ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf27j10 |
|---|---|
| Clone Library Name | barley_pub |
>Q9AJ80:SCA4_RICSL Antigenic heat-stable 120 kDa protein - Rickettsia slovaca| Length = 1012 Score = 34.7 bits (78), Expect = 0.49 Identities = 21/54 (38%), Positives = 31/54 (57%) Frame = +1 Query: 340 VSVVQDQRQESAKSDDENKANDGEPSSTETEQSIGKTNIDDILMDESQASDEVR 501 + ++++++ES K DE G SSTE +QS KTN L+D+ S EVR Sbjct: 872 LKTLEEKKEESIKKVDELVKAFGTKSSTEEQQSFIKTN----LIDDKTLSKEVR 921
>Q9AJ75:SCA4_RICPA Antigenic heat-stable 120 kDa protein - Rickettsia parkeri| Length = 1010 Score = 34.7 bits (78), Expect = 0.49 Identities = 21/54 (38%), Positives = 31/54 (57%) Frame = +1 Query: 340 VSVVQDQRQESAKSDDENKANDGEPSSTETEQSIGKTNIDDILMDESQASDEVR 501 + ++++++ES K DE G SSTE +QS KTN L+D+ S EVR Sbjct: 870 LKTLEEKKEESIKKVDELVKAFGTKSSTEEQQSFIKTN----LIDDKTLSKEVR 919
>Q9AJ82:SCA4_RICMN Antigenic heat-stable 120 kDa protein - Rickettsia mongolotimonae| Length = 1011 Score = 34.7 bits (78), Expect = 0.49 Identities = 21/54 (38%), Positives = 31/54 (57%) Frame = +1 Query: 340 VSVVQDQRQESAKSDDENKANDGEPSSTETEQSIGKTNIDDILMDESQASDEVR 501 + ++++++ES K DE G SSTE +QS KTN L+D+ S EVR Sbjct: 871 LKTLEEKKEESIKKVDELVKAFGTKSSTEEQQSFIKTN----LIDDKTLSKEVR 920
>Q9AJ83:SCA4_RICAF Antigenic heat-stable 120 kDa protein - Rickettsia africae| Length = 1028 Score = 34.7 bits (78), Expect = 0.49 Identities = 21/54 (38%), Positives = 31/54 (57%) Frame = +1 Query: 340 VSVVQDQRQESAKSDDENKANDGEPSSTETEQSIGKTNIDDILMDESQASDEVR 501 + ++++++ES K DE G SSTE +QS KTN L+D+ S EVR Sbjct: 882 LKTLEEKKEESIKKVDELVKAFGTKSSTEEQQSFIKTN----LIDDKTLSKEVR 931
>Q9AJ77:SCA4_RICSI Antigenic heat-stable 120 kDa protein - Rickettsia sibirica| Length = 991 Score = 33.5 bits (75), Expect = 1.1 Identities = 21/54 (38%), Positives = 30/54 (55%) Frame = +1 Query: 340 VSVVQDQRQESAKSDDENKANDGEPSSTETEQSIGKTNIDDILMDESQASDEVR 501 + + ++++ES K DE G SSTE +QS KTN L+D+ S EVR Sbjct: 851 LKTLAEKKEESIKKVDELVKAFGTKSSTEEQQSFIKTN----LIDDKTLSKEVR 900
>Q52658:SCA4_RICCN Antigenic heat-stable 120 kDa protein - Rickettsia conorii| Length = 1022 Score = 33.5 bits (75), Expect = 1.1 Identities = 20/54 (37%), Positives = 31/54 (57%) Frame = +1 Query: 340 VSVVQDQRQESAKSDDENKANDGEPSSTETEQSIGKTNIDDILMDESQASDEVR 501 + ++++++E+ K DE G SSTE +QS KTN L+D+ S EVR Sbjct: 876 LKTLEEKKEEAIKKVDELVKAFGTKSSTEEQQSFIKTN----LIDDKTLSKEVR 925
>Q5UQ57:UBC2_MIMIV Probable ubiquitin-conjugating enzyme E2 L709 - Mimivirus| Length = 388 Score = 33.1 bits (74), Expect = 1.4 Identities = 17/57 (29%), Positives = 31/57 (54%) Frame = +1 Query: 343 SVVQDQRQESAKSDDENKANDGEPSSTETEQSIGKTNIDDILMDESQASDEVRDSGN 513 SV + Q+S ++EN +D S +E++ ++DD++ D Q SD+ DS + Sbjct: 210 SVKSKKNQKSDSEEEENSDDDNTDSDSESDDF---RDLDDVVDDSDQESDDESDSSS 263
>Q8CU95:SYS_STAES Seryl-tRNA synthetase - Staphylococcus epidermidis (strain ATCC| 12228) Length = 428 Score = 32.7 bits (73), Expect = 1.9 Identities = 16/59 (27%), Positives = 29/59 (49%) Frame = +1 Query: 349 VQDQRQESAKSDDENKANDGEPSSTETEQSIGKTNIDDILMDESQASDEVRDSGNLLVE 525 + +QR+E +E KA + S ++ K + DD++ + DE++D N L E Sbjct: 34 LDEQRRELISKTEEMKAKRNKVSEEIAQKKRNKEDADDVIAEMRHLGDEIKDIDNQLNE 92
