ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf27j20 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK100166:Os07g0658200 | 473 | e-133 | 2 | AK100864:Os07g0658200 | 386 | e-107 | 3 | AK104434:Os03g0769100 | 80 | 6e-15 | 4 | AK068283:Os03g0769100 | 80 | 6e-15 | 5 | AB022675:Os03g0769100 | 80 | 6e-15 | 6 | L36313:Os11g0127900 | 35 | 0.21 | 7 | AK121503:Os12g0124200 | 35 | 0.21 | 8 | AK059550:Os11g0127900 | 35 | 0.21 | 9 | AK058697:Os12g0124200 | 35 | 0.21 | 10 | AK063008: | 33 | 0.61 | 11 | AK121757:Os02g0697600 | 32 | 1.3 | 12 | Os03g0343300:Os03g0343300 | 31 | 2.3 | 13 | Os03g0802700:Os03g0802700 | 31 | 3.0 | 14 | AK073942:Os12g0605500 | 31 | 3.0 | 15 | Os02g0627900:Os02g0627900 | 30 | 3.9 | 16 | AK064645: | 30 | 5.1 | 17 | AK109416: | 30 | 6.7 | 18 | AK107658: | 30 | 6.7 |
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>AK100166:Os07g0658200 | Length = 415 Score = 473 bits (1216), Expect = e-133 Identities = 255/394 (64%), Positives = 278/394 (70%), Gaps = 9/394 (2%) Frame = +3 Query: 210 TSGGDDDTRRPWAFTQDSEXXXXXXXXXXXXXXXIPGEAPLGSSAVVEDPWSKDFRAEDG 389 TSG DDD +PWAFT +S GE PLG SA EDPW+KDFRAE Sbjct: 59 TSGRDDDPNKPWAFTPESGDPDPFAAGEGVEAPA--GEDPLGLSAAGEDPWAKDFRAEGS 116 Query: 390 DKADVFEEIYKDXXXXXXXXXXXXXXXX-----WKLDSEDEXXXXXXXXXXXXXXXXXXX 554 +K DVFEEI+K+ W L EDE Sbjct: 117 EKGDVFEEIFKEEAATAAVASGEKAPGAGADELWTLSGEDEK------------------ 158 Query: 555 XXXXXEPWSWDLKDETDDPFAAAV---GVEGIADEGTQIEELVDGK-EEDAERQRQENTA 722 DPFA AV G+EGI +G I+E G+ EE+ ER+R E A Sbjct: 159 -----------------DPFAEAVLGGGLEGIGGDGAAIDEADAGEDEEEEERKRLERRA 201 Query: 723 REQQLMETLKGPDRAFGDLISASGITEDMIDSLILLKDARGIPGLPPLSEIQDRAIQKMN 902 REQ+LMETLKGP+RAFGDLI ASGITEDMI SLILLKD RG+PGLPPL EI+D I+KMN Sbjct: 202 REQELMETLKGPNRAFGDLIEASGITEDMIASLILLKDVRGVPGLPPLREIEDETIEKMN 261 Query: 903 ATSSRAEVERQMQEEIAKARVRQVDEKGRAYGTGRRKCSIARVWIQPGDGKFVVNDKQFD 1082 ATSSRA+VERQ QEEIAKARVRQVDEKGRAYGTG+RKCSIARVWIQPGDGKF+VNDKQFD Sbjct: 262 ATSSRADVERQKQEEIAKARVRQVDEKGRAYGTGKRKCSIARVWIQPGDGKFIVNDKQFD 321 Query: 1083 AYFPILDHRADLLRPFTVTKTLGLWDVACTVKGGGVSGQVGAVRLGISRALQNWEPGLHP 1262 +YFPILDHRADLLRPFTVTKTLG WDV CTVKGGGVSGQVGA+RLGISRALQNWEPGL P Sbjct: 322 SYFPILDHRADLLRPFTVTKTLGRWDVTCTVKGGGVSGQVGAIRLGISRALQNWEPGLRP 381 Query: 1263 YLKSAGYLTRDSRVVERKKPGKAKARKSFQWVKR 1364 LK+AGYLTRDSRVVERKKPGKAKARKSFQWVKR Sbjct: 382 NLKAAGYLTRDSRVVERKKPGKAKARKSFQWVKR 415
