ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf24i07 |
|---|---|
| Clone Library Name | barley_pub |
>Q09550:YQU3_CAEEL Uncharacterized protein F26C11.3 precursor - Caenorhabditis elegans| Length = 1317 Score = 34.7 bits (78), Expect = 0.75 Identities = 19/50 (38%), Positives = 27/50 (54%) Frame = -2 Query: 359 STKLRMDPTTRVEKTKSSSLRPKLGREDMSPSTQAVTPTSSSMSTLNGNW 210 + K R + TT E K +S K+ SP++ TPTS+SM+T NW Sbjct: 815 TNKTRTETTTDAEGCKKTSSTSKISTTPTSPTSSKPTPTSTSMTT-TYNW 863
>P51003:PAPOA_HUMAN Poly(A) polymerase alpha - Homo sapiens (Human)| Length = 745 Score = 33.9 bits (76), Expect = 1.3 Identities = 29/101 (28%), Positives = 41/101 (40%), Gaps = 4/101 (3%) Frame = -2 Query: 518 MSPAPKPTAANVVPLDTRVAKREPRE*APGSNMWLGREETAAETPAVGASMYMSTKLRMD 339 +SP PKPT + VV TR+ PR + G+ G T TP VG S Sbjct: 604 ISPPPKPTVSRVVS-STRLVNPPPR--SSGNAATSGNAATKIPTPIVGVKRTSSPHKEES 660 Query: 338 P----TTRVEKTKSSSLRPKLGREDMSPSTQAVTPTSSSMS 228 P T E ++ ++ G + Q T TS++ S Sbjct: 661 PKKTKTEEDETSEDANCLALSGHDKTEAKEQLDTETSTTQS 701
>Q46909:YGCS_ECOLI Inner membrane metabolite transport protein ygcS - Escherichia coli| Length = 445 Score = 33.1 bits (74), Expect = 2.2 Identities = 31/102 (30%), Positives = 45/102 (44%), Gaps = 7/102 (6%) Frame = +1 Query: 262 VLGDMSSRPNFGLNELDFVFSTLVV------GSILNFVLMYMLAPT-AGVSAAVSSLPSH 420 VL + + F L + +TLVV GS L +L + + T + VS V LP+ Sbjct: 302 VLTHLLAHRKFLLGSFLLLAATLVVMACLPSGSSLTLLLFVLFSTTISAVSNLVGILPAE 361 Query: 421 MFEPGAYSLGSRFATLVSKXXXXXXXXXXXXLMGTAISNGLI 546 F SLG FAT +S+ +G A+S GL+ Sbjct: 362 SFPTDIRSLGVGFATAMSR-------------LGAAVSTGLL 390
>Q9DBB9:CPN2_MOUSE Carboxypeptidase N subunit 2 precursor - Mus musculus (Mouse)| Length = 547 Score = 32.3 bits (72), Expect = 3.7 Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 1/76 (1%) Frame = -2 Query: 893 SVLTLAAMTSPSAINLSLASGTEAAGLSDFCAPVSLASITKDIPPS-TLLMHLRAMTDTL 717 S+L LA +T P + G + G FC+ LA I DIPP T ++ + T+ Sbjct: 11 SLLLLARLTQPCPV------GCDCFGREVFCSDEQLADIPPDIPPHITDIVFVETAFTTV 64 Query: 716 KTGAGMTLPRRNSIPF 669 +T A P + F Sbjct: 65 RTRAFSGSPNLTKVVF 80
>Q8CGB6:TENC1_MOUSE Tensin-like C1 domain-containing phosphatase - Mus musculus (Mouse)| Length = 1400 Score = 32.3 bits (72), Expect = 3.7 Identities = 21/60 (35%), Positives = 27/60 (45%) Frame = +1 Query: 565 DPAFETPNKPPPTLLNAGTWALHMGVSSNLRYQSLNGIEFLLGNVMPAPVFKVSVIALRC 744 DP ETP P PT ++ L G + ++ Y + E L G P V K S AL C Sbjct: 1240 DPLEETPEAPVPTNMSTAADLLRQGAACSVLYLTSVETESLTG---PQAVAKASSAALSC 1296
>Q965H3:SOP2_CAEEL Polycomb protein sop-2 - Caenorhabditis elegans| Length = 735 Score = 31.2 bits (69), Expect = 8.3 Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 2/87 (2%) Frame = -2 Query: 539 PLEMAVPMSPAPKPTAANVVPLDTRVAKREPRE*APG-SNMWLGRE-ETAAETPAVGASM 366 P+ A P +PA A +DT +A P+E A SN+ E +T+ E A + Sbjct: 270 PMAPAAPAAPATPEAAPAAEVMDTSIATEMPQESAVDLSNVSAATEMDTSKEGEASRPTS 329 Query: 365 YMSTKLRMDPTTRVEKTKSSSLRPKLG 285 K+R TT +++ S L PK G Sbjct: 330 EKKKKIR---TTEMDRLMSMDLGPKDG 353
