ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf27j10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LOC_Os08g25080:12008.t02277:unspliced-genomic expressed protein 91 7e-60
2LOC_Os09g11240:12009.t00914:unspliced-genomic expressed protein 41 4e-13
3LOC_Os12g41650:12012.t03841:unspliced-genomic phytochrome-in... 36 0.39
4LOC_Os04g43410:12004.t03885:unspliced-genomic beta-glucosida... 35 0.79
5LOC_Os03g43470:12003.t03742:unspliced-genomic tetratricopept... 35 1.0
6LOC_Os02g26800:12002.t02374:unspliced-genomic ulp1 protease ... 35 1.0
7LOC_Os01g43520:12001.t03867:unspliced-genomic ceramidase, pu... 35 1.0
8LOC_Os11g46870:12011.t04162:unspliced-genomic wall-associate... 34 1.4
9LOC_Os05g02690:12005.t00168:unspliced-genomic SRR1-like prot... 34 1.9
10LOC_Os06g08960:12006.t00775:unspliced-genomic retrotransposo... 31 2.4
11LOC_Os01g39040:12001.t03437:unspliced-genomic conserved hypo... 33 2.6
12LOC_Os10g35210:12010.t02816:unspliced-genomic expressed protein 33 3.6
13LOC_Os09g02284:12009.t00128:unspliced-genomic DNA-directed R... 33 3.6
14LOC_Os10g32990:12010.t02607:unspliced-genomic leucine-rich r... 33 3.6
15LOC_Os06g22370:12006.t02051:unspliced-genomic hypothetical p... 26 4.7
16LOC_Os05g05230:12005.t00413:unspliced-genomic ATP binding pr... 32 4.9
17LOC_Os02g47280:12002.t04313:unspliced-genomic growth-regulat... 32 4.9
18LOC_Os02g41670:12002.t03753:unspliced-genomic phenylalanine ... 28 5.3
19LOC_Os07g46580:12007.t04294:unspliced-genomic ATP-dependent ... 32 6.7
20LOC_Os05g32570:12005.t02853:unspliced-genomic RING E3 ligase... 32 6.7
21LOC_Os06g32400:12006.t02938:unspliced-genomic retrotransposo... 32 6.8
22LOC_Os03g35970:12003.t03074:unspliced-genomic retrotransposo... 32 6.8
23LOC_Os11g33250:12011.t02919:unspliced-genomic expressed protein 31 9.3
24LOC_Os11g19610:12011.t01731:unspliced-genomic retrotransposo... 31 9.3
25LOC_Os03g19190:12003.t01685:unspliced-genomic BRCA1 C Termin... 31 9.3

>LOC_Os08g25080:12008.t02277:unspliced-genomic expressed protein|
          Length = 3483
 Score = 91.3 bits (193), Expect(6) = 7e-60
 Identities = 39/48 (81%), Positives = 42/48 (87%)
 Frame = +1 / +1

                                                            
Query: 340  VSVVQDQRQESAKSDDENKANDGEPSSTETEQSIGKTNIDDILMDESQ 483
            VSVV+D+RQES KSDDENKANDGEPSS ETE S GKTNI+D  MDESQ
Sbjct: 2521 VSVVEDERQESGKSDDENKANDGEPSSAETEPSNGKTNINDTPMDESQ 2664



 Score = 79.0 bits (166), Expect(6) = 7e-60
 Identities = 29/35 (82%), Positives = 32/35 (91%)
 Frame = +1 / +1

                                              
Query: 79  MEGVGARLGRSSARYGPAMTFTGPVRKWRKEWVPI 183
           MEGVGARLGR+SARYG   TFTGPVRKWRK+WVP+
Sbjct: 85  MEGVGARLGRTSARYGTTTTFTGPVRKWRKDWVPV 189



 Score = 61.6 bits (128), Expect(6) = 7e-60
 Identities = 27/35 (77%), Positives = 29/35 (82%)
 Frame = +3 / +2

