| Clone Name | FLbaf33e06 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK072399:Os01g0588800 | 785 | 0.0 | 2 | AK106376:Os04g0559400 | 35 | 0.17 | 3 | AK106496:Os03g0764300 | 33 | 0.50 | 4 | AK103184:Os03g0764300 | 33 | 0.50 | 5 | AK068541:Os03g0764300 | 33 | 0.50 | 6 | Os04g0489400:Os04g0489400 | 32 | 1.9 | 7 | AK101821: | 31 | 3.2 | 8 | AK120638:Os03g0698800 | 27 | 6.5 | 9 | AK063164:Os04g0290400 | 29 | 9.4 |
|---|
>AK072399:Os01g0588800 | Length = 504 Score = 785 bits (2026), Expect = 0.0 Identities = 384/439 (87%), Positives = 411/439 (93%), Gaps = 1/439 (0%) Frame = +1 Query: 226 DEAEDDKLQGPSSDSGPRLSISVDRAGLYNPQEHSHEAPLDSDLVKHLKSIIKFRSGPIS 405 D A D + S + G LSI++DR+GLYNP EHSHE DS+LVKHLKSIIKFRSGPIS Sbjct: 66 DAAADGDNRAESGEPGSSLSITIDRSGLYNPPEHSHEPSSDSELVKHLKSIIKFRSGPIS 125 Query: 406 VAEYMEEVLTNPQSGYYMNRDVFGESGDFITSPEVSQMFGELIGVWAMCLWEQMGQPEKV 585 VAEYMEEVLTNPQSG+Y+NRDVFG SGDFITSPEVSQMFGE+ GVWAMCLWEQMGQPEKV Sbjct: 126 VAEYMEEVLTNPQSGFYINRDVFGTSGDFITSPEVSQMFGEMTGVWAMCLWEQMGQPEKV 185 Query: 586 NLIELGPGRGTLLADLLRGSAKFVNFTKALNINLVECSPTLQKVQYNTLKCEDESVGDEK 765 NLIELGPGRGTLLADLLRGS+KFVNFTKALNINLVECSPTLQKVQYNTLKCEDE +GD+ Sbjct: 186 NLIELGPGRGTLLADLLRGSSKFVNFTKALNINLVECSPTLQKVQYNTLKCEDEPIGDKT 245 Query: 766 RTVSKLCGAPVYWHASLEQVPSGLPTIIVAHEFLDALPIHQFQKGSRGWCEKMVDLAGDS 945 RTVSKLCGAPV+WHASLEQVPSGLPTII+AHEF DALPIHQFQK SRGWCEKMVDLA DS Sbjct: 246 RTVSKLCGAPVHWHASLEQVPSGLPTIIIAHEFYDALPIHQFQKASRGWCEKMVDLAEDS 305 Query: 946 SFRFVLSPQPTASLIFLSKRCQWASPEELEKVDQIEVCPKAMEISEQIADRISSDGGGAL 1125 SFRFVLSPQPTASL+FLSKRC WAS EELEKV+ IEVCPKAMEI+EQIADRISSDGGGAL Sbjct: 306 SFRFVLSPQPTASLLFLSKRCGWASSEELEKVEHIEVCPKAMEITEQIADRISSDGGGAL 365 Query: 1126 IIDYGKNGIVSDSLQAIRKHKFVHILDDPGSADLSAYVDFAAIKHSAKEASDDISVHGPM 1305 IIDYGK+GIVSDSLQAIRKHKFVHILD+PGSADLSAYVDFA+I+HSAKEASDDISVHGPM Sbjct: 366 IIDYGKDGIVSDSLQAIRKHKFVHILDNPGSADLSAYVDFASIRHSAKEASDDISVHGPM 425 Query: 1306 TQSQLLGSLGINFRVEALMQNC-DEKQAESLRTGYWRLVGDGEAPFWEGPDEQTPIGMGS 1482 TQSQ LGSLGINFRVEAL+QNC ++QAESLRTGYWRLVGDGEAPFWEGPD+QTPIGMG+ Sbjct: 426 TQSQFLGSLGINFRVEALLQNCATDEQAESLRTGYWRLVGDGEAPFWEGPDDQTPIGMGT 485 Query: 1483 RYLAMAIVNKKQGSPVPFE 1539 RYLAMAIVNKKQG+PVPFE Sbjct: 486 RYLAMAIVNKKQGTPVPFE 504
>AK106376:Os04g0559400 | Length = 410 Score = 35.0 bits (79), Expect = 0.17 Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 4/38 (10%) Frame = -2 Query: 1484 LLPMPIGVCSSGPSQNGASPSPTRR----Q*PVLRDSA 1383 LLP +GV + GP + GASPSPTRR P+L+ SA Sbjct: 3 LLPR-VGVAAPGPGRGGASPSPTRRHRAPSHPILKRSA 39
>AK106496:Os03g0764300 | Length = 424 Score = 33.5 bits (75), Expect = 0.50 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 6/47 (12%) Frame = +2 Query: 5 YSLSPRCVSPSRCFGAQ------PPLCSATCPLASPAAVLEPVHPRV 127 Y SPRC SP + G+Q PL S +P+A P+HP++ Sbjct: 290 YGSSPRCASPEKIMGSQERSPRSSPLRSPVLRSKNPSAPPSPMHPKL 336
>AK103184:Os03g0764300 | Length = 777 Score = 33.5 bits (75), Expect = 0.50 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 6/47 (12%) Frame = +2 Query: 5 YSLSPRCVSPSRCFGAQ------PPLCSATCPLASPAAVLEPVHPRV 127 Y SPRC SP + G+Q PL S +P+A P+HP++ Sbjct: 290 YGSSPRCASPEKIMGSQERSPRSSPLRSPVLRSKNPSAPPSPMHPKL 336
