ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf33g24
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|X65875.1|HVITR1 H.vulgare Itr1 gene 1059 0.0
2emb|X17302.1|HVCME2 H.vulgare RNA for trypsin inhibitor CMe 1011 0.0
3emb|AJ222978.1|HVAJ2978 Hordeum vulgare Itr1 gene for BTI-CMe3.1... 952 0.0
4emb|AJ222977.1|HVAJ2977 Hordeum vulgare Itr1 gene for BTI-CMe1 p... 888 0.0
5emb|AJ251931.1|HVU251931 Hordeum vulgare itr1 gene for BTI-CMe2.1 848 0.0
6emb|X98593.1|HVITR11 H.vulgare itr1.1 gene 842 0.0
7emb|AJ222974.1|HSAJ2974 Hordeum spontaneum Itr1 gene for BTI-CMe... 817 0.0
8emb|AJ222976.1|HSAJ2976 Hordeum spontaneum Itr1 gene for BTI-CMe... 702 0.0
9emb|AJ222975.1|HSAJ2975 Hordeum spontaneum Itr1 gene for BTI-CMe... 638 e-180
10emb|AJ223458.1|HVAJ3458 Hordeum vulgare Itr1 gene for BTI-CMe2.2... 622 e-175
11emb|X98594.1|HVITR12 H.vulgare itr1.2 gene 601 e-168
12emb|X75610.1|TACMX3 T.aestivum Itrl-3 mRNA for CMx 56 2e-04
13emb|X75609.1|YACMX2 T.aestivum Itrl-2 mRNA for CMx 56 2e-04
14emb|X75608.1|TACMX1 T.aestivum Itrl-1 mRNA for CMx 56 2e-04
15gb|AC190220.1| Pan troglodytes chromosome 7 clone CH251-385D13, ... 44 0.59
16gb|AC006970.6| Homo sapiens PAC clone RP4-725G10 from 7, complet... 44 0.59
17gb|AC150749.3| Pan troglodytes BAC clone CH251-553P23 from chrom... 44 0.59
18dbj|AB025630.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 42 2.3
19emb|CT835557.1| Oryza sativa (indica cultivar-group) cDNA clone:... 40 9.2
20emb|CT835556.1| Oryza sativa (indica cultivar-group) cDNA clone:... 40 9.2
21ref|NM_001073046.1| Oryza sativa (japonica cultivar-group) Os12g... 40 9.2
22gb|CP000431.1| Rhodococcus sp. RHA1, complete genome 40 9.2
23emb|CR812482.14| Zebrafish DNA sequence from clone CH211-157N19 ... 40 9.2
24gb|CP000032.1| Silicibacter pomeroyi DSS-3 plasmid megaplasmid, ... 40 9.2
25gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome 40 9.2
26gb|AF106583.1| Caenorhabditis elegans cosmid F23C8, complete seq... 40 9.2
27gb|AC135079.9| Mus musculus chromosome 15, clone RP24-439P7, com... 40 9.2
28gb|AY450285.1| Pseudomonas putida NCIMB 10007 plasmid CAM CamP (... 40 9.2
29gb|AC101882.14| Mus musculus chromosome 10, clone RP23-394M6, co... 40 9.2
30dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
31emb|AL136442.12| Human DNA sequence from clone RP11-25J23 on chr... 40 9.2
32emb|BX901898.15| Zebrafish DNA sequence from clone DKEY-148E3 in... 40 9.2
33gb|AC018843.4|AC018843 Homo sapiens chromosome 3 clone RP11-900O... 40 9.2
34dbj|AP006240.1| Homo sapiens genomic DNA, chromosome 3, clone:RP... 40 9.2
35emb|AL954154.5|CNS08CCS Oryza sativa chromosome 12, . BAC OSJNBb... 40 9.2
36gb|AC034198.7| Homo sapiens chromosome 3 clone RP11-767C1 map 3p... 40 9.2
37gb|AC018836.5| Homo sapiens chromosome 3 clone RP11-588P9 map 3p... 40 9.2
38dbj|AP000494.1| Homo sapiens genomic DNA, chromosome 3p21.3, clo... 40 9.2

>emb|X65875.1|HVITR1 H.vulgare Itr1 gene
          Length = 5463
 Score = 1059 bits (534), Expect = 0.0
 Identities = 585/602 (97%)
 Strand = Plus / Plus

                                                                        
Query: 5    ccaacaacatcccttctaaacgaaaacaatggcgttcaagtaccagctcatcctctcggc 64
            |||||||||||||||| |   || ||||||||||||||||||||||||| |||| |||||
Sbjct: 2366 ccaacaacatcccttcaatttgataacaatggcgttcaagtaccagctcctcctgtcggc 2425

                                                                        
Query: 65   cgccgtcatgctcgccattctcgtcgccactgccaccagtttcggggattcgtgtgctcc 124
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2426 cgccgtcatgctcgccattctcgtcgccactgccaccagtttcggggattcgtgtgctcc 2485

                                                                        
Query: 125  aggggatgcgttgccacacaaccctctcagagcctgccgcacctacgtggtcagtcaaat 184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2486 aggggatgcgttgccacacaaccctctcagagcctgccgcacctacgtggtcagtcaaat 2545

                                                                        
Query: 185  ctgccaccaaggccccagactcctcacctcggacatgaagaggcggtattgcgacgagtt 244
            ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct: 2546 ctgccaccaaggccccagactcctcacctcggacatgaagaggcggtgttgcgacgagct 2605

                                                                        
Query: 245  gtcggccatcccggcgtactgcaggtgcgaagcgctgcgtatcatcatgcaaggggtagt 304
            ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 2606 gtcggccatcccggcgtactgtaggtgcgaagcgctgcgtatcatcatgcaaggggtagt 2665