>AK100864:Os07g0658200 | Length = 209 Score = 386 bits (991), Expect = e-107 Identities = 188/209 (89%), Positives = 198/209 (94%) Frame = +3 Query: 738 METLKGPDRAFGDLISASGITEDMIDSLILLKDARGIPGLPPLSEIQDRAIQKMNATSSR 917 METLKGP+RAFGDLI ASGITEDMI SLILLKD RG+PGLPPL EI+D I+KMNATSSR Sbjct: 1 METLKGPNRAFGDLIEASGITEDMIASLILLKDVRGVPGLPPLREIEDETIEKMNATSSR 60 Query: 918 AEVERQMQEEIAKARVRQVDEKGRAYGTGRRKCSIARVWIQPGDGKFVVNDKQFDAYFPI 1097 A+VERQ QEEIAKARVRQVDEKGRAYGTG+RKCSIARVWIQPGDGKF+VNDKQFD+YFPI Sbjct: 61 ADVERQKQEEIAKARVRQVDEKGRAYGTGKRKCSIARVWIQPGDGKFIVNDKQFDSYFPI 120 Query: 1098 LDHRADLLRPFTVTKTLGLWDVACTVKGGGVSGQVGAVRLGISRALQNWEPGLHPYLKSA 1277 LDHRADLLRPFTVTKTLG WDV CTVKGGGVSGQVGA+RLGISRALQNWEPGL P LK+A Sbjct: 121 LDHRADLLRPFTVTKTLGRWDVTCTVKGGGVSGQVGAIRLGISRALQNWEPGLRPNLKAA 180 Query: 1278 GYLTRDSRVVERKKPGKAKARKSFQWVKR 1364 GYLTRDSRVVERKKPGKAKARKSFQWVKR Sbjct: 181 GYLTRDSRVVERKKPGKAKARKSFQWVKR 209
>AK104434:Os03g0769100 | Length = 223 Score = 79.7 bits (195), Expect = 6e-15 Identities = 54/129 (41%), Positives = 70/129 (54%), Gaps = 3/129 (2%) Frame = +3 Query: 987 RAYGTGRRKCSIARVWIQPGDGKFVVNDKQFDAYFPILDHRADLLRPFTVTKTLGL---W 1157 R TGRRK +IARV +Q G G+ +N + Y + + VT LG + Sbjct: 97 RITATGRRKTAIARVVLQEGTGRVFINFRDAKEYLQGNPMWMEYCKVPLVT--LGFENSY 154 Query: 1158 DVACTVKGGGVSGQVGAVRLGISRALQNWEPGLHPYLKSAGYLTRDSRVVERKKPGKAKA 1337 DV V GGG+SGQ A+ LG++RAL L+ G LTRD+R+VERKK G KA Sbjct: 155 DVFVKVHGGGLSGQAQAICLGVARALVKISTANKVTLRGEGLLTRDTRIVERKKAGLKKA 214 Query: 1338 RKSFQWVKR 1364 RK Q+ KR Sbjct: 215 RKRPQFSKR 223
>AK068283:Os03g0769100 | Length = 223 Score = 79.7 bits (195), Expect = 6e-15 Identities = 54/129 (41%), Positives = 70/129 (54%), Gaps = 3/129 (2%) Frame = +3 Query: 987 RAYGTGRRKCSIARVWIQPGDGKFVVNDKQFDAYFPILDHRADLLRPFTVTKTLGL---W 1157 R TGRRK +IARV +Q G G+ +N + Y + + VT LG + Sbjct: 97 RITATGRRKTAIARVVLQEGTGRVFINFRDAKEYLQGNPMWMEYCKVPLVT--LGFENSY 154 Query: 1158 DVACTVKGGGVSGQVGAVRLGISRALQNWEPGLHPYLKSAGYLTRDSRVVERKKPGKAKA 1337 DV V GGG+SGQ A+ LG++RAL L+ G LTRD+R+VERKK G KA Sbjct: 155 DVFVKVHGGGLSGQAQAICLGVARALVKISTANKVTLRGEGLLTRDTRIVERKKAGLKKA 214 Query: 1338 RKSFQWVKR 1364 RK Q+ KR Sbjct: 215 RKRPQFSKR 223
>AB022675:Os03g0769100 | Length = 223 Score = 79.7 bits (195), Expect = 6e-15 Identities = 54/129 (41%), Positives = 70/129 (54%), Gaps = 3/129 (2%) Frame = +3 Query: 987 RAYGTGRRKCSIARVWIQPGDGKFVVNDKQFDAYFPILDHRADLLRPFTVTKTLGL---W 1157 R TGRRK +IARV +Q G G+ +N + Y + + VT LG + Sbjct: 97 RITATGRRKTAIARVVLQEGTGRVFINFRDAKEYLQGNPMWMEYCKVPLVT--LGFENSY 154 Query: 1158 DVACTVKGGGVSGQVGAVRLGISRALQNWEPGLHPYLKSAGYLTRDSRVVERKKPGKAKA 1337 DV V GGG+SGQ A+ LG++RAL L+ G LTRD+R+VERKK G KA Sbjct: 155 DVFVKVHGGGLSGQAQAICLGVARALVKISTANKVTLRGEGLLTRDTRIVERKKAGLKKA 214 Query: 1338 RKSFQWVKR 1364 RK Q+ KR Sbjct: 215 RKRPQFSKR 223