                                               
Query: 615  HRVRTEHRLKRKSVTPDLEMRM*LAASFIPCILYY 719
            +   TE+RLKRKSV PDLEMRM* AASFIP ILYY
Sbjct: 3233 NNTHTENRLKRKSVAPDLEMRM*PAASFIPWILYY 3337



 Score = 42.8 bits (87), Expect(6) = 7e-60
 Identities = 14/17 (82%), Positives = 16/17 (94%)
 Frame = +1 / +1

                            
Query: 226 RGNNLILFKWTPFNGSN 276
           RGNNL+LFKWTP NG+N
Sbjct: 256 RGNNLVLFKWTPMNGAN 306



 Score = 37.3 bits (75), Expect(6) = 7e-60
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +3 / +2

                          
Query: 519  GGTDLNLNLGLKDP 560
            GGTDLNLNLGLKDP
Sbjct: 3149 GGTDLNLNLGLKDP 3190



 Score = 26.3 bits (51), Expect(6) = 7e-60
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = +3 / +3

                        
Query: 303 GEDGHEKAAVRAG 341
           G +GHE AAVRAG
Sbjct: 363 GGEGHETAAVRAG 401



 Score = 73.0 bits (153), Expect(7) = 6e-49
 Identities = 33/53 (62%), Positives = 38/53 (71%)
 Frame = -3 / -3

                                                                 
Query: 490  LMPGIHP*VYHRY*FSQ*TALFP*MKVLHH*PCSHHQIWQILAFDLELQKPAR 332
            ++P IHP VYH Y*F  * A F  M VLHH P  H QI+QILAF L+LQKPA+
Sbjct: 2671 ILPEIHPLVYH*Y*FFH*MAQFRRMMVLHHLPYFHRQIFQILAFHLQLQKPAK 2513



 Score = 65.7 bits (137), Expect(7) = 6e-49
 Identities = 26/34 (76%), Positives = 29/34 (85%)
 Frame = -2 / -2

                                             
Query: 179 GTHSFRHFLTGPVNVIAGP*RADERPNRAPTPSM 78
           GT S RHFLTGPVNV+  P*RA+ RP+RAPTPSM
Sbjct: 185 GTQSLRHFLTGPVNVVVVP*RAEVRPSRAPTPSM 84



 Score = 59.3 bits (123), Expect(7) = 6e-49
 Identities = 28/35 (80%), Positives = 30/35 (85%)
 Frame = -3 / -1

                                               
Query: 718  **RIQGINEAASYILISRSGVTDFLFNLCSVRTLW 614
            **RIQGINEAA YILISRSG TDFLF+L SV  L+
Sbjct: 3336 **RIQGINEAAGYILISRSGATDFLFSLFSVCVLF 3232



 Score = 36.8 bits (74), Expect(7) = 6e-49
 Identities = 13/14 (92%), Positives = 14/14 (100%)
 Frame = -3 / -1

                          
Query: 559  GSFRPRFKFRSVPP 518
            GSFRP+FKFRSVPP
Sbjct: 3189 GSFRPKFKFRSVPP 3148



 Score = 30.9 bits (61), Expect(7) = 6e-49
 Identities = 12/18 (66%), Positives = 12/18 (66%)
 Frame = -3 / -3

                             
Query: 340 PARTAAFSWPSSPVPSAP 287
           PARTAA SWPS P    P
Sbjct: 400 PARTAAVSWPSPPPRRRP 347



 Score = 30.9 bits (61), Expect(7) = 6e-49
 Identities = 12/19 (63%), Positives = 15/19 (78%)
 Frame = -1 / -1

                              
Query: 276 VGAVKRGPLEQDEVISARS 220
           VGAV RGPLE+ E++ A S
Sbjct: 306 VGAVHRGPLEEHEIVPAGS 250



 Score = 22.1 bits (42), Expect(7) = 6e-49
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3 / -2

