>LOC_Os06g27760:12006.t02481:unspliced-genomic peptide methionine sulfoxide reductase msrB, putative, expressed|
          Length = 2850
 Score =  164 bits (352), Expect(3) = 4e-65
 Identities = 62/67 (92%), Positives = 63/67 (94%)
 Frame = +1 / +3

                                                                        
Query: 418  SSTKFDSGTGWPSYYQPVGDNVKSKLDMSIFFMPRTESLCAVCDAHLGHVFDDGPPPTGK 597
            SSTKFDSGTGWPSYYQP+GDNVK KLDMSI FMPRTE LCAVCDAHLGHVFDDGP PTGK
Sbjct: 1677 SSTKFDSGTGWPSYYQPIGDNVKCKLDMSIIFMPRTEVLCAVCDAHLGHVFDDGPRPTGK 1856

                   
Query: 598  RYCINRY 618
            RYCINRY
Sbjct: 1857 RYCINRY 1877



 Score = 66.1 bits (138), Expect(3) = 4e-65
 Identities = 20/22 (90%), Positives = 22/22 (100%)
 Frame = +1 / +3

                                  
Query: 352  EYWNTKTPGVYHCICCDTPLFE 417
            EYWNTKTPG+YHC+CCDTPLFE
Sbjct: 1470 EYWNTKTPGIYHCVCCDTPLFE 1535



 Score = 65.2 bits (136), Expect(3) = 4e-65
 Identities = 25/32 (78%), Positives = 30/32 (93%)
 Frame = +1 / +3

                                            
Query: 256  NASLSDEELKKRLTKEQYYVTRQKGTERAFTG 351
            + SL+DEE +KRLTK+QYY+TRQKGTERAFTG
Sbjct: 1287 STSLTDEEWRKRLTKDQYYITRQKGTERAFTG 1382



 Score =  127 bits (273), Expect(4) = 5e-49
 Identities = 56/67 (83%), Positives = 58/67 (86%)
 Frame = -2 / -3

                                                                        
Query: 617  YLLMQYLFPVGGGPSSKTCPR*ASQTAHRDSVRGMKKIDISSLLFTLSPTG***DGHPVP 438
            YLL+QYLFPVG GPSS TCPR*ASQTAH  SVRGM  +DISSL FTLSP G** DGHPVP
Sbjct: 1876 YLLIQYLFPVGRGPSSNTCPR*ASQTAHSTSVRGMNMMDISSLHFTLSPMG**YDGHPVP 1697

                   
Query: 437  LSNLVDD 417
            LSNLVDD
Sbjct: 1696 LSNLVDD 1676



 Score = 61.6 bits (128), Expect(4) = 5e-49
 Identities = 28/37 (75%), Positives = 30/37 (81%)
 Frame = -2 / -3

                                                 
Query: 365  VFQYSPVNALSVPFCRVT*YCSFVRRFFNSSSLRDAL 255
            V Q  PVNALSVPFCRV *Y SFVRRF +SSS+RD L
Sbjct: 1396 VKQSYPVNALSVPFCRVM*Y*SFVRRFLHSSSVRDVL 1286



 Score = 46.4 bits (95), Expect(4) = 5e-49
 Identities = 19/22 (86%), Positives = 19/22 (86%)
 Frame = -2 / -3

                                  
Query: 416  SNRGVSQQMQW*TPGVLVFQYS 351
            S RGVSQQ QW* PGVLVFQYS
Sbjct: 1534 SKRGVSQQTQW*MPGVLVFQYS 1469



 Score = 25.4 bits (49), Expect(4) = 5e-49
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = -2 / -3

                         
Query: 230 DGEGDDGAAPMART 189
           D + DD AAPMART
Sbjct: 331 DDDEDDEAAPMART 290



 Score = 90.4 bits (191), Expect(3) = 9e-30
 Identities = 39/69 (56%), Positives = 50/69 (72%)
 Frame = -1 / -2

                                                                        
Query: 618  IPVDAISLSRRRRPVVENMPEMSVADSAQGLGPRHEED*HIKLAFHIVANRLIIGRPSST 439
            IP+D +S      P+++++P+MSV DS Q L PRHE D HIKLA +I++N LII RP ST
Sbjct: 1877 IPIDTVSFPCWSWPIIKHVPQMSVTDSTQHLSPRHEYDGHIKLALYIISNGLII*RPPST 1698

