ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf27g13 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001069252.1| Oryza sativa (japonica cultivar-group) Os09g0266100 (Os09g0266100) mRNA, complete cds Length = 1325 Score = 103 bits (52), Expect = 2e-18 Identities = 112/132 (84%) Strand = Plus / Plus Query: 638 gtacagatatatggatatatagcagtgcgggattttcatgattcattgcttaattatgtt 697 |||||||||||||| || ||||||||| | ||| || ||||||| |||||||||||||| Sbjct: 556 gtacagatatatgggtacatagcagtgagagatcatcttgattcaatgcttaattatgtt 615 Query: 698 gtcaaccgcagcagagatgatcccatcattgtggaacagggttctcttattgagatgact 757 || || || ||||| |||||||||||||| ||| | ||||||||| ||||| |||| | Sbjct: 616 gtgaatcgtagcagggatgatcccatcatcgtgaagcagggttcttgcattgaaatgatt 675 Query: 758 ggccctaagcga 769 |||||||||||| Sbjct: 676 ggccctaagcga 687 Score = 67.9 bits (34), Expect = 1e-07 Identities = 55/62 (88%) Strand = Plus / Plus Query: 800 gagtttgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagat 859 ||||||||||||||||| || |||||||| | |||||||||||||||| |||| || ||| Sbjct: 717 gagtttgacatgaggataaaaaaaggagatcgagaagaggatgatctagaactgattgat 776 Query: 860 gg 861 || Sbjct: 777 gg 778 Score = 50.1 bits (25), Expect = 0.025 Identities = 28/29 (96%) Strand = Plus / Plus Query: 1134 atacttggatgcatttgaagttcaaggta 1162 |||| |||||||||||||||||||||||| Sbjct: 1055 atacctggatgcatttgaagttcaaggta 1083 Score = 48.1 bits (24), Expect = 0.097 Identities = 27/28 (96%) Strand = Plus / Plus Query: 924 attgtggcgcggttgacatcactttagc 951 |||||||||| ||||||||||||||||| Sbjct: 844 attgtggcgcagttgacatcactttagc 871
>dbj|AK102054.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082C15, full insert sequence Length = 1326 Score = 103 bits (52), Expect = 2e-18 Identities = 112/132 (84%) Strand = Plus / Plus Query: 638 gtacagatatatggatatatagcagtgcgggattttcatgattcattgcttaattatgtt 697 |||||||||||||| || ||||||||| | ||| || ||||||| |||||||||||||| Sbjct: 557 gtacagatatatgggtacatagcagtgagagatcatcttgattcaatgcttaattatgtt 616 Query: 698 gtcaaccgcagcagagatgatcccatcattgtggaacagggttctcttattgagatgact 757 || || || ||||| |||||||||||||| ||| | ||||||||| ||||| |||| | Sbjct: 617 gtgaatcgtagcagggatgatcccatcatcgtgaagcagggttcttgcattgaaatgatt 676 Query: 758 ggccctaagcga 769 |||||||||||| Sbjct: 677 ggccctaagcga 688 Score = 67.9 bits (34), Expect = 1e-07 Identities = 55/62 (88%) Strand = Plus / Plus Query: 800 gagtttgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagat 859 ||||||||||||||||| || |||||||| | |||||||||||||||| |||| || ||| Sbjct: 718 gagtttgacatgaggataaaaaaaggagatcgagaagaggatgatctagaactgattgat 777 Query: 860 gg 861 || Sbjct: 778 gg 779 Score = 50.1 bits (25), Expect = 0.025 Identities = 28/29 (96%) Strand = Plus / Plus Query: 1134 atacttggatgcatttgaagttcaaggta 1162 |||| |||||||||||||||||||||||| Sbjct: 1056 atacctggatgcatttgaagttcaaggta 1084 Score = 48.1 bits (24), Expect = 0.097 Identities = 27/28 (96%) Strand = Plus / Plus Query: 924 attgtggcgcggttgacatcactttagc 951 |||||||||| ||||||||||||||||| Sbjct: 845 attgtggcgcagttgacatcactttagc 872
>ref|NM_001055228.1| Oryza sativa (japonica cultivar-group) Os03g0107500 (Os03g0107500) mRNA, complete cds Length = 2874 Score = 93.7 bits (47), Expect = 2e-15 Identities = 74/83 (89%) Strand = Plus / Plus Query: 684 tgcttaattatgttgtcaaccgcagcagagatgatcccatcattgtggaacagggttctc 743 |||||||||||||| |||| ||||||||||||||||||||| ||| | |||||||||| Sbjct: 2357 tgcttaattatgttttcaatcgcagcagagatgatcccatcgccgtgaaccagggttctc 2416 Query: 744 ttattgagatgactggccctaag 766 |||| || ||||||||||||||| Sbjct: 2417 ttatcgaaatgactggccctaag 2439 Score = 44.1 bits (22), Expect = 1.5 Identities = 43/50 (86%) Strand = Plus / Plus Query: 800 gagtttgacatgaggatcaagaaaggagagcaagaagaggatgatctaca 849 |||||||||||||| ||||| | || ||| ||||||| ||||||||||| Sbjct: 2473 gagtttgacatgagaatcaaaactggggagaaagaagaagatgatctaca 2522
>ref|NM_001066999.1| Oryza sativa (japonica cultivar-group) Os07g0646600 (Os07g0646600) mRNA, complete cds Length = 1776 Score = 85.7 bits (43), Expect = 4e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 647 tatggatatatagcagtgcgggattttcatgattcattgcttaattatgttgtcaaccgc 706 |||||||| ||||| ||||||||| || ||| | |||||||||||| |||||||| | Sbjct: 804 tatggatacatagctgtgcgggatgatctagatccgttgcttaattatattgtcaactgt 863 Query: 707 agcagagatgatcccatcattgtggaacagggttc 741 ||||| |||||||||||||||||||| |||||||| Sbjct: 864 agcagggatgatcccatcattgtggagcagggttc 898 Score = 50.1 bits (25), Expect = 0.025 Identities = 52/61 (85%) Strand = Plus / Plus Query: 805 tgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagatggtgc 864 ||||||||||||||||| ||| || |||||| | ||||| ||||| || || |||||||| Sbjct: 962 tgacatgaggatcaagacaggtgaacaagaaaaagatgacctacagctgattgatggtgc 1021 Query: 865 a 865 | Sbjct: 1022 a 1022
>ref|NM_001066996.1| Oryza sativa (japonica cultivar-group) Os07g0646300 (Os07g0646300) mRNA, complete cds Length = 1813 Score = 85.7 bits (43), Expect = 4e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 647 tatggatatatagcagtgcgggattttcatgattcattgcttaattatgttgtcaaccgc 706 |||||||| ||||| ||||||||| || ||| | |||||||||||| |||||||| | Sbjct: 777 tatggatacatagctgtgcgggatgatctggatccgttgcttaattatattgtcaactgt 836 Query: 707 agcagagatgatcccatcattgtggaacagggttc 741 ||||| |||||||||||||||||||| |||||||| Sbjct: 837 agcagggatgatcccatcattgtggagcagggttc 871 Score = 50.1 bits (25), Expect = 0.025 Identities = 52/61 (85%) Strand = Plus / Plus Query: 805 tgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagatggtgc 864 ||||||||||||||||| ||| || |||||| | ||||| ||||| || || |||||||| Sbjct: 935 tgacatgaggatcaagacaggtgaacaagaaaaagatgacctacagctgattgatggtgc 994 Query: 865 a 865 | Sbjct: 995 a 995
>dbj|AK069929.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036O09, full insert sequence Length = 1777 Score = 85.7 bits (43), Expect = 4e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 647 tatggatatatagcagtgcgggattttcatgattcattgcttaattatgttgtcaaccgc 706 |||||||| ||||| ||||||||| || ||| | |||||||||||| |||||||| | Sbjct: 805 tatggatacatagctgtgcgggatgatctagatccgttgcttaattatattgtcaactgt 864 Query: 707 agcagagatgatcccatcattgtggaacagggttc 741 ||||| |||||||||||||||||||| |||||||| Sbjct: 865 agcagggatgatcccatcattgtggagcagggttc 899 Score = 50.1 bits (25), Expect = 0.025 Identities = 52/61 (85%) Strand = Plus / Plus Query: 805 tgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagatggtgc 864 ||||||||||||||||| ||| || |||||| | ||||| ||||| || || |||||||| Sbjct: 963 tgacatgaggatcaagacaggtgaacaagaaaaagatgacctacagctgattgatggtgc 1022 Query: 865 a 865 | Sbjct: 1023 a 1023
>dbj|AK066044.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013048P13, full insert sequence Length = 1814 Score = 85.7 bits (43), Expect = 4e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 647 tatggatatatagcagtgcgggattttcatgattcattgcttaattatgttgtcaaccgc 706 |||||||| ||||| ||||||||| || ||| | |||||||||||| |||||||| | Sbjct: 778 tatggatacatagctgtgcgggatgatctggatccgttgcttaattatattgtcaactgt 837 Query: 707 agcagagatgatcccatcattgtggaacagggttc 741 ||||| |||||||||||||||||||| |||||||| Sbjct: 838 agcagggatgatcccatcattgtggagcagggttc 872 Score = 50.1 bits (25), Expect = 0.025 Identities = 52/61 (85%) Strand = Plus / Plus Query: 805 tgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagatggtgc 864 ||||||||||||||||| ||| || |||||| | ||||| ||||| || || |||||||| Sbjct: 936 tgacatgaggatcaagacaggtgaacaagaaaaagatgacctacagctgattgatggtgc 995 Query: 865 a 865 | Sbjct: 996 a 996
