactacagtgacgtggtttgtttggacacaacctacaagataaatgaacatagc 85511 Query: 2333 aggccattaactctcttccttggagtgaatcatcacaagcaaatttccatatttggcgct 2392 || |||||||| || |||||||||||||| || ||||||||||| ||||||||||| ||| Sbjct: 85512 agaccattaacactattccttggagtgaaccaccacaagcaaatctccatatttggtgct 85571 Query: 2393 gctttgctttatgatgaatcagtggaatcgttcaagtggttgtttgacatgttcaagatc 2452 || ||||||||||||||||||| || || ||||||||| | ||||| | |||||||| Sbjct: 85572 gccttgctttatgatgaatcagaagagtctttcaagtggctatttgatacattcaagatt 85631 Query: 2453 gctacagatggaaagcagccaaaaacaatcttgacagat 2491 ||| || |||||||||| ||||||||||||||||||||| Sbjct: 85632 gctgcaaatggaaagcaaccaaaaacaatcttgacagat 85670 Score = 216 bits (109), Expect = 5e-52 Identities = 286/345 (82%) Strand = Plus / Plus Query: 2549 ctttgcccatggcaagtgtaccaaaatactgtcaaacaccttaatcacatcttccaaggc 2608 ||||| |||||||||||||||||||| ||||||| ||||||||||||||||| |||||| Sbjct: 85734 ctttgtccatggcaagtgtaccaaaactctgtcaagcaccttaatcacatctttcaaggc 85793 Query: 2609 gctaaaacatttgcaaaggatttcagcagatgtgtctatgattatgaggatgaagagggt 2668 | ||||||||||||||||||||| | | ||| || ||||| || || ||||||||| Sbjct: 85794 tccaaaacatttgcaaaggatttcggaaaatgcgtttatgactacgatgatgaagagaac 85853 Query: 2669 ttcttggtaggatggagaaccatgctagagaagtatgatctaagaaacaatgaatggctt 2728 |||||| | ||||||| || ||||||||||||||||||||| |||||||||| ||| || Sbjct: 85854 ttcttgcttggatggaatactatgctagagaagtatgatctacgaaacaatgagtggatt 85913 Query: 2729 catgagttcttcaaagatcgagataaatgggcatcagcgtacaatcaacatgtattcacc 2788 | | | || | ||||| ||||||||| | ||| ||||||| ||||||||||| Sbjct: 85914 aaaaaaatatttgatgatcgtgataaatggtctccagtatacaatcgccatgtattcact 85973 Query: 2789 gcagatataaaaagttcattgcagttagaaagtgttagcaatgtcttgagaaagtacctg 2848 ||||||||||||||||| ||||||| ||||||||||| |||| ||||| |||| | || Sbjct: 85974 gcagatataaaaagttctttgcagtcggaaagtgttagaaatgccttgaagaagtccttg 86033 Query: 2849 agtccacagtttgatttcttgtctttcttcaagcactatgaaaga 2893 |||||||| ||||| | || |||||||| ||||||||||||||| Sbjct: 86034 agtccacaatttgacctgttatctttctttaagcactatgaaaga 86078
>dbj|AK101197.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030K10, full insert sequence Length = 1881 Score = 383 bits (193), Expect = e-102 Identities = 359/413 (86%), Gaps = 1/413 (0%) Strand = Plus / Plus Query: 2080 ttctccctgcagattacagaagttccctttgttcaaagcgtatgaacaatatgcaacctg 2139 ||||||||||||| ||||| | || |||||||||||||| | ||| ||||||||||||| Sbjct: 1210 ttctccctgcagaatacaggtgctctctttgttcaaagcgcaagaaaaatatgcaacctg 1269 Query: 2140 gtgatgcaggaggtgttgtgaagtacctacagagcatgcagttaaacaattcgtctttct 2199 |||||||||||| ||| |||||||| || ||||||||| ||| ||| | ||||||| Sbjct: 1270 gtgatgcaggagtaactgtaaagtacctgcaaagcatgcagctaagcaacccttctttct 1329 Query: 2200 tttatgctgtccagctcgacgaggatgacaaactgaccaatattttctgggccgattcca 2259 |||||||||||||||| || ||||||||||||||||| || ||||||||||||||||||| Sbjct: 1330 tttatgctgtccagcttgatgaggatgacaaactgacaaacattttctgggccgattcca 1389 Query: 2260 aatctagagttgatttcagctacttcagtgacgtggtttgtttggacaca-cctacaaga 2318 |||||||| || |||||||||| ||||||||||||||||||||||||| ||||||||| Sbjct: 1390 aatctagaaccgacttcagctactacagtgacgtggtttgtttggacacaacctacaaga 1449 Query: 2319 taaatgcacatggaaggccattaactctcttccttggagtgaatcatcacaagcaaattt 2378 |||||| |||| | || |||||||| || |||||||||||||| || ||||||||||| | Sbjct: 1450 taaatgaacatagcagaccattaacactattccttggagtgaaccaccacaagcaaatct 1509 Query: 2379 ccatatttggcgctgctttgctttatgatgaatcagtggaatcgttcaagtggttgtttg 2438 |||||||||| ||||| ||||||||||||||||||| || || ||||||||| | |||| Sbjct: 1510 ccatatttggtgctgccttgctttatgatgaatcagaagagtctttcaagtggctatttg 1569 Query: 