                                                                        
Query: 305  aacttggcagggtgcgttcgagggtgcctacttcaaggacacgcccaactgccctaggga 364
            |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 2666 aacttggcagggtgcgttcgagggtgcctacttcaaggactcgcccaactgccctaggga 2725

                                                                        
Query: 365  gaggcaaacgagctacgccgccaacctcgtcaccccgcaggagtgcaacctatggaccat 424
            |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 2726 gaggcaaacgagctacgccgccaacctcgtcaccccgcaggagtgcaacctagggaccat 2785

                                                                        
Query: 425  ccacggcagcccgtcctgccccgaactgcagcccggatatggagtggtctcgtcataagt 484
            |||||||||| ||| ||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 2786 ccacggcagcgcgtactgccccgaactgcagcccggatatggagtggtcttgtaataagt 2845

                                                                        
Query: 485  tataacgactagctcgatcatgaataagcatggtgcatcgatcaatggaccaatcgattg 544
            | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2846 tctaacgactagctcgatcatgaataagcatggtgcatcgatcaatggaccaatcgattg 2905

                                                                        
Query: 545  tatgcatctatgcccatgtgtgatgtgtgttaaatcgtaataaagagcatcagagtattt 604
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2906 tatgcatctatgcccatgtgtgatgtgtgttaaatcgtaataaagagcatcagagtattt 2965

              
Query: 605  tc 606
            ||
Sbjct: 2966 tc 2967



 Score =  432 bits (218), Expect = e-118
 Identities = 391/444 (88%), Gaps = 10/444 (2%)
 Strand = Plus / Plus

                                                                        
Query: 138  ccacacaaccctctcagagcctgccgcacctacgtggtcagtcaaatctgccaccaaggc 197
            ||||||||||||||| | |||||||||||||||||||||||||||||||||||  |||||
Sbjct: 4814 ccacacaaccctctcgg-gcctgccgcacctacgtggtcagtcaaatctgccatgaaggc 4872

                                                                        
Query: 198  cccagactcctcacctcggacatgaagaggcggtattgcgacgagttgtcggccatcccg 257
            |  |||||| |||||| |||||||||||||||||  ||||||||| ||||||||||||||
Sbjct: 4873 cg-agactcttcacctgggacatgaagaggcggtgctgcgacgagctgtcggccatcccg 4931

                                                                        
Query: 258  gcgtactgcaggtgcgaagcgctgcgtatcatcatgcaaggggtagtaacttggcagggt 317
             |||||||||||||||||||||||||| |||||||| | ||||||||| ||  ||| |||
Sbjct: 4932 tcgtactgcaggtgcgaagcgctgcgtgtcatcatggatggggtagtacctccgcacggt 4991

                                                                        
Query: 318  gcgttcgagggtgcctacttcaaggacacgcccaactgccctagggagaggcaaacgagc 377
            | ||||||||||||||||||| | |||| ||||||||||||||||| || ||||| ||||
Sbjct: 4992 gtgttcgagggtgcctacttccaagacatgcccaactgccctagggtgacgcaaaggagc 5051

                                                                        
Query: 378  tacgccgccaacctcgtcaccccgcaggagtgcaacctatggaccatccacggcagcccg 437
            |||||||||||||||||| ||| ||||||||||||||||  ||| || || |||||||||
Sbjct: 5052 tacgccgccaacctcgtcncccggcaggagtgcaacctagagacaatacatggcagcccg 5111

                                                                        
Query: 438  tcctgccccgaactgcagcccggatatggagtggtctcgtcataagttataacgactagc 497
            | |||||||||||||||||||||||||||||||  ||||   ||| || ||   ||||||
Sbjct: 5112 tactgccccgaactgcagcccggatatggagtgccctcg---taatttcta---actagc 5165

                                                                        
Query: 498  tcgatcatgaataagcatggtgcatcgatcaatggaccaatcgattgtatgcatctatgc 557
            |||||| ||||||||||||||||||||||| |||||  ||||| |||||||||| |||||
Sbjct: 5166 tcgatcgtgaataagcatggtgcatcgatcgatggatgaatcgcttgtatgcatttatgc 5225

                                    
Query: 558  cc--atgtgtgatgtgtgttaaat 579
            ||  |||||||||||| |||||||
Sbjct: 5226 ccatatgtgtgatgtgcgttaaat 5249



to top

>emb|X17302.1|HVCME2 H.vulgare RNA for trypsin inhibitor CMe
          Length = 582

 Score = 1011 bits (510), Expect = 0.0
 Identities = 562/578 (97%), Gaps = 1/578 (0%)
 Strand = Plus / Plus

                                                                       
Query: 29  aacaatggcgttcaagtaccagctcatcctctcggccgccgtcatgctcgccattctcgt 88
           ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 6   aacaatggcgttcaagtaccagctcctcctgtcggccgccgtcatgctcgccattctcgt 65

                                                                       
Query: 89  cgccactgccaccagtttcggggattcgtgtgctccaggggatgcgttgccacacaaccc 148
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66  cgccactgccaccagtttcggggattcgtgtgctccaggggatgcgttgccacacaaccc 125

                                                                       
Query: 149 tctcagagcctgccgcacctacgtggtcagtcaaatctgccaccaaggccccagactcct 208
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 tctcagagcctgccgcacctacgtggtcagtcaaatctgccaccaaggccccagactcct 185

                                                                       
Query: 209 cacctcggacatgaagaggcggtattgcgacgagttgtcggccatcccggcgtactgcag 268
           ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||
Sbjct: 186 cacctcggacatgaagaggcggtgttgcgacgagctgtcggccatcccggcgtactgtag 245

                                                                       
Query: 269 gtgcgaagcgctgcgtatcatcatgcaaggggtagtaacttggcagggtgcgttcgaggg 328
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 gtgcgaagcgctgcgtatcatcatgcaaggggtagtaacttggcagggtgcgttcgaggg 305

