| Clone Name | FLbaf27g11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009293.1| Triticum aestivum clone wlm0.pk039.d17:fis, full insert mRNA sequence Length = 870 Score = 1001 bits (505), Expect = 0.0 Identities = 659/710 (92%), Gaps = 14/710 (1%) Strand = Plus / Plus Query: 78 ggtctcgtcccgagcgcacctgtcctcctacctcccgcccctcctcccctccgcgcgacc 137 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7 ggtctcgtcccgagcgcacctgtcctcctacctcccgcccctcctcccctccgcgcgacc 66 Query: 138 ccgatccacgacaacccgcagctgcggcggcagcagttacaggcggaccgccgttcgcgc 197 ||| ||| ||| ||||||||| ||||||||||| | ||||||||||||||||||||| Sbjct: 67 ccggcccaggacgacccgcagcggcggcggcagc---ttcaggcggaccgccgttcgcgc 123 Query: 198 catgggcgccgcgccgtcgtcgccctcgccgtccggacaagccccagggaaagtggataa 257 |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct: 124 catgggcgccgcgccgtcttcgccctcgccgtccggacaagccccagggaaagcagataa 183 Query: 258 cgcatctctgagtgatgaggagttgaagaagcgcctcacaaaagaacagtattatgtcac 317 ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 184 cgcgtctctgagtgatgaggagttgaagaagcgcctcacaaaagaacagtattacgtcac 243 Query: 318 tcggcagaagggaactgagagggcattcacaggggaatactggaacactaaaaccccagg 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 tcggcagaagggaactgagagggcattcacaggggaatactggaacactaaaaccccagg 303 Query: 378 cgtctaccactgcatctgctgtgacacccctctgtttgagtcatctaccaagtttgatag 437 | ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 304 catctaccattgcatctgctgtgacacccctctgtttgagtcatcaaccaagtttgatag 363 Query: 438 tggtactggatggccgtcctattatcagccggttggcgacaatgtgaaaagcaagcttga 497 ||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| Sbjct: 364 tggcactggatggccgtcctattaccagccggttagcgacaatgtgaaaagcaagcttga 423 Query: 498 tatgtcaatcttcttcatgcctcggaccgagtccctgtgcgctgtctgcgacgctcatct 557 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 424 tatgtcaatcttcttcatgcctcggaccgagtccctgtgcgccgtctgcgacgctcacct 483 Query: 558 cgggcatgttttcgacgacgggcctccgccgacgggaaagagatattgcatcaacaggta 617 ||||||||||||||||||||||| |||||||| || |||||||||||||||||||| Sbjct: 484 ggggcatgttttcgacgacgggccaccgccgactgggaagagatattgcatcaacag--- 540 Query: 618 tcgcttctctgaagtttaagccccagtagtccctggaagaagaatcaagatgaaagcacc 677 ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 541 -cgcgtctctgaagtttaagccccagtagtccctggaagaagaatcaagatgcaagcacc 599 Query: 678 agcgcgccgcatgcaaattttcgttttggtatgaactatttccggtgtagtctgtagtag 737 | |||| | |||| ||||||| |||| |||||||||||||||| | |||||||| Sbjct: 600 atcgcgtcccatgtaaattttggtttgggtatgaactatttccag-------tgtagtag 652 Query: 738 cctagtccgcccggtttgcacatgtaaactgataattttcaggtttgtaa 787 |||| |||||||||| ||| |||||||| ||||||||| ||||||||||| Sbjct: 653 cctaatccgcccggtctgcgcatgtaaattgataatttccaggtttgtaa 702
