>Q99ML9:RN111_MOUSE E3 ubiquitin-protein ligase Arkadia - Mus musculus (Mouse)|
          Length = 989
 Score = 40.8 bits (94), Expect = 0.017
 Identities = 20/62 (32%), Positives = 31/62 (50%)
 Frame = +3

Query: 123 YGHGRAPPKLSTTVLIATTVPRPSDVSTSSTSDRAHVARH*PILQPPTTNIVTADSPVPH 302
           + HG APP+      +   +P P     S  S  +H A H P+  PP T++ +  +P+P 
Sbjct: 661 HSHGNAPPQTQPPPQVDYVIPHPVHAFHSQIS--SHAASH-PVAPPPPTHLGSTAAPIPQ 717

Query: 303 HL 308
           HL
Sbjct: 718 HL 719

>Q5R476:RN111_PONPY E3 ubiquitin-protein ligase Arkadia - Pongo pygmaeus (Orangutan)|
          Length = 986

 Score = 38.5 bits (88), Expect = 0.082
 Identities = 18/62 (29%), Positives = 29/62 (46%)
 Frame = +3

Query: 123 YGHGRAPPKLSTTVLIATTVPRPSDVSTSSTSDRAHVARH*PILQPPTTNIVTADSPVPH 302
           + HG  PP+      +   +P P     S  S  +H   H P+  PP T++ +  +P+P 
Sbjct: 666 HSHGNPPPQTQPPPQVDYVIPHPVHAFHSQIS--SHATSH-PVAPPPPTHLASTAAPIPQ 722

Query: 303 HL 308
           HL
Sbjct: 723 HL 724

>Q6ZNA4:RN111_HUMAN E3 ubiquitin-protein ligase Arkadia - Homo sapiens (Human)|
          Length = 994

 Score = 38.5 bits (88), Expect = 0.082
 Identities = 18/62 (29%), Positives = 29/62 (46%)
 Frame = +3

Query: 123 YGHGRAPPKLSTTVLIATTVPRPSDVSTSSTSDRAHVARH*PILQPPTTNIVTADSPVPH 302
           + HG  PP+      +   +P P     S  S  +H   H P+  PP T++ +  +P+P 
Sbjct: 666 HSHGNPPPQTQPPPQVDYVIPHPVHAFHSQIS--SHATSH-PVAPPPPTHLASTAAPIPQ 722

Query: 303 HL 308
           HL
Sbjct: 723 HL 724

>Q42560:ACO1_ARATH Aconitate hydratase 1 - Arabidopsis thaliana (Mouse-ear cress)|
          Length = 898

 Score = 35.0 bits (79), Expect = 0.91
 Identities = 18/48 (37%), Positives = 27/48 (56%)
 Frame = +2

Query: 677 SVMLVAATMAHEPCDSGLGISP*IRAALEAVSATAPSLEEEDGLKRYI 820
           SVML AA +A + CD GL + P I+ +L   S        + GL++Y+
Sbjct: 448 SVMLGAALVAKKACDLGLEVKPWIKTSLAPGSGVVTKYLAKSGLQKYL 495

>P45456:ACEA1_SOYBN Isocitrate lyase 1 - Glycine max (Soybean)|
          Length = 558

 Score = 34.3 bits (77), Expect = 1.6
 Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
 Frame = -2

Query: 693 ATNMTDERVPTWVGKCSRCAGVW--LDRGGLRSVAMLGSCLANKVSPRGLAARVRR 532
           A+ M+DE++  ++ K ++   VW  +  GGL S A++ S  A   + RG+ A V R
Sbjct: 429 ASGMSDEQMKDFIPKIAKLGYVWQFITVGGLHSNALITSTFARDFANRGMLAYVER 484

>O13612:NEP2_SCHPO NEDD8-specific protease 2 - Schizosaccharomyces pombe (Fission|
           yeast)
          Length = 415

 Score = 33.9 bits (76), Expect = 2.0
 Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
 Frame = +3