2439 acatgttcaagatcgctacagatggaaagcagccaaaaacaatcttgacagat 2491 | | |||||||| ||| || |||||||||| ||||||||||||||||||||| Sbjct: 1570 atacattcaagattgctgcaaatggaaagcaaccaaaaacaatcttgacagat 1622 Score = 153 bits (77), Expect = 6e-33 Identities = 149/173 (86%) Strand = Plus / Plus Query: 2549 ctttgcccatggcaagtgtaccaaaatactgtcaaacaccttaatcacatcttccaaggc 2608 ||||| |||||||||||||||||||| ||||||| ||||||||||||||||| |||||| Sbjct: 1686 ctttgtccatggcaagtgtaccaaaactctgtcaagcaccttaatcacatctttcaaggc 1745 Query: 2609 gctaaaacatttgcaaaggatttcagcagatgtgtctatgattatgaggatgaagagggt 2668 | ||||||||||||||||||||| | | ||| || ||||| || || ||||||||| Sbjct: 1746 tccaaaacatttgcaaaggatttcggaaaatgcgtttatgactacgatgatgaagagaac 1805 Query: 2669 ttcttggtaggatggagaaccatgctagagaagtatgatctaagaaacaatga 2721 |||||| | ||||||| || ||||||||||||||||||||| |||||||||| Sbjct: 1806 ttcttgcttggatggaatactatgctagagaagtatgatctacgaaacaatga 1858 Score = 67.9 bits (34), Expect = 3e-07 Identities = 46/50 (92%) Strand = Plus / Plus Query: 1915 aaccaccagccagcacccccctctaccatgcatatgctgagatctcagag 1964 ||||| |||||||||||||| || ||||||||||||||||| |||||||| Sbjct: 1044 aaccatcagccagcacccccatcaaccatgcatatgctgaggtctcagag 1093
>ref|NM_001066807.1| Oryza sativa (japonica cultivar-group) Os07g0615900 (Os07g0615900) mRNA, complete cds Length = 3196 Score = 73.8 bits (37), Expect = 5e-09 Identities = 103/125 (82%) Strand = Plus / Plus Query: 2585 caccttaatcacatcttccaaggcgctaaaacatttgcaaaggatttcagcagatgtgtc 2644 ||||||||||| | |||||||| | |||||||||||||||||||| ||||||||||| Sbjct: 1483 caccttaatcatgttttccaaggttcaaaaacatttgcaaaggattttagcagatgtgta 1542 Query: 2645 tatgattatgaggatgaagagggtttcttggtaggatggagaaccatgctagagaagtat 2704 | || |||||||| || || | |||||| | | ||||||| ||||||||| |||||| Sbjct: 1543 tttggctatgaggaagaggaagaattcttgtttgcctggagaagcatgctagaaaagtat 1602 Query: 2705 gatct 2709 ||||| Sbjct: 1603 gatct 1607
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 73.8 bits (37), Expect = 5e-09 Identities = 103/125 (82%) Strand = Plus / Plus Query: 2585 caccttaatcacatcttccaaggcgctaaaacatttgcaaaggatttcagcagatgtgtc 2644 ||||||||||| | |||||||| | |||||||||||||||||||| ||||||||||| Sbjct: 25320426 caccttaatcatgttttccaaggttcaaaaacatttgcaaaggattttagcagatgtgta 25320485 Query: 2645 tatgattatgaggatgaagagggtttcttggtaggatggagaaccatgctagagaagtat 2704 | || |||||||| || || | |||||| | | ||||||| ||||||||| |||||| Sbjct: 25320486 tttggctatgaggaagaggaagaattcttgtttgcctggagaagcatgctagaaaagtat 25320545 Query: 2705 gatct 2709 ||||| Sbjct: 25320546 gatct 25320550
>dbj|AP005198.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0616D06 Length = 153800 Score = 73.8 bits (37), Expect = 5e-09 Identities = 103/125 (82%) Strand = Plus / Plus Query: 2585 caccttaatcacatcttccaaggcgctaaaacatttgcaaaggatttcagcagatgtgtc 2644 ||||||||||| | |||||||| | |||||||||||||||||||| ||||||||||| Sbjct: 137097 caccttaatcatgttttccaaggttcaaaaacatttgcaaaggattttagcagatgtgta 137156 Query: 2645 tatgattatgaggatgaagagggtttcttggtaggatggagaaccatgctagagaagtat 2704 | || |||||||| || || | |||||| | | ||||||| ||||||||| |||||| Sbjct: 137157 tttggctatgaggaagaggaagaattcttgtttgcctggagaagcatgctagaaaagtat 137216 Query: 2705 gatct 2709 ||||| Sbjct: 137217 gatct 137221
>dbj|AP004988.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1056G08 Length = 168173 Score = 73.8 bits (37), Expect = 5e-09 Identities = 103/125 (82%) Strand = Plus / Plus Query: 2585 caccttaatcacatcttccaaggcgctaaaacatttgcaaaggatttcagcagatgtgtc 2644 ||||||||||| | |||||||| | |||||||||||||||||||| ||||||||||| Sbjct: 13516 caccttaatcatgttttccaaggttcaaaaacatttgcaaaggattttagcagatgtgta 13575 Query: 2645 tatgattatgaggatgaagagggtttcttggtaggatggagaaccatgctagagaagtat 2704 | || |||||||| || || | |||||| | | ||||||| ||||||||| |||||| Sbjct: 13576 tttggctatgaggaagaggaagaattcttgtttgcctggagaagcatgctagaaaagtat 13635 Query: 2705 gatct 2709 ||||| Sbjct: 13636 gatct 13640
