ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf27j10 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK098995:Os09g0284300 | 77 | 1e-14 | 2 | AK059004:Os09g0284300 | 77 | 1e-14 | 3 | AK109191:Os08g0338600 | 62 | 7e-10 | 4 | Os02g0467500:Os02g0467500 | 31 | 0.96 | 5 | AK067385:Os03g0304400 | 29 | 4.7 | 6 | AK067631:Os03g0183100 | 28 | 6.2 | 7 | AK065516:Os03g0183100 | 28 | 6.2 | 8 | AJ315791:Os03g0183100 | 28 | 6.2 | 9 | AK106074:Os01g0834700 | 28 | 8.1 | 10 | AK105183:Os08g0508600 | 28 | 8.1 | 11 | AK101559:Os01g0834700 | 28 | 8.1 | 12 | AK066896:Os03g0270200 | 28 | 8.1 | 13 | AK060809:Os03g0270200 | 28 | 8.1 | 14 | AK058413:Os01g0834700 | 28 | 8.1 |
|---|
>AK098995:Os09g0284300 | Length = 155 Score = 77.4 bits (189), Expect = 1e-14 Identities = 59/160 (36%), Positives = 75/160 (46%), Gaps = 15/160 (9%) Frame = +1 Query: 79 MEGVGARLGRSSARYGP----AMTFTGPVRKWRKEWVPI---XXXXXXXXXXXXXXRGNN 237 M+ VGARL RSS RYGP A +F+GPVRKWRK WVPI RGN Sbjct: 1 MDTVGARLSRSSTRYGPVGNTASSFSGPVRKWRKAWVPIAAGGAGYAGMMGPMGVSRGNK 60 Query: 238 LILFKWTPFN--------GSNEGDEEQXXXXXXXXXXXXYVPVSVVQDQRQESAKSDDEN 393 ++LF+W P N GS +GDE +VP S V Q S K Sbjct: 61 VVLFRWAPVNGGAAGGGGGSGDGDES----AAVAATRRRFVPASGV---AQNSTK----- 108 Query: 394 KANDGEPSSTETEQSIGKTNIDDILMDESQASDEVRDSGN 513 + STE ++G + DD D +++E RDSG+ Sbjct: 109 -----KSGSTELNLNLGLEDPDDD-SDADLSAEEQRDSGS 142 Score = 30.4 bits (67), Expect = 1.6 Identities = 17/45 (37%), Positives = 25/45 (55%) Frame = +3 Query: 519 GGTDLNLNLGLKDPXXXXXXXXXXXXXXXXXHHRVRTEHRLKRKS 653 G T+LNLNLGL+DP ++ R+++RLKRK+ Sbjct: 111 GSTELNLNLGLEDPDDDSDADLSAEEQRDSGSNQ-RSDNRLKRKA 154
>AK059004:Os09g0284300 | Length = 155 Score = 77.4 bits (189), Expect = 1e-14 Identities = 59/160 (36%), Positives = 75/160 (46%), Gaps = 15/160 (9%) Frame = +1 Query: 79 MEGVGARLGRSSARYGP----AMTFTGPVRKWRKEWVPI---XXXXXXXXXXXXXXRGNN 237 M+ VGARL RSS RYGP A +F+GPVRKWRK WVPI RGN Sbjct: 1 MDTVGARLSRSSTRYGPVGNTASSFSGPVRKWRKAWVPIAAGGAGYAGMMGPMGVSRGNK 60 Query: 238 LILFKWTPFN--------GSNEGDEEQXXXXXXXXXXXXYVPVSVVQDQRQESAKSDDEN 393 ++LF+W P N GS +GDE +VP S V Q S K Sbjct: 61 VVLFRWAPVNGGAAGGGGGSGDGDES----AAVAATRRRFVPASGV---AQNSTK----- 108 Query: 394 KANDGEPSSTETEQSIGKTNIDDILMDESQASDEVRDSGN 513 + STE ++G + DD D +++E RDSG+ Sbjct: 109 -----KSGSTELNLNLGLEDPDDD-SDADLSAEEQRDSGS 142 Score = 30.4 bits (67), Expect = 1.6 Identities = 17/45 (37%), Positives = 25/45 (55%) Frame = +3 Query: 519 GGTDLNLNLGLKDPXXXXXXXXXXXXXXXXXHHRVRTEHRLKRKS 653 G T+LNLNLGL+DP ++ R+++RLKRK+ Sbjct: 111 GSTELNLNLGLEDPDDDSDADLSAEEQRDSGSNQ-RSDNRLKRKA 154
>AK109191:Os08g0338600 | Length = 59 Score = 61.6 bits (148), Expect = 7e-10 Identities = 32/51 (62%), Positives = 37/51 (72%) Frame = +2 Query: 356 IKGKNLPNLMMRTRLMMENLHLRKQSSLLGKLISMIYLWMNPRHQMRFEIL 508 +KGKNL NL M+ R MMEN H K S L+ KLI MI+ WMN RHQMR +IL Sbjct: 1 MKGKNLENLTMKIRQMMENHHPPKLSHLMEKLILMIHQWMNLRHQMRPDIL 51
>Os02g0467500:Os02g0467500 | Length = 836 Score = 31.2 bits (69), Expect = 0.96 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = -1 Query: 786 VTCLSTYTVCQEKYINGPKKGNCSKEYKE 700 + L T T CQ ING KG C+K Y++ Sbjct: 675 IALLETATQCQLWKINGTDKGTCNKRYRD 703
>AK067385:Os03g0304400 | Length = 1462 Score = 28.9 bits (63), Expect = 4.7 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 1/45 (2%) Frame = +1 Query: 382 DDENKAN-DGEPSSTETEQSIGKTNIDDILMDESQASDEVRDSGN 513 D N N DG P +TE + K DI + S+ S V SGN Sbjct: 670 DSGNALNQDGSPLMRKTENVLAKVRTSDISLHSSRKSKLVPSSGN 714