                     
Query: 438  TIKLGR*LK 412
            TIK GR* K
Sbjct: 1697 TIKFGR*PK 1671



 Score = 45.1 bits (92), Expect(3) = 9e-30
 Identities = 18/23 (78%), Positives = 20/23 (86%)
 Frame = -1 / -2

                                   
Query: 417  LKQRGVTADAVVDAWGFSVPVFP 349
            LK+RGVTAD +VDA GF VPVFP
Sbjct: 1535 LKKRGVTADTMVDARGFGVPVFP 1467



 Score = 40.5 bits (82), Expect(3) = 9e-30
 Identities = 19/23 (82%), Positives = 19/23 (82%)
 Frame = -3 / -1

                                   
Query: 328  PSAE*HNTVLL*GASSTPHHSEM 260
            PSAE* NT LL GASSTPH SEM
Sbjct: 1359 PSAE*CNTDLLSGASSTPHQSEM 1291



 Score = 73.9 bits (155), Expect(3) = 6e-24
 Identities = 38/74 (51%), Positives = 44/74 (59%)
 Frame = +2 / +1

                                                                        
Query: 413  LSHLPSLIVVLDGRPIISRLATM*KASLICQSSSCLGPSPCALSATLISGMFSTTGLRRR 592
            L H P+LIVVL GR II+ L  M* ASLIC S SCLG   C LS TLI G     G  ++
Sbjct: 1672 LGHRPNLIVVLGGRHIINPLEIM*SASLICPSYSCLGLRCCVLSVTLIWGTCLMMGHDQQ 1851

                          
Query: 593  ERDIASTGIASLKF 634
             +D  S GI  + F
Sbjct: 1852 GKDTVSIGICEIFF 1893



 Score = 41.4 bits (84), Expect(3) = 6e-24
 Identities = 18/23 (78%), Positives = 19/23 (82%)
 Frame = +2 / +1

                                   
Query: 350  GNTGTLKPQASTTASAVTPLCLS 418
            GNTGT KP+AST  SAVTPL LS
Sbjct: 1468 GNTGTPKPRASTIVSAVTPLFLS 1536



 Score = 40.9 bits (83), Expect(3) = 6e-24
 Identities = 19/29 (65%), Positives = 25/29 (86%)
 Frame = +3 / +2

                                         
Query: 261  ISE**GVEEAPHKRTVLCHSAEGN*EGIH 347
            IS+**GVEEAP KR+VL +SAEG+ + I+
Sbjct: 1292 ISD**GVEEAPDKRSVLHYSAEGHRKSIY 1378



 Score = 50.1 bits (103), Expect(3) = 9e-17
 Identities = 23/36 (63%), Positives = 23/36 (63%)
 Frame = -3 / -1

                                                
Query: 523  SEA*RRLTYQACFSHCRQPADNRTAIQYHYQTW*MT 416
            SEA*   TYQAC  H  Q  DN TA QYHYQ W MT
Sbjct: 1782 SEA*I*WTYQACTLHYLQWVDNMTATQYHYQIWSMT 1675



 Score = 42.8 bits (87), Expect(3) = 9e-17
 Identities = 17/24 (70%), Positives = 19/24 (79%)
 Frame = -3 / -1

                                    
Query: 421  MTQTEGCHSRCSGRRLGF*CSSIP 350
            +TQ EGCHSR +GR  GF CSSIP
Sbjct: 1539 LTQKEGCHSRHNGRCPGFWCSSIP 1468



 Score = 38.6 bits (78), Expect(3) = 9e-17
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = -1 / -2

                                               
Query: 357  VFPCECXXXXXXXSDIILFFCEALLQLLITQRCVI 253
            + P +C       S++IL FC+AL  LLI+QRC +
Sbjct: 1388 IVPSKCSFCALLPSNVILIFCQALPPLLISQRCTV 1284



 Score = 60.2 bits (125), Expect(2) = 2e-11
 Identities = 25/37 (67%), Positives = 31/37 (83%)
 Frame = +3 / +2

