ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf30h13 |
|---|---|
| Clone Library Name | barley_pub |
>AK061679:Os02g0622400 | Length = 202 Score = 382 bits (980), Expect = e-106 Identities = 183/202 (90%), Positives = 196/202 (97%) Frame = +3 Query: 159 MAETVFSPCLEGMNHVRSDSGVMLSKPFLDVCKQILPVLDKFGAAMAIVKSDIGGNITRL 338 MAETVF+P LEGM HV+S+S V+L+KPFLDVCKQILPVLDKFGAAMA+VKSDIGGNITRL Sbjct: 1 MAETVFTPSLEGMKHVKSESSVILTKPFLDVCKQILPVLDKFGAAMALVKSDIGGNITRL 60 Query: 339 ENKYSSDPAKYEHLYTMVQEEVEKKTAKGSSSCTNGLLWLTRAMDFLVELFRNLLDHPDW 518 ENKYSSDP+KYE LY+MVQEEV+ KTAKGSSSCTNGLLWLTRAMDFLVELFRNLL+H DW Sbjct: 61 ENKYSSDPSKYEQLYSMVQEEVQNKTAKGSSSCTNGLLWLTRAMDFLVELFRNLLEHQDW 120 Query: 519 TMSQACTDSYTKTLKKWHGWLASSSFTVAMKLAPNKDKFMEVISGTGDIKADIEKFCTTF 698 TMSQACTDSYTKTLKKWHGWLASSSFTVAMKLAPN++KFMEVISGTGDIKADIEKFCTTF Sbjct: 121 TMSQACTDSYTKTLKKWHGWLASSSFTVAMKLAPNREKFMEVISGTGDIKADIEKFCTTF 180 Query: 699 YPFLKENHDFLASVGLDDMKAS 764 YPFLKENHDFLASVGLDD+KAS Sbjct: 181 YPFLKENHDFLASVGLDDLKAS 202
>Os08g0108700:Os08g0108700 | Length = 245 Score = 104 bits (259), Expect = 1e-22 Identities = 54/147 (36%), Positives = 88/147 (59%), Gaps = 10/147 (6%) Frame = +3 Query: 243 LDVCKQILPVLDKFGAAMAIVKSDIGGNITRLENKYSSDPAKYEHLYTMVQEEVEKKTAK 422 L V K I+ VLD+ G + +++ DI N+ RL++ + DP+KY L +V EEVE+ T+K Sbjct: 48 LCVSKHIIHVLDEIGPTLLVLRQDIQQNVQRLQDVLARDPSKYSSLTAIVTEEVEEGTSK 107 Query: 423 GSSSCTNGLLWLT---------RAMDFLVELFRNLLDHPDW-TMSQACTDSYTKTLKKWH 572 ++SCT +LWL R+++F L LL+ D ++ + +Y TLK WH Sbjct: 108 KANSCTRAILWLASAVLRILPIRSINFSKHLLEGLLNTCDQSSLREIVEKAYITTLKPWH 167 Query: 573 GWLASSSFTVAMKLAPNKDKFMEVISG 653 GW++S+++ VA KL P K+ F+ ++ G Sbjct: 168 GWISSAAYRVAQKLIPEKEIFIALLMG 194
>AK065524:Os04g0438600 | Length = 196 Score = 68.6 bits (166), Expect = 8e-12 Identities = 36/88 (40%), Positives = 56/88 (63%) Frame = +3 Query: 240 FLDVCKQILPVLDKFGAAMAIVKSDIGGNITRLENKYSSDPAKYEHLYTMVQEEVEKKTA 419 FL + +L VLDK G MA+++ D+ NI RL+ Y DP+KY +L ++++EV++ TA Sbjct: 108 FLALSHLLLQVLDKIGPTMAVLRLDVQRNIERLQELYLLDPSKYYNLEEILEKEVDEGTA 167 Query: 420 KGSSSCTNGLLWLTRAMDFLVELFRNLL 503 + SC +LWLTR D+ L R++L Sbjct: 168 RKVDSCARAILWLTR--DWRRILIRSVL 193
>AK099097:Os03g0784900 | Length = 207 Score = 45.4 bits (106), Expect = 7e-05 Identities = 38/191 (19%), Positives = 73/191 (38%), Gaps = 3/191 (1%) Frame = +3 Query: 186 LEGMNHVRSDSGVMLSKPFLDVCKQILPVLDKFGAAMAIVKSDIGGNITRLENKYSSDPA 365 LE + ++ M F C + + G A + D + L S Sbjct: 20 LEAVAKQQAPGPAMEVGSFARACSNVSVLFGCLGIAFKFAEMDYVAKVDDLLEASKS--- 76 Query: 366 KYEHLYTMVQEEVEKKTAKGSSSCTNGLLWLTRAMDFLVELFRNLLDHPDWTMSQACTDS 545 L MV+ +++K T + + S T +L + R +D + LF +L ++ A + + Sbjct: 77 -ISKLPEMVELDIQKGTVRQAGSHTRNMLRVKRGIDMVKILFEQILVTEGNSLRDAASKA 135 Query: 546 YTKTLKKWHGWLASSSFTVAMKLAPNKDKFMEVIS-GTGDIKADIEKFCTTFYPFLKENH 722 Y + HGW + M P+K + ++ ++ K ++ F P + Sbjct: 136 YAQVFAPHHGWAIRKAVAAGMYALPSKSQLLKKLNEDENSAKVQMQTFIRASGPVILYVE 195 Query: 723 DFLAS--VGLD 749 D S +G+D Sbjct: 196 DLFTSRNLGMD 206