>dbj|AK073803.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068D01, full insert sequence Length = 2605 Score = 73.8 bits (37), Expect = 5e-09 Identities = 103/125 (82%) Strand = Plus / Plus Query: 2585 caccttaatcacatcttccaaggcgctaaaacatttgcaaaggatttcagcagatgtgtc 2644 ||||||||||| | |||||||| | |||||||||||||||||||| ||||||||||| Sbjct: 1517 caccttaatcatgttttccaaggttcaaaaacatttgcaaaggattttagcagatgtgta 1576 Query: 2645 tatgattatgaggatgaagagggtttcttggtaggatggagaaccatgctagagaagtat 2704 | || |||||||| || || | |||||| | | ||||||| ||||||||| |||||| Sbjct: 1577 tttggctatgaggaagaggaagaattcttgtttgcctggagaagcatgctagaaaagtat 1636 Query: 2705 gatct 2709 ||||| Sbjct: 1637 gatct 1641
>dbj|AK066317.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013064I12, full insert sequence Length = 3200 Score = 73.8 bits (37), Expect = 5e-09 Identities = 103/125 (82%) Strand = Plus / Plus Query: 2585 caccttaatcacatcttccaaggcgctaaaacatttgcaaaggatttcagcagatgtgtc 2644 ||||||||||| | |||||||| | |||||||||||||||||||| ||||||||||| Sbjct: 1486 caccttaatcatgttttccaaggttcaaaaacatttgcaaaggattttagcagatgtgta 1545 Query: 2645 tatgattatgaggatgaagagggtttcttggtaggatggagaaccatgctagagaagtat 2704 | || |||||||| || || | |||||| | | ||||||| ||||||||| |||||| Sbjct: 1546 tttggctatgaggaagaggaagaattcttgtttgcctggagaagcatgctagaaaagtat 1605 Query: 2705 gatct 2709 ||||| Sbjct: 1606 gatct 1610
>ref|NM_001057977.1| Oryza sativa (japonica cultivar-group) Os03g0777700 (Os03g0777700) mRNA, partial cds Length = 2588 Score = 63.9 bits (32), Expect = 4e-06 Identities = 53/60 (88%) Strand = Plus / Plus Query: 2380 catatttggcgctgctttgctttatgatgaatcagtggaatcgttcaagtggttgtttga 2439 ||||||||| || || ||| |||||||||||||||| ||||| ||||| ||||||||||| Sbjct: 770 catatttggtgcagcattggtttatgatgaatcagttgaatccttcaaatggttgtttga 829
>gb|AC084748.11| Oryza sativa chromosome 3 BAC OSJNBa0010I09 genomic sequence, complete sequence Length = 144306 Score = 63.9 bits (32), Expect = 4e-06 Identities = 53/60 (88%) Strand = Plus / Minus Query: 2380 catatttggcgctgctttgctttatgatgaatcagtggaatcgttcaagtggttgtttga 2439 ||||||||| || || ||| |||||||||||||||| ||||| ||||| ||||||||||| Sbjct: 42412 catatttggtgcagcattggtttatgatgaatcagttgaatccttcaaatggttgtttga 42353
>dbj|AK120460.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106N05, full insert sequence Length = 2591 Score = 63.9 bits (32), Expect = 4e-06 Identities = 53/60 (88%) Strand = Plus / Plus Query: 2380 catatttggcgctgctttgctttatgatgaatcagtggaatcgttcaagtggttgtttga 2439 ||||||||| || || ||| |||||||||||||||| ||||| ||||| ||||||||||| Sbjct: 773 catatttggtgcagcattggtttatgatgaatcagttgaatccttcaaatggttgtttga 832
>ref|XM_641432.1| Dictyostelium discoideum AX4 hypothetical protein (DDBDRAFT_0190787) mRNA, complete cds Length = 1815 Score = 50.1 bits (25), Expect = 0.065 Identities = 25/25 (100%) Strand = Plus / Minus Query: 3869 atgatggtgatggtgttctggttca 3893 ||||||||||||||||||||||||| Sbjct: 1623 atgatggtgatggtgttctggttca 1599
>gb|AE014849.1| Plasmodium falciparum 3D7 chromosome 12, section 6 of 9 of the complete sequence Length = 250421 Score = 48.1 bits (24), Expect = 0.26 Identities = 27/28 (96%) Strand = Plus / Plus Query: 1723 atttgaatatgttttatccttttttata 1750 |||||||||||||||||||||| ||||| Sbjct: 182452 atttgaatatgttttatcctttattata 182479
