ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf27g11 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK063588:Os06g0472000 | 241 | 6e-64 | 2 | AY224463:Os03g0360700 | 99 | 5e-21 | 3 | AK109429:Os03g0360700 | 99 | 5e-21 | 4 | AK068764:Os03g0360700 | 99 | 5e-21 | 5 | AK104169:Os05g0404200 | 96 | 3e-20 | 6 | AK099324:Os05g0404200 | 96 | 3e-20 | 7 | AK071730:Os05g0404200 | 96 | 3e-20 | 8 | AK101167:Os02g0816400 | 30 | 2.0 | 9 | AK100544:Os02g0816400 | 30 | 2.0 | 10 | Os05g0126800:Os05g0126800 | 30 | 2.6 | 11 | Os12g0477400:Os12g0477400 | 29 | 3.4 | 12 | AK067790:Os08g0531100 | 28 | 7.6 | 13 | AK100855:Os11g0264200 | 28 | 7.6 | 14 | Os12g0428200:Os12g0428200 | 28 | 9.9 | 15 | Os07g0115700:Os07g0115700 | 28 | 9.9 | 16 | Os06g0280500:Os06g0280500 | 28 | 9.9 | 17 | Os04g0120000:Os04g0120000 | 28 | 9.9 |
|---|
>AK063588:Os06g0472000 | Length = 212 Score = 241 bits (614), Expect = 6e-64 Identities = 105/119 (88%), Positives = 113/119 (94%) Frame = +1 Query: 256 NASLSDEELKKRLTKEQYYVTRQKGTERAFTGEYWNTKTPGVYHCICCDTPLFESSTKFD 435 + SL+DEE +KRLTK+QYY+TRQKGTERAFTGEYWNTKTPG+YHC+CCDTPLFESSTKFD Sbjct: 84 STSLTDEEWRKRLTKDQYYITRQKGTERAFTGEYWNTKTPGIYHCVCCDTPLFESSTKFD 143 Query: 436 SGTGWPSYYQPVGDNVKSKLDMSIFFMPRTESLCAVCDAHLGHVFDDGPPPTGKRYCIN 612 SGTGWPSYYQP+GDNVK KLDMSI FMPRTE LCAVCDAHLGHVFDDGP PTGKRYCIN Sbjct: 144 SGTGWPSYYQPIGDNVKCKLDMSIIFMPRTEVLCAVCDAHLGHVFDDGPRPTGKRYCIN 202
>AY224463:Os03g0360700 | Length = 168 Score = 98.6 bits (244), Expect = 5e-21 Identities = 51/117 (43%), Positives = 69/117 (58%), Gaps = 2/117 (1%) Frame = +1 Query: 268 SDEELKKRLTKEQYYVTRQKGTERAFTGEYWNTKTPGVYHCICCDTPLFESSTKFDSGTG 447 SDEE + L+ EQ+ + R KGTE TGEY GVY+C C TPL++S+TKFDSG G Sbjct: 45 SDEEWRAVLSPEQFRILRLKGTELPGTGEYNKFYGDGVYNCAGCGTPLYKSTTKFDSGCG 104 Query: 448 WPSYYQPVGDNVKSKLDMSIFFMPRTESLCAVCDAHLGHVF--DDGPPPTGKRYCIN 612 WP++++ + + D R E CA C HLGHVF + PT +R+C+N Sbjct: 105 WPAFFEGLPGAINRTPDPD---GRRVEITCAACGGHLGHVFKGEGFKTPTDERHCVN 158
>AK109429:Os03g0360700 | Length = 172 Score = 98.6 bits (244), Expect = 5e-21 Identities = 51/117 (43%), Positives = 69/117 (58%), Gaps = 2/117 (1%) Frame = +1 Query: 268 SDEELKKRLTKEQYYVTRQKGTERAFTGEYWNTKTPGVYHCICCDTPLFESSTKFDSGTG 447 SDEE + L+ EQ+ + R KGTE TGEY GVY+C C TPL++S+TKFDSG G Sbjct: 49 SDEEWRAVLSPEQFRILRLKGTELPGTGEYNKFYGDGVYNCAGCGTPLYKSTTKFDSGCG 108 Query: 448 WPSYYQPVGDNVKSKLDMSIFFMPRTESLCAVCDAHLGHVF--DDGPPPTGKRYCIN 612 WP++++ + + D R E CA C HLGHVF + PT +R+C+N Sbjct: 109 WPAFFEGLPGAINRTPDPD---GRRVEITCAACGGHLGHVFKGEGFKTPTDERHCVN 162
>AK068764:Os03g0360700 | Length = 136 Score = 98.6 bits (244), Expect = 5e-21 Identities = 51/117 (43%), Positives = 69/117 (58%), Gaps = 2/117 (1%) Frame = +1 Query: 268 SDEELKKRLTKEQYYVTRQKGTERAFTGEYWNTKTPGVYHCICCDTPLFESSTKFDSGTG 447 SDEE + L+ EQ+ + R KGTE TGEY GVY+C C TPL++S+TKFDSG G Sbjct: 13 SDEEWRAVLSPEQFRILRLKGTELPGTGEYNKFYGDGVYNCAGCGTPLYKSTTKFDSGCG 72 Query: 448 WPSYYQPVGDNVKSKLDMSIFFMPRTESLCAVCDAHLGHVF--DDGPPPTGKRYCIN 612 WP++++ + + D R E CA C HLGHVF + PT +R+C+N Sbjct: 73 WPAFFEGLPGAINRTPDPD---GRRVEITCAACGGHLGHVFKGEGFKTPTDERHCVN 126