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 81.8 bits (41), Expect = 7e-12 Identities = 77/89 (86%) Strand = Plus / Minus Query: 638 gtacagatatatggatatatagcagtgcgggattttcatgattcattgcttaattatgtt 697 |||||||||||||| || ||||||||| | ||| || ||||||| |||||||||||||| Sbjct: 4941052 gtacagatatatgggtacatagcagtgagagatcatcttgattcaatgcttaattatgtt 4940993 Query: 698 gtcaaccgcagcagagatgatcccatcat 726 || || || ||||| |||||||||||||| Sbjct: 4940992 gtgaatcgtagcagggatgatcccatcat 4940964 Score = 67.9 bits (34), Expect = 1e-07 Identities = 55/62 (88%) Strand = Plus / Minus Query: 800 gagtttgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagat 859 ||||||||||||||||| || |||||||| | |||||||||||||||| |||| || ||| Sbjct: 4938881 gagtttgacatgaggataaaaaaaggagatcgagaagaggatgatctagaactgattgat 4938822 Query: 860 gg 861 || Sbjct: 4938821 gg 4938820 Score = 61.9 bits (31), Expect = 6e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 914 attaatggagattgtggcgcggttgacatcactttagcccttgttcgttgggcatttgag 973 |||||||| |||||||| || ||||| ||||||||||| | |||| ||||| | ||| Sbjct: 3446877 attaatggtgattgtggtgcagttgatatcactttagcacgtgtttactgggccgtagag 3446818 Query: 974 gccacaatagatgttatcatatcaaaagtgcagtgtggattcgatttatctctcagttc 1032 ||||| ||| | |||||||||||| | ||||| |||| ||| |||||| ||||||||| Sbjct: 3446817 gccaccatacaagttatcatatcagatgtgcaaagtggtttcaatttatatctcagttc 3446759 Score = 61.9 bits (31), Expect = 6e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 800 gagtttgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagat 859 ||||||||||||||||| || ||||||||||||||| | ||||| ||||| |||| ||| Sbjct: 3446991 gagtttgacatgaggataaaaaaaggagagcaagaaaaagatgacctacagttaattgat 3446932 Query: 860 ggtgcaa 866 || |||| Sbjct: 3446931 ggagcaa 3446925 Score = 61.9 bits (31), Expect = 6e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 645 tatatggatatatagcagtgcgggattttcatgattcattgcttaattatgttgtcaacc 704 |||||||||| ||||||||||||||| | ||| |||||||||||||||||||||| Sbjct: 3448322 tatatggatacatagcagtgcgggatgatttggataaattgcttaattatgttgtcaact 3448263 Query: 705 gcagcagagatgatcccatcatt 727 ||||| ||| ||||||||||| Sbjct: 3448262 atagcagggataatcccatcatt 3448240 Score = 58.0 bits (29), Expect = 1e-04 Identities = 68/81 (83%) Strand = Plus / Minus Query: 1084 tattggtgggtcgtgtagcttaagaagacatgtgattgctgtaaaggagaatacttggat 1143 |||||||| ||| ||| ||||||||||| ||||| |||||||| | | |||||||| Sbjct: 3446707 tattggtgagtcatgtggcttaagaagatatgtggttgctgtatccttggacacttggat 3446648 Query: 1144 gcatttgaagttcaaggtagg 1164 |||||||||||| |||||||| Sbjct: 3446647 gcatttgaagttgaaggtagg 3446627 Score = 50.1 bits (25), Expect = 0.025 Identities = 28/29 (96%) Strand = Plus / Minus Query: 1134 atacttggatgcatttgaagttcaaggta 1162 |||| |||||||||||||||||||||||| Sbjct: 4938543 atacctggatgcatttgaagttcaaggta 4938515 Score = 48.1 bits (24), Expect = 0.097 Identities = 27/28 (96%) Strand = Plus / Minus Query: 924 attgtggcgcggttgacatcactttagc 951 |||||||||| ||||||||||||||||| Sbjct: 4938754 attgtggcgcagttgacatcactttagc 4938727
>dbj|AP005903.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1012G11 Length = 167168 Score = 81.8 bits (41), Expect = 7e-12 Identities = 77/89 (86%) Strand = Plus / Minus Query: 638 gtacagatatatggatatatagcagtgcgggattttcatgattcattgcttaattatgtt 697 |||||||||||||| || ||||||||| | ||| || ||||||| |||||||||||||| Sbjct: 123584 gtacagatatatgggtacatagcagtgagagatcatcttgattcaatgcttaattatgtt 123525 Query: 698 gtcaaccgcagcagagatgatcccatcat 726 || || || ||||| |||||||||||||| Sbjct: 123524 gtgaatcgtagcagggatgatcccatcat 123496 Score = 67.9 bits (34), Expect = 1e-07 Identities = 55/62 (88%) Strand = Plus / Minus Query: 800 gagtttgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagat 859 ||||||||||||||||| || |||||||| | |||||||||||||||| |||| || ||| Sbjct: 121413 gagtttgacatgaggataaaaaaaggagatcgagaagaggatgatctagaactgattgat 121354 Query: 860 gg 861 || Sbjct: 121353 gg 121352 Score = 50.1 bits (25), Expect = 0.025 Identities = 28/29 (96%) Strand = Plus / Minus Query: 1134 atacttggatgcatttgaagttcaaggta 1162 |||| |||||||||||||||||||||||| Sbjct: 121075 atacctggatgcatttgaagttcaaggta 121047 Score = 48.1 bits (24), Expect = 0.097 Identities = 27/28 (96%) Strand = Plus / Minus Query: 924 attgtggcgcggttgacatcactttagc 951 |||||||||| ||||||||||||||||| Sbjct: 121286 attgtggcgcagttgacatcactttagc 121259
>dbj|AK099488.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026J10, full insert sequence Length = 4054 Score = 81.8 bits (41), Expect = 7e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 638 gtacagatatatggatatatagcagtgcgggattttcatgattcattgcttaattatgtt 697 |||||||||||||| || ||||||||| | ||| || ||||||| |||||||||||||| Sbjct: 878 gtacagatatatgggtacatagcagtgagagatcatcttgattcaatgcttaattatgtt 937 Query: 698 gtcaaccgcagcagagatgatcccatcat 726 || || || ||||| |||||||||||||| Sbjct: 938 gtgaatcgtagcagggatgatcccatcat 966 Score = 67.9 bits (34), Expect = 1e-07 Identities = 55/62 (88%) Strand = Plus / Plus Query: 800 gagtttgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagat 859 ||||||||||||||||| || |||||||| | |||||||||||||||| |||| || ||| Sbjct: 3049 gagtttgacatgaggataaaaaaaggagatcgagaagaggatgatctagaactgattgat 3108 Query: 860 gg 861 || Sbjct: 3109 gg 3110 Score = 48.1 bits (24), Expect = 0.097 Identities = 27/28 (96%) Strand = Plus / Plus Query: 924 attgtggcgcggttgacatcactttagc 951 |||||||||| ||||||||||||||||| Sbjct: 3176 attgtggcgcagttgacatcactttagc 3203 Score = 42.1 bits (21), Expect = 6.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1134 atacttggatgcatttgaagttcaaggta 1162 |||| |||||||||||| ||||||||||| Sbjct: 3387 atacctggatgcatttgtagttcaaggta 3415
>ref|NM_001059495.1| Oryza sativa (japonica cultivar-group) Os04g0454600 (Os04g0454600) mRNA, complete cds Length = 1828 Score = 77.8 bits (39), Expect = 1e-10 Identities = 102/123 (82%) Strand = Plus / Plus Query: 647 tatggatatatagcagtgcgggattttcatgattcattgcttaattatgttgtcaaccgc 706 |||||||| || || |||||||| |||| ||| |||| ||||||||| | ||||| Sbjct: 1088 tatggatacattgctgtgcgggaccttcaggatccattacttaattatatagtcaaaatt 1147 Query: 707 agcagagatgatcccatcattgtggaacagggttctcttattgagatgactggccctaag 766 |||| |||||||||||||||||||| |||||||| || || || ||||||||||||||| Sbjct: 1148 ggcagggatgatcccatcattgtggagcagggttccctcatcgaaatgactggccctaag 1207 Query: 767 cga 769 ||| Sbjct: 1208 cga 1210 Score = 60.0 bits (30), Expect = 3e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 805 tgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagatggtgc 864 ||||||||| ||||||| |||||| | ||| || |||||||||||||| || |||||||| Sbjct: 1246 tgacatgagaatcaagacaggagaacgagaggaagatgatctacaactgattgatggtgc 1305 Query: 865 aa 866 || Sbjct: 1306 aa 1307
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 77.8 bits (39), Expect = 1e-10 Identities = 78/91 (85%) Strand = Plus / Minus Query: 647 tatggatatatagcagtgcgggattttcatgattcattgcttaattatgttgtcaaccgc 706 |||||||| ||||| ||||||||| || ||| | |||||||||||| |||||||| | Sbjct: 26928035 tatggatacatagctgtgcgggatgatctggatccgttgcttaattatattgtcaactgt 26927976 Query: 707 agcagagatgatcccatcattgtggaacagg 737 ||||| |||||||||||||||||||| |||| Sbjct: 26927975 agcagggatgatcccatcattgtggagcagg 26927945 Score = 77.8 bits (39), Expect = 1e-10 Identities = 78/91 (85%) Strand = Plus / Minus Query: 647 tatggatatatagcagtgcgggattttcatgattcattgcttaattatgttgtcaaccgc 706 |||||||| ||||| ||||||||| || ||| | |||||||||||| |||||||| | Sbjct: 26944679 tatggatacatagctgtgcgggatgatctagatccgttgcttaattatattgtcaactgt 26944620 Query: 707 agcagagatgatcccatcattgtggaacagg 737 ||||| |||||||||||||||||||| |||| Sbjct: 26944619 agcagggatgatcccatcattgtggagcagg 26944589 Score = 56.0 bits (28), Expect = 4e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 803 tttgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagatggt 862 |||||| |||||||||||| ||| || |||||| | ||||| ||||| ||||| |||||| Sbjct: 26889001 tttgacgtgaggatcaagacaggcgaacaagaaaaagatgacctacagctaattgatggt 26888942 Query: 863 gcaa 866 |||| Sbjct: 26888941 gcaa 26888938 Score = 54.0 bits (27), Expect = 0.002 Identities = 27/27 (100%) Strand = Plus / Minus Query: 1268 atctcagtgaaggtgacttggtcgaat 1294 ||||||||||||||||||||||||||| Sbjct: 27101523 atctcagtgaaggtgacttggtcgaat 27101497 Score = 50.1 bits (25), Expect = 0.025 Identities = 28/29 (96%) Strand = Plus / Plus Query: 29 cctccgctccaccgccgtcgccgcccgca 57 ||||||||||||||||| ||||||||||| Sbjct: 21789974 cctccgctccaccgccgccgccgcccgca 21790002 Score = 50.1 bits (25), Expect = 0.025 Identities = 25/25 (100%) Strand = Plus / Minus Query: 1268 atctcagtgaaggtgacttggtcga 1292 ||||||||||||||||||||||||| Sbjct: 26888551 atctcagtgaaggtgacttggtcga 26888527 Score = 50.1 bits (25), Expect = 0.025 Identities = 52/61 (85%) Strand = Plus / Minus Query: 805 tgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagatggtgc 864 ||||||||||||||||| ||| || |||||| | ||||| ||||| || || |||||||| Sbjct: 26925661 tgacatgaggatcaagacaggtgaacaagaaaaagatgacctacagctgattgatggtgc 26925602 Query: 865 a 865 | Sbjct: 26925601 a 26925601 Score = 50.1 bits (25), Expect = 0.025 Identities = 52/61 (85%) Strand = Plus / Minus Query: 805 tgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagatggtgc 864 ||||||||||||||||| ||| || |||||| | ||||| ||||| || || |||||||| Sbjct: 26942309 tgacatgaggatcaagacaggtgaacaagaaaaagatgacctacagctgattgatggtgc 26942250 Query: 865 a 865 | Sbjct: 26942249 a 26942249 Score = 48.1 bits (24), Expect = 0.097 Identities = 72/88 (81%) Strand = Plus / Minus Query: 650 ggatatatagcagtgcgggattttcatgattcattgcttaattatgttgtcaaccgcagc 709 ||||| ||||||||||||||| || ||| |||||||||||||| | |||| ||| Sbjct: 26895716 ggatacatagcagtgcgggatgatctggatccattgcttaattatatcatcaattttagc 26895657 Query: 710 agagatgatcccatcattgtggaacagg 737 || |||||||| ||||||||||| |||| Sbjct: 26895656 agggatgatcctatcattgtggagcagg 26895629 Score = 48.1 bits (24), Expect = 0.097 Identities = 72/88 (81%) Strand = Plus / Minus Query: 650 ggatatatagcagtgcgggattttcatgattcattgcttaattatgttgtcaaccgcagc 709 ||||| ||||||||||| | || || ||| |||||||||||||| | ||||| ||| Sbjct: 27102915 ggatacatagcagtgcgagtttatctggatccattgcttaattatatcgtcaattttagc 27102856 Query: 710 agagatgatcccatcattgtggaacagg 737 || |||||||||||| ||||||| |||| Sbjct: 27102855 agggatgatcccatcgttgtggagcagg 27102828
>dbj|AP003822.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1316_A04 Length = 87144 Score = 77.8 bits (39), Expect = 1e-10 Identities = 78/91 (85%) Strand = Plus / Minus Query: 647 tatggatatatagcagtgcgggattttcatgattcattgcttaattatgttgtcaaccgc 706 |||||||| ||||| ||||||||| || ||| | |||||||||||| |||||||| | Sbjct: 9157 tatggatacatagctgtgcgggatgatctagatccgttgcttaattatattgtcaactgt 9098 Query: 707 agcagagatgatcccatcattgtggaacagg 737 ||||| |||||||||||||||||||| |||| Sbjct: 9097 agcagggatgatcccatcattgtggagcagg 9067 Score = 50.1 bits (25), Expect = 0.025 Identities = 52/61 (85%) Strand = Plus / Minus Query: 805 tgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagatggtgc 864 ||||||||||||||||| ||| || |||||| | ||||| ||||| || || |||||||| Sbjct: 6787 tgacatgaggatcaagacaggtgaacaagaaaaagatgacctacagctgattgatggtgc 6728 Query: 865 a 865 | Sbjct: 6727 a 6727
>dbj|AP005455.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0503D09 Length = 144443 Score = 77.8 bits (39), Expect = 1e-10 Identities = 78/91 (85%) Strand = Plus / Minus Query: 647 tatggatatatagcagtgcgggattttcatgattcattgcttaattatgttgtcaaccgc 706 |||||||| ||||| ||||||||| || ||| | |||||||||||| |||||||| | Sbjct: 76626 tatggatacatagctgtgcgggatgatctggatccgttgcttaattatattgtcaactgt 76567 Query: 707 agcagagatgatcccatcattgtggaacagg 737 ||||| |||||||||||||||||||| |||| Sbjct: 76566 agcagggatgatcccatcattgtggagcagg 76536 Score = 77.8 bits (39), Expect = 1e-10 Identities = 78/91 (85%) Strand = Plus / Minus Query: 647 tatggatatatagcagtgcgggattttcatgattcattgcttaattatgttgtcaaccgc 706 |||||||| ||||| ||||||||| || ||| | |||||||||||| |||||||| | Sbjct: 93270 tatggatacatagctgtgcgggatgatctagatccgttgcttaattatattgtcaactgt 93211 Query: 707 agcagagatgatcccatcattgtggaacagg 737 ||||| |||||||||||||||||||| |||| Sbjct: 93210 agcagggatgatcccatcattgtggagcagg 93180 Score = 56.0 bits (28), Expect = 4e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 803 tttgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagatggt 862 |||||| |||||||||||| ||| || |||||| | ||||| ||||| ||||| |||||| Sbjct: 37592 tttgacgtgaggatcaagacaggcgaacaagaaaaagatgacctacagctaattgatggt 37533 Query: 863 gcaa 866 |||| Sbjct: 37532 gcaa 37529 Score = 50.1 bits (25), Expect = 0.025 Identities = 25/25 (100%) Strand = Plus / Minus Query: 1268 atctcagtgaaggtgacttggtcga 1292 ||||||||||||||||||||||||| Sbjct: 37142 atctcagtgaaggtgacttggtcga 37118 Score = 50.1 bits (25), Expect = 0.025 Identities = 52/61 (85%) Strand = Plus / Minus Query: 805 tgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagatggtgc 864 ||||||||||||||||| ||| || |||||| | ||||| ||||| || || |||||||| Sbjct: 74252 tgacatgaggatcaagacaggtgaacaagaaaaagatgacctacagctgattgatggtgc 74193 Query: 865 a 865 | Sbjct: 74192 a 74192 Score = 50.1 bits (25), Expect = 0.025 Identities = 52/61 (85%) Strand = Plus / Minus Query: 805 tgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagatggtgc 864 ||||||||||||||||| ||| || |||||| | ||||| ||||| || || |||||||| Sbjct: 90900 tgacatgaggatcaagacaggtgaacaagaaaaagatgacctacagctgattgatggtgc 90841 Query: 865 a 865 | Sbjct: 90840 a 90840 Score = 48.1 bits (24), Expect = 0.097 Identities = 72/88 (81%) Strand = Plus / Minus Query: 650 ggatatatagcagtgcgggattttcatgattcattgcttaattatgttgtcaaccgcagc 709 ||||| ||||||||||||||| || ||| |||||||||||||| | |||| ||| Sbjct: 44307 ggatacatagcagtgcgggatgatctggatccattgcttaattatatcatcaattttagc 44248 Query: 710 agagatgatcccatcattgtggaacagg 737 || |||||||| ||||||||||| |||| Sbjct: 44247 agggatgatcctatcattgtggagcagg 44220
>dbj|AK073427.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044A13, full insert sequence Length = 2846 Score = 77.8 bits (39), Expect = 1e-10 Identities = 102/123 (82%) Strand = Plus / Plus Query: 647 tatggatatatagcagtgcgggattttcatgattcattgcttaattatgttgtcaaccgc 706 |||||||| || || |||||||| |||| ||| |||| ||||||||| | ||||| Sbjct: 1024 tatggatacattgctgtgcgggaccttcaggatccattacttaattatatagtcaaaatt 1083 Query: 707 agcagagatgatcccatcattgtggaacagggttctcttattgagatgactggccctaag 766 |||| |||||||||||||||||||| |||||||| || || || ||||||||||||||| Sbjct: 1084 ggcagggatgatcccatcattgtggagcagggttccctcatcgaaatgactggccctaag 1143 Query: 767 cga 769 ||| Sbjct: 1144 cga 1146 Score = 60.0 bits (30), Expect = 3e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 805 tgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagatggtgc 864 ||||||||| ||||||| |||||| | ||| || |||||||||||||| || |||||||| Sbjct: 1182 tgacatgagaatcaagacaggagaacgagaggaagatgatctacaactgattgatggtgc 1241 Query: 865 aa 866 || Sbjct: 1242 aa 1243
>dbj|AK066187.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013058P10, full insert sequence Length = 1829 Score = 77.8 bits (39), Expect = 1e-10 Identities = 102/123 (82%) Strand = Plus / Plus Query: 647 tatggatatatagcagtgcgggattttcatgattcattgcttaattatgttgtcaaccgc 706 |||||||| || || |||||||| |||| ||| |||| ||||||||| | ||||| Sbjct: 1089 tatggatacattgctgtgcgggaccttcaggatccattacttaattatatagtcaaaatt 1148 Query: 707 agcagagatgatcccatcattgtggaacagggttctcttattgagatgactggccctaag 766 |||| |||||||||||||||||||| |||||||| || || || ||||||||||||||| Sbjct: 1149 ggcagggatgatcccatcattgtggagcagggttccctcatcgaaatgactggccctaag 1208 Query: 767 cga 769 ||| Sbjct: 1209 cga 1211 Score = 60.0 bits (30), Expect = 3e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 805 tgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagatggtgc 864 ||||||||| ||||||| |||||| | ||| || |||||||||||||| || |||||||| Sbjct: 1247 tgacatgagaatcaagacaggagaacgagaggaagatgatctacaactgattgatggtgc 1306 Query: 865 aa 866 || Sbjct: 1307 aa 1308
