ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf30j17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK073242:Os09g0551300 25 9.5
2AK066732:Os09g0551300 25 9.5

>AK073242:Os09g0551300 |
          Length = 665
 Score = 25.4 bits (54), Expect = 9.5
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 146 SNPVRGNEELHYALDWPCSEKKQP 75
           + P  G +E H   + P SEKKQP
Sbjct: 626 NGPGSGKKETHNEKEEPTSEKKQP 649



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>AK066732:Os09g0551300 |
          Length = 699

 Score = 25.4 bits (54), Expect = 9.5
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 146 SNPVRGNEELHYALDWPCSEKKQP 75
           + P  G +E H   + P SEKKQP
Sbjct: 626 NGPGSGKKETHNEKEEPTSEKKQP 649


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 3,720,422
Number of extensions: 51096
Number of successful extensions: 143
Number of sequences better than 10.0: 2
Number of HSP's gapped: 143
Number of HSP's successfully gapped: 2
Length of query: 87
Length of database: 15,399,855
Length adjustment: 58
Effective length of query: 29
Effective length of database: 13,077,477
Effective search space: 379246833
Effective search space used: 379246833
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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