>L36313:Os11g0127900 | Length = 149 Score = 34.7 bits (78), Expect = 0.21 Identities = 36/133 (27%), Positives = 53/133 (39%), Gaps = 16/133 (12%) Frame = +3 Query: 1002 GRRKCSIARVWIQPGDGKFVVNDKQFDAYFPILDHRADLLRPFTVTKTLGLWDV--ACTV 1175 GR+K ++A + +PG G VN + P + R P + D+ V Sbjct: 17 GRKKTAVAVSYCKPGRGLIKVNGVPIELIRPEM-LRLKAFEPILLAGRSRFKDIDMRIRV 75 Query: 1176 KGGGVSGQVGAVRLGISRALQNWEPGLHPYLKSAG--------------YLTRDSRVVER 1313 +GGG + Q+ A+R I++AL + Y+ A L D R E Sbjct: 76 RGGGKTSQIYAIRQAIAKALVAY---YQKYVDEASKKEVKDIFARYDRTLLVADPRRCEP 132 Query: 1314 KKPGKAKARKSFQ 1352 KK G AR FQ Sbjct: 133 KKFGGRGARARFQ 145
>AK121503:Os12g0124200 | Length = 149 Score = 34.7 bits (78), Expect = 0.21 Identities = 36/133 (27%), Positives = 53/133 (39%), Gaps = 16/133 (12%) Frame = +3 Query: 1002 GRRKCSIARVWIQPGDGKFVVNDKQFDAYFPILDHRADLLRPFTVTKTLGLWDV--ACTV 1175 GR+K ++A + +PG G VN + P + R P + D+ V Sbjct: 17 GRKKTAVAVSYCKPGRGLIKVNGVPIELIRPEM-LRLKAFEPILLAGRSRFKDIDMRIRV 75 Query: 1176 KGGGVSGQVGAVRLGISRALQNWEPGLHPYLKSAG--------------YLTRDSRVVER 1313 +GGG + Q+ A+R I++AL + Y+ A L D R E Sbjct: 76 RGGGKTSQIYAIRQAIAKALVAY---YQKYVDEASKKEVKDIFARYDRTLLVADPRRCEP 132 Query: 1314 KKPGKAKARKSFQ 1352 KK G AR FQ Sbjct: 133 KKFGGRGARARFQ 145
>AK059550:Os11g0127900 | Length = 149 Score = 34.7 bits (78), Expect = 0.21 Identities = 36/133 (27%), Positives = 53/133 (39%), Gaps = 16/133 (12%) Frame = +3 Query: 1002 GRRKCSIARVWIQPGDGKFVVNDKQFDAYFPILDHRADLLRPFTVTKTLGLWDV--ACTV 1175 GR+K ++A + +PG G VN + P + R P + D+ V Sbjct: 17 GRKKTAVAVSYCKPGRGLIKVNGVPIELIRPEM-LRLKAFEPILLAGRSRFKDIDMRIRV 75 Query: 1176 KGGGVSGQVGAVRLGISRALQNWEPGLHPYLKSAG--------------YLTRDSRVVER 1313 +GGG + Q+ A+R I++AL + Y+ A L D R E Sbjct: 76 RGGGKTSQIYAIRQAIAKALVAY---YQKYVDEASKKEVKDIFARYDRTLLVADPRRCEP 132 Query: 1314 KKPGKAKARKSFQ 1352 KK G AR FQ Sbjct: 133 KKFGGRGARARFQ 145
>AK058697:Os12g0124200 | Length = 149 Score = 34.7 bits (78), Expect = 0.21 Identities = 36/133 (27%), Positives = 53/133 (39%), Gaps = 16/133 (12%) Frame = +3 Query: 1002 GRRKCSIARVWIQPGDGKFVVNDKQFDAYFPILDHRADLLRPFTVTKTLGLWDV--ACTV 1175 GR+K ++A + +PG G VN + P + R P + D+ V Sbjct: 17 GRKKTAVAVSYCKPGRGLIKVNGVPIELIRPEM-LRLKAFEPILLAGRSRFKDIDMRIRV 75 Query: 1176 KGGGVSGQVGAVRLGISRALQNWEPGLHPYLKSAG--------------YLTRDSRVVER 1313 +GGG + Q+ A+R I++AL + Y+ A L D R E Sbjct: 76 RGGGKTSQIYAIRQAIAKALVAY---YQKYVDEASKKEVKDIFARYDRTLLVADPRRCEP 132 Query: 1314 KKPGKAKARKSFQ 1352 KK G AR FQ Sbjct: 133 KKFGGRGARARFQ 145