>emb|CT833359.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA001J19, full insert sequence Length = 858 Score = 262 bits (132), Expect = 2e-66 Identities = 261/304 (85%) Strand = Plus / Plus Query: 260 catctctgagtgatgaggagttgaagaagcgcctcacaaaagaacagtattatgtcactc 319 ||||||||| ||||||||||| || ||||||||| |||||||| |||||||| | |||| Sbjct: 264 catctctgactgatgaggagtggaggaagcgcctgacaaaagatcagtattacattactc 323 Query: 320 ggcagaagggaactgagagggcattcacaggggaatactggaacactaaaaccccaggcg 379 |||||||||| || || || ||||| || ||||||||||||||||| |||||||| ||| Sbjct: 324 ggcagaagggcacagaaagagcatttactggggaatactggaacaccaaaaccccgggca 383 Query: 380 tctaccactgcatctgctgtgacacccctctgtttgagtcatctaccaagtttgatagtg 439 ||||||| || ||||||||||||||||||| ||||||||||| ||||| |||||||||| Sbjct: 384 tctaccattgtgtctgctgtgacacccctctttttgagtcatcgaccaaatttgatagtg 443 Query: 440 gtactggatggccgtcctattatcagccggttggcgacaatgtgaaaagcaagcttgata 499 ||||||| |||||||| |||||||| || |||| || ||||| || |||||||||||| Sbjct: 444 gtactgggtggccgtcatattatcaacccattggagataatgtaaagtgcaagcttgata 503 Query: 500 tgtcaatcttcttcatgcctcggaccgagtccctgtgcgctgtctgcgacgctcatctcg 559 |||| ||| | |||||||||||||| ||| ||||| |||||||| ||||||||||| | Sbjct: 504 tgtccatcatattcatgcctcggactgaggtgctgtgtgctgtctgtgacgctcatctgg 563 Query: 560 ggca 563 |||| Sbjct: 564 ggca 567
>ref|NM_001064155.1| Oryza sativa (japonica cultivar-group) Os06g0472000 (Os06g0472000) mRNA, complete cds Length = 856 Score = 262 bits (132), Expect = 2e-66 Identities = 261/304 (85%) Strand = Plus / Plus Query: 260 catctctgagtgatgaggagttgaagaagcgcctcacaaaagaacagtattatgtcactc 319 ||||||||| ||||||||||| || ||||||||| |||||||| |||||||| | |||| Sbjct: 254 catctctgactgatgaggagtggaggaagcgcctgacaaaagatcagtattacattactc 313 Query: 320 ggcagaagggaactgagagggcattcacaggggaatactggaacactaaaaccccaggcg 379 |||||||||| || || || ||||| || ||||||||||||||||| |||||||| ||| Sbjct: 314 ggcagaagggcacagaaagagcatttactggggaatactggaacaccaaaaccccgggca 373 Query: 380 tctaccactgcatctgctgtgacacccctctgtttgagtcatctaccaagtttgatagtg 439 ||||||| || ||||||||||||||||||| ||||||||||| ||||| |||||||||| Sbjct: 374 tctaccattgtgtctgctgtgacacccctctttttgagtcatcgaccaaatttgatagtg 433 Query: 440 gtactggatggccgtcctattatcagccggttggcgacaatgtgaaaagcaagcttgata 499 ||||||| |||||||| |||||||| || |||| || ||||| || |||||||||||| Sbjct: 434 gtactgggtggccgtcatattatcaacccattggagataatgtaaagtgcaagcttgata 493 Query: 500 tgtcaatcttcttcatgcctcggaccgagtccctgtgcgctgtctgcgacgctcatctcg 559 |||| ||| | |||||||||||||| ||| ||||| |||||||| ||||||||||| | Sbjct: 494 tgtccatcatattcatgcctcggactgaggtgctgtgtgctgtctgtgacgctcatctgg 553 Query: 560 ggca 563 |||| Sbjct: 554 ggca 557
>dbj|AK063588.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A09, full insert sequence Length = 856 Score = 262 bits (132), Expect = 2e-66 Identities = 261/304 (85%) Strand = Plus / Plus Query: 260 catctctgagtgatgaggagttgaagaagcgcctcacaaaagaacagtattatgtcactc 319 ||||||||| ||||||||||| || ||||||||| |||||||| |||||||| | |||| Sbjct: 254 catctctgactgatgaggagtggaggaagcgcctgacaaaagatcagtattacattactc 313 Query: 320 ggcagaagggaactgagagggcattcacaggggaatactggaacactaaaaccccaggcg 379 |||||||||| || || || ||||| || ||||||||||||||||| |||||||| ||| Sbjct: 314 ggcagaagggcacagaaagagcatttactggggaatactggaacaccaaaaccccgggca 373 Query: 380 tctaccactgcatctgctgtgacacccctctgtttgagtcatctaccaagtttgatagtg 439 ||||||| || ||||||||||||||||||| ||||||||||| ||||| |||||||||| Sbjct: 374 