>dbj|AK101647.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033055P18, full insert sequence Length = 3322 Score = 69.9 bits (35), Expect = 3e-08 Identities = 101/123 (82%) Strand = Plus / Plus Query: 647 tatggatatatagcagtgcgggattttcatgattcattgcttaattatgttgtcaaccgc 706 |||||||| || || |||||||| |||| ||| |||| ||||||||| | ||||| Sbjct: 976 tatggatacattgctgtgcgggaccttcaggatccattacttaattatatagtcaaaatt 1035 Query: 707 agcagagatgatcccatcattgtggaacagggttctcttattgagatgactggccctaag 766 |||| |||||||||||||||||||| |||||||| || || || |||||||| |||||| Sbjct: 1036 ggcagggatgatcccatcattgtggagcagggttccctcatcgaaatgactggacctaag 1095 Query: 767 cga 769 ||| Sbjct: 1096 cga 1098 Score = 60.0 bits (30), Expect = 3e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 805 tgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagatggtgc 864 ||||||||| ||||||| |||||| | ||| || |||||||||||||| || |||||||| Sbjct: 1134 tgacatgagaatcaagacaggagaacgagaggaagatgatctacaactgattgatggtgc 1193 Query: 865 aa 866 || Sbjct: 1194 aa 1195
>ref|NM_001069196.1| Oryza sativa (japonica cultivar-group) Os09g0246700 (Os09g0246700) mRNA, complete cds Length = 1433 Score = 65.9 bits (33), Expect = 4e-07 Identities = 102/125 (81%) Strand = Plus / Plus Query: 645 tatatggatatatagcagtgcgggattttcatgattcattgcttaattatgttgtcaacc 704 |||||||||| ||||||||||||||| | ||| |||||||||||||||||||||| Sbjct: 635 tatatggatacatagcagtgcgggatgatttggataaattgcttaattatgttgtcaact 694 Query: 705 gcagcagagatgatcccatcattgtggaacagggttctcttattgagatgactggcccta 764 ||||| ||| ||||||||||| || ||||| ||| ||||| ||||||||||| | Sbjct: 695 atagcagggataatcccatcattatgcggcagggagatctgattgaaatgactggcccca 754 Query: 765 agcga 769 ||||| Sbjct: 755 agcga 759 Score = 61.9 bits (31), Expect = 6e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 800 gagtttgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagat 859 ||||||||||||||||| || ||||||||||||||| | ||||| ||||| |||| ||| Sbjct: 790 gagtttgacatgaggataaaaaaaggagagcaagaaaaagatgacctacagttaattgat 849 Query: 860 ggtgcaa 866 || |||| Sbjct: 850 ggagcaa 856 Score = 61.9 bits (31), Expect = 6e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 914 attaatggagattgtggcgcggttgacatcactttagcccttgttcgttgggcatttgag 973 |||||||| |||||||| || ||||| ||||||||||| | |||| ||||| | ||| Sbjct: 904 attaatggtgattgtggtgcagttgatatcactttagcacgtgtttactgggccgtagag 963 Query: 974 gccacaatagatgttatcatatcaaaagtgcagtgtggattcgatttatctctcagttc 1032 ||||| ||| | |||||||||||| | ||||| |||| ||| |||||| ||||||||| Sbjct: 964 gccaccatacaagttatcatatcagatgtgcaaagtggtttcaatttatatctcagttc 1022 Score = 58.0 bits (29), Expect = 1e-04 Identities = 68/81 (83%) Strand = Plus / Plus Query: 1084 tattggtgggtcgtgtagcttaagaagacatgtgattgctgtaaaggagaatacttggat 1143 |||||||| ||| ||| ||||||||||| ||||| |||||||| | | |||||||| Sbjct: 1074 tattggtgagtcatgtggcttaagaagatatgtggttgctgtatccttggacacttggat 1133 Query: 1144 gcatttgaagttcaaggtagg 1164 |||||||||||| |||||||| Sbjct: 1134 gcatttgaagttgaaggtagg 1154
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 65.9 bits (33), Expect = 4e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 684 tgcttaattatgttgtcaaccgcagcagagatgatcccatc 724 |||||||||||||| |||| ||||||||||||||||||||| Sbjct: 436817 tgcttaattatgttttcaatcgcagcagagatgatcccatc 436857 Score = 52.0 bits (26), Expect = 0.006 Identities = 32/34 (94%) Strand = Plus / Plus Query: 733 acagggttctcttattgagatgactggccctaag 766 ||||||||||||||| || ||||||||||||||| Sbjct: 437003 acagggttctcttatcgaaatgactggccctaag 437036 Score = 44.1 bits (22), Expect = 1.5 Identities = 43/50 (86%) Strand = Plus / Plus Query: 800 gagtttgacatgaggatcaagaaaggagagcaagaagaggatgatctaca 849 |||||||||||||| ||||| | || ||| ||||||| ||||||||||| Sbjct: 437070 gagtttgacatgagaatcaaaactggggagaaagaagaagatgatctaca 437119
>dbj|AK121936.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107C02, full insert sequence Length = 1436 Score = 65.9 bits (33), Expect = 4e-07 Identities = 102/125 (81%) Strand = Plus / Plus Query: 645 tatatggatatatagcagtgcgggattttcatgattcattgcttaattatgttgtcaacc 704 |||||||||| ||||||||||||||| | ||| |||||||||||||||||||||| Sbjct: 636 tatatggatacatagcagtgcgggatgatttggataaattgcttaattatgttgtcaact 695 Query: 705 gcagcagagatgatcccatcattgtggaacagggttctcttattgagatgactggcccta 764 ||||| ||| ||||||||||| || ||||| ||| ||||| ||||||||||| | Sbjct: 696 atagcagggataatcccatcattatgcggcagggagatctgattgaaatgactggcccca 755 Query: 765 agcga 769 ||||| Sbjct: 756 agcga 760 Score = 61.9 bits (31), Expect = 6e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 914 attaatggagattgtggcgcggttgacatcactttagcccttgttcgttgggcatttgag 973 |||||||| |||||||| || ||||| ||||||||||| | |||| ||||| | ||| Sbjct: 905 attaatggtgattgtggtgcagttgatatcactttagcacgtgtttactgggccgtagag 964 Query: 974 gccacaatagatgttatcatatcaaaagtgcagtgtggattcgatttatctctcagttc 1032 ||||| ||| | |||||||||||| | ||||| |||| ||| |||||| ||||||||| Sbjct: 965 gccaccatacaagttatcatatcagatgtgcaaagtggtttcaatttatatctcagttc 1023 Score = 58.0 bits (29), Expect = 1e-04 Identities = 68/81 (83%) Strand = Plus / Plus Query: 1084 tattggtgggtcgtgtagcttaagaagacatgtgattgctgtaaaggagaatacttggat 1143 |||||||| ||| ||| ||||||||||| ||||| |||||||| | | |||||||| Sbjct: 1075 tattggtgagtcatgtggcttaagaagatatgtggttgctgtatccttggacacttggat 1134 Query: 1144 gcatttgaagttcaaggtagg 1164 |||||||||||| |||||||| Sbjct: 1135 gcatttgaagttgaaggtagg 1155 Score = 54.0 bits (27), Expect = 0.002 Identities = 57/67 (85%) Strand = Plus / Plus Query: 800 gagtttgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagat 859 ||||||||||||||||| || ||||||||| ||||| | ||||| ||||| |||| ||| Sbjct: 791 gagtttgacatgaggataaaaaaaggagagtaagaaaaagatgacctacagttaattgat 850 Query: 860 ggtgcaa 866 || |||| Sbjct: 851 ggagcaa 857
>gb|AC113930.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1384D03, complete sequence Length = 116214 Score = 65.9 bits (33), Expect = 4e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 684 tgcttaattatgttgtcaaccgcagcagagatgatcccatc 724 |||||||||||||| |||| ||||||||||||||||||||| Sbjct: 35279 tgcttaattatgttttcaatcgcagcagagatgatcccatc 35319 Score = 52.0 bits (26), Expect = 0.006 Identities = 32/34 (94%) Strand = Plus / Plus Query: 733 acagggttctcttattgagatgactggccctaag 766 ||||||||||||||| || ||||||||||||||| Sbjct: 35465 acagggttctcttatcgaaatgactggccctaag 35498 Score = 44.1 bits (22), Expect = 1.5 Identities = 43/50 (86%) Strand = Plus / Plus Query: 800 gagtttgacatgaggatcaagaaaggagagcaagaagaggatgatctaca 849 |||||||||||||| ||||| | || ||| ||||||| ||||||||||| Sbjct: 35532 gagtttgacatgagaatcaaaactggggagaaagaagaagatgatctaca 35581
>ref|NM_001072968.1| Oryza sativa (japonica cultivar-group) Os12g0228300 (Os12g0228300) mRNA, complete cds Length = 3399 Score = 61.9 bits (31), Expect = 6e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 677 gattcattgcttaattatgttgtcaaccgcagcagagatgatcccat 723 |||||| ||||||||| |||| |||| |||||||||||||||||||| Sbjct: 667 gattcaatgcttaattttgttttcaatcgcagcagagatgatcccat 713 Score = 60.0 bits (30), Expect = 3e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 800 gagtttgacatgaggatcaagaaaggagagcaagaagaggatgatctaca 849 |||||||||||||| |||||||| || ||| ||||||| ||||||||||| Sbjct: 760 gagtttgacatgagaatcaagaatggggagaaagaagaagatgatctaca 809
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 61.9 bits (31), Expect = 6e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 677 gattcattgcttaattatgttgtcaaccgcagcagagatgatcccat 723 |||||| ||||||||| |||| |||| |||||||||||||||||||| Sbjct: 6972384 gattcaatgcttaattttgttttcaatcgcagcagagatgatcccat 6972430 Score = 60.0 bits (30), Expect = 3e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 800 gagtttgacatgaggatcaagaaaggagagcaagaagaggatgatctaca 849 |||||||||||||| |||||||| || ||| ||||||| ||||||||||| Sbjct: 6975053 gagtttgacatgagaatcaagaatggggagaaagaagaagatgatctaca 6975102 Score = 50.1 bits (25), Expect = 0.025 Identities = 31/33 (93%) Strand = Plus / Plus Query: 734 cagggttctcttattgagatgactggccctaag 766 ||||||||| ||||||| ||||||||||||||| Sbjct: 6974987 cagggttctattattgaaatgactggccctaag 6975019 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1142 atgcatttgaagttcaaggta 1162 ||||||||||||||||||||| Sbjct: 6975401 atgcatttgaagttcaaggta 6975421 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 29 cctccgctccaccgccgtcgccgcc 53 ||||||| ||||||||||||||||| Sbjct: 7214980 cctccgcgccaccgccgtcgccgcc 7215004