                                                                       
Query: 329 tgcctacttcaaggacacgcccaactgccctagggagaggcaaacgagctacgccgccaa 388
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 tgcctacttcaaggactcgcccaactgccctagggagaggcaaacgagctacgccgccaa 365

                                                                       
Query: 389 cctcgtcaccccgcaggagtgcaacctatggaccatccacggcagcccgtcctgccccga 448
           |||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||
Sbjct: 366 cctcgtcaccccgcaggagtgcaacctagggaccatccacggcagcgcgtactgccccga 425

                                                                       
Query: 449 actgcagcccggatatggagtggtctcgtcataagttataacgactagctcgatcatgaa 508
           ||||||||||| |||| ||||||||| || ||||||| ||||||||| ||||||||||||
Sbjct: 426 actgcagcccgcatattgagtggtcttgtaataagttctaacgactacctcgatcatgaa 485

                                                                       
Query: 509 taagcatggtgcatcgatcaatggaccaatcgattgtatgcatctatgcccatgtgtgat 568
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 taagcatggtgcatcgatc-atggaccaatcgattgtatgcatctatgcccatgtgtgat 544

                                                 
Query: 569 gtgtgttaaatcgtaataaagagcatcagagtattttc 606
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 545 gtgtgttaaatcgtaataaagagcatcagagtattttc 582



to top

>emb|AJ222978.1|HVAJ2978 Hordeum vulgare Itr1 gene for BTI-CMe3.1 protein
          Length = 484

 Score =  952 bits (480), Expect = 0.0
 Identities = 483/484 (99%)
 Strand = Plus / Plus

                                                                       
Query: 33  atggcgttcaagtaccagctcatcctctcggccgccgtcatgctcgccattctcgtcgcc 92
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atggcgttcaagtaccagctcatcctctcggccgccgtcatgctcgccattctcgtcgcc 60

                                                                       
Query: 93  actgccaccagtttcggggattcgtgtgctccaggggatgcgttgccacacaaccctctc 152
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  actgccaccagtttcggggattcgtgtgctccaggggatgcgttgccacacaaccctctc 120

                                                                       
Query: 153 agagcctgccgcacctacgtggtcagtcaaatctgccaccaaggccccagactcctcacc 212
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agagcctgccgcacctacgtggtcagtcaaatctgccaccaaggccccagactcctcacc 180

                                                                       
Query: 213 tcggacatgaagaggcggtattgcgacgagttgtcggccatcccggcgtactgcaggtgc 272
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcggacatgaagaggcggtgttgcgacgagttgtcggccatcccggcgtactgcaggtgc 240

                                                                       
Query: 273 gaagcgctgcgtatcatcatgcaaggggtagtaacttggcagggtgcgttcgagggtgcc 332
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaagcgctgcgtatcatcatgcaaggggtagtaacttggcagggtgcgttcgagggtgcc 300

                                                                       
Query: 333 tacttcaaggacacgcccaactgccctagggagaggcaaacgagctacgccgccaacctc 392
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tacttcaaggacacgcccaactgccctagggagaggcaaacgagctacgccgccaacctc 360

                                                                       
Query: 393 gtcaccccgcaggagtgcaacctatggaccatccacggcagcccgtcctgccccgaactg 452
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtcaccccgcaggagtgcaacctatggaccatccacggcagcccgtcctgccccgaactg 420

                                                                       
Query: 453 cagcccggatatggagtggtctcgtcataagttataacgactagctcgatcatgaataag 512
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cagcccggatatggagtggtctcgtcataagttataacgactagctcgatcatgaataag 480

               
Query: 513 catg 516
           ||||
Sbjct: 481 catg 484



to top

>emb|AJ222977.1|HVAJ2977 Hordeum vulgare Itr1 gene for BTI-CMe1 protein
          Length = 484

 Score =  888 bits (448), Expect = 0.0
 Identities = 475/484 (98%)
 Strand = Plus / Plus

                                                                       
Query: 33  atggcgttcaagtaccagctcatcctctcggccgccgtcatgctcgccattctcgtcgcc 92
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atggcgttcaagtaccagctcatcctctcggccgccgtcatgctcgccattctcgtcgcc 60

                                                                       
Query: 93  actgccaccagtttcggggattcgtgtgctccaggggatgcgttgccacacaaccctctc 152
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  actgccaccagtttcggggattcgtgtgctccaggggatgcgttgccacacaaccctctc 120

                                                                       
Query: 153 agagcctgccgcacctacgtggtcagtcaaatctgccaccaaggccccagactcctcacc 212
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agagcctgccgcacctacgtggtcagtcaaatctgccaccaaggccccagactcctcacc 180

                                                                       
Query: 213 tcggacatgaagaggcggtattgcgacgagttgtcggccatcccggcgtactgcaggtgc 272
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcggacatgaagaggcggtgttgcgacgagttgtcggccatcccggcgtactgcaggtgc 240

                                                                       
Query: 273 gaagcgctgcgtatcatcatgcaaggggtagtaacttggcagggtgcgttcgagggtgcc 332
           ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |
Sbjct: 241 gaagcgctgcgtatcatcatggaaggggtagtaacttggcagggtgcgttcgagggtcgc 300

                                                                       
Query: 333 tacttcaaggacacgcccaactgccctagggagaggcaaacgagctacgccgccaacctc 392
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tacttcaaggacacgcccaactgccctagggagaggcaaacgagctacgccgccaacctc 360

                                                                       
Query: 393 gtcaccccgcaggagtgcaacctatggaccatccacggcagcccgtcctgccccgaactg 452
           |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 361 gtcaccccgcaggagtgcaacctatggaccatccacggcagcgcgtactgccccgaactg 420