>AK068541:Os03g0764300 | Length = 777 Score = 33.5 bits (75), Expect = 0.50 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 6/47 (12%) Frame = +2 Query: 5 YSLSPRCVSPSRCFGAQ------PPLCSATCPLASPAAVLEPVHPRV 127 Y SPRC SP + G+Q PL S +P+A P+HP++ Sbjct: 290 YGSSPRCASPEKIMGSQERSPRSSPLRSPVLRSKNPSAPPSPMHPKL 336
>Os04g0489400:Os04g0489400 | Length = 429 Score = 31.6 bits (70), Expect = 1.9 Identities = 45/179 (25%), Positives = 74/179 (41%), Gaps = 22/179 (12%) Frame = +1 Query: 736 CEDESVGD--EKRTVSKLCGAPVYWHASLEQV----------PSGLPTIIVAHEFLDALP 879 C D+S+ + +K SK + H + EQ P + T V H A Sbjct: 89 CSDQSMLEMFDKNMTSKEISMLIQIHKNNEQAVVLPLADWPTPKKVKTNSVPHSCSSARR 148 Query: 880 IHQFQKGSRGW-CEKMVD-LAGDSSF------RFVLSPQPTASLIFLSKRCQWASPEELE 1035 + + S+ W CEK+ D L D++ R +L T ++ KR + +E Sbjct: 149 SEKIKPASKAWICEKVKDWLLEDATVGAKELQRRILE---THKVLINYKR------KHIE 199 Query: 1036 KVDQIEVCPKAMEISEQIADRI--SSDGGGALIIDYGKNGIVSDSLQAIRKHKFVHILD 1206 K+D+ + P+AM + R+ S G +DY N + IR HK +H++D Sbjct: 200 KMDEAK--PEAMAYLRKNHVRLWTRSQFSGQCKVDYVTNNLAECFNSWIRPHKGLHLVD 256
>AK101821: | Length = 310 Score = 30.8 bits (68), Expect = 3.2 Identities = 32/116 (27%), Positives = 41/116 (35%), Gaps = 6/116 (5%) Frame = -2 Query: 872 ASRNSWATIMVGNPEGTCSREACQ*TGAPQSLLTVLFSSPTDSSSHFRVLYCTFCSVGLH 693 +SR WA GNP+ R C P + SSS R L T CS Sbjct: 181 SSRLRWARRRPGNPKPATRRRRC-----PDRVSKAAVRPLRRSSSSSRCLCATSCSAPAA 235 Query: 692 STKLMLSALVKLTNFADPR------SKSAKRVPRPGPSSIKFTFSGCPICSHRHIA 543 T + + ++ A PR S+S R PR S+ F S R A Sbjct: 236 PTNASGPSSLSTSHAAPPRTASSPTSRSTSRRPRSACSTGVSAFPSSLFASARSTA 291
>AK120638:Os03g0698800 | Length = 764 Score = 27.3 bits (59), Expect(2) = 6.5 Identities = 12/18 (66%), Positives = 15/18 (83%) Frame = +2 Query: 476 ANLGISSPHQRSARCLES 529 A+LGISSP + S RC+ES Sbjct: 585 ASLGISSPGRMSPRCVES 602 Score = 20.8 bits (42), Expect(2) = 6.5 Identities = 16/68 (23%), Positives = 24/68 (35%) Frame = +1 Query: 637 RGSAKFVNFTKALNINLVECSPTLQKVQYNTLKCEDESVGDEKRTVSKLCGAPVYWHASL 816 R S + V +N +L +K Q +G S + G+P+ S Sbjct: 594 RMSPRCVESGSPMNSHLAAALAQREKQQQTMRSLSSRDLGPSAARASGVVGSPLSSSWSK 653 Query: 817 EQVPSGLP 840 PSG P Sbjct: 654 WGSPSGTP 661
>AK063164:Os04g0290400 | Length = 142 Score = 29.3 bits (64), Expect = 9.4 Identities = 14/42 (33%), Positives = 17/42 (40%) Frame = +3 Query: 516 DVWRADWCVGDVSVGANGATREGEFD*AWPRTRNSLGRFTSW 641 + WR WC G+ + GA R AW R R G W Sbjct: 38 NTWRRRWCGGEAARWCGGAWRR-RLSGAWQRRRRCGGEAARW 78 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 53,245,020 Number of extensions: 1261173 Number of successful extensions: 3418 Number of sequences better than 10.0: 9 Number of HSP's gapped: 3416 Number of HSP's successfully gapped: 10 Length of query: 593 Length of database: 15,399,855 Length adjustment: 106 Effective length of query: 487 Effective length of database: 11,155,509 Effective search space: 5432732883 Effective search space used: 5432732883 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)