>dbj|AP005729.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0069P02 Length = 163033 Score = 61.9 bits (31), Expect = 6e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 914 attaatggagattgtggcgcggttgacatcactttagcccttgttcgttgggcatttgag 973 |||||||| |||||||| || ||||| ||||||||||| | |||| ||||| | ||| Sbjct: 162809 attaatggtgattgtggtgcagttgatatcactttagcacgtgtttactgggccgtagag 162750 Query: 974 gccacaatagatgttatcatatcaaaagtgcagtgtggattcgatttatctctcagttc 1032 ||||| ||| | |||||||||||| | ||||| |||| ||| |||||| ||||||||| Sbjct: 162749 gccaccatacaagttatcatatcagatgtgcaaagtggtttcaatttatatctcagttc 162691 Score = 61.9 bits (31), Expect = 6e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 800 gagtttgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagat 859 ||||||||||||||||| || ||||||||||||||| | ||||| ||||| |||| ||| Sbjct: 162923 gagtttgacatgaggataaaaaaaggagagcaagaaaaagatgacctacagttaattgat 162864 Query: 860 ggtgcaa 866 || |||| Sbjct: 162863 ggagcaa 162857 Score = 58.0 bits (29), Expect = 1e-04 Identities = 68/81 (83%) Strand = Plus / Minus Query: 1084 tattggtgggtcgtgtagcttaagaagacatgtgattgctgtaaaggagaatacttggat 1143 |||||||| ||| ||| ||||||||||| ||||| |||||||| | | |||||||| Sbjct: 162639 tattggtgagtcatgtggcttaagaagatatgtggttgctgtatccttggacacttggat 162580 Query: 1144 gcatttgaagttcaaggtagg 1164 |||||||||||| |||||||| Sbjct: 162579 gcatttgaagttgaaggtagg 162559
>dbj|AP005571.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1451_A02 Length = 135861 Score = 61.9 bits (31), Expect = 6e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 645 tatatggatatatagcagtgcgggattttcatgattcattgcttaattatgttgtcaacc 704 |||||||||| ||||||||||||||| | ||| |||||||||||||||||||||| Sbjct: 1210 tatatggatacatagcagtgcgggatgatttggataaattgcttaattatgttgtcaact 1151 Query: 705 gcagcagagatgatcccatcatt 727 ||||| ||| ||||||||||| Sbjct: 1150 atagcagggataatcccatcatt 1128
>dbj|AP005550.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1058_F03 Length = 150486 Score = 61.9 bits (31), Expect = 6e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 914 attaatggagattgtggcgcggttgacatcactttagcccttgttcgttgggcatttgag 973 |||||||| |||||||| || ||||| ||||||||||| | |||| ||||| | ||| Sbjct: 115358 attaatggtgattgtggtgcagttgatatcactttagcacgtgtttactgggccgtagag 115299 Query: 974 gccacaatagatgttatcatatcaaaagtgcagtgtggattcgatttatctctcagttc 1032 ||||| ||| | |||||||||||| | ||||| |||| ||| |||||| ||||||||| Sbjct: 115298 gccaccatacaagttatcatatcagatgtgcaaagtggtttcaatttatatctcagttc 115240 Score = 61.9 bits (31), Expect = 6e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 800 gagtttgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagat 859 ||||||||||||||||| || ||||||||||||||| | ||||| ||||| |||| ||| Sbjct: 115472 gagtttgacatgaggataaaaaaaggagagcaagaaaaagatgacctacagttaattgat 115413 Query: 860 ggtgcaa 866 || |||| Sbjct: 115412 ggagcaa 115406 Score = 61.9 bits (31), Expect = 6e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 645 tatatggatatatagcagtgcgggattttcatgattcattgcttaattatgttgtcaacc 704 |||||||||| ||||||||||||||| | ||| |||||||||||||||||||||| Sbjct: 116803 tatatggatacatagcagtgcgggatgatttggataaattgcttaattatgttgtcaact 116744 Query: 705 gcagcagagatgatcccatcatt 727 ||||| ||| ||||||||||| Sbjct: 116743 atagcagggataatcccatcatt 116721 Score = 58.0 bits (29), Expect = 1e-04 Identities = 68/81 (83%) Strand = Plus / Minus Query: 1084 tattggtgggtcgtgtagcttaagaagacatgtgattgctgtaaaggagaatacttggat 1143 |||||||| ||| ||| ||||||||||| ||||| |||||||| | | |||||||| Sbjct: 115188 tattggtgagtcatgtggcttaagaagatatgtggttgctgtatccttggacacttggat 115129 Query: 1144 gcatttgaagttcaaggtagg 1164 |||||||||||| |||||||| Sbjct: 115128 gcatttgaagttgaaggtagg 115108
>emb|AL732533.4|CNS08C98 Oryza sativa chromosome 12, . BAC OSJNBa0084K07 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 147611 Score = 61.9 bits (31), Expect = 6e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 677 gattcattgcttaattatgttgtcaaccgcagcagagatgatcccat 723 |||||| ||||||||| |||| |||| |||||||||||||||||||| Sbjct: 107829 gattcaatgcttaattttgttttcaatcgcagcagagatgatcccat 107783 Score = 60.0 bits (30), Expect = 3e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 800 gagtttgacatgaggatcaagaaaggagagcaagaagaggatgatctaca 849 |||||||||||||| |||||||| || ||| ||||||| ||||||||||| Sbjct: 105160 gagtttgacatgagaatcaagaatggggagaaagaagaagatgatctaca 105111 Score = 50.1 bits (25), Expect = 0.025 Identities = 31/33 (93%) Strand = Plus / Minus Query: 734 cagggttctcttattgagatgactggccctaag 766 ||||||||| ||||||| ||||||||||||||| Sbjct: 105226 cagggttctattattgaaatgactggccctaag 105194 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1142 atgcatttgaagttcaaggta 1162 ||||||||||||||||||||| Sbjct: 104812 atgcatttgaagttcaaggta 104792
>emb|CR855146.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0093K19, complete sequence Length = 90989 Score = 60.0 bits (30), Expect = 3e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 805 tgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagatggtgc 864 ||||||||| ||||||| |||||| | ||| || |||||||||||||| || |||||||| Sbjct: 86009 tgacatgagaatcaagacaggagaacgagaggaagatgatctacaactgattgatggtgc 85950 Query: 865 aa 866 || Sbjct: 85949 aa 85948 Score = 46.1 bits (23), Expect = 0.38 Identities = 74/91 (81%) Strand = Plus / Minus Query: 647 tatggatatatagcagtgcgggattttcatgattcattgcttaattatgttgtcaaccgc 706 |||||||| || || |||||||| |||| ||| |||| ||||||||| | ||||| Sbjct: 87718 tatggatacattgctgtgcgggaccttcaggatccattacttaattatatagtcaaaatt 87659 Query: 707 agcagagatgatcccatcattgtggaacagg 737 |||| |||||||||||||||||||| |||| Sbjct: 87658 ggcagggatgatcccatcattgtggagcagg 87628
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 60.0 bits (30), Expect = 3e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 805 tgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagatggtgc 864 ||||||||| ||||||| |||||| | ||| || |||||||||||||| || |||||||| Sbjct: 22736617 tgacatgagaatcaagacaggagaacgagaggaagatgatctacaactgattgatggtgc 22736558 Query: 865 aa 866 || Sbjct: 22736557 aa 22736556 Score = 60.0 bits (30), Expect = 3e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 805 tgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagatggtgc 864 ||||||||| ||||||| |||||| | ||| || |||||||||||||| || |||||||| Sbjct: 22761745 tgacatgagaatcaagacaggagaacgagaggaagatgatctacaactgattgatggtgc 22761686 Query: 865 aa 866 || Sbjct: 22761685 aa 22761684 Score = 54.0 bits (27), Expect = 0.002 Identities = 51/59 (86%) Strand = Plus / Minus Query: 805 tgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagatggtg 863 ||||||||||||||||| |||||| | ||| ||| |||||||||| || || ||||||| Sbjct: 22537886 tgacatgaggatcaagacaggagaacgagatgagaatgatctacagctgattgatggtg 22537828 Score = 46.1 bits (23), Expect = 0.38 Identities = 74/91 (81%) Strand = Plus / Minus Query: 647 tatggatatatagcagtgcgggattttcatgattcattgcttaattatgttgtcaaccgc 706 |||||||| || || |||||||| |||| ||| |||| ||||||||| | ||||| Sbjct: 22738324 tatggatacattgctgtgcgggaccttcaggatccattacttaattatatagtcaaaatt 22738265 Query: 707 agcagagatgatcccatcattgtggaacagg 737 |||| |||||||||||||||||||| |||| Sbjct: 22738264 ggcagggatgatcccatcattgtggagcagg 22738234 Score = 46.1 bits (23), Expect = 0.38 Identities = 74/91 (81%) Strand = Plus / Minus Query: 647 tatggatatatagcagtgcgggattttcatgattcattgcttaattatgttgtcaaccgc 706 |||||||| || || |||||||| |||| ||| |||| ||||||||| | ||||| Sbjct: 22763454 tatggatacattgctgtgcgggaccttcaggatccattacttaattatatagtcaaaatt 22763395 Query: 707 agcagagatgatcccatcattgtggaacagg 737 |||| |||||||||||||||||||| |||| Sbjct: 22763394 ggcagggatgatcccatcattgtggagcagg 22763364