>AK063008: | Length = 144 Score = 33.1 bits (74), Expect = 0.61 Identities = 36/138 (26%), Positives = 55/138 (39%), Gaps = 21/138 (15%) Frame = +3 Query: 1002 GRRKCSIARVWIQPGDGKFVVNDKQFDAYFPILDHRADLLRPFTVTKTLGLW-------D 1160 GR+K + A + + G+G +N + P ++LR T L L D Sbjct: 12 GRKKNATAVAYCKRGNGLIKINGTPIELVEP------EILRVKTYEPVLLLGQQRFANVD 65 Query: 1161 VACTVKGGGVSGQVGAVRLGISRALQNWEPGLHPYLKSAG--------------YLTRDS 1298 + V+GGG + Q+ A+R I+++L + Y+ A L D Sbjct: 66 IRIRVRGGGHTAQIYAIRQAIAKSLVAY---YQKYVDEASKKEIKDILLAYDRTLLVADP 122 Query: 1299 RVVERKKPGKAKARKSFQ 1352 R E KK G AR FQ Sbjct: 123 RRCEAKKFGGPSARARFQ 140
>AK121757:Os02g0697600 | Length = 640 Score = 32.0 bits (71), Expect = 1.3 Identities = 28/93 (30%), Positives = 44/93 (47%) Frame = +3 Query: 663 EELVDGKEEDAERQRQENTAREQQLMETLKGPDRAFGDLISASGITEDMIDSLILLKDAR 842 +ELV +EE A RQ Q A E+Q+ E + DR A I E I+ +L +A Sbjct: 185 QELVKMQEESAIRQEQMRRAIEEQIQEERRKTDR-------AKAIVEKEIEQEKILAEAN 237 Query: 843 GIPGLPPLSEIQDRAIQKMNATSSRAEVERQMQ 941 L +E +R ++ ++AE E+ +Q Sbjct: 238 ARIKLKKQTEDVER---RLLIEGAKAEKEKWVQ 267
>Os03g0343300:Os03g0343300 | Length = 884 Score = 31.2 bits (69), Expect = 2.3 Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 4/105 (3%) Frame = +3 Query: 642 ADEGTQIEELVDGKEEDAERQ---RQENTAREQQLMETLKGPDRAFGDLISASGITEDMI 812 +DEG +EE G++ED E+Q QE T ++ + K + +L G+ + + Sbjct: 124 SDEGEDMEEDDAGEDEDEEKQIRILQETTGMPREAFDGGKRKKQPL-ELPFQPGVGDGPV 182 Query: 813 DSLILLKDARGIPGLPPL-SEIQDRAIQKMNATSSRAEVERQMQE 944 LL + +G PG L +Q + + + + A+VER+ E Sbjct: 183 TIHDLLNNIQGKPGYSKLRKRLQQQEKKPIVVQAPLAKVEREKLE 227
>Os03g0802700:Os03g0802700 | Length = 590 Score = 30.8 bits (68), Expect = 3.0 Identities = 30/112 (26%), Positives = 51/112 (45%) Frame = +3 Query: 573 PWSWDLKDETDDPFAAAVGVEGIADEGTQIEELVDGKEEDAERQRQENTAREQQLMETLK 752 P S +E AAA EG + Q+EEL + +EE+ + ++Q+ +++ + K Sbjct: 25 PESDSESEELSYDTAAADEEEGEEEAPNQMEELEEEQEEEKKEKKQKKEMSKEKKRKKEK 84 Query: 753 GPDRAFGDLISASGITEDMIDSLILLKDARGIPGLPPLSEIQDRAIQKMNAT 908 G + SGI +M+ S + +SE RAI++MN T Sbjct: 85 GNE-------GGSGILTNMLFSEL------------GVSEPTARAIREMNYT 117
>AK073942:Os12g0605500 | Length = 760 Score = 30.8 bits (68), Expect = 3.0 Identities = 29/97 (29%), Positives = 45/97 (46%) Frame = +3 Query: 633 EGIADEGTQIEELVDGKEEDAERQRQENTAREQQLMETLKGPDRAFGDLISASGITEDMI 812 EG+A G IEE G EE ++E T ++QL+ + D I+ + + Sbjct: 582 EGVALLG--IEEAKRGCEEKDGGVKEETTDNDKQLV--------IYQDSINLTPAESVLA 631 Query: 813 DSLILLKDARGIPGLPPLSEIQDRAIQKMNATSSRAE 923 ++ D R + LPPLS + R+ K+ SSR E Sbjct: 632 TPSVV--DYRPLVALPPLSSKKPRSSTKLGGYSSRLE 666
