ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf24k01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001056189.1| Oryza sativa (japonica cultivar-group) Os03g0266000 (Os03g0266000) mRNA, complete cds Length = 954 Score = 373 bits (188), Expect = e-100 Identities = 428/508 (84%) Strand = Plus / Plus Query: 205 cctcgctgaggggcggctggtcggcggcgctgaacaaggtggagcactacggggtccaga 264 |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 229 cctccctgaggggcgggtggtcgggggcgctgaacaaggtggagcactacggggtccaga 288 Query: 265 gagtcaccggcgatggacggtgcatgtttcgagccttggctaagggaatggcaaagacca 324 | ||||| || ||||| |||||||||||||| || |||| || ||||||||||||| || Sbjct: 289 gggtcacgggtgatggccggtgcatgtttcgggcgttggtgaaaggaatggcaaagaaca 348 Query: 325 ggggaattccattgaccccaagggaggaggtacaagatgcagacgacttacggctggcag 384 ||| |||||||||||| ||||||||||||||||||||||||| || |||||| |||||| Sbjct: 349 aggggattccattgacctcaagggaggaggtacaagatgcagatgatttacggatggcag 408 Query: 385 tgaaagaagttatatgtgacaaccaaaccgagcgtcaaaagtatgaagaggcaattatag 444 | ||||||||||| || || | | || || || ||||| |||||||||||| |||||| Sbjct: 409 taaaagaagttatctgcgatgatgagactgaacgacaaaaatatgaagaggcagttatag 468 Query: 445 ccattacagtggatgaatctttgaaacgatactgccaaaggataaggcgacctgattttt 504 | ||||| ||||||||||| |||| || |||||||| || ||||||||| ||||||| | Sbjct: 469 caattactgtggatgaatcattgaggcgctactgccatagaataaggcgatctgatttct 528 Query: 505 ggggcggagagtcagaactcttggttttgtctagactgtgccggcaaccaatcattattt 564 |||| |||||||||||||||||||||||||||| | |||| ||||| ||||||||||||| Sbjct: 529 ggggtggagagtcagaactcttggttttgtctaaattgtgtcggcagccaatcattattt 588 Query: 565 acattccggagcgtgagtaccgcggacggggcaacgggtttatcccaattgccgagtacg 624 | ||||| ||||||||||||| || || || || || ||||| || || || ||||| | Sbjct: 589 atattccagagcgtgagtaccatgggcgtggaaatggttttattcctatagcagagtatg 648 Query: 625 ggttggagtttaccaaagactcaaaagaggggaagaaacgggtgccggtgaggctattat 684 | |||| || |||| ||||||||| || |||||||| |||||| || || || |||| Sbjct: 649 gactggaattctccaaggactcaaaacagtggaagaaaaaggtgccagtaagactgttat 708 Query: 685 acagcgggaagaaccactatgatctgct 712 |||| |||| ||| || |||||| |||| Sbjct: 709 acagtgggaggaatcattatgatttgct 736 Score = 75.8 bits (38), Expect = 2e-10 Identities = 77/90 (85%) Strand = Plus / Plus Query: 69 atggcgccaccggtgcggccatccaatgccacgcttctcgctcggctcggggagggcacg 128 ||||||| | |||||||||| | ||||||||| |||||||| |||||| | || ||| | Sbjct: 69 atggcgcaagcggtgcggccgtgcaatgccacccttctcgcgcggctccgtgacggcgag 128 Query: 129 gccaggttcgagctcctcgaggaccccgcg 158 || ||||||||||||||||||||| ||||| Sbjct: 129 gcgaggttcgagctcctcgaggactccgcg 158
>dbj|AK104949.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-109-H02, full insert sequence Length = 912 Score = 373 bits (188), Expect = e-100 Identities = 428/508 (84%) Strand = Plus / Plus Query: 205 cctcgctgaggggcggctggtcggcggcgctgaacaaggtggagcactacggggtccaga 264 |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 221 cctccctgaggggcgggtggtcgggggcgctgaacaaggtggagcactacggggtccaga 280 Query: 265 gagtcaccggcgatggacggtgcatgtttcgagccttggctaagggaatggcaaagacca 324 | ||||| || ||||| |||||||||||||| || |||| || ||||||||||||| || Sbjct: 281 gggtcacgggtgatggccggtgcatgtttcgggcgttggtgaaaggaatggcaaagaaca 340 Query: 325 ggggaattccattgaccccaagggaggaggtacaagatgcagacgacttacggctggcag 384 ||| |||||||||||| ||||||||||||||||||||||||| || |||||| |||||| Sbjct: 341 aggggattccattgacctcaagggaggaggtacaagatgcagatgatttacggatggcag 400 Query: 385 tgaaagaagttatatgtgacaaccaaaccgagcgtcaaaagtatgaagaggcaattatag 444 | ||||||||||| || || | | || || || ||||| |||||||||||| |||||| Sbjct: 401 taaaagaagttatctgcgatgatgagactgaacgacaaaaatatgaagaggcagttatag 460 Query: 445 ccattacagtggatgaatctttgaaacgatactgccaaaggataaggcgacctgattttt 504 | ||||| ||||||||||| |||| || |||||||| || ||||||||| ||||||| | Sbjct: 461 caattactgtggatgaatcattgaggcgctactgccatagaataaggcgatctgatttct 520 Query: 505 ggggcggagagtcagaactcttggttttgtctagactgtgccggcaaccaatcattattt 564 |||| |||||||||||||||||||||||||||| | |||| ||||| ||||||||||||| Sbjct: 521 ggggtggagagtcagaactcttggttttgtctaaattgtgtcggcagccaatcattattt 580 Query: 565 acattccggagcgtgagtaccgcggacggggcaacgggtttatcccaattgccgagtacg 624 | ||||| ||||||||||||| || || || || || ||||| || || || ||||| | Sbjct: 581 atattccagagcgtgagtaccatgggcgtggaaatggttttattcctatagcagagtatg 640 Query: 625 ggttggagtttaccaaagactcaaaagaggggaagaaacgggtgccggtgaggctattat 684 | |||| || |||| ||||||||| || |||||||| |||||| || || || |||| Sbjct: 641 gactggaattctccaaggactcaaaacagtggaagaaaaaggtgccagtaagactgttat 700 Query: 685 acagcgggaagaaccactatgatctgct 712 |||| |||| ||| || |||||| |||| Sbjct: 701 acagtgggaggaatcattatgatttgct 728 Score = 75.8 bits (38), Expect = 2e-10 Identities = 77/90 (85%) Strand = Plus / Plus Query: 69 atggcgccaccggtgcggccatccaatgccacgcttctcgctcggctcggggagggcacg 128 ||||||| | |||||||||| | ||||||||| |||||||| |||||| | || ||| | Sbjct: 61 atggcgcaagcggtgcggccgtgcaatgccacccttctcgcgcggctccgtgacggcgag 120 Query: 129 gccaggttcgagctcctcgaggaccccgcg 158 || ||||||||||||||||||||| ||||| Sbjct: 121 gcgaggttcgagctcctcgaggactccgcg 150
>dbj|AK068775.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013160P06, full insert sequence Length = 956 Score = 373 bits (188), Expect = e-100 Identities = 428/508 (84%) Strand = Plus / Plus Query: 205 cctcgctgaggggcggctggtcggcggcgctgaacaaggtggagcactacggggtccaga 264 |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 230 cctccctgaggggcgggtggtcgggggcgctgaacaaggtggagcactacggggtccaga 289 Query: 265 gagtcaccggcgatggacggtgcatgtttcgagccttggctaagggaatggcaaagacca 324 | ||||| || ||||| |||||||||||||| || |||| || ||||||||||||| || Sbjct: 290 gggtcacgggtgatggccggtgcatgtttcgggcgttggtgaaaggaatggcaaagaaca 349 Query: 325 ggggaattccattgaccccaagggaggaggtacaagatgcagacgacttacggctggcag 384 ||| |||||||||||| ||||||||||||||||||||||||| || |||||| |||||| Sbjct: 350 aggggattccattgacctcaagggaggaggtacaagatgcagatgatttacggatggcag 409 Query: 385 tgaaagaagttatatgtgacaaccaaaccgagcgtcaaaagtatgaagaggcaattatag 444 | ||||||||||| || || | | || || || ||||| |||||||||||| |||||| Sbjct: 410 taaaagaagttatctgcgatgatgagactgaacgacaaaaatatgaagaggcagttatag 469 Query: 445 ccattacagtggatgaatctttgaaacgatactgccaaaggataaggcgacctgattttt 