ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf27g13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q6TEP1:F91A1_DANRE Protein FAM91A1 - Danio rerio (Zebrafish) (Br... 32 5.7
2O14018:SYSC_SCHPO Seryl-tRNA synthetase, cytoplasmic - Schizosac... 32 7.4
3Q9Y2T1:AXN2_HUMAN Axin-2 - Homo sapiens (Human) 32 7.4

>Q6TEP1:F91A1_DANRE Protein FAM91A1 - Danio rerio (Zebrafish) (Brachydanio rerio)|
          Length = 831
 Score = 32.3 bits (72), Expect = 5.7
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = +1

Query: 106 EGQEGASQEDEEVQLLLASASPSANGEKNKEICLCVLGHHGKEHCSK 246
           +G E +S EDE V L L    P  + E N+++C  ++ H   + CSK
Sbjct: 702 QGTEASSSEDEWVPLELCFGMPLFSSELNRKVCQRIVSH---KLCSK 745



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>O14018:SYSC_SCHPO Seryl-tRNA synthetase, cytoplasmic - Schizosaccharomyces pombe|
           (Fission yeast)
          Length = 450

 Score = 32.0 bits (71), Expect = 7.4
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
 Frame = +2

Query: 770 YIAMLAPVLLEFDMRIKKGEQEEDD---LQLIDGANEYGGLRTSEYPFTCRINGD 925
           YIA+ AP +L  D+  K  + E+ D    ++IDG  E   + TSE P +   +G+
Sbjct: 196 YIALQAPTMLNKDVMAKTAQLEQFDEELYKVIDGDEERYLIATSEQPISAYHSGE 250



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>Q9Y2T1:AXN2_HUMAN Axin-2 - Homo sapiens (Human)|
          Length = 843

 Score = 32.0 bits (71), Expect = 7.4
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = -2

Query: 1190 HHHFYNFSDLP*TSNASKYSPLQQSHVFLSYTTHQYCHERAESHVTHP 1047
            HHH+ +   +P T    +    Q+ H F    +  YC+ + +SH   P
Sbjct: 515  HHHYIHHHAVPKTKEEIEAEATQRVHCFCPGGSEYYCYSKCKSHSKAP 562


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 255,504,044
Number of extensions: 5363632
Number of successful extensions: 11996
Number of sequences better than 10.0: 3
Number of HSP's gapped: 11991
Number of HSP's successfully gapped: 3
Length of query: 525
Length of database: 100,686,439
Length adjustment: 118
Effective length of query: 407
Effective length of database: 68,319,629
Effective search space: 27806089003
Effective search space used: 27806089003
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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