ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf27i05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q1RI96:HSPC1_RICBR Small heat shock protein C1 - Rickettsia bell... 32 0.66
2O67301:Y1262_AQUAE Uncharacterized lipoprotein aq_1262 precursor... 32 0.86
3Q92IQ7:HSPC1_RICCN Small heat shock protein C1 - Rickettsia conorii 32 0.86
4Q4UKR7:HSPC1_RICFE Small heat shock protein C1 - Rickettsia feli... 30 2.5
5O95007:OR6B1_HUMAN Olfactory receptor 6B1 - Homo sapiens (Human) 29 5.6
6Q73JF6:Y2619_TREDE Uncharacterized RNA methyltransferase TDE_261... 28 7.3
7Q7V3P8:MURC_PROMP UDP-N-acetylmuramate--L-alanine ligase - Proch... 28 7.3
8Q9ZDQ3:HSPC1_RICPR Small heat shock protein C1 - Rickettsia prow... 28 7.3
9Q2EEX7:FTSH_HELSJ Cell division protease ftsH homolog - Helicosp... 28 7.3
10Q5WCL2:TAGH_BACSK Teichoic acids export ATP-binding protein tagH... 28 9.5
11Q255E5:RPOC_CHLFF DNA-directed RNA polymerase beta' chain - Chla... 28 9.5
12P27427:ENV_DHVI1 Envelope glycoprotein precursor - Dhori virus (... 28 9.5

>Q1RI96:HSPC1_RICBR Small heat shock protein C1 - Rickettsia bellii (strain RML369-C)|
          Length = 167
 Score = 32.0 bits (71), Expect = 0.66
 Identities = 18/76 (23%), Positives = 34/76 (44%)
 Frame = +2

Query: 65  AEDSDLYKYTHLILTEQGEISLEQKNVTVNKSFSGYVSQWNEDSFESTFLWCFRKRFIFE 244
           A  +  Y   H     Q    L+ +   ++  F   +  +  +S +S F+   ++  I  
Sbjct: 22  ANQNQAYNSNHTTSLHQAIELLDNQITNIDNLFKNKLPFYESNSIKSKFITKDKQYIIIM 81

Query: 245 EMPRKDETKMKMKVNG 292
           E+P  D+  +K+KVNG
Sbjct: 82  EVPGFDKDHIKIKVNG 97



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>O67301:Y1262_AQUAE Uncharacterized lipoprotein aq_1262 precursor - Aquifex aeolicus|
          Length = 564

 Score = 31.6 bits (70), Expect = 0.86
 Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = -1

Query: 253 WHFFKDKSFPKA-PQKSRLKRIFIPLRNVARKRFVHSDVLLFKANLSLL 110
           W  FK K FP   P   R+   FI L    RK+    D+ L+K NL++L
Sbjct: 184 WRVFKWKPFPGFFPTNGRIDSTFIRLPEKFRKKNGEFDLNLYKKNLAIL 232



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>Q92IQ7:HSPC1_RICCN Small heat shock protein C1 - Rickettsia conorii|
          Length = 167

 Score = 31.6 bits (70), Expect = 0.86
 Identities = 14/55 (25%), Positives = 32/55 (58%)
 Frame = +2

Query: 128 LEQKNVTVNKSFSGYVSQWNEDSFESTFLWCFRKRFIFEEMPRKDETKMKMKVNG 292
           ++ +   ++  F   +S +  +S +S F+   ++  I  E+P  D++++K+KVNG
Sbjct: 43  IDNQITNIDNLFKNRLSLYESNSIKSNFITKDKQYIIVMEVPGFDKSQIKVKVNG 97



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>Q4UKR7:HSPC1_RICFE Small heat shock protein C1 - Rickettsia felis (Rickettsia azadi)|
          Length = 167

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 13/55 (23%), Positives = 31/55 (56%)
 Frame = +2

Query: 128 LEQKNVTVNKSFSGYVSQWNEDSFESTFLWCFRKRFIFEEMPRKDETKMKMKVNG 292
           ++ +   ++  F   +  +  +S +S F+   ++  I  E+P  D++++K+KVNG
Sbjct: 43  IDNQITNIDNLFKNRLPLYESNSIKSNFITKDKQYIIIMEVPGFDKSQIKIKVNG 97



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>O95007:OR6B1_HUMAN Olfactory receptor 6B1 - Homo sapiens (Human)|
          Length = 311

 Score = 28.9 bits (63), Expect = 5.6
 Identities = 17/46 (36%), Positives = 25/46 (54%)
 Frame = -1

Query: 172 VARKRFVHSDVLLFKANLSLLGEN*MSIFVQIRVFSIPSTNNTLPF 35
           V + R +H  +  F ANLS L    +S+ V   +FS  S NN++ F
Sbjct: 49  VLQNRPLHKPMYFFLANLSFLETWYISVTVPKLLFSFWSVNNSISF 94