>gb|AC132588.4| Mus musculus BAC clone RP24-258L16 from chromosome 10, complete sequence Length = 136807 Score = 48.1 bits (24), Expect = 0.26 Identities = 24/24 (100%) Strand = Plus / Plus Query: 95 ctccccctcccctcctcccacctc 118 |||||||||||||||||||||||| Sbjct: 18383 ctccccctcccctcctcccacctc 18406
>gb|AC097380.2| Homo sapiens BAC clone RP11-336M17 from 4, complete sequence Length = 71641 Score = 48.1 bits (24), Expect = 0.26 Identities = 27/28 (96%) Strand = Plus / Plus Query: 2638 atgtgtctatgattatgaggatgaagag 2665 ||||||||||||||||||||| |||||| Sbjct: 45273 atgtgtctatgattatgaggaagaagag 45300
>emb|AL731896.10| Mouse DNA sequence from clone RP23-348D11 on chromosome 11 Contains a ribosomal protein L15 (Rpl15) pseudogene and a SNARE protein Ykt (0610042I15Rik) pseudogene, complete sequence Length = 226786 Score = 48.1 bits (24), Expect = 0.26 Identities = 24/24 (100%) Strand = Plus / Minus Query: 3808 gttcattttcttatttactttgta 3831 |||||||||||||||||||||||| Sbjct: 217189 gttcattttcttatttactttgta 217166
>ref|XM_664757.1| Plasmodium berghei strain ANKA hypothetical protein (PB403239.00.0) partial mRNA Length = 183 Score = 48.1 bits (24), Expect = 0.26 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1740 ccttttttataattgtatttttat 1763 |||||||||||||||||||||||| Sbjct: 17 ccttttttataattgtatttttat 40
>gb|AC122293.3| Mus musculus BAC clone RP23-257O9 from 10, complete sequence Length = 209942 Score = 48.1 bits (24), Expect = 0.26 Identities = 24/24 (100%) Strand = Plus / Minus Query: 95 ctccccctcccctcctcccacctc 118 |||||||||||||||||||||||| Sbjct: 19592 ctccccctcccctcctcccacctc 19569
>gb|AC191688.3| Pan troglodytes BAC clone CH251-670G16 from chromosome 18, complete sequence Length = 207614 Score = 46.1 bits (23), Expect = 1.0 Identities = 23/23 (100%) Strand = Plus / Plus Query: 3452 aactttgtttcattaataaaaag 3474 ||||||||||||||||||||||| Sbjct: 34221 aactttgtttcattaataaaaag 34243
>emb|CR356222.24| Zebrafish DNA sequence from clone DKEY-103J14 in linkage group 13, complete sequence Length = 206656 Score = 46.1 bits (23), Expect = 1.0 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1594 tgattttttatgtatttgtacat 1616 ||||||||||||||||||||||| Sbjct: 194541 tgattttttatgtatttgtacat 194563
>gb|AC072051.8| Homo sapiens chromosome , clone RP11-79D21, complete sequence Length = 157284 Score = 46.1 bits (23), Expect = 1.0 Identities = 23/23 (100%) Strand = Plus / Plus Query: 3452 aactttgtttcattaataaaaag 3474 ||||||||||||||||||||||| Sbjct: 143220 aactttgtttcattaataaaaag 143242
>gb|AC159037.2| Pan troglodytes BAC clone CH251-277G20 from chromosome unknown, complete sequence Length = 171362 Score = 46.1 bits (23), Expect = 1.0 Identities = 23/23 (100%) Strand = Plus / Minus Query: 3452 aactttgtttcattaataaaaag 3474 ||||||||||||||||||||||| Sbjct: 35981 aactttgtttcattaataaaaag 35959
>gb|AC157498.2| Pan troglodytes BAC clone CH251-412M6 from chromosome unknown, complete sequence Length = 159994 Score = 46.1 bits (23), Expect = 1.0 Identities = 23/23 (100%) Strand = Plus / Plus Query: 3452 aactttgtttcattaataaaaag 3474 ||||||||||||||||||||||| Sbjct: 91551 aactttgtttcattaataaaaag 91573
>gb|AC112510.9| Homo sapiens 3 BAC RP11-432A8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 192749 Score = 46.1 bits (23), Expect = 1.0 Identities = 26/27 (96%) Strand = Plus / Minus Query: 3398 ccatgtttctatttgtattcctaaaat 3424 |||| |||||||||||||||||||||| Sbjct: 178983 ccatatttctatttgtattcctaaaat 178957