>P41809:HKR1_YEAST Hansenula MRAKII killer toxin-resistant protein 1 precursor -| Saccharomyces cerevisiae (Baker's yeast) Length = 1802 Score = 31.2 bits (69), Expect = 8.3 Identities = 18/52 (34%), Positives = 25/52 (48%) Frame = -2 Query: 389 TPAVGASMYMSTKLRMDPTTRVEKTKSSSLRPKLGREDMSPSTQAVTPTSSS 234 TP+ AS+ MS+ P V SS+ R + + SPS PTSS+ Sbjct: 806 TPSPSASVAMSSTSSSSPYDIVYSLSSSASRSSIATYEFSPSPSTSLPTSST 857
>Q63HR2:TENC1_HUMAN Tensin-like C1 domain-containing phosphatase - Homo sapiens (Human)| Length = 1409 Score = 31.2 bits (69), Expect = 8.3 Identities = 20/60 (33%), Positives = 27/60 (45%) Frame = +1 Query: 565 DPAFETPNKPPPTLLNAGTWALHMGVSSNLRYQSLNGIEFLLGNVMPAPVFKVSVIALRC 744 DP ETP P PT ++ L G + ++ Y + E L G P V + S AL C Sbjct: 1249 DPLEETPEAPVPTNMSTAADLLRQGAACSVLYLTSVETESLTG---PQAVARASSAALSC 1305
>P46425:GSTP2_MOUSE Glutathione S-transferase P 2 - Mus musculus (Mouse)| Length = 210 Score = 31.2 bits (69), Expect = 8.3 Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 5/77 (6%) Frame = +1 Query: 217 PFKVLMEELVGVTACVLGDMSSRPNFGLNELDFVFSTLVVGSILNFVLMYMLAPTAGVSA 396 PF+ L+ + G A ++GD S ++ L +L + L G + NF L + A A +SA Sbjct: 129 PFETLLSQNQGGKAFIVGDQISFADYNLLDLLLIHQVLAPGCLDNFPL--LSAYVARLSA 186 Query: 397 -----AVSSLPSHMFEP 432 A S P H+ P Sbjct: 187 RPKIKAFLSSPEHVNRP 203
>P19157:GSTP1_MOUSE Glutathione S-transferase P 1 - Mus musculus (Mouse)| Length = 210 Score = 31.2 bits (69), Expect = 8.3 Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 5/77 (6%) Frame = +1 Query: 217 PFKVLMEELVGVTACVLGDMSSRPNFGLNELDFVFSTLVVGSILNFVLMYMLAPTAGVSA 396 PF+ L+ + G A ++GD S ++ L +L + L G + NF L + A A +SA Sbjct: 129 PFETLLSQNQGGKAFIVGDQISFADYNLLDLLLIHQVLAPGCLDNFPL--LSAYVARLSA 186 Query: 397 -----AVSSLPSHMFEP 432 A S P H+ P Sbjct: 187 RPKIKAFLSSPEHVNRP 203
>Q60550:GSTP1_MESAU Glutathione S-transferase P - Mesocricetus auratus (Golden hamster)| Length = 210 Score = 31.2 bits (69), Expect = 8.3 Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 5/77 (6%) Frame = +1 Query: 217 PFKVLMEELVGVTACVLGDMSSRPNFGLNELDFVFSTLVVGSILNFVLMYMLAPTAGVSA 396 PF+ L+ + G A ++GD S ++ L +L + L G + NF L + A A +SA Sbjct: 129 PFETLLSQNQGGKAFIVGDQISFADYNLLDLLLIHQVLAPGCLDNFPL--LSAYVARLSA 186 Query: 397 -----AVSSLPSHMFEP 432 A S P H+ P Sbjct: 187 RPKIKAFLSSPDHVNRP 203 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 146,388,870 Number of extensions: 3010192 Number of successful extensions: 9545 Number of sequences better than 10.0: 11 Number of HSP's gapped: 9536 Number of HSP's successfully gapped: 11 Length of query: 379 Length of database: 100,686,439 Length adjustment: 115 Effective length of query: 264 Effective length of database: 69,142,514 Effective search space: 18253623696 Effective search space used: 18253623696 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