                                                 
Query: 414  *VIYQV**WYWMAVLLSAGWRQCEKQA*YVNLLHASD 524
            *VI Q+**WYW+AV+LS  WR C+ QA*YV+ +HASD
Sbjct: 1673 *VIDQI**WYWVAVILSTHWR*CKVQA*YVHHIHASD 1783



 Score = 32.7 bits (65), Expect(2) = 2e-11
 Identities = 18/31 (58%), Positives = 20/31 (64%)
 Frame = +2 / +1

                                           
Query: 260  HL*VMRS*RSASQKNSIMSLGRRELRGHSQG 352
            HL*+MRS  SA QK SI  LGRR  + H  G
Sbjct: 1291 HL*LMRSGGSA*QKISITLLGRRAQKEHLLG 1383

>LOC_Os03g24600:12003.t02154:unspliced-genomic peptide methionine sulfoxide reductase msrB, putative, expressed|
          Length = 3668

 Score = 63.4 bits (132), Expect(3) = 1e-14
 Identities = 22/40 (55%), Positives = 30/40 (75%)
 Frame = +1 / +3

                                                    
Query: 346  TGEYWNTKTPGVYHCICCDTPLFESSTKFDSGTGWPSYYQ 465
            TGEY      GVY+C  C TPL++S+TKFDSG GWP++++
Sbjct: 3081 TGEYNKFYGDGVYNCAGCGTPLYKSTTKFDSGCGWPAFFE 3200



 Score = 32.2 bits (64), Expect(3) = 1e-14
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = +1 / +2

                             
Query: 520  RTESLCAVCDAHLGHVF 570
            R E  CA C  HLGHVF
Sbjct: 3332 RVEITCAACGGHLGHVF 3382



 Score = 29.0 bits (57), Expect(3) = 1e-14
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +1 / +2

                                  
Query: 268 SDEELKKRLTKEQYYVTRQKGTE 336
           SDEE +  L+ EQ+ + R KGTE
Sbjct: 200 SDEEWRAVLSPEQFRILRLKGTE 268



 Score = 37.7 bits (76), Expect = 0.10
 Identities = 20/36 (55%), Positives = 20/36 (55%)
 Frame = -2 / -2

                                                
Query: 452  GHPVPLSNLVDDSNRGVSQQMQW*TPGVLVFQYSPV 345
            G P P SNLV D  RGV Q  Q *TP      YSPV
Sbjct: 3187 GQPQPESNLVVDLYRGVPQPAQL*TPSP*NLLYSPV 3080

>LOC_Os05g33510:12005.t02946:unspliced-genomic expressed protein|
          Length = 2828

 Score = 64.8 bits (135), Expect(3) = 2e-14
 Identities = 23/40 (57%), Positives = 29/40 (72%)
 Frame = +1 / +3

                                                    
Query: 346  TGEYWNTKTPGVYHCICCDTPLFESSTKFDSGTGWPSYYQ 465
            TGEY      GVY C  C TPL++SSTKF+SG GWP++Y+
Sbjct: 2154 TGEYDKLFAEGVYECAGCGTPLYKSSTKFNSGCGWPAFYE 2273



 Score = 31.8 bits (63), Expect(3) = 2e-14
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = +1 / +1

                             
Query: 520  RTESLCAVCDAHLGHVF 570
            R E  CA C  HLGHVF
Sbjct: 2431 RIEITCAACGGHLGHVF 2481



 Score = 26.7 bits (52), Expect(3) = 2e-14
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +1 / +2

                                  
Query: 268 SDEELKKRLTKEQYYVTRQKGTE 336
           S+EE +  L+ EQ+ + R KGTE
Sbjct: 326 SEEEWEAILSPEQFRILRLKGTE 394



 Score = 35.0 bits (70), Expect = 0.70
 Identities = 17/36 (47%), Positives = 17/36 (47%)
 Frame = -2 / -2

                                                
Query: 452  GHPVPLSNLVDDSNRGVSQQMQW*TPGVLVFQYSPV 345
            G P P  NLVDD   GV      *TP      YSPV
Sbjct: 2260 GQPQPELNLVDDLYNGVPHPAHS*TPSAKSLSYSPV 2153

