ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf30j23
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK061232:Os11g0150300 32 0.26
2Os03g0796100:Os03g0796100 30 0.76
3Os02g0157700:Os02g0157700 30 0.76
4AK110380: 29 2.2
5AK106687:Os06g0713300 29 2.2
6AK070772:Os02g0825600 28 3.8
7Os02g0702000:Os02g0702000 28 5.0
8AK101457:Os01g0708100 27 6.4
9AK111336:Os07g0614300 27 6.5

>AK061232:Os11g0150300 |
          Length = 100
 Score = 32.0 bits (71), Expect = 0.26
 Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
 Frame = +3

Query: 219 QRTQMLLMSIISDITRDITRQMDTQK-DMATTLQRRELMQRELPKRDLEITD 371
           +R   LL+S+++ + R I R  + Q+ DM+  L +  L+Q  LP    EITD
Sbjct: 41  ERAGELLVSLVAHVGRQIFRAREGQREDMSEALCQHLLVQHILPPEKKEITD 92



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>Os03g0796100:Os03g0796100 |
          Length = 501

 Score = 30.4 bits (67), Expect = 0.76
 Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
 Frame = +3

Query: 237 LMSIISDITRDITRQMDTQKDMATT-LQRR-ELMQRELPKRDLEITDL 374
           L ++  D+   I R++DT+  +AT  L RR   + RELP  D  +TDL
Sbjct: 21  LSALPDDLLHLILRRLDTRDALATAALSRRWAAVPRELPALDFRVTDL 68



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>Os02g0157700:Os02g0157700 |
          Length = 628

 Score = 30.4 bits (67), Expect = 0.76
 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
 Frame = +3

Query: 198 DMGQDMVQR---TQMLLMSIISDITRDITRQMDTQKDMATTLQRRELMQRELPKRDLE 362
           D GQD +Q+   + +   SII+ I    +   D   ++  T+Q+RE+ Q+ L   DLE
Sbjct: 63  DAGQDRLQKVPVSNIRNFSIIAHIDHGKSTLADKLLELTGTVQKREMKQQFLDNMDLE 120



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>AK110380: |
          Length = 842

 Score = 28.9 bits (63), Expect = 2.2
 Identities = 17/94 (18%), Positives = 41/94 (43%)
 Frame = +3

Query: 180 TDSEKRDMGQDMVQRTQMLLMSIISDITRDITRQMDTQKDMATTLQRRELMQRELPKRDL 359
           +++  R +   ++Q  Q++  S + +  RD+ R++    + A   +    M R +P   +
Sbjct: 16  SNAASRSLDGALLQHLQVVARSTVGN--RDVARELTQAINFAADWRVAVSMVRHVPSEVV 73

Query: 360 EITDLENWVVLVEKASAEKEKDTVSFNYLVTASI 461
               L +W+    K +A +     S   + +A +
Sbjct: 74  PSATLSHWLAAAVKCTARRADWVASLRVVASARV 107



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>AK106687:Os06g0713300 |
          Length = 64

 Score = 28.9 bits (63), Expect = 2.2
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +1

Query: 79  LHLLRSCCLYRARFICCYRCCFSC 150
           L+   SCCLY     CC  CC +C
Sbjct: 43  LYCCSSCCLY-----CCSSCCLNC 61



 Score = 28.1 bits (61), Expect = 3.8
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = +1

Query: 79  LHLLRSCCLYRARFICCYRCCFSC 150
           L+   SCCLY     CC  CC SC
Sbjct: 35  LNCCSSCCLYCCS-SCCLYCCSSC 57



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>AK070772:Os02g0825600 |
          Length = 90

 Score = 28.1 bits (61), Expect = 3.8
 Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
 Frame = -1

Query: 397 STKTTQFSKSVISKSLFGSSLCI------NSLLCNVVAISFCVSICLVISLVISEIIDIS 236
           S  + +F+KS +  S+ G   CI      + L  NV+ I+FC+    ++SL   +   I 
Sbjct: 4   SALSVEFTKSQVVTSIPGFFFCIWYSAKKHWLANNVLGIAFCIQGIEMLSLGSFKTGAIL 63

Query: 235 SICVLCT 215
            + V+CT
Sbjct: 64  LVWVVCT 70



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>Os02g0702000:Os02g0702000 |
          Length = 820

 Score = 27.7 bits (60), Expect = 5.0
 Identities = 22/58 (37%), Positives = 27/58 (46%)
 Frame = -1

Query: 379 FSKSVISKSLFGSSLCINSLLCNVVAISFCVSICLVISLVISEIIDISSICVLCTISC 206
           FSK V S SL  +     +LLC+  +I  C SI L  S   S  ID    C +   SC
Sbjct: 708 FSKVVRSSSLRSALASSLTLLCSSRSIHACSSISLSRS---SACIDCLHCCSMAARSC 762



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>AK101457:Os01g0708100 |
          Length = 437

 Score = 27.3 bits (59), Expect = 6.4
 Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 9/74 (12%)
 Frame = +3

Query: 276 RQMDTQKDMATTLQRRELMQRELPKRDLEITDLENWVV---------LVEKASAEKEKDT 428
           RQM+ +   A T   R  + + +   D +  D+E+W++         LVE     +  D 
Sbjct: 278 RQMELRDVAAVTRLLRAYLAKFVVAPDFDEMDVEHWLLPREDVVDSYLVESPETHEVTDF 337

Query: 429 VSFNYLVTASILQN 470
            SF Y + +S+L N
Sbjct: 338 CSF-YTLPSSVLNN 350



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>AK111336:Os07g0614300 |
          Length = 342

 Score = 27.3 bits (59), Expect = 6.5
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +1

Query: 43  FSDFETVFQYEALHLLRSCCLYRARFICCYRCCFSC 150
           F D + +  +E L+    CC   A  +CC  C  +C
Sbjct: 271 FGDVKPLETFEILNKAAGCCSRLADCLCCMCCIKAC 306


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 11,873,343
Number of extensions: 220391
Number of successful extensions: 708
Number of sequences better than 10.0: 9
Number of HSP's gapped: 703
Number of HSP's successfully gapped: 10
Length of query: 179
Length of database: 15,399,855
Length adjustment: 94
Effective length of query: 85
Effective length of database: 11,636,001
Effective search space: 989060085
Effective search space used: 989060085
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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