                                                                       
Query: 453 cagcccggatatggagtggtctcgtcataagttataacgactagctcgatcatgaataag 512
           |||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||
Sbjct: 421 cagcccggatatggagtggtcttgtaataagttctaacgactagctcgatcatgaataag 480

               
Query: 513 catg 516
           ||||
Sbjct: 481 catg 484



to top

>emb|AJ251931.1|HVU251931 Hordeum vulgare itr1 gene for BTI-CMe2.1
          Length = 800

 Score =  848 bits (428), Expect = 0.0
 Identities = 491/512 (95%)
 Strand = Plus / Plus

                                                                       
Query: 5   ccaacaacatcccttctaaacgaaaacaatggcgttcaagtaccagctcatcctctcggc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 ccaacaacatcccttctaaacgaaaacaatggcgttcaagtaccagctcatcctctcggc 348

                                                                       
Query: 65  cgccgtcatgctcgccattctcgtcgccactgccaccagtttcggggattcgtgtgctcc 124
           ||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||
Sbjct: 349 cgccgtcatgctcgccattctcgtcgccactgccaccagtttcggtgatatgtgtgctcc 408

                                                                       
Query: 125 aggggatgcgttgccacacaaccctctcagagcctgccgcacctacgtggtcagtcaaat 184
           ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||  |
Sbjct: 409 aggagatgagttgccacacaaccctctcagagcctgccgcacctacgtggtcagtcagct 468

                                                                       
Query: 185 ctgccaccaaggccccagactcctcacctcggacatgaagaggcggtattgcgacgagtt 244
           ||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||| |
Sbjct: 469 ctgccaccaaggcccaagactcctcacctcggacatgaagaggcgttgttgcgacgagct 528

                                                                       
Query: 245 gtcggccatcccggcgtactgcaggtgcgaagcgctgcgtatcatcatgcaaggggtagt 304
           |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 529 gtcggccatcccggtgtactgtaggtgcgaagcgctgcgtatcatcatgcaaggggtagt 588

                                                                       
Query: 305 aacttggcagggtgcgttcgagggtgcctacttcaaggacacgcccaactgccctaggga 364
           ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 589 aacttggcagggtgcgttcgagggtgcttacttcaaggactcgcccaactgccctaggga 648

                                                                       
Query: 365 gaggcaaacgagctacgccgccaacctcgtcaccccgcaggagtgcaacctatggaccat 424
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 649 gaggcaaacgagctacgccgccaacctcgtcaccccgcaggagtgcaacctagggaccat 708

                                                                       
Query: 425 ccacggcagcccgtcctgccccgaactgcagcccggatatggagtggtctcgtcataagt 484
           |||||||||| ||| ||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 709 ccacggcagcgcgtactgccccgaactgcagcccggatatggagtggtcttgtaataagt 768

                                           
Query: 485 tataacgactagctcgatcatgaataagcatg 516
           | ||||||||||||||||||||||||||||||
Sbjct: 769 tctaacgactagctcgatcatgaataagcatg 800



to top

>emb|X98593.1|HVITR11 H.vulgare itr1.1 gene
          Length = 799

 Score =  842 bits (425), Expect = 0.0
 Identities = 491/513 (95%)
 Strand = Plus / Plus

                                                                       
Query: 5   ccaacaacatcccttctaaacgaaaacaatggcgttcaagtaccagctcatcctctcggc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 287 ccaacaacatcccttctaaacgaaaacaatggcgttcaagtaccagctcctcctctcggc 346

                                                                       
Query: 65  cgccgtcatgctcgccattctcgtcgccactgccaccagtttcggggattcgtgtgctcc 124
           ||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||
Sbjct: 347 cgccgtcatgctcgccattctcgtcgccactgccaccagtttcggtgatatgtgtgctcc 406

                                                                       
Query: 125 aggggatgcgttgccacacaaccctctcagagcctgccgcacctacgtggtcagtcaaat 184
           ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||  |
Sbjct: 407 aggagatgagttgccacacaaccctctcagagcctgccgcacctacgtggtcagtcagct 466

                                                                       
Query: 185 ctgccaccaaggccccagactcctcacctcggacatgaagaggcggtattgcgacgagtt 244
           ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |
Sbjct: 467 ctgccaccaaggccccagactcctcacctcggacatgaagaggcgttgttgcgacgagct 526

                                                                       
Query: 245 gtcggccatcccggcgtactgcaggtgcgaagcgctgcgtatcatcatgcaaggggtagt 304
           |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 527 gtcggccatcccggtgtactgtaggtgcgaagcgctgcgtatcatcatgcaaggggtagt 586

                                                                       
Query: 305 aacttggcagggtgcgttcgagggtgcctacttcaaggacacgcccaactgccctaggga 364
           ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 587 aacttggcagggtgcgttcgagggtgcttacttcaaggactcgcccaactgccctaggga 646

                                                                       
Query: 365 gaggcaaacgagctacgccgccaacctcgtcaccccgcaggagtgcaacctatggaccat 424
           |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 647 gagggaaacgagctacgccgccaacctcgtcaccccgcaggagtgcaacctagggaccat 706

                                                                       
Query: 425 ccacggcagcccgtcctgccccgaactgcagcccggatatggagtggtctcgtcataagt 484
           |||||||||| ||| ||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 707 ccacggcagcgcgtactgccccgaactgcagcccggatatggagtggtcttgtaataagt 766

                                            
Query: 485 tataacgactagctcgatcatgaataagcatgg 517
           | |||||||||||||||||||||||||||||||
Sbjct: 767 tctaacgactagctcgatcatgaataagcatgg 799



to top

>emb|AJ222974.1|HSAJ2974 Hordeum spontaneum Itr1 gene for BTI-CMe2.1 protein
          Length = 484

 Score =  817 bits (412), Expect = 0.0
 Identities = 466/484 (96%)
 Strand = Plus / Plus