tctaccattgtgtctgctgtgacacccctctttttgagtcatcgaccaaatttgatagtg 433 Query: 440 gtactggatggccgtcctattatcagccggttggcgacaatgtgaaaagcaagcttgata 499 ||||||| |||||||| |||||||| || |||| || ||||| || |||||||||||| Sbjct: 434 gtactgggtggccgtcatattatcaacccattggagataatgtaaagtgcaagcttgata 493 Query: 500 tgtcaatcttcttcatgcctcggaccgagtccctgtgcgctgtctgcgacgctcatctcg 559 |||| ||| | |||||||||||||| ||| ||||| |||||||| ||||||||||| | Sbjct: 494 tgtccatcatattcatgcctcggactgaggtgctgtgtgctgtctgtgacgctcatctgg 553 Query: 560 ggca 563 |||| Sbjct: 554 ggca 557
>gb|DQ244323.1| Zea mays clone 4860 mRNA sequence Length = 971 Score = 244 bits (123), Expect = 4e-61 Identities = 291/347 (83%) Strand = Plus / Plus Query: 265 ctgagtgatgaggagttgaagaagcgcctcacaaaagaacagtattatgtcactcggcag 324 |||||||| ||||||| |||||||||||| || |||| ||||||||||| ||||||||| Sbjct: 283 ctgagtgaagaggagtggaagaagcgcctgactgaagagcagtattatgttactcggcag 342 Query: 325 aagggaactgagagggcattcacaggggaatactggaacactaaaaccccaggcgtctac 384 ||||| ||||| || |||||||| |||||||||||||| ||||||||||||||| | || Sbjct: 343 aagggcactgaaagagcattcactggggaatactggaatactaaaaccccaggcatttat 402 Query: 385 cactgcatctgctgtgacacccctctgtttgagtcatctaccaagtttgatagtggtact 444 || || ||||||| ||||||||||||||| ||||||| ||||| ||||||||||||||| Sbjct: 403 cagtgtgtctgctgcgacacccctctgtttcagtcatcaaccaaatttgatagtggtact 462 Query: 445 ggatggccgtcctattatcagccggttggcgacaatgtgaaaagcaagcttgatatgtca 504 || ||||| ||||||||| | || |||| || ||||| || |||||||||||||||||| Sbjct: 463 gggtggccatcctattataaaccaattggtgaaaatgtcaagagcaagcttgatatgtca 522 Query: 505 atcttcttcatgcctcggaccgagtccctgtgcgctgtctgcgacgctcatctcgggcat 564 ||| | || ||||| ||||||||| || || || ||| || |||||||| |||||| Sbjct: 523 atcatttttatgccccggaccgaggtgctctgtgcaacctgtgatgctcatctggggcat 582 Query: 565 gttttcgacgacgggcctccgccgacgggaaagagatattgcatcaa 611 || ||||| |||||||| || || || || |||||||| || ||||| Sbjct: 583 gtcttcgatgacgggccaccaccaacagggaagagatactgtatcaa 629 Score = 52.0 bits (26), Expect = 0.003 Identities = 32/34 (94%) Strand = Plus / Plus Query: 186 cgccgttcgcgccatgggcgccgcgccgtcgtcg 219 |||||| |||||||||||| |||||||||||||| Sbjct: 186 cgccgtccgcgccatgggctccgcgccgtcgtcg 219
>gb|AY111038.1| Zea mays CL826_-1 mRNA sequence Length = 839 Score = 194 bits (98), Expect = 3e-46 Identities = 258/313 (82%) Strand = Plus / Plus Query: 299 aagaacagtattatgtcactcggcagaagggaactgagagggcattcacaggggaatact 358 |||| ||||||||||| |||||||||||||| ||||| || ||||| || |||||||||| Sbjct: 321 aagagcagtattatgttactcggcagaagggcactgaaagagcatttactggggaatact 380 Query: 359 ggaacactaaaaccccaggcgtctaccactgcatctgctgtgacacccctctgtttgagt 418 |||| ||||||||||||||| | || || || ||||||| ||||||||||||||| ||| Sbjct: 381 ggaatactaaaaccccaggcatttatcagtgtgtctgctgcgacacccctctgtttcagt 440 Query: 419 catctaccaagtttgatagtggtactggatggccgtcctattatcagccggttggcgaca 478 |||| ||||| ||||||||||||||||| ||||| ||||||||| | || |||| || | Sbjct: 441 catcaaccaaatttgatagtggtactgggtggccatcctattataaaccaattggtgaaa 500 Query: 479 atgtgaaaagcaagcttgatatgtcaatcttcttcatgcctcggaccgagtccctgtgcg 538 |||| || ||||||||||||||||||||| ||||| ||||||||| || || | Sbjct: 501 