Query: 135 RAPPKLSTTVLIA--TTVPRPSDVSTSSTSDR---AHVARH*PILQPPTTNIVTADSPVP 299
           +A  ++ T++L A  + VP+PS+  T    D+   + + +   +L+ PT + VT+DS  P
Sbjct: 269 KALMEVITSLLAAYGSKVPKPSETHTDPEKDKKIFSKICKTEELLELPTLSAVTSDSAQP 328

Query: 300 HHLQA 314
           H L A
Sbjct: 329 HSLPA 333

>P55609:Y4OX_RHISN Uncharacterized protein y4oX - Rhizobium sp. (strain NGR234)|
          Length = 360

 Score = 33.9 bits (76), Expect = 2.0
 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 9/54 (16%)
 Frame = +2

Query: 932  RGRGSYFSALPGRRWQNHLLLV---------P*FVSNVLEHLEAWGSYFQDGES 1066
            +G+G   S LPGR+WQN LL+          P   +NV E+L++    F   ES
Sbjct: 284  QGKGQQVSLLPGRKWQNALLIEQFCQWLDSGPPMATNVWENLQSVALVFSAIES 337

>P45457:ACEA2_SOYBN Isocitrate lyase 2 - Glycine max (Soybean)|
          Length = 557

 Score = 33.9 bits (76), Expect = 2.0
 Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
 Frame = -2

Query: 693 ATNMTDERVPTWVGKCSRCAGVW--LDRGGLRSVAMLGSCLANKVSPRGLAARVRR 532
           A+ M+DE++  ++ K ++   VW  +  GGL S A++ S  A   + RG+ A V R
Sbjct: 428 ASGMSDEQMRDFIPKIAKLGYVWQFITVGGLHSNALITSTFARDFANRGMLAYVER 483

>Q9SIB9:ACO2M_ARATH Aconitate hydratase 2, mitochondrial precursor - Arabidopsis|
           thaliana (Mouse-ear cress)
          Length = 990

 Score = 32.3 bits (72), Expect = 5.9
 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 8/71 (11%)
 Frame = +2

Query: 632 PAHLLHFPTHVGTLSS--------VMLVAATMAHEPCDSGLGISP*IRAALEAVSATAPS 787
           PA L H    +  ++S        VML A  +A + CD GL + P I+ +L   S     
Sbjct: 517 PAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACDLGLQVKPWIKTSLAPGSGVVTK 576

Query: 788 LEEEDGLKRYI 820
              + GL+ Y+
Sbjct: 577 YLLKSGLQEYL 587

>Q4ZHG4:FNDC1_HUMAN Fibronectin type III domain-containing protein 1 - Homo sapiens|
            (Human)
          Length = 1836

 Score = 32.0 bits (71), Expect = 7.7
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = +3

Query: 144  PKLSTTVLIATTVPRPSDVSTSSTSDRAHVARH*PILQPPTTNIVTADSPVP 299
            P  +TT L  TT PRP+  +T  T+ R          +  TT   T  +P+P
Sbjct: 1401 PTTTTTPLPTTTTPRPTTATTRRTTTRRPTTTVRTTTRTTTTTTPTPTTPIP 1452

>Q7TTX7:TGT_SYNPX Queuine tRNA-ribosyltransferase - Synechococcus sp. (strain WH8102)|
          Length = 373

 Score = 32.0 bits (71), Expect = 7.7
 Identities = 21/45 (46%), Positives = 28/45 (62%)
 Frame = +2

Query: 476 CPTCSVHHVDPHTQSFYIHLLTRAASPLGLTLLAKHEPSIATLLR 610
           CPTCS      HT+++  HL+ R+   LGLTLL+ H  +I  LLR
Sbjct: 305 CPTCS----GGHTRAYLNHLI-RSEELLGLTLLSLH--NITHLLR 342


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 295,535,687
Number of extensions: 6693730
Number of successful extensions: 16488
Number of sequences better than 10.0: 11
Number of HSP's gapped: 16472
Number of HSP's successfully gapped: 11
Length of query: 541
Length of database: 100,686,439
Length adjustment: 118
Effective length of query: 423
Effective length of database: 68,319,629
Effective search space: 28899203067
Effective search space used: 28899203067
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)