ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf30h13 |
|---|---|
| Clone Library Name | barley_pub |
>Q9NZD2:GLTP_HUMAN Glycolipid transfer protein - Homo sapiens (Human)| Length = 209 Score = 79.7 bits (195), Expect = 2e-14 Identities = 46/146 (31%), Positives = 76/146 (52%), Gaps = 8/146 (5%) Frame = +3 Query: 237 PFLDVCKQILPVLDKFGAAMAI-VKSDIGGNITRLENKYSSDPAKYEHLYTMVQEEVEKK 413 PFL+ + P D G+ + +K+DI GNIT+++ Y ++PAK+ L +++ E E Sbjct: 22 PFLEAVSHLPPFFDCLGSPVFTPIKADISGNITKIKAVYDTNPAKFRTLQNILEVEKEMY 81 Query: 414 TAKGSS-SCTNGLLWLTRAMDFLVELFRNLLD------HPDWTMSQACTDSYTKTLKKWH 572 A+ T L+WL R + F+ +++ D HP+ A T +Y LKK+H Sbjct: 82 GAEWPKVGATLALMWLKRGLRFIQVFLQSICDGERDENHPNLIRVNA-TKAYEMALKKYH 140 Query: 573 GWLASSSFTVAMKLAPNKDKFMEVIS 650 GW+ F A+ AP K F++ +S Sbjct: 141 GWIVQKIFQAALYAAPYKSDFLKALS 166
>Q9JL62:GLTP_MOUSE Glycolipid transfer protein - Mus musculus (Mouse)| Length = 209 Score = 78.6 bits (192), Expect = 5e-14 Identities = 47/146 (32%), Positives = 75/146 (51%), Gaps = 8/146 (5%) Frame = +3 Query: 237 PFLDVCKQILPVLDKFGAAMAI-VKSDIGGNITRLENKYSSDPAKYEHLYTMVQEEVEKK 413 PFL+ + P D G+ + +K+DI GNIT+++ Y +DPAK++ L +++ E Sbjct: 22 PFLEAVAHLPPFFDCLGSPVFTPIKADISGNITKIKAVYDTDPAKFKTLQNILEVEKGMY 81 Query: 414 TAKGSS-SCTNGLLWLTRAMDFLVELFRNLLD------HPDWTMSQACTDSYTKTLKKWH 572 A+ T LLWL R + F+ +++ D HP+ A +Y LKK+H Sbjct: 82 GAEWPKVGATLALLWLKRGLRFIQVFLQSICDGERDENHPNLIRVNA-NKAYEMALKKYH 140 Query: 573 GWLASSSFTVAMKLAPNKDKFMEVIS 650 GWL F A+ AP K F++ +S Sbjct: 141 GWLVQKIFKAALYAAPYKSDFLKALS 166
>P68266:GLTP_PIG Glycolipid transfer protein - Sus scrofa (Pig)| Length = 209 Score = 78.2 bits (191), Expect = 6e-14 Identities = 45/146 (30%), Positives = 75/146 (51%), Gaps = 8/146 (5%) Frame = +3 Query: 237 PFLDVCKQILPVLDKFGAAMAI-VKSDIGGNITRLENKYSSDPAKYEHLYTMVQEEVEKK 413 PFL+ + P D G+ + +K+DI GNIT+++ Y ++P K+ L +++ E E Sbjct: 22 PFLEAVSHLPPFFDCLGSPVFTPIKADISGNITKIKAVYDTNPTKFRTLQNILEVEKEMY 81 Query: 414 TAKGSS-SCTNGLLWLTRAMDFLVELFRNLLD------HPDWTMSQACTDSYTKTLKKWH 572 A+ T L+WL R + F+ +++ D HP+ A T +Y LKK+H Sbjct: 82 GAEWPKVGATLALMWLKRGLRFIQVFLQSICDGERDENHPNLIRVNA-TKAYEMALKKYH 140 Query: 573 GWLASSSFTVAMKLAPNKDKFMEVIS 650 GW+ F A+ AP K F++ +S Sbjct: 141 GWIVQKIFQAALYAAPYKSDFLKALS 166
