ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf27i05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK064741:Os07g0484500 28 1.8
2AK073751:Os04g0560300 27 5.2

>AK064741:Os07g0484500 |
          Length = 276
 Score = 28.1 bits (61), Expect = 1.8
 Identities = 12/44 (27%), Positives = 24/44 (54%)
 Frame = +2

Query: 26  PPEKWQSVVGRWYAEDSDLYKYTHLILTEQGEISLEQKNVTVNK 157
           PP+K +    RWY    +L   +  +   +G ++LE+ N+ +N+
Sbjct: 145 PPKKGRGPAPRWYISTEELDSLSSYM---RGRLTLEKVNIAINE 185



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>AK073751:Os04g0560300 |
          Length = 811

 Score = 26.6 bits (57), Expect = 5.2
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +2

Query: 11  PQAGPPPEKWQSVVGRWYAEDSDLYKYTHLILTEQGE 121
           PQ    P+  QSV  RW  +   L  Y+H+ +   G+
Sbjct: 554 PQGIEVPDPLQSVCTRWGTDSFSLGSYSHVAVGASGD 590


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 8,678,726
Number of extensions: 161820
Number of successful extensions: 401
Number of sequences better than 10.0: 2
Number of HSP's gapped: 401
Number of HSP's successfully gapped: 2
Length of query: 128
Length of database: 15,399,855
Length adjustment: 89
Effective length of query: 39
Effective length of database: 11,836,206
Effective search space: 461612034
Effective search space used: 461612034
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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