                     
Query: 508  QNLEPHLMP 482
            QN+ PHLMP
Sbjct: 3137 QNIGPHLMP 3111



 Score = 63.4 bits (132), Expect(6) = 4e-31
 Identities = 30/48 (62%), Positives = 33/48 (68%)
 Frame = -1 / -1

                                                            
Query: 483  LGFIHKYIIDISFPNRLLCFRR*RFSIISLVLIIRFGRFLPLILNYRN 340
            L FIH  II+ISF  R L F  * FSII L+ I+RF RFLP I NYRN
Sbjct: 2664 LRFIHWCIINISFSIRWLSFGG*WFSIICLIFIVRFSRFLPFIFNYRN 2521



 Score = 57.0 bits (118), Expect(6) = 4e-31
 Identities = 22/31 (70%), Positives = 26/31 (83%)
 Frame = -2 / -3

                                           
Query: 719  VVKNTRNK*SRQLHSHLEVRGNRFPLQSVFC 627
            +VKN RNK*S +LHSHL+VR  RFPLQ +FC
Sbjct: 3337 IVKNPRNK*SSRLHSHLKVRSYRFPLQPIFC 3245



 Score = 34.5 bits (69), Expect(6) = 4e-31
 Identities = 14/23 (60%), Positives = 16/23 (69%)
 Frame = -1 / -1

                                  
Query: 141 ERHRGAVTGRRTP*SRANTLHGK 73
           ER RGAV GR  P  RA+ LHG+
Sbjct: 147 ERRRGAVAGRGAPEPRAHALHGE 79



 Score = 30.4 bits (60), Expect(6) = 4e-31
 Identities = 12/18 (66%), Positives = 12/18 (66%)
 Frame = -2 / -2

                             
Query: 275 LEPLNGVHLNRMRLFPRD 222
           L P  GVHL   RLFPRD
Sbjct: 305 LAPFIGVHLKSTRLFPRD 252



 Score = 28.1 bits (55), Expect(6) = 4e-31
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -1 / -2

                           
Query: 561  RGLSDPGSNLGRFHQ 517
            +G SDP  NLGRFH+
Sbjct: 3191 QGPSDPSLNLGRFHR 3147



 Score = 25.4 bits (49), Expect(6) = 4e-31
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2 / -2

                                    
Query: 341 TGTYRRLLVAVFAGAVCSSSPSLEP 267
           TGTYRR  VA  + A  +++ +  P
Sbjct: 401 TGTYRRRFVAFSSSAAAAAAAAWSP 327



 Score = 64.8 bits (135), Expect(5) = 9e-30
 Identities = 30/48 (62%), Positives = 34/48 (70%)
 Frame = +2 / +2

                                                            
Query: 341  FL*FKIKGKNLPNLMMRTRLMMENLHLRKQSSLLGKLISMIYLWMNPR 484
            FL* K+KGKNL NL M+ R MMEN H  K S L+ KLI MI+ WMN R
Sbjct: 2522 FL*LKMKGKNLENLTMKIRQMMENHHPPKLSHLMEKLILMIHQWMNLR 2665



 Score = 49.6 bits (102), Expect(5) = 9e-30
 Identities = 21/32 (65%), Positives = 24/32 (75%)
 Frame = +3 / +3

                                           
Query: 78  HGGCWRAIRAFVGPLRPRDDVHRAR*EVAEGM 173
           HGG  RA RA +GPLR  DDVH AR EVA+G+
Sbjct: 84  HGGRGRAARAHLGPLRHHDDVHGARQEVAQGL 179



 Score = 46.9 bits (96), Expect(5) = 9e-30
 Identities = 23/34 (67%), Positives = 25/34 (73%)
 Frame = +2 / +1