>LOC_Os01g01295:12001.t06777:unspliced-genomic expressed protein|
          Length = 2619

 Score = 36.8 bits (74), Expect = 0.20
 Identities = 16/30 (53%), Positives = 20/30 (66%)
 Frame = +2 / +3

                                         
Query: 488 ASLICQSSSCLGPSPCALSATLISGMFSTT 577
           AS  C+SSSC  P PCA ++TL S   ST+
Sbjct: 597 ASTSCRSSSCSRPRPCATTSTLPSTTSSTS 686

>LOC_Os07g31300:12007.t02817:unspliced-genomic ATP synthase delta chain, mitochondrial precursor, putative,|
           expressed
          Length = 2542

 Score = 35.4 bits (71), Expect = 0.51
 Identities = 18/40 (45%), Positives = 20/40 (50%)
 Frame = +2 / +2

                                                   
Query: 506 SSSCLGPSPCALSATLISGMFSTTGLRRRERDIASTGIAS 625
           SS  LGP  CA     +SGM +  GLRR  RD    G  S
Sbjct: 398 SSVLLGPQICACGVARVSGMCAIWGLRRAIRDRGWVGQGS 517



 Score = 34.1 bits (68), Expect = 1.3
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -1 / -2

                                                
Query: 615 PVDAISLSRRRRPVVENMPEMSVADSAQGLGPRHEED 505
           P   +SL  RR+P + ++PE      AQ  GPR  E+
Sbjct: 507 PTQPLSLIARRKPQIAHIPETLATPHAQIWGPRRTEE 397

>LOC_Os03g04370:12003.t00316:unspliced-genomic expressed protein|
          Length = 723

 Score = 34.1 bits (68), Expect = 1.3
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +1 / +2

                                 
Query: 520 RTESLCAVCDAHLGHVFDDGPP 585
           RT   C  C   LG+V+DDGPP
Sbjct: 374 RTRISCDACGRLLGYVYDDGPP 439

>LOC_Os03g24120:12003.t02107:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 3141

 Score = 27.2 bits (53), Expect(2) = 1.8
 Identities = 14/38 (36%), Positives = 16/38 (42%)
 Frame = -2 / +3

                                                 
Query: 752 TGRTRLLQTTPEIVHTKTKICMRRAGAFILILLPGTTG 639
           TGR     T P  V      C  RAG+ I   L G +G
Sbjct: 126 TGRGMPCATLPGAVRLLPPFCYGRAGSAIFFFLHGCSG 239



 Score = 23.5 bits (45), Expect(2) = 1.8
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2 / +2

                          
Query: 578 PSSKTCPR*ASQTAH 534
           PSS+TC R +S  AH
Sbjct: 293 PSSRTCARCSSGCAH 337

>LOC_Os02g14770:12002.t01271:unspliced-genomic phosphoenolpyruvate carboxylase 1, putative, expressed|
          Length = 11795

 Score = 32.7 bits (65), Expect = 3.4
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -1 / +2

                                 
Query: 306  LFFCEALLQLLITQRCVIHFP 244
            L  C ALLQLL++  C++ FP
Sbjct: 4427 LELCSALLQLLLSMECILQFP 4489

>LOC_Os02g36810:12002.t03318:unspliced-genomic cytokinin-O-glucosyltransferase 2, putative|
          Length = 1605

 Score = 32.2 bits (64), Expect = 4.7
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +2 / +2

                                         
Query: 500 CQSSSCLGPSPCALSATLISGMFSTTGLRR 589
           C++  C  P+P ALSAT I+   ST  L R
Sbjct: 449 CRARCCGRPAPAALSATAITASSSTRDLSR 538

>LOC_Os11g27430:12011.t02357:unspliced-genomic NB-ARC domain containing protein|
          Length = 4525

 Score = 32.2 bits (64), Expect = 4.7
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -1 / +2

                                              
Query: 693  LHAARWCFHLDSSSRDYWGLNFREAIPVDAISLS 592
            +H  R+   +D   R+YW    ++A PVD  S S
Sbjct: 2327 IHLYRFFIVIDDIQREYWNSTIKDAFPVDTGSSS 2428