>AK060949:Os03g0784900 | Length = 207 Score = 45.4 bits (106), Expect = 7e-05 Identities = 38/191 (19%), Positives = 73/191 (38%), Gaps = 3/191 (1%) Frame = +3 Query: 186 LEGMNHVRSDSGVMLSKPFLDVCKQILPVLDKFGAAMAIVKSDIGGNITRLENKYSSDPA 365 LE + ++ M F C + + G A + D + L S Sbjct: 20 LEAVAKQQAPGPAMEVGSFARACSNVSVLFGCLGIAFKFAEMDYVAKVDDLLEASKS--- 76 Query: 366 KYEHLYTMVQEEVEKKTAKGSSSCTNGLLWLTRAMDFLVELFRNLLDHPDWTMSQACTDS 545 L MV+ +++K T + + S T +L + R +D + LF +L ++ A + + Sbjct: 77 -ISKLPEMVELDIQKGTVRQAGSHTRNMLRVKRGIDMVKILFEQILVTEGNSLRDAASKA 135 Query: 546 YTKTLKKWHGWLASSSFTVAMKLAPNKDKFMEVIS-GTGDIKADIEKFCTTFYPFLKENH 722 Y + HGW + M P+K + ++ ++ K ++ F P + Sbjct: 136 YAQVFAPHHGWAIRKAVAAGMYALPSKSQLLKKLNEDENSAKVQMQTFIRASGPVILYVE 195 Query: 723 DFLAS--VGLD 749 D S +G+D Sbjct: 196 DLFTSRNLGMD 206
>Os09g0450600:Os09g0450600 | Length = 481 Score = 31.6 bits (70), Expect = 1.1 Identities = 20/43 (46%), Positives = 22/43 (51%), Gaps = 1/43 (2%) Frame = +1 Query: 1 GRLLPPPHRTSSPARF-LPPPTGRASLLQFPRPSSHERRPKAP 126 GRLLPPP SS R L PT A L+ H RRP+ P Sbjct: 108 GRLLPPPRLASSRRRLPLSSPTPAAELVA-SLAGRHARRPRRP 149
>AK109614:Os06g0324000 | Length = 229 Score = 31.2 bits (69), Expect = 1.4 Identities = 17/36 (47%), Positives = 18/36 (50%) Frame = +1 Query: 19 PHRTSSPARFLPPPTGRASLLQFPRPSSHERRPKAP 126 PHR SP LPPP S + P P RRP AP Sbjct: 160 PHRPRSPHAVLPPPMPSPSPVS-PLPPPLHRRPPAP 194 Score = 28.5 bits (62), Expect = 9.3 Identities = 15/36 (41%), Positives = 15/36 (41%) Frame = +1 Query: 19 PHRTSSPARFLPPPTGRASLLQFPRPSSHERRPKAP 126 PHR SP LPPPT S P R P P Sbjct: 86 PHRPRSPLAVLPPPTPSPSPASPLLPPLRRRPPTPP 121
>AK102094:Os04g0177300 | Length = 664 Score = 30.0 bits (66), Expect = 3.2 Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 1/149 (0%) Frame = +3 Query: 276 DKFGAAMAIVKSDIGGNITRLENKYSSDPAK-YEHLYTMVQEEVEKKTAKGSSSCTNGLL 452 DK G + ++ NI +E + S D YE L+ + + +K A+GS L Sbjct: 301 DKMGNPILVLPP---ANIEIVECEQSEDERDFYEALFRRSKVQFDKFVAQGSV-----LN 352 Query: 453 WLTRAMDFLVELFRNLLDHPDWTMSQACTDSYTKTLKKWHGWLASSSFTVAMKLAPNKDK 632 ++ L+ L R DHP +S+A T YT + +L A + AP Sbjct: 353 NYANILELLLRL-RQCCDHPFLVISRADTQKYTDLDELAQRFLDGVQRDSARRSAPPSQA 411 Query: 633 FMEVISGTGDIKADIEKFCTTFYPFLKEN 719 ++E ++ +I + TT P E+ Sbjct: 412 YVE------EVVEEIRQGATTECPICLES 434