                                              
Query: 617  QGSNRTQIEEEICYP*PRDENVTGGFIYSLYSLL 718
            Q ++R   EEEIC  *P DENVTG FIYSL SLL
Sbjct: 3235 QHTHRK*AEEEICSS*P*DENVTGCFIYSLDSLL 3336



 Score = 29.5 bits (58), Expect(5) = 9e-30
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = +2 / +1

                         
Query: 521  WNRPKFEPGSERP 559
            WNRPKF+ GSE P
Sbjct: 3151 WNRPKFKLGSEGP 3189



 Score = 24.9 bits (48), Expect(5) = 9e-30
 Identities = 12/19 (63%), Positives = 12/19 (63%)
 Frame = +2 / +2

                              
Query: 221 DLAEITSSCSSGPRLTAPT 277
           D A   S  SSGPR TAPT
Sbjct: 251 DPAGTISCSSSGPR*TAPT 307



 Score = 57.9 bits (120), Expect(3) = 3e-11
 Identities = 32/50 (64%), Positives = 36/50 (72%)
 Frame = +3 / +3

                                                              
Query: 336  AGFCSSRSKARICQI***EQG**WRTFIYGNRAVYWEN*YR*YTYG*IPG 485
            AGFCS R KARI +I* *+ G *WRT I  N A+ W+N*Y *YT G*I G
Sbjct: 2517 AGFCS*R*KARIWKI*R*K*GK*WRTIIRRN*AI*WKN*Y**YTNG*ISG 2666



 Score = 28.6 bits (56), Expect(3) = 3e-11
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = +1 / +3

                           
Query: 514  LLVEPT*I*TWV*KT 558
            + VEPT*I*TWV*+T
Sbjct: 3144 MAVEPT*I*TWV*RT 3188



 Score = 26.7 bits (52), Expect(3) = 3e-11
 Identities = 14/23 (60%), Positives = 14/23 (60%)
 Frame = +1 / +3

                                   
Query: 616  TGFEQNTD*RGNLLPLTSR*ECN 684
            T   Q   *RGNL  LT R*ECN
Sbjct: 3234 TTHTQKIG*RGNL*LLTLR*ECN 3302



 Score = 27.6 bits (54), Expect(4) = 0.004
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = -1 / -2

                          
Query: 717  SKEYKE*MKPPVTF 676
            SKE KE*MK PVTF
Sbjct: 3335 SKESKE*MKQPVTF 3294



 Score = 26.7 bits (52), Expect(4) = 0.004
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = -2 / -2

                          
Query: 452  LVFPIDCSVSVDEG 411
            LVFP+D SVS D+G
Sbjct: 2633 LVFPLDGSVSADDG 2592



 Score = 25.4 bits (49), Expect(4) = 0.004
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3 / -3

                           
Query: 124 RNGPTNALIARQHPPW 77
           R+GP  A  AR  PPW
Sbjct: 130 RSGPRCARAARPRPPW 83



 Score = 23.1 bits (44), Expect(4) = 0.004
 Identities = 12/16 (75%), Positives = 12/16 (75%)
 Frame = -2 / -3

                            
Query: 557  VFQTQVQI*VGSTNKF 510
            V QTQV I*VGST  F
Sbjct: 3187 VLQTQV*I*VGSTAIF 3140



to top

>LOC_Os09g11240:12009.t00914:unspliced-genomic expressed protein|
          Length = 2798

 Score = 41.4 bits (84), Expect(4) = 4e-13
 Identities = 14/18 (77%), Positives = 16/18 (88%)
 Frame = +1 / +1

                             
Query: 130 AMTFTGPVRKWRKEWVPI 183
           A +F+GPVRKWRK WVPI
Sbjct: 208 ASSFSGPVRKWRKAWVPI 261



 Score = 33.1 bits (66), Expect(4) = 4e-13
 Identities = 13/17 (76%), Positives = 14/17 (82%)
 Frame = +1 / +1