atgtcaagagcaagcttgatatgtcaatcannnnnatgccccggaccgaggtgctctgtg 560 Query: 539 ctgtctgcgacgctcatctcgggcatgttttcgacgacgggcctccgccgacgggaaaga 598 | ||| || |||||||| |||||||| ||||| |||||||| || || || || |||| Sbjct: 561 caacctgtgatgctcatctggggcatgtcttcgatgacgggccaccaccaacagggaaga 620 Query: 599 gatattgcatcaa 611 |||| || ||||| Sbjct: 621 gatactgtatcaa 633 Score = 44.1 bits (22), Expect = 0.78 Identities = 25/26 (96%) Strand = Plus / Plus Query: 194 gcgccatgggcgccgcgccgtcgtcg 219 ||||||||||| |||||||||||||| Sbjct: 198 gcgccatgggctccgcgccgtcgtcg 223
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 117 bits (59), Expect = 6e-23 Identities = 125/147 (85%) Strand = Plus / Minus Query: 417 gtcatctaccaagtttgatagtggtactggatggccgtcctattatcagccggttggcga 476 |||||| ||||| ||||||||||||||||| |||||||| |||||||| || |||| || Sbjct: 15501553 gtcatcgaccaaatttgatagtggtactgggtggccgtcatattatcaacccattggaga 15501494 Query: 477 caatgtgaaaagcaagcttgatatgtcaatcttcttcatgcctcggaccgagtccctgtg 536 ||||| || |||||||||||||||| ||| | |||||||||||||| ||| ||||| Sbjct: 15501493 taatgtaaagtgcaagcttgatatgtccatcatattcatgcctcggactgaggtgctgtg 15501434 Query: 537 cgctgtctgcgacgctcatctcgggca 563 |||||||| ||||||||||| ||||| Sbjct: 15501433 tgctgtctgtgacgctcatctggggca 15501407 Score = 81.8 bits (41), Expect = 4e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 350 gggaatactggaacactaaaaccccaggcgtctaccactgcatctgctgtgacacccctc 409 |||||||||||||||| |||||||| ||| ||||||| || |||||||||||||||||| Sbjct: 15501761 gggaatactggaacaccaaaaccccgggcatctaccattgtgtctgctgtgacacccctc 15501702 Query: 410 tgtttgagt 418 | ||||||| Sbjct: 15501701 tttttgagt 15501693 Score = 75.8 bits (38), Expect = 2e-10 Identities = 62/70 (88%) Strand = Plus / Minus Query: 260 catctctgagtgatgaggagttgaagaagcgcctcacaaaagaacagtattatgtcactc 319 ||||||||| ||||||||||| || ||||||||| |||||||| |||||||| | |||| Sbjct: 15501938 catctctgactgatgaggagtggaggaagcgcctgacaaaagatcagtattacattactc 15501879 Query: 320 ggcagaaggg 329 |||||||||| Sbjct: 15501878 ggcagaaggg 15501869
>dbj|AP003545.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0613F06 Length = 184289 Score = 117 bits (59), Expect = 6e-23 Identities = 125/147 (85%) Strand = Plus / Minus Query: 417 gtcatctaccaagtttgatagtggtactggatggccgtcctattatcagccggttggcga 476 |||||| ||||| ||||||||||||||||| |||||||| |||||||| || |||| || Sbjct: 169068 gtcatcgaccaaatttgatagtggtactgggtggccgtcatattatcaacccattggaga 169009 Query: 477 caatgtgaaaagcaagcttgatatgtcaatcttcttcatgcctcggaccgagtccctgtg 536 ||||| || |||||||||||||||| ||| | |||||||||||||| ||| ||||| Sbjct: 169008 taatgtaaagtgcaagcttgatatgtccatcatattcatgcctcggactgaggtgctgtg 168949 Query: 537 cgctgtctgcgacgctcatctcgggca 563 |||||||| ||||||||||| ||||| Sbjct: 168948 tgctgtctgtgacgctcatctggggca 168922 Score = 81.8 bits (41), Expect = 4e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 350 gggaatactggaacactaaaaccccaggcgtctaccactgcatctgctgtgacacccctc 409 |||||||||||||||| |||||||| ||| ||||||| || |||||||||||||||||| Sbjct: 169276 gggaatactggaacaccaaaaccccgggcatctaccattgtgtctgctgtgacacccctc 169217 Query: 410 tgtttgagt 418 | ||||||| Sbjct: 169216 tttttgagt 169208 Score = 75.8 bits (38), Expect = 2e-10 Identities = 62/70 (88%) Strand = Plus / Minus Query: 260 catctctgagtgatgaggagttgaagaagcgcctcacaaaagaacagtattatgtcactc 319 ||||||||| ||||||||||| || ||||||||| |||||||| |||||||| | |||| Sbjct: 169453 catctctgactgatgaggagtggaggaagcgcctgacaaaagatcagtattacattactc 169394 Query: 320 ggcagaaggg 329 |||||||||| Sbjct: 169393 ggcagaaggg 169384