>P68265:GLTP_BOVIN Glycolipid transfer protein - Bos taurus (Bovine)| Length = 209 Score = 78.2 bits (191), Expect = 6e-14 Identities = 45/146 (30%), Positives = 75/146 (51%), Gaps = 8/146 (5%) Frame = +3 Query: 237 PFLDVCKQILPVLDKFGAAMAI-VKSDIGGNITRLENKYSSDPAKYEHLYTMVQEEVEKK 413 PFL+ + P D G+ + +K+DI GNIT+++ Y ++P K+ L +++ E E Sbjct: 22 PFLEAVSHLPPFFDCLGSPVFTPIKADISGNITKIKAVYDTNPTKFRTLQNILEVEKEMY 81 Query: 414 TAKGSS-SCTNGLLWLTRAMDFLVELFRNLLD------HPDWTMSQACTDSYTKTLKKWH 572 A+ T L+WL R + F+ +++ D HP+ A T +Y LKK+H Sbjct: 82 GAEWPKVGATLALMWLKRGLRFIQVFLQSICDGERDENHPNLIRVNA-TKAYEMALKKYH 140 Query: 573 GWLASSSFTVAMKLAPNKDKFMEVIS 650 GW+ F A+ AP K F++ +S Sbjct: 141 GWIVQKIFQAALYAAPYKSDFLKALS 166
>A5DE68:FAL1_PICGU ATP-dependent RNA helicase FAL1 - Pichia guilliermondii (Yeast)| (Candida guilliermondii) Length = 397 Score = 35.0 bits (79), Expect = 0.58 Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 1/135 (0%) Frame = +3 Query: 204 VRSDSGVMLSKPFLDVCKQILPVLDKFGAAMAIVKSDIGGNITRLENKYSSDPAKYEHLY 383 V ++ +L+K F + +I L GA + +V + + + + NK++SDP K Sbjct: 171 VLDEADELLTKGFKEQIYEIYKTLPA-GAQVVVVSATLTPEVLEMTNKFTSDPVK----I 225 Query: 384 TMVQEEVEKKTAKGSSSCTNGLLWLTRAMDFLVELFRNLLDHPDWTMSQACTDSYTKTLK 563 + +++V K K W D L +L+ NL T++QA TK Sbjct: 226 LVKRDDVTLKGIKQYYIQCEKEDW---KFDTLCDLYDNL------TITQAVIFCNTKAKV 276 Query: 564 KW-HGWLASSSFTVA 605 W G + S+FTVA Sbjct: 277 NWLAGQMRKSNFTVA 291
>Q90502:TBFG_EPTST Thread biopolymer filament subunit gamma - Eptatretus stoutii| (Pacific hagfish) Length = 603 Score = 34.7 bits (78), Expect = 0.76 Identities = 26/138 (18%), Positives = 63/138 (45%), Gaps = 2/138 (1%) Frame = +3 Query: 186 LEGMNHVRSDSGVMLSKPFLDVCKQILPVLDKFGAAMAIVKSDIGGNITRLENKYSSDPA 365 ++G++ ++ +L K + K++ P+ ++ + ++ +G +T L+N+ S D Sbjct: 363 IQGISTQTTEQISILDKEINTLEKELQPLNVEYQRLLTTYQT-LGDRLTDLQNRESIDLV 421 Query: 366 KYEHLYTMVQEEVEKKTAKGSSSCT--NGLLWLTRAMDFLVELFRNLLDHPDWTMSQACT 539 ++++ YT ++E+E LL + A+D + ++ LL+ + + A Sbjct: 422 QFQNTYTRYEQEIEGNQVDLQRQLVTYQQLLDVKTALDAEIATYKKLLEGQELMVRTAMA 481 Query: 540 DSYTKTLKKWHGWLASSS 593 D + G L +S Sbjct: 482 DDFAHATVVRSGTLGGAS 499