>AK067631:Os03g0183100 | Length = 375 Score = 28.5 bits (62), Expect = 6.2 Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 8/65 (12%) Frame = +1 Query: 340 VSVVQDQRQESAKSDDENKANDGEPSSTET--------EQSIGKTNIDDILMDESQASDE 495 ++ + D QE AK ENKA EP S T +++ ++D I DE ASD Sbjct: 244 INNINDAVQE-AKPTLENKAATDEPDSVSTFEPNSVIEPENLSLDDLDHISDDEPDASDT 302 Query: 496 VRDSG 510 SG Sbjct: 303 DEPSG 307
>AK065516:Os03g0183100 | Length = 375 Score = 28.5 bits (62), Expect = 6.2 Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 8/65 (12%) Frame = +1 Query: 340 VSVVQDQRQESAKSDDENKANDGEPSSTET--------EQSIGKTNIDDILMDESQASDE 495 ++ + D QE AK ENKA EP S T +++ ++D I DE ASD Sbjct: 244 INNINDAVQE-AKPTLENKAATDEPDSVSTFEPNSVIEPENLSLDDLDHISDDEPDASDT 302 Query: 496 VRDSG 510 SG Sbjct: 303 DEPSG 307
>AJ315791:Os03g0183100 | Length = 375 Score = 28.5 bits (62), Expect = 6.2 Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 8/65 (12%) Frame = +1 Query: 340 VSVVQDQRQESAKSDDENKANDGEPSSTET--------EQSIGKTNIDDILMDESQASDE 495 ++ + D QE AK ENKA EP S T +++ ++D I DE ASD Sbjct: 244 INNINDAVQE-AKPTLENKAATDEPDSVSTFEPNSVIEPENLSLDDLDHISDDEPDASDT 302 Query: 496 VRDSG 510 SG Sbjct: 303 DEPSG 307
>AK106074:Os01g0834700 | Length = 428 Score = 28.1 bits (61), Expect = 8.1 Identities = 16/52 (30%), Positives = 32/52 (61%), Gaps = 3/52 (5%) Frame = +1 Query: 358 QRQESAKSDDE--NKAND-GEPSSTETEQSIGKTNIDDILMDESQASDEVRD 504 +RQE +++++E NK D G SST + + +++ +DI +D+ DE+ + Sbjct: 356 ERQEESEANEEPSNKNQDEGPSSSTSNGKEVEESDDEDINIDDDLDIDELNE 407
>AK105183:Os08g0508600 | Length = 198 Score = 28.1 bits (61), Expect = 8.1 Identities = 16/50 (32%), Positives = 25/50 (50%) Frame = +1 Query: 379 SDDENKANDGEPSSTETEQSIGKTNIDDILMDESQASDEVRDSGNLLVEP 528 SDDE+ +DGEPS + E + + + +DE + S V D+ P Sbjct: 145 SDDEDDDDDGEPSMMDNEAG----SAEKMAVDEPKPSKPVPDADGWTTVP 190
>AK101559:Os01g0834700 | Length = 428 Score = 28.1 bits (61), Expect = 8.1 Identities = 16/52 (30%), Positives = 32/52 (61%), Gaps = 3/52 (5%) Frame = +1 Query: 358 QRQESAKSDDE--NKAND-GEPSSTETEQSIGKTNIDDILMDESQASDEVRD 504 +RQE +++++E NK D G SST + + +++ +DI +D+ DE+ + Sbjct: 356 ERQEESEANEEPSNKNQDEGPSSSTSNGKEVEESDDEDINIDDDLDIDELNE 407
>AK066896:Os03g0270200 | Length = 840 Score = 28.1 bits (61), Expect = 8.1 Identities = 11/29 (37%), Positives = 18/29 (62%) Frame = +1 Query: 373 AKSDDENKANDGEPSSTETEQSIGKTNID 459 AK DD++++ DG P + ++ G NID Sbjct: 668 AKIDDDSESEDGSPFRKDKRKAHGNNNID 696
>AK060809:Os03g0270200 | Length = 580 Score = 28.1 bits (61), Expect = 8.1 Identities = 11/29 (37%), Positives = 18/29 (62%) Frame = +1 Query: 373 AKSDDENKANDGEPSSTETEQSIGKTNID 459 AK DD++++ DG P + ++ G NID Sbjct: 408 AKIDDDSESEDGSPFRKDKRKAHGNNNID 436
>AK058413:Os01g0834700 | Length = 76 Score = 28.1 bits (61), Expect = 8.1 Identities = 16/52 (30%), Positives = 32/52 (61%), Gaps = 3/52 (5%) Frame = +1 Query: 358 QRQESAKSDDE--NKAND-GEPSSTETEQSIGKTNIDDILMDESQASDEVRD 504 +RQE +++++E NK D G SST + + +++ +DI +D+ DE+ + Sbjct: 4 ERQEESEANEEPSNKNQDEGPSSSTSNGKEVEESDDEDINIDDDLDIDELNE 55 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 21,136,569 Number of extensions: 417243 Number of successful extensions: 1110 Number of sequences better than 10.0: 14 Number of HSP's gapped: 1101 Number of HSP's successfully gapped: 16 Length of query: 283 Length of database: 15,399,855 Length adjustment: 99 Effective length of query: 184 Effective length of database: 11,435,796 Effective search space: 2104186464 Effective search space used: 2104186464 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