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 54.0 bits (27), Expect = 8e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 543 ctgcgacgctcatctcgggcatgttttcgacgacgggcc 581 ||||||||| ||||||||||| || |||||||||||||| Sbjct: 4524016 ctgcgacgcccatctcgggcacgtcttcgacgacgggcc 4524054
>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome Length = 3184243 Score = 52.0 bits (26), Expect = 0.003 Identities = 26/26 (100%) Strand = Plus / Plus Query: 338 gggcattcacaggggaatactggaac 363 |||||||||||||||||||||||||| Sbjct: 2408046 gggcattcacaggggaatactggaac 2408071
>gb|AC148877.2| Chlamydomonas reinhardtii clone cr-11B1, complete sequence Length = 52591 Score = 50.1 bits (25), Expect = 0.013 Identities = 32/33 (96%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 100 tcctcctacctcccgcccct-cctcccctccgc 131 |||||||||||||||||||| |||||||||||| Sbjct: 34483 tcctcctacctcccgcccctccctcccctccgc 34515
>gb|AC151604.2| Emiliania huxleyi clone JGIACCU-13A1, complete sequence Length = 36530 Score = 48.1 bits (24), Expect = 0.050 Identities = 24/24 (100%) Strand = Plus / Plus Query: 108 cctcccgcccctcctcccctccgc 131 |||||||||||||||||||||||| Sbjct: 15797 cctcccgcccctcctcccctccgc 15820
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 48.1 bits (24), Expect = 0.050 Identities = 24/24 (100%) Strand = Plus / Minus Query: 375 aggcgtctaccactgcatctgctg 398 |||||||||||||||||||||||| Sbjct: 4174671 aggcgtctaccactgcatctgctg 4174648
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Minus Query: 376 ggcgtctaccactgcatctgctg 398 ||||||||||||||||||||||| Sbjct: 4511379 ggcgtctaccactgcatctgctg 4511357
>gb|CP000481.1| Acidothermus cellulolyticus 11B, complete genome Length = 2443540 Score = 44.1 bits (22), Expect = 0.78 Identities = 25/26 (96%) Strand = Plus / Minus Query: 209 cgccgtcgtcgccctcgccgtccgga 234 ||||||||||||| |||||||||||| Sbjct: 2164837 cgccgtcgtcgccgtcgccgtccgga 2164812
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 44.1 bits (22), Expect = 0.78 Identities = 25/26 (96%) Strand = Plus / Plus Query: 427 aagtttgatagtggtactggatggcc 452 |||| ||||||||||||||||||||| Sbjct: 18050 aagtatgatagtggtactggatggcc 18075
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 44.1 bits (22), Expect = 0.78 Identities = 22/22 (100%) Strand = Plus / Minus Query: 209 cgccgtcgtcgccctcgccgtc 230 |||||||||||||||||||||| Sbjct: 938721 cgccgtcgtcgccctcgccgtc 938700
>dbj|AB191243.1| Homo sapiens DNA, transposon SVA sequence Length = 463567 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 161 gcggcggcagcagttacaggc 181 ||||||||||||||||||||| Sbjct: 355107 gcggcggcagcagttacaggc 355087