>AK104169:Os05g0404200 | Length = 229 Score = 95.9 bits (237), Expect = 3e-20 Identities = 51/117 (43%), Positives = 67/117 (57%), Gaps = 2/117 (1%) Frame = +1 Query: 268 SDEELKKRLTKEQYYVTRQKGTERAFTGEYWNTKTPGVYHCICCDTPLFESSTKFDSGTG 447 S+EE + L+ EQ+ + R KGTE TGEY GVY C C TPL++SSTKF+SG G Sbjct: 101 SEEEWEAILSPEQFRILRLKGTEYPGTGEYDKLFAEGVYECAGCGTPLYKSSTKFNSGCG 160 Query: 448 WPSYYQPVGDNVKSKLDMSIFFMPRTESLCAVCDAHLGHVF--DDGPPPTGKRYCIN 612 WP++Y+ + D R E CA C HLGHVF + PT +R+C+N Sbjct: 161 WPAFYEGFPGAIARTPDPD---GRRIEITCAACGGHLGHVFKGEGFNTPTDERHCVN 214
>AK099324:Os05g0404200 | Length = 213 Score = 95.9 bits (237), Expect = 3e-20 Identities = 51/117 (43%), Positives = 67/117 (57%), Gaps = 2/117 (1%) Frame = +1 Query: 268 SDEELKKRLTKEQYYVTRQKGTERAFTGEYWNTKTPGVYHCICCDTPLFESSTKFDSGTG 447 S+EE + L+ EQ+ + R KGTE TGEY GVY C C TPL++SSTKF+SG G Sbjct: 85 SEEEWEAILSPEQFRILRLKGTEYPGTGEYDKLFAEGVYECAGCGTPLYKSSTKFNSGCG 144 Query: 448 WPSYYQPVGDNVKSKLDMSIFFMPRTESLCAVCDAHLGHVF--DDGPPPTGKRYCIN 612 WP++Y+ + D R E CA C HLGHVF + PT +R+C+N Sbjct: 145 WPAFYEGFPGAIARTPDPD---GRRIEITCAACGGHLGHVFKGEGFNTPTDERHCVN 198
>AK071730:Os05g0404200 | Length = 229 Score = 95.9 bits (237), Expect = 3e-20 Identities = 51/117 (43%), Positives = 67/117 (57%), Gaps = 2/117 (1%) Frame = +1 Query: 268 SDEELKKRLTKEQYYVTRQKGTERAFTGEYWNTKTPGVYHCICCDTPLFESSTKFDSGTG 447 S+EE + L+ EQ+ + R KGTE TGEY GVY C C TPL++SSTKF+SG G Sbjct: 101 SEEEWEAILSPEQFRILRLKGTEYPGTGEYDKLFAEGVYECAGCGTPLYKSSTKFNSGCG 160 Query: 448 WPSYYQPVGDNVKSKLDMSIFFMPRTESLCAVCDAHLGHVF--DDGPPPTGKRYCIN 612 WP++Y+ + D R E CA C HLGHVF + PT +R+C+N Sbjct: 161 WPAFYEGFPGAIARTPDPD---GRRIEITCAACGGHLGHVFKGEGFNTPTDERHCVN 214
>AK101167:Os02g0816400 | Length = 934 Score = 30.0 bits (66), Expect = 2.0 Identities = 21/49 (42%), Positives = 28/49 (57%) Frame = +2 Query: 425 PSLIVVLDGRPIISRLATM*KASLICQSSSCLGPSPCALSATLISGMFS 571 PS + VLDG P +S + SL+C S S + SP ALS + + G FS Sbjct: 690 PSPVSVLDG-PFLSDNSR----SLLCSSESFITASPQALSRSPLIGSFS 733
>AK100544:Os02g0816400 | Length = 934 Score = 30.0 bits (66), Expect = 2.0 Identities = 21/49 (42%), Positives = 28/49 (57%) Frame = +2 Query: 425 PSLIVVLDGRPIISRLATM*KASLICQSSSCLGPSPCALSATLISGMFS 571 PS + VLDG P +S + SL+C S S + SP ALS + + G FS Sbjct: 690 PSPVSVLDG-PFLSDNSR----SLLCSSESFITASPQALSRSPLIGSFS 733
>Os05g0126800:Os05g0126800 | Length = 141 Score = 29.6 bits (65), Expect = 2.6 Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 7/51 (13%) Frame = +1 Query: 511 FMPRTESLCAVCDAHLGHVFDD----GPP---PTGKRYCINRYRFSEV*AP 642 F RT LC C AH+G +DD PP P RY I + AP Sbjct: 86 FTRRTRLLCRKCGAHVGFAYDDRAARSPPSSSPPPPRYDIKIRALHPIEAP 136