>Os02g0627900:Os02g0627900 | Length = 720 Score = 30.4 bits (67), Expect = 3.9 Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 3/46 (6%) Frame = +3 Query: 585 DLKDETDDPFAAAVGVE--GIADEGTQIEELVDGKE-EDAERQRQE 713 D+ + D A VG++ G+ADEG + +VD E ED++ +R E Sbjct: 628 DVNAQEDGGVVAPVGIQLGGVADEGETVGAIVDEMEREDSDNERVE 673
>AK064645: | Length = 175 Score = 30.0 bits (66), Expect = 5.1 Identities = 37/132 (28%), Positives = 54/132 (40%), Gaps = 18/132 (13%) Frame = +3 Query: 1011 KCSIARVWIQPGDGKFVVNDKQFDAYFP-ILDHRADLLRPFTVT---KTLGLWDVACTVK 1178 +C A + G+G VN + + P L ++ LL P + + G+ D+ VK Sbjct: 46 RCPPATCHCKRGNGLIKVNGRPLEMIEPRTLQYK--LLEPVLLLGKERFAGV-DIRVRVK 102 Query: 1179 GGGVSGQVGAVRLGISRALQNWEPGLHPYLKSAG--------------YLTRDSRVVERK 1316 GGG Q+ A+R IS+AL + Y+ A L D R E K Sbjct: 103 GGGHVAQIYAIRQSISKALVAY---YQKYVDEASKKEIKDILIQYDRTLLVADPRRCESK 159 Query: 1317 KPGKAKARKSFQ 1352 K G AR +Q Sbjct: 160 KFGGPGARARYQ 171
>AK109416: | Length = 462 Score = 29.6 bits (65), Expect = 6.7 Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 3/108 (2%) Frame = +3 Query: 606 DPFAAAVGVEGIADEGTQIEELVDGKEEDAERQRQE--NTAREQQLMETLKGPDRAF-GD 776 D AV IAD G +I ELV E++A+ + E + ++ + +R + + Sbjct: 47 DTVVNAVQKANIADRGKKITELVTALEKNADTTQTEVASVLVQEAASASFTRVERFWLTN 106 Query: 777 LISASGITEDMIDSLILLKDARGIPGLPPLSEIQDRAIQKMNATSSRA 920 I G T D++ LK + GLP +SEI + I ++ SS A Sbjct: 107 QIYIEGATIDLV-----LK----LSGLPSVSEITEEEIITLDPISSTA 145
>AK107658: | Length = 245 Score = 29.6 bits (65), Expect = 6.7 Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 7/117 (5%) Frame = +3 Query: 600 TDDPFAAAVGVEGIADEGTQIEELVDGKEEDAER-----QRQENTAREQQLMETLKGPDR 764 TD +A G+A G +E+ DG EE+ + + ++ ARE L+E Sbjct: 2 TDTHDDSAGKQRGLASPGVDVEDGRDGGEEEDDTDNTRGKERDGVAREADLLE------- 54 Query: 765 AFGDLISASGITEDMIDSLILLK--DARGIPGLPPLSEIQDRAIQKMNATSSRAEVE 929 G+ ED +D+ LL+ D G G + + + + +S+AE+E Sbjct: 55 ------DEGGVVEDEVDARPLLEEHDQDGDEGPSKVGRVGEERL-----VTSKAELE 100 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 39,224,209 Number of extensions: 848160 Number of successful extensions: 3367 Number of sequences better than 10.0: 18 Number of HSP's gapped: 3338 Number of HSP's successfully gapped: 20 Length of query: 561 Length of database: 15,399,855 Length adjustment: 106 Effective length of query: 455 Effective length of database: 11,155,509 Effective search space: 5075756595 Effective search space used: 5075756595 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