>ref|XM_001137698.1| PREDICTED: Pan troglodytes similar to UDP-N-acetylglucosaminyltransferase (LOC736386), mRNA Length = 755 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 161 gcggcggcagcagttacaggc 181 ||||||||||||||||||||| Sbjct: 114 gcggcggcagcagttacaggc 94
>ref|XR_011180.1| PREDICTED: Macaca mulatta similar to O-linked GlcNAc transferase isoform 1 (LOC698268), mRNA Length = 3917 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 161 gcggcggcagcagttacaggc 181 ||||||||||||||||||||| Sbjct: 114 gcggcggcagcagttacaggc 94
>ref|NM_104245.2| Arabidopsis thaliana unknown protein (AT1G53670) mRNA, complete cds Length = 749 Score = 42.1 bits (21), Expect = 3.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 400 gacacccctctgtttgagtcatctaccaagtttgatagtgg 440 ||||| ||||| ||||| ||||| || |||||||||||||| Sbjct: 363 gacacacctctatttgattcatcaacaaagtttgatagtgg 403
>gb|AC116136.9| Mus musculus chromosome 5, clone RP23-116G17, complete sequence Length = 212184 Score = 42.1 bits (21), Expect = 3.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 101 cctcctacctcccgcccctcctcccctcc 129 |||||| |||||| ||||||||||||||| Sbjct: 172772 cctcctccctccctcccctcctcccctcc 172800
>gb|BC073955.1| Homo sapiens cDNA clone IMAGE:5756190, partial cds Length = 1660 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 161 gcggcggcagcagttacaggc 181 ||||||||||||||||||||| Sbjct: 55 gcggcggcagcagttacaggc 35
>gb|AC165155.2| Mus musculus BAC clone RP23-293N22 from chromosome 14, complete sequence Length = 226292 Score = 42.1 bits (21), Expect = 3.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 100 tcctcctacctcccgcccctcctcccctc 128 ||||||| |||||| |||||||||||||| Sbjct: 59020 tcctcctccctccctcccctcctcccctc 58992
>gb|AC165272.2| Mus musculus BAC clone RP24-296O4 from chromosome 14, complete sequence Length = 178348 Score = 42.1 bits (21), Expect = 3.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 100 tcctcctacctcccgcccctcctcccctc 128 ||||||| |||||| |||||||||||||| Sbjct: 38547 tcctcctccctccctcccctcctcccctc 38575
>gb|BC014434.1| Homo sapiens O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N- acetylglucosaminyl transferase), mRNA (cDNA clone MGC:22921 IMAGE:4865031), complete cds Length = 3327 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 161 gcggcggcagcagttacaggc 181 ||||||||||||||||||||| Sbjct: 45 gcggcggcagcagttacaggc 25
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 42.1 bits (21), Expect = 3.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 553 catctcgggcatgttttcgacgacgggcctccgccgacggg 593 |||||||| ||||| ||||||||||| || ||||| ||||| Sbjct: 231377 catctcggacatgtgttcgacgacggtccgccgcccacggg 231417
>ref|XM_809948.1| Trypanosoma cruzi strain CL Brener short-chain dehydrogenase (Tc00.1047053506337.4) partial mRNA Length = 624 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 680 cgcgccgcatgcaaattttcg 700 ||||||||||||||||||||| Sbjct: 236 cgcgccgcatgcaaattttcg 216
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 206 ccgcgccgtcgtcgccctcgccgtc 230 |||||||||||||||| |||||||| Sbjct: 23119981 ccgcgccgtcgtcgccgtcgccgtc 23120005