>AK103935:Os03g0753500 | Length = 516 Score = 30.0 bits (66), Expect = 3.2 Identities = 13/39 (33%), Positives = 19/39 (48%) Frame = +1 Query: 19 PHRTSSPARFLPPPTGRASLLQFPRPSSHERRPKAPQFA 135 P ++SSP LPPP +P PS + P+F+ Sbjct: 214 PPKSSSPPTLLPPPPPPPREKMYPNPSGEPWHTRKPRFS 252
>AK100468:Os03g0753500 | Length = 516 Score = 30.0 bits (66), Expect = 3.2 Identities = 13/39 (33%), Positives = 19/39 (48%) Frame = +1 Query: 19 PHRTSSPARFLPPPTGRASLLQFPRPSSHERRPKAPQFA 135 P ++SSP LPPP +P PS + P+F+ Sbjct: 214 PPKSSSPPTLLPPPPPPPREKMYPNPSGEPWHTRKPRFS 252
>AK070136:Os03g0753500 | Length = 516 Score = 30.0 bits (66), Expect = 3.2 Identities = 13/39 (33%), Positives = 19/39 (48%) Frame = +1 Query: 19 PHRTSSPARFLPPPTGRASLLQFPRPSSHERRPKAPQFA 135 P ++SSP LPPP +P PS + P+F+ Sbjct: 214 PPKSSSPPTLLPPPPPPPREKMYPNPSGEPWHTRKPRFS 252
>AK122123:Os07g0164900 | Length = 604 Score = 29.6 bits (65), Expect = 4.2 Identities = 21/71 (29%), Positives = 33/71 (46%) Frame = -2 Query: 764 RSLHVIESNTGQEVMILLEKGIKGGAEFLNVCFDVTRSANYLHKFIFVRSKLHSNRKTGA 585 R+LH +ES + + E + G ++C + SANY H+ +RS SNR Sbjct: 316 RNLHTVESLSLYHSECM-EDAL--GYTLPSICNQLITSANYQHQLEMIRSFNKSNRWKKR 372 Query: 584 GEPAMPFLQSF 552 G +P + F Sbjct: 373 GLSVVPIVHKF 383
>AK107106:Os03g0383100 | Length = 478 Score = 29.6 bits (65), Expect = 4.2 Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 1/62 (1%) Frame = -2 Query: 230 QHDPAVRPDMVHP-FQTRAEYRLCHLPLPLHDLANCGAFGLLSCELGRGNCRREALPVGG 54 +H V D+VHP + + L + L + C G GR + R+EAL VGG Sbjct: 123 RHPAGVEADVVHPCLEVDLQLGLPSVAAALQQILPCQVGGEPGDFHGREDARQEALQVGG 182 Query: 53 GR 48 R Sbjct: 183 ER 184
>Os02g0735500:Os02g0735500 | Length = 159 Score = 29.3 bits (64), Expect = 5.5 Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 6/50 (12%) Frame = +1 Query: 4 RLLPPPHRTSSPARFLPPPTGRASLLQFPRPSSHER------RPKAPQFA 135 R LPPP R S P PP RA + RP R RP+AP A Sbjct: 32 RALPPPRRVSPP----PPLAARACESRAERPPPLARAPRSQSRPRAPSLA 77
>AK110125: | Length = 1189 Score = 29.3 bits (64), Expect = 5.5 Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 7/48 (14%) Frame = +1 Query: 13 PPPHRTSSPARFLPPPTGRASLLQFPRP-------SSHERRPKAPQFA 135 PPP +PA LPPPT AS + P P S + +APQ A Sbjct: 317 PPPPAPPAPAASLPPPTRTASAV-LPPPVRKTVSFQSQQEAQQAPQEA 363
>AK104043:Os07g0657200 | Length = 549 Score = 28.9 bits (63), Expect = 7.1 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = +3 Query: 9 SSSPTSHFLPC*IPPSADRQGLSPAVPS 92 +++PTS F+P P R GLSP PS Sbjct: 384 ANNPTSRFMPSNNPGFVQRPGLSPVQPS 411
>AK100911:Os07g0657200 | Length = 1127 Score = 28.9 bits (63), Expect = 7.1 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = +3 Query: 9 SSSPTSHFLPC*IPPSADRQGLSPAVPS 92 +++PTS F+P P R GLSP PS Sbjct: 962 ANNPTSRFMPSNNPGFVQRPGLSPVQPS 989