504 | ||||| ||||||||||| |||| || |||||||| || ||||||||| ||||||| | Sbjct: 470 caattactgtggatgaatcattgaggcgctactgccatagaataaggcgatctgatttct 529 Query: 505 ggggcggagagtcagaactcttggttttgtctagactgtgccggcaaccaatcattattt 564 |||| |||||||||||||||||||||||||||| | |||| ||||| ||||||||||||| Sbjct: 530 ggggtggagagtcagaactcttggttttgtctaaattgtgtcggcagccaatcattattt 589 Query: 565 acattccggagcgtgagtaccgcggacggggcaacgggtttatcccaattgccgagtacg 624 | ||||| ||||||||||||| || || || || || ||||| || || || ||||| | Sbjct: 590 atattccagagcgtgagtaccatgggcgtggaaatggttttattcctatagcagagtatg 649 Query: 625 ggttggagtttaccaaagactcaaaagaggggaagaaacgggtgccggtgaggctattat 684 | |||| || |||| ||||||||| || |||||||| |||||| || || || |||| Sbjct: 650 gactggaattctccaaggactcaaaacagtggaagaaaaaggtgccagtaagactgttat 709 Query: 685 acagcgggaagaaccactatgatctgct 712 |||| |||| ||| || |||||| |||| Sbjct: 710 acagtgggaggaatcattatgatttgct 737 Score = 75.8 bits (38), Expect = 2e-10 Identities = 77/90 (85%) Strand = Plus / Plus Query: 69 atggcgccaccggtgcggccatccaatgccacgcttctcgctcggctcggggagggcacg 128 ||||||| | |||||||||| | ||||||||| |||||||| |||||| | || ||| | Sbjct: 70 atggcgcaagcggtgcggccgtgcaatgccacccttctcgcgcggctccgtgacggcgag 129 Query: 129 gccaggttcgagctcctcgaggaccccgcg 158 || ||||||||||||||||||||| ||||| Sbjct: 130 gcgaggttcgagctcctcgaggactccgcg 159
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 119 bits (60), Expect = 2e-23 Identities = 78/84 (92%) Strand = Plus / Plus Query: 212 gaggggcggctggtcggcggcgctgaacaaggtggagcactacggggtccagagagtcac 271 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 8761268 gaggggcgggtggtcgggggcgctgaacaaggtggagcactacggggtccagagggtcac 8761327 Query: 272 cggcgatggacggtgcatgtttcg 295 || ||||| |||||||||||||| Sbjct: 8761328 gggtgatggccggtgcatgtttcg 8761351 Score = 83.8 bits (42), Expect = 1e-12 Identities = 54/58 (93%) Strand = Plus / Plus Query: 309 ggaatggcaaagaccaggggaattccattgaccccaagggaggaggtacaagatgcag 366 ||||||||||||| || ||| |||||||||||| |||||||||||||||||||||||| Sbjct: 8761442 ggaatggcaaagaacaaggggattccattgacctcaagggaggaggtacaagatgcag 8761499 Score = 71.9 bits (36), Expect = 4e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 474 tactgccaaaggataaggcgacctgatttttggggcggagagtcagaactcttggt 529 |||||||| || ||||||||| ||||||| ||||| |||||||||||||||||||| Sbjct: 8763019 tactgccatagaataaggcgatctgatttctggggtggagagtcagaactcttggt 8763074 Score = 61.9 bits (31), Expect = 4e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 527 ggttttgtctagactgtgccggcaaccaatcattatttacattccggagcgtgag 581 ||||||||||| | |||| ||||| |||||||||||||| ||||| ||||||||| Sbjct: 8764376 ggttttgtctaaattgtgtcggcagccaatcattatttatattccagagcgtgag 8764430 Score = 58.0 bits (29), Expect = 6e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 420 caaaagtatgaagaggcaattatagccattacagtggatgaatctttga 468 ||||| |||||||||||| ||||||| ||||| ||||||||||| |||| Sbjct: 8762890 caaaaatatgaagaggcagttatagcaattactgtggatgaatcattga 8762938 Score = 54.0 bits (27), Expect = 9e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 96 gccacgcttctcgctcggctcggggagggcacggccaggttcgagctcctcgaggacccc 155 ||||| |||||||| |||||| | || ||| ||| ||||||||||||||||||||| || Sbjct: 8761042 gccacccttctcgcgcggctccgtgacggcgaggcgaggttcgagctcctcgaggactcc 8761101 Query: 156 gcg 158 ||| Sbjct: 8761102 gcg 8761104