                            
Query: 79  MEGVGARLGRSSARYGP 129
           M+ VGARL RSS RYGP
Sbjct: 145 MDTVGARLSRSSTRYGP 195



 Score = 32.7 bits (65), Expect(4) = 4e-13
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +1 / +1

                              
Query: 226 RGNNLILFKWTPFNGSNEG 282
           RGN ++LF+W P NG   G
Sbjct: 313 RGNKVVLFRWAPVNGGAAG 369



 Score = 30.9 bits (61), Expect(4) = 4e-13
 Identities = 11/14 (78%), Positives = 13/14 (92%)
 Frame = +3 / +2

                          
Query: 519  GGTDLNLNLGLKDP 560
            G T+LNLNLGL+DP
Sbjct: 2321 GSTELNLNLGLEDP 2362



 Score = 29.9 bits (59), Expect(3) = 7e-05
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = -2 / -1

                         
Query: 182 MGTHSFRHFLTGPV 141
           MGT + RHFLTGP+
Sbjct: 260 MGTQALRHFLTGPL 219



 Score = 26.3 bits (51), Expect(3) = 7e-05
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -2 / -1

                             
Query: 281 PSLEPLNGVHLNRMRLFP 228
           P+  P  G HLN   LFP
Sbjct: 368 PAAPPFTGAHLNSTTLFP 315



 Score = 26.3 bits (51), Expect(3) = 7e-05
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = -2 / -1

                            
Query: 128 GP*RADERPNRAPTPSM 78
           GP R DER  RAPT S+
Sbjct: 194 GPYRVDERLRRAPTVSI 144



to top

>LOC_Os12g41650:12012.t03841:unspliced-genomic phytochrome-interacting factor 4, putative, expressed|
          Length = 4317

 Score = 35.9 bits (72), Expect = 0.39
 Identities = 16/44 (36%), Positives = 26/44 (59%)
 Frame = +3 / +1

                                                        
Query: 693  SFIPCILYYSFPFLGHLYIFLDILYTWRDK*QNHNYIVKRLHCV 824
            SF+ C+ YY FPF   L ++  ++Y ++      N I+ RL+CV
Sbjct: 4135 SFLLCM*YYFFPFGETLVMYQLLMYLFKFMPTRANCIIIRLNCV 4266



to top

>LOC_Os04g43410:12004.t03885:unspliced-genomic beta-glucosidase homolog precursor, putative, expressed|
          Length = 4378

 Score = 34.5 bits (69), Expect(2) = 0.79
 Identities = 15/49 (30%), Positives = 27/49 (55%)
 Frame = -1 / -3

                                                             
Query: 480  GFIHKYIIDISFPNRLLCFRR*RFSIISLVLIIRFGRFLPLILNYRNRH 334
            GF   Y ++++    L+CF     S++ +V+ I FG  L + + + NRH
Sbjct: 2171 GFFSFYFLEVTATALLVCFTSYMTSLLLIVIRILFGVSLTIFICHINRH 2025



 Score = 22.6 bits (43), Expect(2) = 0.79
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2 / -3

                                  
Query: 839  FLVFGNTMQAFHYVVVILLLVS 774
            FL+F +  Q FH  + I  L S
Sbjct: 3320 FLIFNSEFQLFHNCISIWTLYS 3255



to top

>LOC_Os03g43470:12003.t03742:unspliced-genomic tetratricopeptide-like helical, putative, expressed|
          Length = 1584

 Score = 34.5 bits (69), Expect = 1.0
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = -2 / +3

                                            
Query: 326 RLLVAVFAGAVCSSSPSLEPLNGVHLNRMRLFP 228
           RLLV++ A AV    PS  PL G+HL   R+ P
Sbjct: 21  RLLVSLLAVAVAGEQPSSPPLVGLHLRLPRIPP 119



to top

>LOC_Os02g26800:12002.t02374:unspliced-genomic ulp1 protease family, C-terminal catalytic domain containing protein,|
            expressed
          Length = 3751

