| Clone Name | FLbaf33f16 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CR392037.10| Zebrafish DNA sequence from clone CH211-244O22 in linkage group 5, complete sequence Length = 140415 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Minus Query: 23 ttgctgatagatttgtttctagctat 48 ||||||||||||||||||||| |||| Sbjct: 61897 ttgctgatagatttgtttctatctat 61872
>emb|BX119909.5| Zebrafish DNA sequence from clone CH211-223I3 in linkage group 6, complete sequence Length = 221755 Score = 42.1 bits (21), Expect = 0.64 Identities = 21/21 (100%) Strand = Plus / Plus Query: 20 atgttgctgatagatttgttt 40 ||||||||||||||||||||| Sbjct: 123193 atgttgctgatagatttgttt 123213
>gb|DQ156150.1| Salmo salar BAC S0188I22, partial sequence Length = 203947 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 ttctagctatatatagtgtt 58 |||||||||||||||||||| Sbjct: 101867 ttctagctatatatagtgtt 101886
>gb|AC109157.10| Mus musculus chromosome 7, clone RP24-169M16, complete sequence Length = 164968 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 attaaaaggctaataatcag 142 |||||||||||||||||||| Sbjct: 163584 attaaaaggctaataatcag 163603
>gb|AC007321.2| Homo sapiens BAC clone RP11-507C1 from 7, complete sequence Length = 158770 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tgttgctgatagatttgttt 40 |||||||||||||||||||| Sbjct: 43465 tgttgctgatagatttgttt 43446
>gb|AC160553.7| Mus musculus chromosome 7, clone RP23-334C12, complete sequence Length = 191999 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 attaaaaggctaataatcag 142 |||||||||||||||||||| Sbjct: 91382 attaaaaggctaataatcag 91401
>gb|AC146192.2| Pan troglodytes BAC clone RP43-35D13 from 7, complete sequence Length = 178260 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tgttgctgatagatttgttt 40 |||||||||||||||||||| Sbjct: 63143 tgttgctgatagatttgttt 63124
>emb|AL390247.11| Human DNA sequence from clone RP11-778A10 on chromosome 6, complete sequence Length = 161241 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 tttgattaaaaggctaataatcag 142 |||| ||||||||||||||||||| Sbjct: 85718 tttggttaaaaggctaataatcag 85741
>emb|AL353660.11| Human DNA sequence from clone RP11-459P23 on chromosome 13 Contains a novel gene, complete sequence Length = 129241 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 gctgtgtaaatatatttgtt 161 |||||||||||||||||||| Sbjct: 121270 gctgtgtaaatatatttgtt 121251
>emb|CR751235.5| Zebrafish DNA sequence from clone CH211-240J22 in linkage group 4, complete sequence Length = 104632 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 ggctaataatcagctgtgta 149 |||||||||||||||||||| Sbjct: 45355 ggctaataatcagctgtgta 45374
>gb|AE000783.1| Borrelia burgdorferi B31, complete genome Length = 910724 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 atcaatgttgctgatagatt 35 |||||||||||||||||||| Sbjct: 572173 atcaatgttgctgatagatt 572192
>emb|BX571839.8| Zebrafish DNA sequence from clone DKEY-259P7 in linkage group 16, complete sequence Length = 168648 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 tgtgtaaatatatttgtttg 163 |||||||||||||||||||| Sbjct: 74597 tgtgtaaatatatttgtttg 74616
>emb|BX005472.11| Zebrafish DNA sequence from clone CH211-119C22 in linkage group 11, complete sequence Length = 158170 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 taaatatatttgtttggaaa 167 |||||||||||||||||||| Sbjct: 25001 taaatatatttgtttggaaa 25020
>gb|L32145.1|BORHTPG Borrelia burgdorferi C62.5 heat shock protein (htpG) gene, partial cds Length = 236 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 atcaatgttgctgatagatt 35 |||||||||||||||||||| Sbjct: 80 atcaatgttgctgatagatt 61
>gb|U51878.1|BBU51878 Borrelia burgdorferi phosphotransferase enzyme II (crr) gene, hsp90 (hptg) gene, complete cds Length = 2732 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 atcaatgttgctgatagatt 35 |||||||||||||||||||| Sbjct: 928 atcaatgttgctgatagatt 947 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 40,197,765 Number of extensions: 2007925 Number of successful extensions: 159776 Number of sequences better than 10.0: 15 Number of HSP's gapped: 159776 Number of HSP's successfully gapped: 15 Length of query: 187 Length of database: 18,610,659,111 Length adjustment: 21 Effective length of query: 166 Effective length of database: 18,513,255,126 Effective search space: 3073200350916 Effective search space used: 3073200350916 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 13 (26.3 bits)