>gb|AC135208.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1364E02, complete sequence Length = 112265 Score = 119 bits (60), Expect = 2e-23 Identities = 78/84 (92%) Strand = Plus / Plus Query: 212 gaggggcggctggtcggcggcgctgaacaaggtggagcactacggggtccagagagtcac 271 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 6586 gaggggcgggtggtcgggggcgctgaacaaggtggagcactacggggtccagagggtcac 6645 Query: 272 cggcgatggacggtgcatgtttcg 295 || ||||| |||||||||||||| Sbjct: 6646 gggtgatggccggtgcatgtttcg 6669 Score = 83.8 bits (42), Expect = 1e-12 Identities = 54/58 (93%) Strand = Plus / Plus Query: 309 ggaatggcaaagaccaggggaattccattgaccccaagggaggaggtacaagatgcag 366 ||||||||||||| || ||| |||||||||||| |||||||||||||||||||||||| Sbjct: 6760 ggaatggcaaagaacaaggggattccattgacctcaagggaggaggtacaagatgcag 6817 Score = 71.9 bits (36), Expect = 4e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 474 tactgccaaaggataaggcgacctgatttttggggcggagagtcagaactcttggt 529 |||||||| || ||||||||| ||||||| ||||| |||||||||||||||||||| Sbjct: 8337 tactgccatagaataaggcgatctgatttctggggtggagagtcagaactcttggt 8392 Score = 61.9 bits (31), Expect = 4e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 527 ggttttgtctagactgtgccggcaaccaatcattatttacattccggagcgtgag 581 ||||||||||| | |||| ||||| |||||||||||||| ||||| ||||||||| Sbjct: 9694 ggttttgtctaaattgtgtcggcagccaatcattatttatattccagagcgtgag 9748 Score = 58.0 bits (29), Expect = 6e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 420 caaaagtatgaagaggcaattatagccattacagtggatgaatctttga 468 ||||| |||||||||||| ||||||| ||||| ||||||||||| |||| Sbjct: 8208 caaaaatatgaagaggcagttatagcaattactgtggatgaatcattga 8256 Score = 54.0 bits (27), Expect = 9e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 96 gccacgcttctcgctcggctcggggagggcacggccaggttcgagctcctcgaggacccc 155 ||||| |||||||| |||||| | || ||| ||| ||||||||||||||||||||| || Sbjct: 6360 gccacccttctcgcgcggctccgtgacggcgaggcgaggttcgagctcctcgaggactcc 6419 Query: 156 gcg 158 ||| Sbjct: 6420 gcg 6422
>gb|AC135205.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1012B02, complete sequence Length = 115270 Score = 119 bits (60), Expect = 2e-23 Identities = 78/84 (92%) Strand = Plus / Plus Query: 212 gaggggcggctggtcggcggcgctgaacaaggtggagcactacggggtccagagagtcac 271 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 107084 gaggggcgggtggtcgggggcgctgaacaaggtggagcactacggggtccagagggtcac 107143 Query: 272 cggcgatggacggtgcatgtttcg 295 || ||||| |||||||||||||| Sbjct: 107144 gggtgatggccggtgcatgtttcg 107167 Score = 83.8 bits (42), Expect = 1e-12 Identities = 54/58 (93%) Strand = Plus / Plus Query: 309 ggaatggcaaagaccaggggaattccattgaccccaagggaggaggtacaagatgcag 366 ||||||||||||| || ||| |||||||||||| |||||||||||||||||||||||| Sbjct: 107258 ggaatggcaaagaacaaggggattccattgacctcaagggaggaggtacaagatgcag 107315 