 Score = 34.5 bits (69), Expect = 1.0
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -1 / +2

                                         
Query: 786  VTCLSTYTVCQEKYINGPKKGNCSKEYKE 700
            +  L T T CQ   ING  KG C+K Y++
Sbjct: 2720 IALLETATQCQLWKINGTDKGTCNKRYRD 2806



to top

>LOC_Os01g43520:12001.t03867:unspliced-genomic ceramidase, putative, expressed|
          Length = 10513

 Score = 34.5 bits (69), Expect = 1.0
 Identities = 17/54 (31%), Positives = 28/54 (51%)
 Frame = -1 / +3

                                                                  
Query: 483  LGFIHKYIIDISFPNRLLCFRR*RFSIISLVLIIRFGRFLPLILNYRNRHVPPP 322
            +GFI  Y +++     L+CF     S++ +V+ I FG  L + +   NRH   P
Sbjct: 8154 MGFIFFYFLEVPATALLVCFTACLSSLLLIVIRILFGVLLIVFICRINRHHSTP 8315



to top

>LOC_Os11g46870:12011.t04162:unspliced-genomic wall-associated kinase 2, putative|
          Length = 6146

 Score = 34.1 bits (68), Expect = 1.4
 Identities = 17/42 (40%), Positives = 21/42 (50%)
 Frame = -3 / -3

                                                      
Query: 409  LHH*PCSHHQIWQILAFDLELQKPARTAAFSWPSSPVPSAPH 284
            LHH*  +H  +  +    L L      A FS  SSP+PS PH
Sbjct: 4500 LHH*YLAHLSLHSLFELVLYLAGYKSIACFSSLSSPLPSTPH 4375



to top

>LOC_Os05g02690:12005.t00168:unspliced-genomic SRR1-like protein, putative, expressed|
          Length = 1027

 Score = 33.6 bits (67), Expect = 1.9
 Identities = 15/24 (62%), Positives = 16/24 (66%)
 Frame = +3 / -3

                                   
Query: 273 QRRR*GADGTGEDGHEKAAVRAGF 344
           QRRR GA G GEDG E+  V  GF
Sbjct: 512 QRRRRGALGRGEDGVEEVGVGGGF 441



 Score = 32.2 bits (64), Expect = 4.9
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -3 / +1

                                              
Query: 346 QKPARTAAFSWPSSPVPSAPHLLRWSR*TGST*TG 242
           + P  T   S PSSP PSAP   RW+    ++ TG
Sbjct: 439 RNPPPTPTSSTPSSPRPSAPRRRRWASPCQASTTG 543



to top

>LOC_Os06g08960:12006.t00775:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass|
          Length = 8068

 Score = 31.3 bits (62), Expect(2) = 2.4
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = +3 / -1

                                   
Query: 273  QRRR*GADGTGEDGHEKAAVRAG 341
            +RRR   DG GEDG   AA +AG
Sbjct: 7651 RRRRAAGDGEGEDGDAVAAAKAG 7583



 Score = 24.9 bits (48), Expect(2) = 2.4
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +2 / -1

                                     
Query: 680  VTGGFIYSLYSLLQFPFFGPFIYFS 754
            +TGG +Y L+SLL F    P +  S
Sbjct: 3763 LTGGPLYPLFSLLFFYLSAPSLSLS 3689



to top

>LOC_Os01g39040:12001.t03437:unspliced-genomic conserved hypothetical protein|
          Length = 1071

 Score = 33.1 bits (66), Expect = 2.6
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -3 / -2

                                         
Query: 340 PARTAAFSWPSSPVPSAPHLLRWSR*TGST 251
           P R   FSW S+P P +  +  W+  TGST
Sbjct: 959 PRRMPVFSWRSAPEPPSTPMPAWAPLTGST 870



to top

>LOC_Os10g35210:12010.t02816:unspliced-genomic expressed protein|
          Length = 4204