>emb|AL360011.19| Human DNA sequence from clone RP11-103A2 on chromosome 10 Contains the HTR7 gene for 5-hydroxytryptamine receptor 7 (adenylate cyclase-coupled) and a CpG island, complete sequence Length = 157636 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 647 tccctggaagaagaatcaaga 667 ||||||||||||||||||||| Sbjct: 120943 tccctggaagaagaatcaaga 120963
>gb|AY087664.1| Arabidopsis thaliana clone 3748 mRNA, complete sequence Length = 673 Score = 42.1 bits (21), Expect = 3.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 400 gacacccctctgtttgagtcatctaccaagtttgatagtgg 440 ||||| ||||| ||||| ||||| || |||||||||||||| Sbjct: 342 gacacacctctatttgattcatcaacaaagtttgatagtgg 382
>emb|BX537844.1|HSM805941 Homo sapiens mRNA; cDNA DKFZp686C1753 (from clone DKFZp686C1753); complete cds Length = 5452 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 161 gcggcggcagcagttacaggc 181 ||||||||||||||||||||| Sbjct: 72 gcggcggcagcagttacaggc 52
>emb|AL833085.2|HSM804396 Homo sapiens mRNA; cDNA DKFZp451K0919 (from clone DKFZp451K0919); complete cds Length = 5478 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 161 gcggcggcagcagttacaggc 181 ||||||||||||||||||||| Sbjct: 94 gcggcggcagcagttacaggc 74
>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29 Length = 308050 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 cgcgccgtcgtcgccctcgcc 227 ||||||||||||||||||||| Sbjct: 13814 cgcgccgtcgtcgccctcgcc 13834
>emb|AJ315767.1|HSA315767 Homo sapiens OGT gene for O-linked N-acetylglucosamine (GlcNAc) transferase, splice variants 1-3 Length = 42790 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 161 gcggcggcagcagttacaggc 181 ||||||||||||||||||||| Sbjct: 72 gcggcggcagcagttacaggc 52
>emb|BX908396.13| Zebrafish DNA sequence from clone CH211-267G5 in linkage group 18, complete sequence Length = 149493 Score = 42.1 bits (21), Expect = 3.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 690 gcaaattttcgttttggtatgaactattt 718 |||||||||| |||||| ||||||||||| Sbjct: 47629 gcaaattttcattttgggatgaactattt 47657
>emb|CR858269.1| Pongo pygmaeus mRNA; cDNA DKFZp469N0710 (from clone DKFZp469N0710) Length = 5460 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 161 gcggcggcagcagttacaggc 181 ||||||||||||||||||||| Sbjct: 72 gcggcggcagcagttacaggc 52
>dbj|AP006063.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0022O06 Length = 180769 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 204 cgccgcgccgtcgtcgccctcgccg 228 |||||||||||||||||| |||||| Sbjct: 48623 cgccgcgccgtcgtcgccatcgccg 48599
>dbj|AP003048.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0710A02 Length = 157201 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 206 ccgcgccgtcgtcgccctcgccgtc 230 |||||||||||||||| |||||||| Sbjct: 52140 ccgcgccgtcgtcgccgtcgccgtc 52164
>dbj|AK117314.1| Arabidopsis thaliana At1g53670 mRNA for putative transcriptional regulator, complete cds, clone: RAFL16-88-B20 Length = 723 Score = 42.1 bits (21), Expect = 3.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 400 gacacccctctgtttgagtcatctaccaagtttgatagtgg 440 ||||| ||||| ||||| ||||| || |||||||||||||| Sbjct: 337 gacacacctctatttgattcatcaacaaagtttgatagtgg 377