>emb|AL731584.3|OSJN00224 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006M15, complete sequence Length = 143109 Score = 60.0 bits (30), Expect = 3e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 805 tgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagatggtgc 864 ||||||||| ||||||| |||||| | ||| || |||||||||||||| || |||||||| Sbjct: 73814 tgacatgagaatcaagacaggagaacgagaggaagatgatctacaactgattgatggtgc 73755 Query: 865 aa 866 || Sbjct: 73754 aa 73753 Score = 60.0 bits (30), Expect = 3e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 805 tgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagatggtgc 864 ||||||||| ||||||| |||||| | ||| || |||||||||||||| || |||||||| Sbjct: 98941 tgacatgagaatcaagacaggagaacgagaggaagatgatctacaactgattgatggtgc 98882 Query: 865 aa 866 || Sbjct: 98881 aa 98880 Score = 46.1 bits (23), Expect = 0.38 Identities = 74/91 (81%) Strand = Plus / Minus Query: 647 tatggatatatagcagtgcgggattttcatgattcattgcttaattatgttgtcaaccgc 706 |||||||| || || |||||||| |||| ||| |||| ||||||||| | ||||| Sbjct: 75521 tatggatacattgctgtgcgggaccttcaggatccattacttaattatatagtcaaaatt 75462 Query: 707 agcagagatgatcccatcattgtggaacagg 737 |||| |||||||||||||||||||| |||| Sbjct: 75461 ggcagggatgatcccatcattgtggagcagg 75431 Score = 46.1 bits (23), Expect = 0.38 Identities = 74/91 (81%) Strand = Plus / Minus Query: 647 tatggatatatagcagtgcgggattttcatgattcattgcttaattatgttgtcaaccgc 706 |||||||| || || |||||||| |||| ||| |||| ||||||||| | ||||| Sbjct: 100650 tatggatacattgctgtgcgggaccttcaggatccattacttaattatatagtcaaaatt 100591 Query: 707 agcagagatgatcccatcattgtggaacagg 737 |||| |||||||||||||||||||| |||| Sbjct: 100590 ggcagggatgatcccatcattgtggagcagg 100560
>emb|AL662937.4|OSJN00140 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027G07, complete sequence Length = 179021 Score = 60.0 bits (30), Expect = 3e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 805 tgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagatggtgc 864 ||||||||| ||||||| |||||| | ||| || |||||||||||||| || |||||||| Sbjct: 178717 tgacatgagaatcaagacaggagaacgagaggaagatgatctacaactgattgatggtgc 178658 Query: 865 aa 866 || Sbjct: 178657 aa 178656
>ref|NM_001066993.1| Oryza sativa (japonica cultivar-group) Os07g0645800 (Os07g0645800) mRNA, complete cds Length = 549 Score = 56.0 bits (28), Expect = 4e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 803 tttgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagatggt 862 |||||| |||||||||||| ||| || |||||| | ||||| ||||| ||||| |||||| Sbjct: 49 tttgacgtgaggatcaagacaggcgaacaagaaaaagatgacctacagctaattgatggt 108 Query: 863 gcaa 866 |||| Sbjct: 109 gcaa 112 Score = 50.1 bits (25), Expect = 0.025 Identities = 25/25 (100%) Strand = Plus / Plus Query: 1268 atctcagtgaaggtgacttggtcga 1292 ||||||||||||||||||||||||| Sbjct: 499 atctcagtgaaggtgacttggtcga 523
>ref|NM_001067016.1| Oryza sativa (japonica cultivar-group) Os07g0649600 (Os07g0649600) mRNA, complete cds Length = 534 Score = 54.0 bits (27), Expect = 0.002 Identities = 27/27 (100%) Strand = Plus / Plus Query: 1268 atctcagtgaaggtgacttggtcgaat 1294 ||||||||||||||||||||||||||| Sbjct: 499 atctcagtgaaggtgacttggtcgaat 525
>emb|AL606615.4|OSJN00048 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0086B14, complete sequence Length = 175698 Score = 54.0 bits (27), Expect = 0.002 Identities = 51/59 (86%) Strand = Plus / Minus Query: 805 tgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagatggtg 863 ||||||||||||||||| |||||| | ||| ||| |||||||||| || || ||||||| Sbjct: 141641 tgacatgaggatcaagacaggagaacgagatgagaatgatctacagctgattgatggtg 141583
>dbj|AP004272.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0427D10 Length = 154192 Score = 54.0 bits (27), Expect = 0.002 Identities = 27/27 (100%) Strand = Plus / Minus Query: 1268 atctcagtgaaggtgacttggtcgaat 1294 ||||||||||||||||||||||||||| Sbjct: 104764 atctcagtgaaggtgacttggtcgaat 104738 Score = 48.1 bits (24), Expect = 0.097 Identities = 72/88 (81%) Strand = Plus / Minus Query: 650 ggatatatagcagtgcgggattttcatgattcattgcttaattatgttgtcaaccgcagc 709 ||||| ||||||||||| | || || ||| |||||||||||||| | ||||| ||| Sbjct: 106156 ggatacatagcagtgcgagtttatctggatccattgcttaattatatcgtcaattttagc 106097 Query: 710 agagatgatcccatcattgtggaacagg 737 || |||||||||||| ||||||| |||| Sbjct: 106096 agggatgatcccatcgttgtggagcagg 106069
>ref|NM_001070891.1| Oryza sativa (japonica cultivar-group) Os10g0327800 (Os10g0327800) mRNA, complete cds Length = 1511 Score = 52.0 bits (26), Expect = 0.006 Identities = 44/50 (88%) Strand = Plus / Plus Query: 800 gagtttgacatgaggatcaagaaaggagagcaagaagaggatgatctaca 849 |||| ||| ||||| ||||||| |||||| ||||||||||||||| |||| Sbjct: 864 gagtatgatatgagaatcaagacaggagaacaagaagaggatgatataca 913
>gb|AC099774.6| Oryza sativa chromosome 10 BAC OSJNBa0073L20 genomic sequence, complete sequence Length = 147651 Score = 52.0 bits (26), Expect = 0.006 Identities = 44/50 (88%) Strand = Plus / Plus Query: 800 gagtttgacatgaggatcaagaaaggagagcaagaagaggatgatctaca 849 |||| ||| ||||| ||||||| |||||| ||||||||||||||| |||| Sbjct: 78269 gagtatgatatgagaatcaagacaggagaacaagaagaggatgatataca 78318
>gb|AC090486.3| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBa0093I09, from Chromosome 10, complete sequence Length = 172434 Score = 52.0 bits (26), Expect = 0.006 Identities = 44/50 (88%) Strand = Plus / Plus Query: 800 gagtttgacatgaggatcaagaaaggagagcaagaagaggatgatctaca 849 |||| ||| ||||| ||||||| |||||| ||||||||||||||| |||| Sbjct: 168725 gagtatgatatgagaatcaagacaggagaacaagaagaggatgatataca 168774
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 52.0 bits (26), Expect = 0.006 Identities = 44/50 (88%) Strand = Plus / Plus Query: 800 gagtttgacatgaggatcaagaaaggagagcaagaagaggatgatctaca 849 |||| ||| ||||| ||||||| |||||| ||||||||||||||| |||| Sbjct: 8687628 gagtatgatatgagaatcaagacaggagaacaagaagaggatgatataca 8687677 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 35 ctccaccgccgtcgccgcccgc 56 |||||||||||||||||||||| Sbjct: 14093372 ctccaccgccgtcgccgcccgc 14093351 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 32 ccgctccaccgccgtcgccgcccgc 56 |||||||||||||||||||| |||| Sbjct: 15764976 ccgctccaccgccgtcgccgtccgc 15764952
>dbj|AK100836.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023123E13, full insert sequence Length = 1514 Score = 52.0 bits (26), Expect = 0.006 Identities = 44/50 (88%) Strand = Plus / Plus Query: 800 gagtttgacatgaggatcaagaaaggagagcaagaagaggatgatctaca 849 |||| ||| ||||| ||||||| |||||| ||||||||||||||| |||| Sbjct: 866 gagtatgatatgagaatcaagacaggagaacaagaagaggatgatataca 915
>ref|NM_001066472.1| Oryza sativa (japonica cultivar-group) Os07g0550300 (Os07g0550300) mRNA, complete cds Length = 3177 Score = 50.1 bits (25), Expect = 0.025 Identities = 28/29 (96%) Strand = Plus / Plus Query: 29 cctccgctccaccgccgtcgccgcccgca 57 ||||||||||||||||| ||||||||||| Sbjct: 1662 cctccgctccaccgccgccgccgcccgca 1690
>dbj|AP004401.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0534A03 Length = 153170 Score = 50.1 bits (25), Expect = 0.025 Identities = 28/29 (96%) Strand = Plus / Plus Query: 29 cctccgctccaccgccgtcgccgcccgca 57 ||||||||||||||||| ||||||||||| Sbjct: 107157 cctccgctccaccgccgccgccgcccgca 107185
>dbj|AP005126.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0041B22 Length = 142446 Score = 50.1 bits (25), Expect = 0.025 Identities = 28/29 (96%) Strand = Plus / Plus Query: 29 cctccgctccaccgccgtcgccgcccgca 57 ||||||||||||||||| ||||||||||| Sbjct: 3650 cctccgctccaccgccgccgccgcccgca 3678