 Score = 32.7 bits (65), Expect = 3.6
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +3 / +1

                                                      
Query: 696  FIPCILYYSFPFLGHLYIFLDILYTWRDK*QNHNYIVKRLHC 821
            +I CI  +SFP +  +YI L ++      *Q H ++ K  HC
Sbjct: 3013 YIGCICRFSFPSITRMYICLCMVGDLAVT*QMHFFLCKGGHC 3138



to top

>LOC_Os09g02284:12009.t00128:unspliced-genomic DNA-directed RNA polymerase II 36 kDa polypeptide A, putative,|
            expressed
          Length = 7020

 Score = 32.7 bits (65), Expect = 3.6
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +3 / +3

                                    
Query: 744  YIFLDILYTWRDK*QNHNYIVKRL 815
            +++L ILY W  K   HN+I+K++
Sbjct: 4605 HLYLYILYNWNQKLDMHNHIIKKI 4676



to top

>LOC_Os10g32990:12010.t02607:unspliced-genomic leucine-rich repeat receptor protein kinase EXS precursor, putative,|
            expressed
          Length = 5481

 Score = 32.7 bits (65), Expect = 3.6
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = -1 / +1

                                                            
Query: 465  YIIDISFPNRLLCFRR*RFSIISLVLIIRFGRFLPLILNYRNRHVPPP 322
            Y +++S    L+CF     S++ +V+ I FG  L + +   NRH   P
Sbjct: 3616 YFLEVSATALLVCFTAYLTSLLLIVIRILFGVLLTIFICRINRHYSTP 3759



to top

>LOC_Os06g22370:12006.t02051:unspliced-genomic hypothetical protein|
          Length = 2325

 Score = 26.3 bits (51), Expect(2) = 4.7
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +2 / -3

                                         
Query: 401  MMENLHLRKQSSLLGKLISMIYLWMNPRH 487
            +M+ LH++K SSL  +L+S I+   +  H
Sbjct: 1708 LMDGLHVQKHSSL*FQLLSSIFRCSHRTH 1622



 Score = 23.1 bits (44), Expect(2) = 4.7
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +2 / -1

                                
Query: 485  HQMRFEILEICWWNRPKFEP 544
            H +R     +C  NRP F P
Sbjct: 1635 HTVRISPHPVCCHNRPTFHP 1576



to top

>LOC_Os05g05230:12005.t00413:unspliced-genomic ATP binding protein, putative, expressed|
          Length = 10580

 Score = 32.2 bits (64), Expect = 4.9
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +3 / +2

                              
Query: 720  SFPFLGHLYIFLDILYTW 773
            +FP L H+Y+FLDI   W
Sbjct: 4832 AFPLLEHMYLFLDIFLLW 4885



to top

>LOC_Os02g47280:12002.t04313:unspliced-genomic growth-regulating factor, putative, expressed|
          Length = 3824

 Score = 32.2 bits (64), Expect = 4.9
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +3 / -2

                                           
Query: 720  SFPFLGHLYIFLDILYTWRDK*QNHNYIVKR 812
            S P+ GH Y+FL I   WR K Q    +V R
Sbjct: 1015 SDPYAGHSYLFLAIAQKWRAKKQFARVLVHR 923



to top

>LOC_Os02g41670:12002.t03753:unspliced-genomic phenylalanine ammonia-lyase, putative, expressed|
          Length = 2588

 Score = 28.1 bits (55), Expect(2) = 5.3
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -3 / -2

                                           
Query: 376 WQILAFDLELQKPARTAAFSWPSSPVPSAPHL 281
           W+ +     +     +A  +WPS PVP AP L
Sbjct: 640 WRRVLMRTSIAARVASADRTWPSVPVPKAPAL 545



 Score = 25.4 bits (49), Expect(2) = 5.3
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3 / -1