                                                                       
Query: 33  atggcgttcaagtaccagctcatcctctcggccgccgtcatgctcgccattctcgtcgcc 92
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct: 1   atggcgttcaagtaccagctcctcctctcggccgccgtcatgctcgccattctcgccgcc 60

                                                                       
Query: 93  actgccaccagtttcggggattcgtgtgctccaggggatgcgttgccacacaaccctctc 152
           |||| ||||||||||||||||  |||||||||||| |||| |||||||||||||||||||
Sbjct: 61  actgtcaccagtttcggggatatgtgtgctccaggagatgagttgccacacaaccctctc 120

                                                                       
Query: 153 agagcctgccgcacctacgtggtcagtcaaatctgccaccaaggccccagactcctcacc 212
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 121 agagcctgccgcacctacgtggtcagtcaagtctgccaccaaggccccagactcctcacc 180

                                                                       
Query: 213 tcggacatgaagaggcggtattgcgacgagttgtcggccatcccggcgtactgcaggtgc 272
           ||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||
Sbjct: 181 tcggacatgaagaggcggtgttgcgacgagctgtcggccatcccggcgtactgtaggtgc 240

                                                                       
Query: 273 gaagcgctgcgtatcatcatgcaaggggtagtaacttggcagggtgcgttcgagggtgcc 332
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaagcgctgcgtatcatcatgcaaggggtagtaacttggcagggtgcgttcgagggtgcc 300

                                                                       
Query: 333 tacttcaaggacacgcccaactgccctagggagaggcaaacgagctacgccgccaacctc 392
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tacttcaaggactcgcccaactgccctagggagaggcaaacgagctacgccgccaacctc 360

                                                                       
Query: 393 gtcaccccgcaggagtgcaacctatggaccatccacggcagcccgtcctgccccgaactg 452
           |||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||
Sbjct: 361 gtcaccccgcaggagtgcaacctagggaccatccacggcagcgcgtactgccccgaactg 420

                                                                       
Query: 453 cagcccggatatggagtggtctcgtcataagttataacgactagctcgatcatgaataag 512
           |||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||
Sbjct: 421 cagcccggatatggagtggtcttgtaataagttctaacgactagctcgatcatgaataag 480

               
Query: 513 catg 516
           ||||
Sbjct: 481 catg 484



to top

>emb|AJ222976.1|HSAJ2976 Hordeum spontaneum Itr1 gene for BTI-CMe4 protein
          Length = 481

 Score =  702 bits (354), Expect = 0.0
 Identities = 452/484 (93%), Gaps = 3/484 (0%)
 Strand = Plus / Plus

                                                                       
Query: 33  atggcgttcaagtaccagctcatcctctcggccgccgtcatgctcgccattctcgtcgcc 92
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct: 1   atggcgttcaagtaccagctcctcctctcggccgccgtcatgctcgccattctcgccgcc 60

                                                                       
Query: 93  actgccaccagtttcggggattcgtgtgctccaggggatgcgttgccacacaaccctctc 152
           |||| ||||||||||||||||  |||||||||||||||||||||||||  ||||||||||
Sbjct: 61  actgtcaccagtttcggggatatgtgtgctccaggggatgcgttgccagccaaccctctc 120

                                                                       
Query: 153 agagcctgccgcacctacgtggtcagtcaaatctgccaccaaggccccagactcctcacc 212
           ||||||||||||||||| ||||| ||||||||||||||   |||||| |||||   ||||
Sbjct: 121 agagcctgccgcacctatgtggttagtcaaatctgccatgtaggccctagactatccacc 180

                                                                       
Query: 213 tcggacatgaagaggcggtattgcgacgagttgtcggccatcccggcgtactgcaggtgc 272
           | ||||||||| |||||||  ||||||||| ||||||||||||||||||||||||| |||
Sbjct: 181 tgggacatgaaaaggcggtgctgcgacgagctgtcggccatcccggcgtactgcagatgc 240

                                                                       
Query: 273 gaagcgctgcgtatcatcatgcaaggggtagtaacttggcagggtgcgttcgagggtgcc 332
           |  |||||||||||||||||| | ||| |||||||||||||||||| |||||   |||||
Sbjct: 241 gcggcgctgcgtatcatcatggatgggatagtaacttggcagggtgtgttcg---gtgcc 297

                                                                       
Query: 333 tacttcaaggacacgcccaactgccctagggagaggcaaacgagctacgccgccaacctc 392
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 tacttcaaggacatgcccaactgccctagggagaggcaaacgagctacgccgccaacctc 357

                                                                       
Query: 393 gtcaccccgcaggagtgcaacctatggaccatccacggcagcccgtcctgccccgaactg 452
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 gtcaccccgcaggagtgcaacctatggaccatccacggcagcccgtcctgccccgaactg 417

                                                                       
Query: 453 cagcccggatatggagtggtctcgtcataagttataacgactagctcgatcatgaataag 512
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 cagcccggatatggagtggtctcgtcataagttataacgactagctcgatcatgaataag 477

               
Query: 513 catg 516
           ||||
Sbjct: 478 catg 481



to top

>emb|AJ222975.1|HSAJ2975 Hordeum spontaneum Itr1 gene for BTI-CMe2.2 protein
          Length = 481

 Score =  638 bits (322), Expect = e-180
 Identities = 444/484 (91%), Gaps = 3/484 (0%)
 Strand = Plus / Plus

                                                                       
Query: 33  atggcgttcaagtaccagctcatcctctcggccgccgtcatgctcgccattctcgtcgcc 92
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct: 1   atggcgttcaagtaccagctcctcctctcggccgccgtcatgctcgccattctcgccgcc 60