>Q5HN96:PRSA_STAEQ Foldase protein prsA precursor - Staphylococcus epidermidis (strain| ATCC 35984 / RP62A) Length = 325 Score = 34.7 bits (78), Expect = 0.76 Identities = 34/136 (25%), Positives = 64/136 (47%), Gaps = 1/136 (0%) Frame = +3 Query: 9 SSSPTSHFLPC*IPPSADRQGLSPAVPSPKFAREKAKSTAVCEIVER*GEMAETVFSPCL 188 +S TSH L S+D++GLS K A+EKA+ E+ + + E + Sbjct: 140 NSKKTSHILIKVKSKSSDKEGLSD-----KKAKEKAEKIQK-EVEKNPNKFGEIAKKESM 193 Query: 189 EGMNHVRSDS-GVMLSKPFLDVCKQILPVLDKFGAAMAIVKSDIGGNITRLENKYSSDPA 365 + + + S G ++ +D ++ L L K G +VK+D G +I + + + + Sbjct: 194 DSSSAKKDGSLGYVIKGQMVDSFEKALFKL-KEGEVSKVVKTDYGYHIIKADKETDFNSE 252 Query: 366 KYEHLYTMVQEEVEKK 413 K +++E+V+KK Sbjct: 253 KSNIKQKLIEEKVQKK 268
>Q8CNR4:PRSA_STAES Foldase protein prsA precursor - Staphylococcus epidermidis (strain| ATCC 12228) Length = 325 Score = 32.7 bits (73), Expect = 2.9 Identities = 33/136 (24%), Positives = 63/136 (46%), Gaps = 1/136 (0%) Frame = +3 Query: 9 SSSPTSHFLPC*IPPSADRQGLSPAVPSPKFAREKAKSTAVCEIVER*GEMAETVFSPCL 188 +S SH L S+D++GLS K A+EKA+ E+ + + E + Sbjct: 140 NSKKASHILIKVKSKSSDKEGLSD-----KKAKEKAEKIQK-EVEKNPNKFGEIAKKESM 193 Query: 189 EGMNHVRSDS-GVMLSKPFLDVCKQILPVLDKFGAAMAIVKSDIGGNITRLENKYSSDPA 365 + + + S G ++ +D ++ L L K G +VK+D G +I + + + + Sbjct: 194 DSSSAKKDGSLGYVIKGQMVDSFEKALFKL-KEGEVSKVVKTDYGYHIIKADKETDFNSE 252 Query: 366 KYEHLYTMVQEEVEKK 413 K +++E+V+KK Sbjct: 253 KSNIKQKLIEEKVQKK 268
>Q92087:CP19A_ORYLA Cytochrome P450 19A1 - Oryzias latipes (Medaka fish) (Japanese| ricefish) Length = 518 Score = 31.2 bits (69), Expect = 8.4 Identities = 14/44 (31%), Positives = 30/44 (68%), Gaps = 1/44 (2%) Frame = -3 Query: 340 SNLVIFPPI-SLFTIAIAAPNLSKTGKICLQTSRKGLDSMTPLS 212 +N+ ++ I + FT A+ PNL +T ++C+ +++ LD+++ LS Sbjct: 150 NNVALWKKIRTYFTKALTGPNLQQTVEVCVTSTQTHLDNLSSLS 193 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 213,185,705 Number of extensions: 4827064 Number of successful extensions: 13794 Number of sequences better than 10.0: 9 Number of HSP's gapped: 13748 Number of HSP's successfully gapped: 9 Length of query: 382 Length of database: 100,686,439 Length adjustment: 115 Effective length of query: 267 Effective length of database: 69,142,514 Effective search space: 18461051238 Effective search space used: 18461051238 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