>gb|AY106767.1| Zea mays PCO121032 mRNA sequence Length = 589 Score = 46.1 bits (23), Expect = 1.0 Identities = 26/27 (96%) Strand = Plus / Plus Query: 2868 tgtctttcttcaagcactatgaaagag 2894 |||| |||||||||||||||||||||| Sbjct: 562 tgtccttcttcaagcactatgaaagag 588
>ref|XM_719665.1| Plasmodium yoelii yoelii str. 17XNL ATP-dependent protease la (PY04458) partial mRNA Length = 2340 Score = 46.1 bits (23), Expect = 1.0 Identities = 26/27 (96%) Strand = Plus / Minus Query: 1737 tatccttttttataattgtatttttat 1763 ||||||||||||||||| ||||||||| Sbjct: 391 tatccttttttataattttatttttat 365
>ref|NM_001067515.1| Oryza sativa (japonica cultivar-group) Os08g0143800 (Os08g0143800) mRNA, complete cds Length = 2028 Score = 44.1 bits (22), Expect = 4.0 Identities = 28/30 (93%) Strand = Plus / Plus Query: 2462 ggaaagcagccaaaaacaatcttgacagat 2491 |||||| ||||||||||||| ||||||||| Sbjct: 1147 ggaaagaagccaaaaacaattttgacagat 1176
>emb|AM236081.1| Rhizobium leguminosarum bv. viciae plasmid pRL7 complete genome, strain 3841 Length = 151564 Score = 44.1 bits (22), Expect = 4.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3987 gtagggatgttgatggatggtttcaa 4012 |||||||| ||||||||||||||||| Sbjct: 45862 gtagggatcttgatggatggtttcaa 45887
>gb|AE014298.4| Drosophila melanogaster chromosome X, complete sequence Length = 22422827 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1277 atctatttttaagcatgttatg 1298 |||||||||||||||||||||| Sbjct: 9810560 atctatttttaagcatgttatg 9810539
>dbj|AK228248.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL14-69-L22 Length = 951 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 61 caccaccacctcttcctccacc 82 |||||||||||||||||||||| Sbjct: 778 caccaccacctcttcctccacc 757
>ref|NM_126162.3| Arabidopsis thaliana unknown protein (AT5G67620) mRNA, complete cds Length = 946 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 61 caccaccacctcttcctccacc 82 |||||||||||||||||||||| Sbjct: 778 caccaccacctcttcctccacc 757
>ref|NM_121569.2| Arabidopsis thaliana RGP2; alpha-1,4-glucan-protein synthase (UDP-forming) (RGP2) mRNA, complete cds Length = 1530 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 3454 ctttgtttcattaataaaaagg 3475 |||||||||||||||||||||| Sbjct: 1366 ctttgtttcattaataaaaagg 1387
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 gccgatggccatggcatcctcc 281 |||||||||||||||||||||| Sbjct: 1368977 gccgatggccatggcatcctcc 1368956
>gb|AC119291.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0052K01, complete sequence Length = 144395 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 95 ctccccctcccctcctcccacc 116 |||||||||||||||||||||| Sbjct: 26572 ctccccctcccctcctcccacc 26551
>gb|AY885246.1| Saccharomyces cariocanus beta-fructosidase (SUC) gene, partial cds Length = 1542 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 3859 ttatacttcaatgatggtgatg 3880 |||||||||||||||||||||| Sbjct: 1459 ttatacttcaatgatggtgatg 1480
>gb|AC134586.4| Mus musculus BAC clone RP23-304K3 from chromosome 9, complete sequence Length = 166474 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2725 gcttcatgagttcttcaaagat 2746 |||||||||||||||||||||| Sbjct: 28789 gcttcatgagttcttcaaagat 28810
>gb|AC125357.4| Mus musculus BAC clone RP23-235J18 from chromosome 9, complete sequence Length = 217511 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2725 gcttcatgagttcttcaaagat 2746 |||||||||||||||||||||| Sbjct: 185884 gcttcatgagttcttcaaagat 185905
>gb|AC137079.9| Medicago truncatula clone mth2-27d17, complete sequence Length = 122392 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 3003 ttaaaaactatatgtaaaaaat 3024 |||||||||||||||||||||| Sbjct: 80929 ttaaaaactatatgtaaaaaat 80908
