ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf30k01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os01g0764300:Os01g0764300 44 3e-04
2AK073021:Os01g0951100 33 0.45
3Os02g0138000:Os02g0138000 32 1.3
4AK121203:Os05g0382000 32 1.7
5AK072704:Os05g0382000 32 1.7
6AK111074:Os02g0599400 31 2.2
7AK110203: 30 6.4
8AK110198: 30 6.4
9Os10g0462700:Os10g0462700 30 6.5

>Os01g0764300:Os01g0764300 |
          Length = 382
 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 38/88 (43%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
 Frame = +2

Query: 569 LLAKHEPSIATLLRPPRSSQTPAHLLHFPTHVGTLSSVMLVAATMAHEPCDSGLGIS--- 739
           LLA   P  A    PPR++ T   L  F       SS   VA  + HE  DSGLG S   
Sbjct: 13  LLATRPPHPAPPPPPPRTTTTGQTLPCFSARA--FSSASAVAVAVPHEARDSGLGSSAYW 70

Query: 740 P*IRAALEAVSATAPSLEEED-GLKRYI 820
             IRAA E+  A  P  EEED GL R I
Sbjct: 71  AWIRAAAESAPAPPPQQEEEDEGLARCI 98



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>AK073021:Os01g0951100 |
          Length = 381

 Score = 33.5 bits (75), Expect = 0.45
 Identities = 15/20 (75%), Positives = 15/20 (75%)
 Frame = +1

Query: 982  SFTFGALICIKCSRAPRSLG 1041
            S TFG  ICIKCS A RSLG
Sbjct: 77   SLTFGVFICIKCSGAHRSLG 96



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>Os02g0138000:Os02g0138000 |
          Length = 694

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 26/84 (30%), Positives = 34/84 (40%), Gaps = 3/84 (3%)
 Frame = +1

Query: 430 GSSLTIRR*PFGHRGMPNVLSASCRSTHTVILYPSSHSCRESPRAHL--VG*TRAQHRHT 603
           GSS T    P  + G P+  S       T   YPS  S   +P  H    G T   H   
Sbjct: 462 GSSSTTPSYPSPNGGKPSTPSHPSPPGSTTPSYPSPPSSSTTPSYHSPPQGHTTPSHPSP 521

Query: 604 PEATTIEPNSGAPATFP-HPCWYS 672
           P ++T  P+   P + P HP + S
Sbjct: 522 PSSSTAPPSHSPPQSTPTHPSYPS 545



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>AK121203:Os05g0382000 |
          Length = 395

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 14/17 (82%), Positives = 14/17 (82%)
 Frame = +1

Query: 991  FGALICIKCSRAPRSLG 1041
            FGALICIKCS   RSLG
Sbjct: 90   FGALICIKCSGTHRSLG 106



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>AK072704:Os05g0382000 |
          Length = 395

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 14/17 (82%), Positives = 14/17 (82%)
 Frame = +1

Query: 991  FGALICIKCSRAPRSLG 1041
            FGALICIKCS   RSLG
Sbjct: 90   FGALICIKCSGTHRSLG 106



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>AK111074:Os02g0599400 |
          Length = 184

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = -2

Query: 324 TLSRLGDGVVRVNQR*RYWWSEVEGWVSDALHG--LCRRWSSWTHRR 190
           T +R+GDG V    R   WW+  +GW+  A  G      W  +T RR
Sbjct: 26  TPTRVGDGGVDDMMRGHRWWTTAQGWLLMARRGSPCTFLWDPFTGRR 72



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>AK110203: |
          Length = 1316

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
 Frame = +3

Query: 96  LPASLFLASYGHGRAPPKLSTTVLIATTVPRPSDVSTSSTSDRAHVA-RH*PILQPPTTN 272
           + A +  A +     P +L+T  +     PR S     +TSD  H A  H   L PP+  
Sbjct: 389 IKADIQSAHFPKTPVPSRLATLAITPAITPRTSLDHARNTSDSGHHATAHHVQLHPPSRP 448

Query: 273 IVTADSPVPHH 305
                +P  HH
Sbjct: 449 HSPGPAPAQHH 459



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>AK110198: |
          Length = 961

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -3

Query: 743 RERSRGQSHKVHGPWWQR 690
           R RSR   H+V  PWW+R
Sbjct: 845 RSRSRSTPHRVSDPWWER 862



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>Os10g0462700:Os10g0462700 |
          Length = 211

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 18/41 (43%), Positives = 20/41 (48%)
 Frame = -2

Query: 228 GLCRRWSSWTHRRGEERWWL*VRWWKVSAGLGHGHKRRGRA 106
           G  RR   W  R+G ER     R W    G G G +RRGRA
Sbjct: 128 GAARRLGPWLRRKGAEREGC--RRW----GEGEGERRRGRA 162


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 50,666,914
Number of extensions: 1242525
Number of successful extensions: 3773
Number of sequences better than 10.0: 9
Number of HSP's gapped: 3764
Number of HSP's successfully gapped: 9
Length of query: 541
Length of database: 15,399,855
Length adjustment: 105
Effective length of query: 436
Effective length of database: 11,195,550
Effective search space: 4881259800
Effective search space used: 4881259800
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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