>gb|AC123516.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0035B18, complete sequence Length = 123425 Score = 48.1 bits (24), Expect = 0.097 Identities = 30/32 (93%) Strand = Plus / Plus Query: 798 tcgagtttgacatgaggatcaagaaaggagag 829 ||||||||||||||| ||||||||| |||||| Sbjct: 29067 tcgagtttgacatgaagatcaagaacggagag 29098 Score = 44.1 bits (22), Expect = 1.5 Identities = 28/30 (93%) Strand = Plus / Plus Query: 800 gagtttgacatgaggatcaagaaaggagag 829 ||||||||||||| ||||||||| |||||| Sbjct: 26562 gagtttgacatgaagatcaagaatggagag 26591
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 48.1 bits (24), Expect = 0.097 Identities = 30/32 (93%) Strand = Plus / Plus Query: 798 tcgagtttgacatgaggatcaagaaaggagag 829 ||||||||||||||| ||||||||| |||||| Sbjct: 1410272 tcgagtttgacatgaagatcaagaacggagag 1410303 Score = 44.1 bits (22), Expect = 1.5 Identities = 28/30 (93%) Strand = Plus / Plus Query: 800 gagtttgacatgaggatcaagaaaggagag 829 ||||||||||||| ||||||||| |||||| Sbjct: 1407767 gagtttgacatgaagatcaagaatggagag 1407796
>ref|NM_001072184.1| Oryza sativa (japonica cultivar-group) Os11g0130600 (Os11g0130600) mRNA, complete cds Length = 1181 Score = 44.1 bits (22), Expect = 1.5 Identities = 28/30 (93%) Strand = Plus / Plus Query: 800 gagtttgacatgaggatcaagaaaggagag 829 ||||||||||||| ||||||||| |||||| Sbjct: 663 gagtttgacatgaagatcaagaatggagag 692
>gb|AC185293.4| Pan troglodytes BAC clone CH251-501A13 from chromosome unknown, complete sequence Length = 181275 Score = 44.1 bits (22), Expect = 1.5 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1456 atgtgtgtctatttgctgcagtgccagttt 1485 |||||||| ||||||||| ||||||||||| Sbjct: 105892 atgtgtgtatatttgctggagtgccagttt 105921
>gb|AC016780.6| Genomic Sequence For Oryza sativa (japonica cultivar-group) cultivar Nipponbare Clone OSJNBa0061K21 From Chromosome 10, complete sequence Length = 112721 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 35 ctccaccgccgtcgccgcccgc 56 |||||||||||||||||||||| Sbjct: 33010 ctccaccgccgtcgccgcccgc 32989
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 37 ccaccgccgtcgccgcccgcaa 58 |||||||||||||||||||||| Sbjct: 16702930 ccaccgccgtcgccgcccgcaa 16702909
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 29 cctccgctccaccgccgtcgccgccc 54 |||||||||| ||||||||||||||| Sbjct: 20695986 cctccgctccgccgccgtcgccgccc 20696011
>dbj|AP003933.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0066C06 Length = 162304 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 29 cctccgctccaccgccgtcgccgccc 54 |||||||||| ||||||||||||||| Sbjct: 38944 cctccgctccgccgccgtcgccgccc 38969
>dbj|AP004258.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0024F24 Length = 172642 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 29 cctccgctccaccgccgtcgccgccc 54 |||||||||| ||||||||||||||| Sbjct: 157962 cctccgctccgccgccgtcgccgccc 157987
>dbj|AP003577.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0664F03 Length = 184242 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 37 ccaccgccgtcgccgcccgcaa 58 |||||||||||||||||||||| Sbjct: 54417 ccaccgccgtcgccgcccgcaa 54396
>dbj|AK066342.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013068I02, full insert sequence Length = 1182 Score = 44.1 bits (22), Expect = 1.5 Identities = 28/30 (93%) Strand = Plus / Plus Query: 800 gagtttgacatgaggatcaagaaaggagag 829 ||||||||||||| ||||||||| |||||| Sbjct: 664 gagtttgacatgaagatcaagaatggagag 693
>gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nbxb0032I20, complete sequence Length = 144651 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 35 ctccaccgccgtcgccgcccgc 56 |||||||||||||||||||||| Sbjct: 109501 ctccaccgccgtcgccgcccgc 109480
>gb|AC005670.1|AC005670 Homo sapiens chromosome 17, clone hRPK.63_A_1, complete sequence Length = 147902 Score = 44.1 bits (22), Expect = 1.5 Identities = 28/30 (93%) Strand = Plus / Minus Query: 1456 atgtgtgtctatttgctgcagtgccagttt 1485 |||||||| ||||||||| ||||||||||| Sbjct: 93683 atgtgtgtatatttgctggagtgccagttt 93654
>gb|U18082.1|SPU18082 Streptomyces peucetius daunorubicin and doxorubicin resistance determinant (drrAB) gene, partial cds, and aklavinone C-11 hydroxylase (dnrF) gene, complete cds Length = 2201 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 32 ccgctccaccgccgtcgccgcc 53 |||||||||||||||||||||| Sbjct: 1542 ccgctccaccgccgtcgccgcc 1563
>gb|U09844.1|SPU09844 Streptomyces peucetius caesius aklavinone C-11 hydroxylase (dnrF) gene, complete cds Length = 2200 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 32 ccgctccaccgccgtcgccgcc 53 |||||||||||||||||||||| Sbjct: 1541 ccgctccaccgccgtcgccgcc 1562
>gb|CP000462.1| Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome Length = 4744448 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 26 ctacctccgctccaccgccgtcgcc 50 ||||||| ||||||||||||||||| Sbjct: 376082 ctacctctgctccaccgccgtcgcc 376058
>ref|XM_001228239.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_10313) mRNA, complete cds Length = 1080 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 823 aggagagcaagaagaggatga 843 ||||||||||||||||||||| Sbjct: 839 aggagagcaagaagaggatga 859
>gb|AC186051.8| Canis Familiaris chromosome 5, clone XX-212F17, complete sequence Length = 188055 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 100 tgggatgaggggcaggaagga 120 ||||||||||||||||||||| Sbjct: 87230 tgggatgaggggcaggaagga 87210
>ref|XM_635085.1| Dictyostelium discoideum AX4 Rab GTPase (DDB_0230049) mRNA, complete cds Length = 633 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1412 tttcatatttgaatttttagt 1432 ||||||||||||||||||||| Sbjct: 15 tttcatatttgaatttttagt 35
>gb|AY360391.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0023H09, complete sequence Length = 178320 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 29 cctccgctccaccgccgtcgccgcc 53 ||||||| ||||||||||||||||| Sbjct: 96356 cctccgcgccaccgccgtcgccgcc 96332
>ref|NM_023248.1| Mus musculus Shwachman-Bodian-Diamond syndrome homolog (human) (Sbds), mRNA gb|BC003849.1| Mus musculus Shwachman-Bodian-Diamond syndrome homolog (human), mRNA (cDNA clone MGC:6426 IMAGE:3599733), complete cds Length = 1495 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 gcttcagcttctccttcagct 177 ||||||||||||||||||||| Sbjct: 699 gcttcagcttctccttcagct 679
>gb|AE006076.1| Pasteurella multocida subsp. multocida str. Pm70 section 43 of 204 of the complete genome Length = 10206 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 594 ttttctcattaaaattggctaaaaa 618 |||||||||| |||||||||||||| Sbjct: 4336 ttttctcattcaaattggctaaaaa 4312
>gb|AC134528.6| Mus musculus BAC clone RP24-502G8 from chromosome 10, complete sequence Length = 166393 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1268 atctcagtgaaggtgacttgg 1288 ||||||||||||||||||||| Sbjct: 95931 atctcagtgaaggtgacttgg 95951
>gb|AC157546.7| Mus musculus chromosome 19, clone RP23-325I11, complete sequence Length = 173513 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 270 agctctgctgtttcccttgttccag 294 |||||||||||||| |||||||||| Sbjct: 101325 agctctgctgtttctcttgttccag 101301
>gb|AC113029.23| Mus musculus chromosome 5, clone RP23-206J17, complete sequence Length = 223809 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 157 gcttcagcttctccttcagct 177 ||||||||||||||||||||| Sbjct: 69786 gcttcagcttctccttcagct 69806