>gb|BT009721.1| Arabidopsis thaliana At5g67620 gene, complete cds Length = 549 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 61 caccaccacctcttcctccacc 82 |||||||||||||||||||||| Sbjct: 502 caccaccacctcttcctccacc 481
>gb|AC144743.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0009H09, complete sequence Length = 148740 Score = 44.1 bits (22), Expect = 4.0 Identities = 28/30 (93%) Strand = Plus / Minus Query: 2462 ggaaagcagccaaaaacaatcttgacagat 2491 |||||| ||||||||||||| ||||||||| Sbjct: 56555 ggaaagaagccaaaaacaattttgacagat 56526
>gb|AC024257.25| Homo sapiens 12 BAC RP11-370I10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 184125 Score = 44.1 bits (22), Expect = 4.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1737 tatccttttttataattgtattttta 1762 ||||||||||||||||| |||||||| Sbjct: 171603 tatccttttttataattttattttta 171628
>emb|CR974450.13| Pig DNA sequence from clone CH242-77B9 on chromosome 7, complete sequence Length = 182537 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1599 ttttatgtatttgtacatatac 1620 |||||||||||||||||||||| Sbjct: 178684 ttttatgtatttgtacatatac 178663
>emb|CR361562.12| Zebrafish DNA sequence from clone CH211-281H24 in linkage group 8, complete sequence Length = 160720 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 3453 actttgtttcattaataaaaag 3474 |||||||||||||||||||||| Sbjct: 16573 actttgtttcattaataaaaag 16552
>emb|BX927125.18| Zebrafish DNA sequence from clone CH211-122L24 in linkage group 2, complete sequence Length = 165489 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1583 attttttatgctgattttttat 1604 |||||||||||||||||||||| Sbjct: 36937 attttttatgctgattttttat 36958
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 44.1 bits (22), Expect = 4.0 Identities = 28/30 (93%) Strand = Plus / Plus Query: 2462 ggaaagcagccaaaaacaatcttgacagat 2491 |||||| ||||||||||||| ||||||||| Sbjct: 2422572 ggaaagaagccaaaaacaattttgacagat 2422601 Score = 44.1 bits (22), Expect = 4.0 Identities = 28/30 (93%) Strand = Plus / Minus Query: 2462 ggaaagcagccaaaaacaatcttgacagat 2491 |||||| ||||||||||||| ||||||||| Sbjct: 9429877 ggaaagaagccaaaaacaattttgacagat 9429848
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 44.1 bits (22), Expect = 4.0 Identities = 28/30 (93%) Strand = Plus / Minus Query: 2462 ggaaagcagccaaaaacaatcttgacagat 2491 |||||| ||||||||||||| ||||||||| Sbjct: 23231149 ggaaagaagccaaaaacaattttgacagat 23231120 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 95 ctccccctcccctcctcccacc 116 |||||||||||||||||||||| Sbjct: 26513097 ctccccctcccctcctcccacc 26513076
>emb|AL138930.15| Human DNA sequence from clone RP11-528G1 on chromosome 1 Contains the SLAMF6 gene for SLAM family member 6, the CD84 gene for CD84 antigen (leukocyte antigen), a novel gene and the 3' end of the SLAMF1 gene for signaling lymphocytic activation molecule family member 1, complete sequence Length = 175386 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 3 gagagagagggagacacatgaa 24 |||||||||||||||||||||| Sbjct: 11267 gagagagagggagacacatgaa 11246
>gb|AC159207.2| Mus musculus BAC clone RP23-150H14 from chromosome 13, complete sequence Length = 191824 Score = 44.1 bits (22), Expect = 4.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 59 atcaccaccacctcttcctccacctc 84 ||||||||||||||||||||| |||| Sbjct: 81529 atcaccaccacctcttcctcctcctc 81504 Score = 44.1 bits (22), Expect = 4.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 59 atcaccaccacctcttcctccacctc 84 ||||||||||||||||||||| |||| Sbjct: 81568 atcaccaccacctcttcctcctcctc 81543