                          
Query: 412  VLHH*PCSHHQIWQ 371
            VLH  PC  H+ WQ
Sbjct: 2063 VLHSCPCGQHRRWQ 2022



to top

>LOC_Os07g46580:12007.t04294:unspliced-genomic ATP-dependent RNA helicase DDX47, putative|
          Length = 3849

 Score = 31.8 bits (63), Expect = 6.7
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +3 / +2

                                               
Query: 252 VDPV*RLQRRR*GADGTGEDGHEKAAVRAGFCSSRS 359
           +D + R  R R GADG GEDG  +AA   G   +R+
Sbjct: 128 IDWMCREGRDRRGADGVGEDGGVRAADHPGAARARA 235



to top

>LOC_Os05g32570:12005.t02853:unspliced-genomic RING E3 ligase protein, putative, expressed|
          Length = 6772

 Score = 31.8 bits (63), Expect = 6.7
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +3 / -3

                                       
Query: 684 LAASFIPCILYYSFPFLGHLYIFLDILY 767
           L  ++IP + ++SFPFL  + + L IL+
Sbjct: 707 LLGNYIPVVSFFSFPFLFFVLLLLSILH 624



to top

>LOC_Os06g32400:12006.t02938:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 1983

 Score = 31.8 bits (63), Expect = 6.8
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +1 / +1

                                             
Query: 364  QESAKSDDENKANDGEPSSTETEQSIGKTNIDD 462
            +ES+ SDD++  +DG+   TE       T++D+
Sbjct: 1801 EESSHSDDDDNDDDGDEGDTEAAAEDAPTDVDE 1899



to top

>LOC_Os03g35970:12003.t03074:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 4577

 Score = 31.8 bits (63), Expect = 6.8
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -1 / -1

                                                  
Query: 813  GVSLCSCDSVTCLSTYTVCQEKYINGPKKGNCSKEYKE 700
            GV  C C  +   +T ++ QEK +   +K  C K+Y E
Sbjct: 2561 GVPRCHCPDL*IENTNSIRQEKQMRSEQK*KCEKKYPE 2448



to top

>LOC_Os11g33250:12011.t02919:unspliced-genomic expressed protein|
          Length = 1956

 Score = 31.3 bits (62), Expect = 9.3
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +1 / -3

                                          
Query: 94   ARLGRSSARYGPAMTFTGPVRKWRKEWVPI 183
            AR GRS+AR     T   P R+ R+ W P+
Sbjct: 1054 ARRGRSAARSPRT*TIGAPARRSRRSWSPV 965



to top

>LOC_Os11g19610:12011.t01731:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 7399

 Score = 31.3 bits (62), Expect = 9.3
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +1 / +2

                                             
Query: 364  QESAKSDDENKANDGEPSSTETEQSIGKTNIDD 462
            +ES+ SDD++  +DG+   TE       T++D+
Sbjct: 7223 EESSHSDDDDDDDDGDEGDTEAAAEDAPTDVDE 7321



to top

>LOC_Os03g19190:12003.t01685:unspliced-genomic BRCA1 C Terminus domain containing protein, expressed|
          Length = 7338

 Score = 31.3 bits (62), Expect = 9.3
 Identities = 16/54 (29%), Positives = 24/54 (44%)
 Frame = +1 / +1

                                                                  
Query: 352  QDQRQESAKSDDENKANDGEPSSTETEQSIGKTNIDDILMDESQASDEVRDSGN 513
            Q++  + A+        DG P   +TE  + K    DI +  S+ S  V  SGN
Sbjct: 4375 QNKDGDYAQDSGNALNQDGSPLMRKTENVLAKVRTSDISLHSSRKSKLVPSSGN 4536


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 287,461,271
Number of extensions: 4047129
Number of successful extensions: 15757
Number of sequences better than 10.0: 25
Length of query: 283
Length of database: 55,613,886
Length adjustment: 49
Effective length of query: 234
Effective length of database: 52,856,264
Effective search space: 12368365776
Effective search space used: 12368365776
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
to top