                                                                       
Query: 93  actgccaccagtttcggggattcgtgtgctccaggggatgcgttgccacacaaccctctc 152
           |||| ||||||||||||||||  |||||||||||||||||||||||||  ||||||||||
Sbjct: 61  actgtcaccagtttcggggatatgtgtgctccaggggatgcgttgccagccaaccctctc 120

                                                                       
Query: 153 agagcctgccgcacctacgtggtcagtcaaatctgccaccaaggccccagactcctcacc 212
           ||||||||||||||||| ||||| ||||||||||||||   |||||| |||||   ||||
Sbjct: 121 agagcctgccgcacctatgtggttagtcaaatctgccatgtaggccctagactatccacc 180

                                                                       
Query: 213 tcggacatgaagaggcggtattgcgacgagttgtcggccatcccggcgtactgcaggtgc 272
           | |||||||||||||||||  ||||||||| ||||||||||||||||||||||||| |||
Sbjct: 181 tgggacatgaagaggcggtgctgcgacgagctgtcggccatcccggcgtactgcagatgc 240

                                                                       
Query: 273 gaagcgctgcgtatcatcatgcaaggggtagtaacttggcagggtgcgttcgagggtgcc 332
           || |||||||||||||||||| | |||  ||||||||||||||||| ||||   ||||||
Sbjct: 241 gaggcgctgcgtatcatcatggatgggacagtaacttggcagggtgtgttc---ggtgcc 297

                                                                       
Query: 333 tacttcaaggacacgcccaactgccctagggagaggcaaacgagctacgccgccaacctc 392
           ||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 298 tacttcaaggacatgcccaactgccctagggtgatgcaaacgagctacgccgccaacctc 357

                                                                       
Query: 393 gtcaccccgcaggagtgcaacctatggaccatccacggcagcccgtcctgccccgaactg 452
           |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 358 gtcaacccgcaggagtgcaacctatggactatccacggcagcccgtcctgccccgaactg 417

                                                                       
Query: 453 cagcccggatatggagtggtctcgtcataagttataacgactagctcgatcatgaataag 512
           ||||||||||||| |||||||| || | ||||| ||||||||||||||||||||||||||
Sbjct: 418 cagcccggatatgaagtggtcttgtaacaagttctaacgactagctcgatcatgaataag 477

               
Query: 513 catg 516
           ||||
Sbjct: 478 catg 481



to top

>emb|AJ223458.1|HVAJ3458 Hordeum vulgare Itr1 gene for BTI-CMe2.2 protein, cultivar Hatif de
           Grignon
          Length = 787

 Score =  622 bits (314), Expect = e-175
 Identities = 445/488 (91%), Gaps = 3/488 (0%)
 Strand = Plus / Plus

                                                                       
Query: 29  aacaatggcgttcaagtaccagctcatcctctcggccgccgtcatgctcgccattctcgt 88
           ||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||| 
Sbjct: 303 aacaatggcgttcaagtaccaactcctcctctcggccgccgtcatgctcgccactctcgc 362

                                                                       
Query: 89  cgccactgccaccagtttcggggattcgtgtgctccaggggatgcgttgccacacaaccc 148
           |||||||| ||||||||||||||||  |||||||||||||||||||||||||  ||||||
Sbjct: 363 cgccactgtcaccagtttcggggatatgtgtgctccaggggatgcgttgccagccaaccc 422

                                                                       
Query: 149 tctcagagcctgccgcacctacgtggtcagtcaaatctgccaccaaggccccagactcct 208
           ||||||||||||||||||||| ||||| ||||||||||||||   |||||| |||||   
Sbjct: 423 tctcagagcctgccgcacctatgtggttagtcaaatctgccatgtaggccctagactatc 482

                                                                       
Query: 209 cacctcggacatgaagaggcggtattgcgacgagttgtcggccatcccggcgtactgcag 268
           ||||| |||||||||||||||||  ||||||||| |||||||||||||||||||||||||
Sbjct: 483 cacctgggacatgaagaggcggtgctgcgacgagctgtcggccatcccggcgtactgcag 542

                                                                       
Query: 269 gtgcgaagcgctgcgtatcatcatgcaaggggtagtaacttggcagggtgcgttcgaggg 328
            ||||| |||||||||||||||||| | |||  ||||||||||||||||| ||||   ||
Sbjct: 543 atgcgaggcgctgcgtatcatcatggatgggacagtaacttggcagggtgtgttc---gg 599

                                                                       
Query: 329 tgcctacttcaaggacacgcccaactgccctagggagaggcaaacgagctacgccgccaa 388
           ||||||||||||||||| ||||||| ||||||||| || |||||||||||||||||||||
Sbjct: 600 tgcctacttcaaggacatgcccaacagccctagggtgatgcaaacgagctacgccgccaa 659

                                                                       
Query: 389 cctcgtcaccccgcaggagtgcaacctatggaccatccacggcagcccgtcctgccccga 448
           |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 660 cctcgtcaacccgcaggagtgcaacctatggactatccacggcagcccgtcctgccccga 719

                                                                       
Query: 449 actgcagcccggatatggagtggtctcgtcataagttataacgactagctcgatcatgaa 508
           ||||||||||||||||| |||||||| || | ||||| ||||||||||||||||||||||
Sbjct: 720 actgcagcccggatatgaagtggtcttgtaacaagttctaacgactagctcgatcatgaa 779

                   
Query: 509 taagcatg 516
           ||||||||
Sbjct: 780 taagcatg 787



to top

>emb|X98594.1|HVITR12 H.vulgare itr1.2 gene
          Length = 789

 Score =  601 bits (303), Expect = e-168
 Identities = 443/489 (90%), Gaps = 3/489 (0%)
 Strand = Plus / Plus