>Q5HK07:SYS_STAEQ Seryl-tRNA synthetase - Staphylococcus epidermidis (strain ATCC| 35984 / RP62A) Length = 428 Score = 32.7 bits (73), Expect = 1.9 Identities = 16/59 (27%), Positives = 29/59 (49%) Frame = +1 Query: 349 VQDQRQESAKSDDENKANDGEPSSTETEQSIGKTNIDDILMDESQASDEVRDSGNLLVE 525 + +QR+E +E KA + S ++ K + DD++ + DE++D N L E Sbjct: 34 LDEQRRELISKTEEMKAKRNKVSEEIAQKKRNKEDADDVIAEMRHLGDEIKDIDNQLNE 92
>Q9R0G7:ZEB2_MOUSE Zinc finger E-box-binding homeobox 2 - Mus musculus (Mouse)| Length = 1215 Score = 31.6 bits (70), Expect = 4.2 Identities = 13/54 (24%), Positives = 26/54 (48%) Frame = +1 Query: 355 DQRQESAKSDDENKANDGEPSSTETEQSIGKTNIDDILMDESQASDEVRDSGNL 516 D+ +E + + ENK+ D +P + E+ G ++DD D + + N+ Sbjct: 1157 DEEEEEEEEESENKSMDTDPETIRDEEETGDHSMDDSSEDGKMETKSDHEEDNM 1210
>Q01550:TANA_XENLA Tanabin - Xenopus laevis (African clawed frog)| Length = 1744 Score = 31.2 bits (69), Expect = 5.4 Identities = 18/64 (28%), Positives = 33/64 (51%) Frame = +1 Query: 334 VPVSVVQDQRQESAKSDDENKANDGEPSSTETEQSIGKTNIDDILMDESQASDEVRDSGN 513 VP +V QE+ ++EN DGE T+++I + D +L+ + +E + S + Sbjct: 737 VPDTVKFMYPQENNLLEEENVYGDGELVQMATDENIINQSSDQLLLSDHSHHEETKTSES 796 Query: 514 LLVE 525 + VE Sbjct: 797 IAVE 800
>O74161:CHS5_CANAL Chitin biosynthesis protein CHS5 - Candida albicans (Yeast)| Length = 562 Score = 31.2 bits (69), Expect = 5.4 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 12/62 (19%) Frame = +1 Query: 343 SVVQDQRQESAKSD---------DEN---KANDGEPSSTETEQSIGKTNIDDILMDESQA 486 +V +RQE+A D DEN A + EP+STE +S+ TN+++ +E+ Sbjct: 453 TVNNTERQETATDDAFDTVPLEGDENIATAAKETEPTSTEPTESVNVTNVNNSASEEAGK 512 Query: 487 SD 492 D Sbjct: 513 DD 514
>Q29000:IGF1R_PIG Insulin-like growth factor 1 receptor - Sus scrofa (Pig)| Length = 304 Score = 30.8 bits (68), Expect = 7.1 Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 7/43 (16%) Frame = +2 Query: 437 LLGKLISMIYLWMNPRHQMR-------FEILEICWWNRPKFEP 544 ++G L+ M+Y++ R+ R FE++ +CW PK P Sbjct: 162 IVGGLVIMLYVFHRKRNNSRLGNGVMLFELMRMCWQYNPKMRP 204
>O13923:CORO_SCHPO Coronin-like protein crn1 - Schizosaccharomyces pombe (Fission| yeast) Length = 601 Score = 30.8 bits (68), Expect = 7.1 Identities = 17/44 (38%), Positives = 24/44 (54%) Frame = +1 Query: 337 PVSVVQDQRQESAKSDDENKANDGEPSSTETEQSIGKTNIDDIL 468 P+S + +R ES +SD A G+PS T E + GK D+L Sbjct: 347 PISFIVPRRSESFQSDIYPPAPSGKPSLTAEEWASGKDAQPDLL 390 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 130,111,433 Number of extensions: 2512432 Number of successful extensions: 5755 Number of sequences better than 10.0: 14 Number of HSP's gapped: 5746 Number of HSP's successfully gapped: 14 Length of query: 283 Length of database: 100,686,439 Length adjustment: 112 Effective length of query: 171 Effective length of database: 69,965,399 Effective search space: 11964083229 Effective search space used: 11964083229 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