>dbj|AK026724.1| Homo sapiens cDNA: FLJ23071 fis, clone LNG05694 Length = 1958 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 161 gcggcggcagcagttacaggc 181 ||||||||||||||||||||| Sbjct: 72 gcggcggcagcagttacaggc 52
>emb|BX818395.1|CNS0AE53 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL76ZH06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 737 Score = 42.1 bits (21), Expect = 3.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 400 gacacccctctgtttgagtcatctaccaagtttgatagtgg 440 ||||| ||||| ||||| ||||| || |||||||||||||| Sbjct: 355 gacacacctctatttgattcatcaacaaagtttgatagtgg 395
>emb|AL590763.2|HSXDPB Homo sapiens chromosome X sequence from 6 PACs 1 BAC and 1 cosmid, region GJB1-DXS559 map Xq13.1, complete sequence Length = 248968 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 161 gcggcggcagcagttacaggc 181 ||||||||||||||||||||| Sbjct: 74751 gcggcggcagcagttacaggc 74731
>ref|NM_181672.1| Homo sapiens O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N- acetylglucosaminyl transferase) (OGT), transcript variant 1, mRNA Length = 5475 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 161 gcggcggcagcagttacaggc 181 ||||||||||||||||||||| Sbjct: 93 gcggcggcagcagttacaggc 73
>ref|NM_181673.1| Homo sapiens O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N- acetylglucosaminyl transferase) (OGT), transcript variant 2, mRNA Length = 5445 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 161 gcggcggcagcagttacaggc 181 ||||||||||||||||||||| Sbjct: 93 gcggcggcagcagttacaggc 73
>gb|AC120353.9| Mus musculus chromosome 5, clone RP24-239E2, complete sequence Length = 182659 Score = 42.1 bits (21), Expect = 3.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 101 cctcctacctcccgcccctcctcccctcc 129 |||||| |||||| ||||||||||||||| Sbjct: 17249 cctcctccctccctcccctcctcccctcc 17277
>gb|BC038180.1| Homo sapiens O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N- acetylglucosaminyl transferase), mRNA (cDNA clone MGC:39117 IMAGE:5017795), complete cds Length = 3920 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 161 gcggcggcagcagttacaggc 181 ||||||||||||||||||||| Sbjct: 47 gcggcggcagcagttacaggc 27
>emb|CR974582.5| Mouse DNA sequence from clone RP23-84L8 on chromosome 12, complete sequence Length = 165056 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 109 ctcccgcccctcctcccctcc 129 ||||||||||||||||||||| Sbjct: 111893 ctcccgcccctcctcccctcc 111913 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 128,188,044 Number of extensions: 6717301 Number of successful extensions: 136035 Number of sequences better than 10.0: 48 Number of HSP's gapped: 136033 Number of HSP's successfully gapped: 56 Length of query: 816 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 794 Effective length of database: 18,508,616,841 Effective search space: 14695841771754 Effective search space used: 14695841771754 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)