>LOC_Os02g07760:12002.t00672:unspliced-genomic succinate semialdehyde dehydrogenase, mitochondrial precursor,|
            putative, expressed
          Length = 7849

 Score = 32.2 bits (64), Expect = 4.7
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +1 / +3

                                    
Query: 727  VCSSLVRPVCTCKLIIFRFVKPFV 798
            +CS+L + +C C LIIF    PFV
Sbjct: 2250 ICSNLDKLICFCLLIIFTTYTPFV 2321

>LOC_Os12g40050:12012.t03684:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 4999

 Score = 31.8 bits (63), Expect = 6.4
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +2 / +2

                                        
Query: 350  GNTGTLKPQASTTASAVTPLCLSHLPSL 433
            G+  TL P  S++ +A  P CL+H+P L
Sbjct: 2360 GSLITLPPAPSSSPTAYIPTCLAHIPHL 2443

>LOC_Os09g11380:12009.t00928:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 8625

 Score = 31.8 bits (63), Expect = 6.4
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +2 / -3

                                                  
Query: 314  SLGRRELRGHSQGNTGTLKPQASTTASAVTPLCLSHLP 427
            +LG  +  GH +  + T+K Q  T +SA++ LC    P
Sbjct: 4618 TLGTNDELGHKKQASATIKKQVITLSSAMSLLCFKRSP 4505

>LOC_Os01g33410:12001.t02908:unspliced-genomic transposon protein, putative, unclassified, expressed|
          Length = 3909

 Score = 31.8 bits (63), Expect = 6.4
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -2 / +2

                                      
Query: 326 FCRVT*YCSFVRRFFNSSSLRDALSTF 246
           FC++   CS    FF+ S L+D+LS F
Sbjct: 740 FCKMRWVCSIALSFFSISKLQDSLSVF 820

>LOC_Os03g31446:12003.t02741:unspliced-genomic conserved hypothetical protein|
          Length = 3105

 Score = 31.8 bits (63), Expect = 6.4
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -1 / -1

                                                 
Query: 651  RDYWGLNFREAIPVDAISLSRRRRPVVENMPEMSVAD 541
            RD++   F E   VDA+  S    P V+ +P++ V D
Sbjct: 2592 RDFFRTTFAECASVDAVVASCFAAPPVDELPDVGVGD 2482

>LOC_Os02g54640:12002.t05043:unspliced-genomic glutamate receptor 2.9 precursor, putative, expressed|
          Length = 6890

 Score = 31.3 bits (62), Expect = 8.8
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +2 / +1

                                                 
Query: 488  ASLICQSSSCLGPSPCALSATLISGMFSTTGLRRRER 598
            AS+ C SS    P+PC+ S +  S   S T   RR R
Sbjct: 6127 ASVGCSSSPAWSPAPCSSSTSPSSSTASATSSVRRRR 6237

>LOC_Os02g17534:12002.t01546:unspliced-genomic fucosyltransferase 8, putative, expressed|
          Length = 6984

 Score = 31.3 bits (62), Expect = 8.8
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +2 / -1

                                                        
Query: 464 SRLATM*KASLICQSSSCLGPSPCALSATLISGMFSTTGLRRRER 598
           SR AT   A++    +SCL PS  +   T  +  + T   RRR R
Sbjct: 432 SRPATAATAAMAASPASCLPPSSSSARTTAAAAAWRTARRRRRRR 298

>LOC_Os05g03590:12005.t00256:unspliced-genomic expressed protein|
          Length = 565

 Score = 31.3 bits (62), Expect = 8.9
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +1 / +2

                                 
Query: 511 FMPRTESLCAVCDAHLGHVFDD 576
           F  RT  LC  C AH+G  +DD
Sbjct: 395 FTRRTRLLCRKCGAHVGFAYDD 460


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 282,492,274
Number of extensions: 4119028
Number of successful extensions: 15004
Number of sequences better than 10.0: 18
Length of query: 272
Length of database: 55,613,886
Length adjustment: 49
Effective length of query: 223
Effective length of database: 52,856,264
Effective search space: 11786946872
Effective search space used: 11786946872
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)