>gb|AC069435.19| Homo sapiens 3 BAC RP11-384L1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 111861 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 639 tacagatatatggatatatag 659 ||||||||||||||||||||| Sbjct: 67991 tacagatatatggatatatag 67971 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 639 tacagatatatggatatatag 659 ||||||||||||||||||||| Sbjct: 68025 tacagatatatggatatatag 68005 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 639 tacagatatatggatatatag 659 ||||||||||||||||||||| Sbjct: 68059 tacagatatatggatatatag 68039 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 639 tacagatatatggatatatag 659 ||||||||||||||||||||| Sbjct: 68093 tacagatatatggatatatag 68073 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 639 tacagatatatggatatatag 659 ||||||||||||||||||||| Sbjct: 68127 tacagatatatggatatatag 68107 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 639 tacagatatatggatatatag 659 ||||||||||||||||||||| Sbjct: 68161 tacagatatatggatatatag 68141 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 639 tacagatatatggatatatag 659 ||||||||||||||||||||| Sbjct: 68195 tacagatatatggatatatag 68175 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 639 tacagatatatggatatatag 659 ||||||||||||||||||||| Sbjct: 68229 tacagatatatggatatatag 68209 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 639 tacagatatatggatatatag 659 ||||||||||||||||||||| Sbjct: 68263 tacagatatatggatatatag 68243
>dbj|AK168847.1| Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched library, clone:I920060N14 product:Shwachman-Bodian-Diamond syndrome homolog (human), full insert sequence Length = 1464 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 gcttcagcttctccttcagct 177 ||||||||||||||||||||| Sbjct: 686 gcttcagcttctccttcagct 666
>gb|AC024258.9| Homo sapiens chromosome 10 clone RP11-297N15, complete sequence Length = 160658 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 594 ttttctcattaaaattggctaaaaa 618 |||||||||||||| |||||||||| Sbjct: 95145 ttttctcattaaaaatggctaaaaa 95169
>dbj|AK019228.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700089I09 product:OVARC1000321 homolog [Homo sapiens], full insert sequence Length = 1035 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 gcttcagcttctccttcagct 177 ||||||||||||||||||||| Sbjct: 686 gcttcagcttctccttcagct 666
>dbj|AK005079.1| Mus musculus adult male cerebellum cDNA, RIKEN full-length enriched library, clone:1500000G15 product:hypothetical protein, full insert sequence Length = 1454 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 gcttcagcttctccttcagct 177 ||||||||||||||||||||| Sbjct: 676 gcttcagcttctccttcagct 656
>dbj|AK014648.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4733401P19 product:OVARC1000321 homolog [Homo sapiens], full insert sequence Length = 1482 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 gcttcagcttctccttcagct 177 ||||||||||||||||||||| Sbjct: 704 gcttcagcttctccttcagct 684
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 29 cctccgctccaccgccgtcgccgcc 53 ||||||| ||||||||||||||||| Sbjct: 12643400 cctccgcgccaccgccgtcgccgcc 12643424 Score = 42.1 bits (21), Expect = 6.0 Identities = 63/77 (81%) Strand = Plus / Plus Query: 647 tatggatatatagcagtgcgggattttcatgattcattgcttaattatgttgtcaaccgc 706 |||||||| ||||||||||||||| | ||| |||| ||||||||| ||||||| Sbjct: 17379281 tatggatacatagcagtgcgggataggctggatacatttcttaattattttgtcaatttt 17379340 Query: 707 agcagagatgatcccat 723 ||||| ||||||||||| Sbjct: 17379341 agcagggatgatcccat 17379357 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1272 cagtgaaggtgacttggtcga 1292 ||||||||||||||||||||| Sbjct: 17380519 cagtgaaggtgacttggtcga 17380539
>gb|AC099765.1| Caenorhabditis briggsae cosmid CB031I14, complete sequence Length = 94665 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 604 aaaattggctaaaaatagtac 624 ||||||||||||||||||||| Sbjct: 31320 aaaattggctaaaaatagtac 31340
>emb|AL109843.25|HSDJ763G1 Human DNA sequence from clone RP4-763G1 on chromosome 1p31.2-32.1 Contains the 5' end of the gene for interleukin-23 receptor (IL23R), complete sequence Length = 114713 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1098 gtagcttaagaagacatgtga 1118 ||||||||||||||||||||| Sbjct: 12128 gtagcttaagaagacatgtga 12108
>ref|NM_001020599.1| Danio rerio zgc:110555 (zgc:110555), mRNA gb|BC095308.1| Danio rerio zgc:110555, mRNA (cDNA clone MGC:110555 IMAGE:7158225), complete cds Length = 1858 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 tcccaggaggatgaggaggtt 144 ||||||||||||||||||||| Sbjct: 500 tcccaggaggatgaggaggtt 520
>gb|AC018843.4|AC018843 Homo sapiens chromosome 3 clone RP11-900O22 map 3p, complete sequence Length = 211012 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 gcaggaaggagcgtcccagga 131 ||||||||||||||||||||| Sbjct: 194251 gcaggaaggagcgtcccagga 194271
>gb|AC073393.2|AC073393 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0076M18, complete sequence Length = 132647 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 32 ccgctccaccgccgtcgccgcccgc 56 |||||||||||||||||||| |||| Sbjct: 59936 ccgctccaccgccgtcgccgtccgc 59912
>dbj|AP005162.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0051M20 Length = 152702 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 29 cctccgctccaccgccgtcgccgcc 53 ||||||| ||||||||||||||||| Sbjct: 29369 cctccgcgccaccgccgtcgccgcc 29393
>dbj|AP004647.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1267_E11 Length = 117073 Score = 42.1 bits (21), Expect = 6.0 Identities = 63/77 (81%) Strand = Plus / Plus Query: 647 tatggatatatagcagtgcgggattttcatgattcattgcttaattatgttgtcaaccgc 706 |||||||| ||||||||||||||| | ||| |||| ||||||||| ||||||| Sbjct: 62905 tatggatacatagcagtgcgggataggctggatacatttcttaattattttgtcaatttt 62964 Query: 707 agcagagatgatcccat 723 ||||| ||||||||||| Sbjct: 62965 agcagggatgatcccat 62981 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1272 cagtgaaggtgacttggtcga 1292 ||||||||||||||||||||| Sbjct: 64143 cagtgaaggtgacttggtcga 64163
>gb|AC119189.8| Mus musculus chromosome 1, clone RP24-178E16, complete sequence Length = 182530 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1452 gtgtatgtgtgtctatttgct 1472 ||||||||||||||||||||| Sbjct: 81632 gtgtatgtgtgtctatttgct 81612
>emb|AL954160.5|CNS08CCY Oryza sativa chromosome 12, . BAC OSJNBb0078J08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 121243 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 29 cctccgctccaccgccgtcgccgcc 53 ||||||| ||||||||||||||||| Sbjct: 41131 cctccgcgccaccgccgtcgccgcc 41107
>emb|AL831806.5|CNS08CAJ Oryza sativa chromosome 12, . BAC OSJNBb0106P21 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141427 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 29 cctccgctccaccgccgtcgccgcc 53 ||||||| ||||||||||||||||| Sbjct: 71293 cctccgcgccaccgccgtcgccgcc 71317
>emb|AL669911.16| Mouse DNA sequence from clone RP23-65G8 on chromosome 11, complete sequence Length = 205030 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1364 aaggaaagaaaatacacaatg 1384 ||||||||||||||||||||| Sbjct: 168060 aaggaaagaaaatacacaatg 168040
>gb|AC034198.7| Homo sapiens chromosome 3 clone RP11-767C1 map 3p, complete sequence Length = 169005 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 gcaggaaggagcgtcccagga 131 ||||||||||||||||||||| Sbjct: 51222 gcaggaaggagcgtcccagga 51242
>gb|AC018836.5| Homo sapiens chromosome 3 clone RP11-588P9 map 3p, complete sequence Length = 184716 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 gcaggaaggagcgtcccagga 131 ||||||||||||||||||||| Sbjct: 129864 gcaggaaggagcgtcccagga 129884 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 279,051,099 Number of extensions: 15371670 Number of successful extensions: 336368 Number of sequences better than 10.0: 88 Number of HSP's gapped: 336359 Number of HSP's successfully gapped: 190 Length of query: 1575 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1552 Effective length of database: 18,503,978,556 Effective search space: 28718174718912 Effective search space used: 28718174718912 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