                                                                       
Query: 29  aacaatggcgttcaagtaccagctcatcctctcggccgccgtcatgctcgccattctcgt 88
           ||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||| 
Sbjct: 304 aacaatggcgttcaagtaccaactcctcctctcggccgccgtcatgctcgccactctcgc 363

                                                                       
Query: 89  cgccactgccaccagtttcggggattcgtgtgctccaggggatgcgttgccacacaaccc 148
           |||||||| |||||||||||| |||  |||||||||||| ||||||||||||  ||||||
Sbjct: 364 cgccactgtcaccagtttcggtgatatgtgtgctccaggagatgcgttgccagccaaccc 423

                                                                       
Query: 149 tctcagagcctgccgcacctacgtggtcagtcaaatctgccaccaaggccccagactcct 208
           ||||||||||||||||||||| ||||| ||||||||||||||   |||||| |||||   
Sbjct: 424 tctcagagcctgccgcacctatgtggttagtcaaatctgccatgtaggccctagactatc 483

                                                                       
Query: 209 cacctcggacatgaagaggcggtattgcgacgagttgtcggccatcccggcgtactgcag 268
           |||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||
Sbjct: 484 cacctcggacatgaagaggcggtgctgcgacgagctgtcggccatcccggcgtactgcag 543

                                                                       
Query: 269 gtgcgaagcgctgcgtatcatcatgcaaggggtagtaacttggcagggtgcgttcgaggg 328
            ||||| |||||||||||||||||| | |||  ||||||||||||||||| ||||   ||
Sbjct: 544 atgcgaggcgctgcgtatcatcatggatgggacagtaacttggcagggtgtgttc---gg 600

                                                                       
Query: 329 tgcctacttcaaggacacgcccaactgccctagggagaggcaaacgagctacgccgccaa 388
           ||| ||||||||||||| ||||||||||||||||| || |||||||||||||||||||||
Sbjct: 601 tgcttacttcaaggacatgcccaactgccctagggtgatgcaaacgagctacgccgccaa 660

                                                                       
Query: 389 cctcgtcaccccgcaggagtgcaacctatggaccatccacggcagcccgtcctgccccga 448
           |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 661 cctcgtcaacccgcaggagtgcaacctatggactatccacggcagcccgtcctgccccga 720

                                                                       
Query: 449 actgcagcccggatatggagtggtctcgtcataagttataacgactagctcgatcatgaa 508
           ||||||||||||||||| |||||||| || | ||||| ||||||||||  ||||||||||
Sbjct: 721 actgcagcccggatatgaagtggtcttgtaacaagttctaacgactagtccgatcatgaa 780

                    
Query: 509 taagcatgg 517
           |||||||||
Sbjct: 781 taagcatgg 789



to top

>emb|X75610.1|TACMX3 T.aestivum Itrl-3 mRNA for CMx
          Length = 568

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                          
Query: 33 atggcgttcaagtaccagctcatcctctcggccgccgtcatgctcgcc 80
          |||||||||||| ||||||||||||||||  ||||| || ||||||||
Sbjct: 1  atggcgttcaagcaccagctcatcctctccaccgccatcctgctcgcc 48



to top

>emb|X75609.1|YACMX2 T.aestivum Itrl-2 mRNA for CMx
          Length = 574

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                          
Query: 33 atggcgttcaagtaccagctcatcctctcggccgccgtcatgctcgcc 80
          |||||||||||| ||||||||||||||||  ||||| || ||||||||
Sbjct: 1  atggcgttcaagcaccagctcatcctctccaccgccatcctgctcgcc 48



to top

>emb|X75608.1|TACMX1 T.aestivum Itrl-1 mRNA for CMx
          Length = 568

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                          
Query: 33 atggcgttcaagtaccagctcatcctctcggccgccgtcatgctcgcc 80
          |||||||||||| ||||||||||||||||  ||||| || ||||||||
Sbjct: 1  atggcgttcaagcaccagctcatcctctccaccgccatcctgctcgcc 48



to top

>gb|AC190220.1| Pan troglodytes chromosome 7 clone CH251-385D13, complete sequence
          Length = 172735

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 179  tcaaatctgccaccaaggcccc 200
            ||||||||||||||||||||||
Sbjct: 8601 tcaaatctgccaccaaggcccc 8622



to top

>gb|AC006970.6| Homo sapiens PAC clone RP4-725G10 from 7, complete sequence
          Length = 136098

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 179    tcaaatctgccaccaaggcccc 200
              ||||||||||||||||||||||
Sbjct: 111270 tcaaatctgccaccaaggcccc 111249



to top

>gb|AC150749.3| Pan troglodytes BAC clone CH251-553P23 from chromosome 7, complete
              sequence
          Length = 237211

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 179    tcaaatctgccaccaaggcccc 200
              ||||||||||||||||||||||
Sbjct: 220019 tcaaatctgccaccaaggcccc 220040



to top

>dbj|AB025630.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MPA22
          Length = 51436

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 541   attgtatgcatctatgcccat 561
             |||||||||||||||||||||
Sbjct: 49111 attgtatgcatctatgcccat 49131



to top

>emb|CT835557.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI217I20, full
            insert sequence
          Length = 2150

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 386  caacctcgtcaccccgcaggagtgcaac 413
            ||||||||||| |||||||||| |||||
Sbjct: 1630 caacctcgtcaacccgcaggagcgcaac 1657



to top

>emb|CT835556.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI210B21, full
            insert sequence
          Length = 2156

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 386  caacctcgtcaccccgcaggagtgcaac 413
            ||||||||||| |||||||||| |||||
Sbjct: 1628 caacctcgtcaacccgcaggagcgcaac 1655



to top

>ref|NM_001073046.1| Oryza sativa (japonica cultivar-group) Os12g0257800 (Os12g0257800)
           mRNA, complete cds
          Length = 573