>Os12g0477400:Os12g0477400 | Length = 260 Score = 29.3 bits (64), Expect = 3.4 Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 3/106 (2%) Frame = +1 Query: 397 CDTPLFESSTKFDSGTGWPSYYQPVGDNVKSKLDMSIFFMPRTESLCAVCDAHLGHVFDD 576 C + + + TG Y++ G + + +S+ PR+++ V VF Sbjct: 70 CKEAKYVKGRRANRATG-AGYWKATGK--EKPVAVSVAAAPRSQAAAVVVGMKRSLVFYR 126 Query: 577 GPPPTGKR--YCINRYRFSEV*APVVPGRR-IKMKAPARRMQIFVL 705 G PPTGK+ + ++ YR + A + P RR PAR + +VL Sbjct: 127 GKPPTGKKTDWVMHEYRLAG--AGLAPCRRAATADHPARPAEGWVL 170
>AK067790:Os08g0531100 | Length = 488 Score = 28.1 bits (61), Expect = 7.6 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = +2 Query: 302 NSIMSLGRRELRGHSQGNTGTLKPQASTTASAV 400 N ++SLG R G + TGTLK Q ++ A+ Sbjct: 83 NLLLSLGERSFPGRPEKMTGTLKEQLNSITPAL 115
>AK100855:Os11g0264200 | Length = 123 Score = 28.1 bits (61), Expect = 7.6 Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 17/83 (20%) Frame = +1 Query: 379 VYHCICCDTPLFESSTKFDSGTGWPSYYQPVGDNVKS--KLDMSIF-------------- 510 VY C C PL SS+ + SY + V + S +D+S F Sbjct: 7 VYSCGSCGYPLNLSSSNRSTSDVGSSYQKSVKKGLISFITVDLSRFTQVDEISCFPLTWR 66 Query: 511 -FMPRTESLCAVCDAHLGHVFDD 576 + P+T+ LC C A +G+ + + Sbjct: 67 SYRPKTKLLCRKCGASIGYGYGE 89
>Os12g0428200:Os12g0428200 | Length = 694 Score = 27.7 bits (60), Expect = 9.9 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = +2 Query: 533 CALSATLISGMFSTTGLRRRERDIASTG 616 CAL A L+S + STT L+R+ R G Sbjct: 521 CALVAGLLSALVSTTSLQRQHRTAGGGG 548
>Os07g0115700:Os07g0115700 | Length = 2820 Score = 27.7 bits (60), Expect = 9.9 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 2/61 (3%) Frame = +2 Query: 365 LKPQASTTASAVTPLCLSHLPSLIVVLDGRPIISRL--ATM*KASLICQSSSCLGPSPCA 538 L QA T V L +P +++ LDGRP+ L + A+L +SC P P A Sbjct: 899 LSQQAPTLVVDVPDGVLYDVPMVVLDLDGRPLAHSLPSSVADNAALHAFLTSCSRPLPPA 958 Query: 539 L 541 L Sbjct: 959 L 959
>Os06g0280500:Os06g0280500 | Length = 1168 Score = 27.7 bits (60), Expect = 9.9 Identities = 16/47 (34%), Positives = 18/47 (38%) Frame = +1 Query: 343 FTGEYWNTKTPGVYHCICCDTPLFESSTKFDSGTGWPSYYQPVGDNV 483 FT + K G H S K TGWP Y QP G N+ Sbjct: 1046 FTAHKYYRKRGGPVH--------IPSQKKLSVRTGWPCYKQPPGTNL 1084
>Os04g0120000:Os04g0120000 | Length = 2422 Score = 27.7 bits (60), Expect = 9.9 Identities = 16/47 (34%), Positives = 18/47 (38%) Frame = +1 Query: 343 FTGEYWNTKTPGVYHCICCDTPLFESSTKFDSGTGWPSYYQPVGDNV 483 FT + K G H S K TGWP Y QP G N+ Sbjct: 1035 FTAHKYYRKRGGPVH--------IPSQKKLSVRTGWPCYKQPPGTNL 1073 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 20,233,024 Number of extensions: 438772 Number of successful extensions: 1024 Number of sequences better than 10.0: 17 Number of HSP's gapped: 1018 Number of HSP's successfully gapped: 17 Length of query: 272 Length of database: 15,399,855 Length adjustment: 99 Effective length of query: 173 Effective length of database: 11,435,796 Effective search space: 1978392708 Effective search space used: 1978392708 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