>AK100264:Os07g0657200 | Length = 612 Score = 28.9 bits (63), Expect = 7.1 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = +3 Query: 9 SSSPTSHFLPC*IPPSADRQGLSPAVPS 92 +++PTS F+P P R GLSP PS Sbjct: 447 ANNPTSRFMPSNNPGFVQRPGLSPVQPS 474
>AK072927:Os07g0657200 | Length = 1127 Score = 28.9 bits (63), Expect = 7.1 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = +3 Query: 9 SSSPTSHFLPC*IPPSADRQGLSPAVPS 92 +++PTS F+P P R GLSP PS Sbjct: 962 ANNPTSRFMPSNNPGFVQRPGLSPVQPS 989
>AB042102:Os07g0657200 | Length = 1023 Score = 28.9 bits (63), Expect = 7.1 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = +3 Query: 9 SSSPTSHFLPC*IPPSADRQGLSPAVPS 92 +++PTS F+P P R GLSP PS Sbjct: 858 ANNPTSRFMPSNNPGFVQRPGLSPVQPS 885
>Os03g0256800:Os03g0256800 | Length = 1144 Score = 28.9 bits (63), Expect = 7.1 Identities = 17/33 (51%), Positives = 18/33 (54%) Frame = +1 Query: 25 RTSSPARFLPPPTGRASLLQFPRPSSHERRPKA 123 R +SPAR PTG A PRP H RRP A Sbjct: 919 RAASPAR----PTGAAR----PRPDGHRRRPPA 943
>Os02g0765900:Os02g0765900 | Length = 626 Score = 28.9 bits (63), Expect = 7.1 Identities = 20/43 (46%), Positives = 23/43 (53%), Gaps = 8/43 (18%) Frame = +1 Query: 19 PHRTSSPARFLPPPT----GRASLLQFPRPSSH----ERRPKA 123 PHR S+P PPP+ ASL +F PSSH RRP A Sbjct: 40 PHRNSAPP---PPPSPAMASSASLQRFLPPSSHVAASRRRPPA 79
>AK063542:Os06g0710800 | Length = 160 Score = 28.9 bits (63), Expect = 7.1 Identities = 16/40 (40%), Positives = 20/40 (50%) Frame = +1 Query: 4 RLLPPPHRTSSPARFLPPPTGRASLLQFPRPSSHERRPKA 123 RLLPPP R + R P G ++ P P + RRP A Sbjct: 39 RLLPPPARRHAGRRAAPQRRG----VRAPHPGARPRRPDA 74
>AK106879:Os02g0666700 | Length = 538 Score = 28.5 bits (62), Expect = 9.3 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 2/46 (4%) Frame = -2 Query: 221 PAVRPDMVHPFQTRAEY--RLCHLPLPLHDLANCGAFGLLSCELGR 90 PAV + P RA + R HLP + L CG FG+ S GR Sbjct: 132 PAVTHGLPFPVLARAAFGVRGAHLPAVIRALVGCGWFGIESWIGGR 177
>AK104112:Os09g0525400 | Length = 174 Score = 28.5 bits (62), Expect = 9.3 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = -3 Query: 994 TTKRLQKLILIPCIHSFHSVC 932 T K QKLI +PC H +H+ C Sbjct: 134 TYKSRQKLIRLPCSHCYHADC 154
>AK102929:Os06g0152300 | Length = 327 Score = 28.5 bits (62), Expect = 9.3 Identities = 15/40 (37%), Positives = 20/40 (50%) Frame = +3 Query: 630 KFMEVISGTGDIKADIEKFCTTFYPFLKENHDFLASVGLD 749 K V + + A IE FCTT +KEN F A + L+ Sbjct: 170 KIARVHAASDPSTASIEYFCTTAEDLVKENKQFDAVISLE 209