>gb|AY087476.1| Arabidopsis thaliana clone 35863 mRNA, complete sequence Length = 1396 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 3454 ctttgtttcattaataaaaagg 3475 |||||||||||||||||||||| Sbjct: 1368 ctttgtttcattaataaaaagg 1389
>emb|CR380953.1| Candida glabrata strain CBS138 chromosome G complete sequence Length = 992211 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2711 agaaacaatgaatggcttcatg 2732 |||||||||||||||||||||| Sbjct: 580885 agaaacaatgaatggcttcatg 580864
>gb|AY039846.1| Arabidopsis thaliana AT5g15650/F14F8_30 mRNA, complete cds Length = 1411 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 3454 ctttgtttcattaataaaaagg 3475 |||||||||||||||||||||| Sbjct: 1367 ctttgtttcattaataaaaagg 1388
>emb|AL391144.1|ATF14F8 Arabidopsis thaliana DNA chromosome 5, BAC clone F14F8 (ESSA project) Length = 96892 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 3454 ctttgtttcattaataaaaagg 3475 |||||||||||||||||||||| Sbjct: 9932 ctttgtttcattaataaaaagg 9953
>emb|AL645748.9| Mouse DNA sequence from clone RP23-241E24 on chromosome 13 Contains a CpG island, complete sequence Length = 58318 Score = 44.1 bits (22), Expect = 4.0 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1573 taaattaatgattttttatgctgatttttt 1602 ||||||||||||||||| || ||||||||| Sbjct: 27550 taaattaatgattttttttgttgatttttt 27579
>gb|AC146532.3| Otolemur garnettii clone CH256-151F13, complete sequence Length = 197659 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2046 agtacagcaggcaggagctttt 2067 |||||||||||||||||||||| Sbjct: 1833 agtacagcaggcaggagctttt 1854
>gb|AC154470.2| Mus musculus BAC clone RP23-193P13 from chromosome 13, complete sequence Length = 216294 Score = 44.1 bits (22), Expect = 4.0 Identities = 28/30 (93%) Strand = Plus / Minus Query: 2604 aaggcgctaaaacatttgcaaaggatttca 2633 |||||||||| | ||||||||||||||||| Sbjct: 132205 aaggcgctaacagatttgcaaaggatttca 132176
>gb|AC007599.6| Homo sapiens chromosome 16 clone RP11-177N22, complete sequence Length = 182101 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 3321 ctttcccctattgtagttcttt 3342 |||||||||||||||||||||| Sbjct: 106572 ctttcccctattgtagttcttt 106551
>dbj|AP004155.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1112_D12 Length = 97572 Score = 44.1 bits (22), Expect = 4.0 Identities = 28/30 (93%) Strand = Plus / Minus Query: 2462 ggaaagcagccaaaaacaatcttgacagat 2491 |||||| ||||||||||||| ||||||||| Sbjct: 54468 ggaaagaagccaaaaacaattttgacagat 54439
>gb|AC023732.5| Drosophila melanogaster X BAC RP98-42M11 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 177820 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1277 atctatttttaagcatgttatg 1298 |||||||||||||||||||||| Sbjct: 51047 atctatttttaagcatgttatg 51026
>dbj|AP004381.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0025F03 Length = 138042 Score = 44.1 bits (22), Expect = 4.0 Identities = 28/30 (93%) Strand = Plus / Plus Query: 2462 ggaaagcagccaaaaacaatcttgacagat 2491 |||||| ||||||||||||| ||||||||| Sbjct: 98542 ggaaagaagccaaaaacaattttgacagat 98571
>dbj|AB013390.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K9I9 Length = 51860 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 61 caccaccacctcttcctccacc 82 |||||||||||||||||||||| Sbjct: 44104 caccaccacctcttcctccacc 44125