Score = 71.9 bits (36), Expect = 4e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 474 tactgccaaaggataaggcgacctgatttttggggcggagagtcagaactcttggt 529 |||||||| || ||||||||| ||||||| ||||| |||||||||||||||||||| Sbjct: 108835 tactgccatagaataaggcgatctgatttctggggtggagagtcagaactcttggt 108890 Score = 61.9 bits (31), Expect = 4e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 527 ggttttgtctagactgtgccggcaaccaatcattatttacattccggagcgtgag 581 ||||||||||| | |||| ||||| |||||||||||||| ||||| ||||||||| Sbjct: 110192 ggttttgtctaaattgtgtcggcagccaatcattatttatattccagagcgtgag 110246 Score = 58.0 bits (29), Expect = 6e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 420 caaaagtatgaagaggcaattatagccattacagtggatgaatctttga 468 ||||| |||||||||||| ||||||| ||||| ||||||||||| |||| Sbjct: 108706 caaaaatatgaagaggcagttatagcaattactgtggatgaatcattga 108754 Score = 54.0 bits (27), Expect = 9e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 96 gccacgcttctcgctcggctcggggagggcacggccaggttcgagctcctcgaggacccc 155 ||||| |||||||| |||||| | || ||| ||| ||||||||||||||||||||| || Sbjct: 106858 gccacccttctcgcgcggctccgtgacggcgaggcgaggttcgagctcctcgaggactcc 106917 Query: 156 gcg 158 ||| Sbjct: 106918 gcg 106920
>ref|XM_659149.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN6637.2), mRNA Length = 3258 Score = 46.1 bits (23), Expect = 0.21 Identities = 23/23 (100%) Strand = Plus / Plus Query: 52 cttccagattgctgccaatggcg 74 ||||||||||||||||||||||| Sbjct: 1560 cttccagattgctgccaatggcg 1582
>ref|XM_750842.1| Aspergillus fumigatus Af293 hypothetical protein (Afu2g16000) partial mRNA Length = 2112 Score = 46.1 bits (23), Expect = 0.21 Identities = 23/23 (100%) Strand = Plus / Plus Query: 125 cacggccaggttcgagctcctcg 147 ||||||||||||||||||||||| Sbjct: 635 cacggccaggttcgagctcctcg 657
>ref|NM_118794.3| Arabidopsis thaliana unknown protein (AT4G26600) mRNA, complete cds Length = 2429 Score = 44.1 bits (22), Expect = 0.84 Identities = 22/22 (100%) Strand = Plus / Plus Query: 349 aggaggtacaagatgcagacga 370 |||||||||||||||||||||| Sbjct: 523 aggaggtacaagatgcagacga 544
>gb|AY133836.1| Arabidopsis thaliana clone U19722 unknown protein (At4g26600) mRNA, complete cds Length = 2047 Score = 44.1 bits (22), Expect = 0.84 Identities = 22/22 (100%) Strand = Plus / Plus Query: 349 aggaggtacaagatgcagacga 370 |||||||||||||||||||||| Sbjct: 461 aggaggtacaagatgcagacga 482
>gb|AY070425.1| Arabidopsis thaliana unknown protein (At4g26600) mRNA, complete cds Length = 2457 Score = 44.1 bits (22), Expect = 0.84 Identities = 22/22 (100%) Strand = Plus / Plus Query: 349 aggaggtacaagatgcagacga 370 |||||||||||||||||||||| Sbjct: 523 aggaggtacaagatgcagacga 544
>emb|AL161565.2|ATCHRIV65 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 65 Length = 198320 Score = 44.1 bits (22), Expect = 0.84 Identities = 22/22 (100%) Strand = Plus / Plus Query: 349 aggaggtacaagatgcagacga 370 |||||||||||||||||||||| Sbjct: 117264 aggaggtacaagatgcagacga 117285