>AK066238:Os09g0525400 | Length = 174 Score = 28.5 bits (62), Expect = 9.3 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = -3 Query: 994 TTKRLQKLILIPCIHSFHSVC 932 T K QKLI +PC H +H+ C Sbjct: 134 TYKSRQKLIRLPCSHCYHADC 154
>AK064315:Os06g0152300 | Length = 327 Score = 28.5 bits (62), Expect = 9.3 Identities = 15/40 (37%), Positives = 20/40 (50%) Frame = +3 Query: 630 KFMEVISGTGDIKADIEKFCTTFYPFLKENHDFLASVGLD 749 K V + + A IE FCTT +KEN F A + L+ Sbjct: 170 KIARVHAASDPSTASIEYFCTTAEDLVKENKQFDAVISLE 209
>AK111162: | Length = 252 Score = 28.5 bits (62), Expect = 9.3 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%) Frame = +1 Query: 13 PPPHR--TSSPARFLPPPTGRASLLQFPRPSSHERRPKA 123 PPP R +S P+R LP P L+ PRP P+A Sbjct: 80 PPPRRRPSSRPSRLLPKPPRPPPPLRPPRPPRDPPPPRA 118
>AK120222:Os07g0596300 | Length = 754 Score = 28.5 bits (62), Expect = 9.3 Identities = 14/38 (36%), Positives = 14/38 (36%) Frame = +1 Query: 13 PPPHRTSSPARFLPPPTGRASLLQFPRPSSHERRPKAP 126 PPP P PPP GR S P P P P Sbjct: 197 PPPGARPGPPPPPPPPGGRPSAPPLPPPGGRASAPPPP 234
>AK101543:Os08g0104300 | Length = 495 Score = 28.5 bits (62), Expect = 9.3 Identities = 16/42 (38%), Positives = 24/42 (57%) Frame = +1 Query: 799 SSLAIFSNFIVAKNTLFCILILRKL*TNNKSIKTFGCS*PIL 924 SS A+ S+ + N+LFC ++L K +NK T G P+L Sbjct: 5 SSEAVLSSKVALLNSLFCTIVLPKENCSNKMNCTKGGGFPLL 46
>AK071682:Os07g0573300 | Length = 517 Score = 28.5 bits (62), Expect = 9.3 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 2/43 (4%) Frame = +1 Query: 13 PPPHRTSSPARFLPP--PTGRASLLQFPRPSSHERRPKAPQFA 135 PPPH SS A PP P AS + ++ P AP +A Sbjct: 26 PPPHPASSAADAAPPTIPASYASAPPYSVGGYSDQPPSAPSYA 68
>AK066524:Os10g0480500 | Length = 514 Score = 28.5 bits (62), Expect = 9.3 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%) Frame = +1 Query: 13 PPPHRTSSPARFLP-PPTGRASLLQFPRP 96 PPP R +SP R P PP S +Q P+P Sbjct: 323 PPPIRMASPVRIRPAPPLFTPSAVQGPKP 351
>AK060539:Os01g0821700 | Length = 155 Score = 28.5 bits (62), Expect = 9.3 Identities = 14/38 (36%), Positives = 18/38 (47%) Frame = +1 Query: 13 PPPHRTSSPARFLPPPTGRASLLQFPRPSSHERRPKAP 126 PPPH + A LPPP A++ PR R +P Sbjct: 83 PPPHSCAWRAPPLPPPPPAAAVASTPRSGRSRRGHASP 120 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 35,155,222 Number of extensions: 842940 Number of successful extensions: 3115 Number of sequences better than 10.0: 34 Number of HSP's gapped: 3076 Number of HSP's successfully gapped: 35 Length of query: 382 Length of database: 15,399,855 Length adjustment: 102 Effective length of query: 280 Effective length of database: 11,315,673 Effective search space: 3168388440 Effective search space used: 3168388440 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