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 386 caacctcgtcaccccgcaggagtgcaac 413
           ||||||||||| |||||||||| |||||
Sbjct: 336 caacctcgtcaacccgcaggagcgcaac 363



to top

>gb|CP000431.1| Rhodococcus sp. RHA1, complete genome
          Length = 7804765

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 380     cgccgccaacctcgtcaccc 399
               ||||||||||||||||||||
Sbjct: 4342098 cgccgccaacctcgtcaccc 4342117



to top

>emb|CR812482.14| Zebrafish DNA sequence from clone CH211-157N19 in linkage group 1,
              complete sequence
          Length = 179573

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 559    catgtgtgatgtgtgttaaa 578
              ||||||||||||||||||||
Sbjct: 142057 catgtgtgatgtgtgttaaa 142038



to top

>gb|CP000032.1| Silicibacter pomeroyi DSS-3 plasmid megaplasmid, complete sequence
          Length = 491611

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 77     cgccattctcgtcgccactg 96
              ||||||||||||||||||||
Sbjct: 398106 cgccattctcgtcgccactg 398087



to top

>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome
          Length = 2364842

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 51      ctcatcctctcggccgccgtcatgctcg 78
               ||||||||||||||||||| ||| ||||
Sbjct: 1802326 ctcatcctctcggccgccgccatcctcg 1802353



to top

>gb|AF106583.1| Caenorhabditis elegans cosmid F23C8, complete sequence
          Length = 38419

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 513   catggtgcatcgatcaatgg 532
             ||||||||||||||||||||
Sbjct: 12184 catggtgcatcgatcaatgg 12165



to top

>gb|AC135079.9| Mus musculus chromosome 15, clone RP24-439P7, complete sequence
          Length = 155778

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 132   gcgttgccacacaaccctctcaga 155
             |||||||||||||| |||||||||
Sbjct: 59179 gcgttgccacacaatcctctcaga 59156



to top

>gb|AY450285.1| Pseudomonas putida NCIMB 10007 plasmid CAM CamP (camP), regulatory
            protein, and lactone hydrolase (camQ) genes, complete cds
          Length = 4485

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 90   gccactgccaccagtttcgg 109
            ||||||||||||||||||||
Sbjct: 1973 gccactgccaccagtttcgg 1954



to top

>gb|AC101882.14| Mus musculus chromosome 10, clone RP23-394M6, complete sequence
          Length = 209838

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 555   tgcccatgtgtgatgtgtgt 574
             ||||||||||||||||||||
Sbjct: 91269 tgcccatgtgtgatgtgtgt 91288



to top

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12
          Length = 27566993

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 386     caacctcgtcaccccgcaggagtgcaac 413
               ||||||||||| |||||||||| |||||
Sbjct: 8873428 caacctcgtcaacccgcaggagcgcaac 8873455



to top

>emb|AL136442.12| Human DNA sequence from clone RP11-25J23 on chromosome 13 Contains the
             3' end of a novel gene (KIAA1165) (likely ortholog of
             mouse Nedd4 WW domain-binding protein 5A) and a novel
             gene, complete sequence
          Length = 157695

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 557   cccatgtgtgatgtgtgtta 576
             ||||||||||||||||||||
Sbjct: 33637 cccatgtgtgatgtgtgtta 33618



to top

>emb|BX901898.15| Zebrafish DNA sequence from clone DKEY-148E3 in linkage group 1, complete
              sequence
          Length = 249378

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 559    catgtgtgatgtgtgttaaa 578
              ||||||||||||||||||||
Sbjct: 154046 catgtgtgatgtgtgttaaa 154065



to top

>gb|AC018843.4|AC018843 Homo sapiens chromosome 3 clone RP11-900O22 map 3p, complete sequence
          Length = 211012

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 152    cagagcctgccgcacctacgtggt 175
              ||||||||| ||||||||||||||
Sbjct: 192324 cagagcctggcgcacctacgtggt 192301



to top

>dbj|AP006240.1| Homo sapiens genomic DNA, chromosome 3, clone:RP11-359D8, complete
              sequence
          Length = 193414

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 193    aaggccccagactcctcacc 212
              ||||||||||||||||||||
Sbjct: 178818 aaggccccagactcctcacc 178799



to top

>emb|AL954154.5|CNS08CCS Oryza sativa chromosome 12, . BAC OSJNBb0072E04 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 151176

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 386   caacctcgtcaccccgcaggagtgcaac 413
             ||||||||||| |||||||||| |||||
Sbjct: 62057 caacctcgtcaacccgcaggagcgcaac 62084



to top

>gb|AC034198.7| Homo sapiens chromosome 3 clone RP11-767C1 map 3p, complete sequence
          Length = 169005

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 152   cagagcctgccgcacctacgtggt 175
             ||||||||| ||||||||||||||
Sbjct: 49295 cagagcctggcgcacctacgtggt 49272



to top

>gb|AC018836.5| Homo sapiens chromosome 3 clone RP11-588P9 map 3p, complete sequence
          Length = 184716

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 152    cagagcctgccgcacctacgtggt 175
              ||||||||| ||||||||||||||
Sbjct: 127937 cagagcctggcgcacctacgtggt 127914



to top

>dbj|AP000494.1| Homo sapiens genomic DNA, chromosome 3p21.3, clone:301 to 308,
              anti-oncogene region, section 2/5
          Length = 200000

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 193    aaggccccagactcctcacc 212
              ||||||||||||||||||||
Sbjct: 176123 aaggccccagactcctcacc 176104


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 79,800,132
Number of extensions: 3667036
Number of successful extensions: 65102
Number of sequences better than 10.0: 38
Number of HSP's gapped: 65093
Number of HSP's successfully gapped: 40
Length of query: 622
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 600
Effective length of database: 18,508,616,841
Effective search space: 11105170104600
Effective search space used: 11105170104600
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
to top