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>Q73JF6:Y2619_TREDE Uncharacterized RNA methyltransferase TDE_2619 - Treponema|
           denticola
          Length = 404

 Score = 28.5 bits (62), Expect = 7.3
 Identities = 17/56 (30%), Positives = 26/56 (46%)
 Frame = +2

Query: 44  SVVGRWYAEDSDLYKYTHLILTEQGEISLEQKNVTVNKSFSGYVSQWNEDSFESTF 211
           S VG +     D  K  HL+   +  ++  Q+N  +N S SG V +  E+ F   F
Sbjct: 254 SGVGTFSLFAYDQAKEIHLVEHNKHALAYAQENFLINSSSSGIVREKKENGFPKIF 309



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>Q7V3P8:MURC_PROMP UDP-N-acetylmuramate--L-alanine ligase - Prochlorococcus marinus|
           subsp. pastoris (strain CCMP 1378 / MED4)
          Length = 473

 Score = 28.5 bits (62), Expect = 7.3
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = -1

Query: 247 FFKDKSFPKAPQKSRLKRIFIPLRNVARKRFVHSDV 140
           F KDK+     +K RL  IF P R    K+F+H  V
Sbjct: 351 FIKDKNSSDREEKGRLIAIFQPHRFTRVKQFIHEFV 386



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>Q9ZDQ3:HSPC1_RICPR Small heat shock protein C1 - Rickettsia prowazekii|
          Length = 163

 Score = 28.5 bits (62), Expect = 7.3
 Identities = 15/70 (21%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
 Frame = +2

Query: 89  YTHLILTEQGEIS--LEQKNVTVNKSFSGYVSQWNEDSFESTFLWCFRKRFIFEEMPRKD 262
           Y ++ LT    ++  ++     ++  F+  ++ +   S +S F+   ++  I  E+P  D
Sbjct: 24  YDYISLTPLRHVADLIDSHITNIDHLFNNRLTFYESSSLKSKFITKDKQYIIVMEVPGFD 83

Query: 263 ETKMKMKVNG 292
           ++++K+K+NG
Sbjct: 84  KSQIKVKLNG 93



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>Q2EEX7:FTSH_HELSJ Cell division protease ftsH homolog - Helicosporidium sp. subsp.|
           Simulium jonesii (Green alga)
          Length = 1460

 Score = 28.5 bits (62), Expect = 7.3
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
 Frame = -1

Query: 277 FHFRLVFPWHFFK--DKSFPKAPQKSRLKRIFIP 182
           + F+  F W FF+   KSF    +K  LKR F P
Sbjct: 730 YFFKEPFEWQFFEASTKSFENFAEKENLKRFFDP 763



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>Q5WCL2:TAGH_BACSK Teichoic acids export ATP-binding protein tagH - Bacillus clausii|
           (strain KSM-K16)
          Length = 360

 Score = 28.1 bits (61), Expect = 9.5
 Identities = 19/54 (35%), Positives = 28/54 (51%)
 Frame = +2

Query: 104 LTEQGEISLEQKNVTVNKSFSGYVSQWNEDSFESTFLWCFRKRFIFEEMPRKDE 265
           +T  GE SL   NV +NK+ +GY     E+  +   +  F K+ I E MP  +E
Sbjct: 83  MTVNGETSLIAINVGLNKNLNGY-----ENIEQKCLMHGFSKKEIEELMPAIEE 131



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>Q255E5:RPOC_CHLFF DNA-directed RNA polymerase beta' chain - Chlamydophila felis|
           (strain Fe/C-56)
          Length = 1393

 Score = 28.1 bits (61), Expect = 9.5
 Identities = 12/57 (21%), Positives = 28/57 (49%)
 Frame = +2

Query: 29  PEKWQSVVGRWYAEDSDLYKYTHLILTEQGEISLEQKNVTVNKSFSGYVSQWNEDSF 199
           P +  +V+G   ++   +  Y   ++ + G+  L +K +  +  +   V +W +DSF
Sbjct: 123 PSRIGNVLGMTASDLERIIYYEEYVVIDPGKTDLNKKQLLNDAQYREVVEKWGKDSF 179



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>P27427:ENV_DHVI1 Envelope glycoprotein precursor - Dhori virus (strain|
           Indian/1313/61) (Dho)
          Length = 521

 Score = 28.1 bits (61), Expect = 9.5
 Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 13/29 (44%)
 Frame = +2

Query: 182 WNEDSF-------------ESTFLWCFRK 229
           W EDSF             ESTFLWCF++
Sbjct: 203 WTEDSFAYLYDPAGTEKKTESTFLWCFKE 231


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 55,106,188
Number of extensions: 1048400
Number of successful extensions: 3498
Number of sequences better than 10.0: 12
Number of HSP's gapped: 3497
Number of HSP's successfully gapped: 12
Length of query: 128
Length of database: 100,686,439
Length adjustment: 95
Effective length of query: 33
Effective length of database: 74,628,414
Effective search space: 2462737662
Effective search space used: 2462737662
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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