>dbj|AK129697.1| Homo sapiens cDNA FLJ26186 fis, clone ADG04757 Length = 1830 Score = 44.1 bits (22), Expect = 4.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1737 tatccttttttataattgtattttta 1762 ||||||||||||||||| |||||||| Sbjct: 713 tatccttttttataattttattttta 738
>gb|AC091888.3| Homo sapiens chromosome 5 clone RP11-11K15, complete sequence Length = 151453 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 97 ccccctcccctcctcccacctc 118 |||||||||||||||||||||| Sbjct: 118872 ccccctcccctcctcccacctc 118893
>emb|BX323555.10| Zebrafish DNA sequence from clone DKEY-163M14 in linkage group 21, complete sequence Length = 180416 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 3011 tatatgtaaaaaatatctttct 3032 |||||||||||||||||||||| Sbjct: 28604 tatatgtaaaaaatatctttct 28625
>emb|CR377979.1| Pinus pinaster SSR, clone PPB3E09 Length = 624 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 63 ccaccacctcttcctccacctc 84 |||||||||||||||||||||| Sbjct: 156 ccaccacctcttcctccacctc 177
>emb|CR377918.1| Pinus pinaster SSR, clone PPB4A07 Length = 560 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 63 ccaccacctcttcctccacctc 84 |||||||||||||||||||||| Sbjct: 119 ccaccacctcttcctccacctc 140
>emb|CR354499.1| Pinus pinaster SSR, clone PPA5C03 Length = 496 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 63 ccaccacctcttcctccacctc 84 |||||||||||||||||||||| Sbjct: 337 ccaccacctcttcctccacctc 316
>emb|BX833536.1|CNS0A0DH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL60ZH04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 723 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 61 caccaccacctcttcctccacc 82 |||||||||||||||||||||| Sbjct: 555 caccaccacctcttcctccacc 534
>gb|AC008928.6|AC008928 Homo sapiens chromosome 5 clone CTD-2288H1, complete sequence Length = 110297 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 97 ccccctcccctcctcccacctc 118 |||||||||||||||||||||| Sbjct: 49510 ccccctcccctcctcccacctc 49489
>gb|AC157763.2| Pan troglodytes BAC clone CH251-340C15 from chromosome unknown, complete sequence Length = 198239 Score = 44.1 bits (22), Expect = 4.0 Identities = 28/30 (93%) Strand = Plus / Minus Query: 1746 ttataattgtatttttatggtatcaattat 1775 |||| ||||||||||| ||||||||||||| Sbjct: 161405 ttatgattgtatttttgtggtatcaattat 161376
>gb|AF013628.1|AF013628 Arabidopsis thaliana reversibly glycosylated polypeptide-2 (AtRGP) mRNA, complete cds Length = 1401 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 3454 ctttgtttcattaataaaaagg 3475 |||||||||||||||||||||| Sbjct: 1342 ctttgtttcattaataaaaagg 1363
>emb|AL929216.6| Zebrafish DNA sequence from clone CH211-138G9 in linkage group 20, complete sequence Length = 174383 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 3912 cttttagttttagttaagttag 3933 |||||||||||||||||||||| Sbjct: 81280 cttttagttttagttaagttag 81301
>gb|U88977.1|HSU88977 Human prostacyclin synthase gene, promoter region Length = 3014 Score = 44.1 bits (22), Expect = 4.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 94 tctccccctcccctcctcccac 115 |||||||||||||||||||||| Sbjct: 2735 tctccccctcccctcctcccac 2756 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 884,097,904 Number of extensions: 51386433 Number of successful extensions: 338872 Number of sequences better than 10.0: 75 Number of HSP's gapped: 338852 Number of HSP's successfully gapped: 93 Length of query: 4145 Length of database: 18,610,659,111 Length adjustment: 24 Effective length of query: 4121 Effective length of database: 18,499,340,271 Effective search space: 76235781256791 Effective search space used: 76235781256791 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)