>emb|AL078465.1|ATT15N24 Arabidopsis thaliana DNA chromosome 4, BAC clone T15N24 (ESSA project) Length = 92657 Score = 44.1 bits (22), Expect = 0.84 Identities = 22/22 (100%) Strand = Plus / Plus Query: 349 aggaggtacaagatgcagacga 370 |||||||||||||||||||||| Sbjct: 49132 aggaggtacaagatgcagacga 49153
>emb|CU207366.1| Gramella forsetii KT0803 complete genome Length = 3798465 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 432 gaggcaattatagccattaca 452 ||||||||||||||||||||| Sbjct: 2170695 gaggcaattatagccattaca 2170715
>ref|XM_001209256.1| Aspergillus terreus NIH2624 conserved hypothetical protein (ATEG_09954) mRNA, complete cds Length = 4833 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 214 ggggcggctggtcggcggcgc 234 ||||||||||||||||||||| Sbjct: 1963 ggggcggctggtcggcggcgc 1943
>gb|AC093131.2| Papio anubis clone RP41-51G4, complete sequence Length = 181049 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 641 agactcaaaagaggggaagaa 661 ||||||||||||||||||||| Sbjct: 173088 agactcaaaagaggggaagaa 173108
>gb|AC108710.3| Homo sapiens 3p BAC RP11-88I7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 186799 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 438 attatagccattacagtggat 458 ||||||||||||||||||||| Sbjct: 45347 attatagccattacagtggat 45327
>gb|AF403715.1| Homo sapiens YWHAG protein gene, intron 1 Length = 28488 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 641 agactcaaaagaggggaagaa 661 ||||||||||||||||||||| Sbjct: 26580 agactcaaaagaggggaagaa 26560
>gb|AC024890.20| Homo sapiens 3 BAC RP11-389A20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 172117 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 438 attatagccattacagtggat 458 ||||||||||||||||||||| Sbjct: 42894 attatagccattacagtggat 42874
>gb|AC006388.3| Homo sapiens BAC clone CTA-363M4 from 7, complete sequence Length = 59241 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 641 agactcaaaagaggggaagaa 661 ||||||||||||||||||||| Sbjct: 19635 agactcaaaagaggggaagaa 19615
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 221 ctggtcggcggcgctgaacaaggtg 245 |||||||||| |||||||||||||| Sbjct: 5206529 ctggtcggcgccgctgaacaaggtg 5206553
>gb|AC019233.7|AC019233 Homo sapiens clone RP11-631O4, complete sequence Length = 263876 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 438 attatagccattacagtggat 458 ||||||||||||||||||||| Sbjct: 259226 attatagccattacagtggat 259206
>gb|AC093132.2| Papio anubis clone RP41-51M7, complete sequence Length = 167185 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 641 agactcaaaagaggggaagaa 661 ||||||||||||||||||||| Sbjct: 1401 agactcaaaagaggggaagaa 1421 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 136,090,276 Number of extensions: 6738748 Number of successful extensions: 121876 Number of sequences better than 10.0: 23 Number of HSP's gapped: 121876 Number of HSP's successfully gapped: 44 Length of query: 884 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 862 Effective length of database: 18,508,616,841 Effective search space: 15954427716942 Effective search space used: 15954427716942 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
