ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf33e06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK072399:Os01g0588800 785 0.0
2AK106376:Os04g0559400 35 0.17
3AK106496:Os03g0764300 33 0.50
4AK103184:Os03g0764300 33 0.50
5AK068541:Os03g0764300 33 0.50
6Os04g0489400:Os04g0489400 32 1.9
7AK101821: 31 3.2
8AK120638:Os03g0698800 27 6.5
9AK063164:Os04g0290400 29 9.4

>AK072399:Os01g0588800 |
          Length = 504
 Score =  785 bits (2026), Expect = 0.0
 Identities = 384/439 (87%), Positives = 411/439 (93%), Gaps = 1/439 (0%)
 Frame = +1

Query: 226  DEAEDDKLQGPSSDSGPRLSISVDRAGLYNPQEHSHEAPLDSDLVKHLKSIIKFRSGPIS 405
            D A D   +  S + G  LSI++DR+GLYNP EHSHE   DS+LVKHLKSIIKFRSGPIS
Sbjct: 66   DAAADGDNRAESGEPGSSLSITIDRSGLYNPPEHSHEPSSDSELVKHLKSIIKFRSGPIS 125

Query: 406  VAEYMEEVLTNPQSGYYMNRDVFGESGDFITSPEVSQMFGELIGVWAMCLWEQMGQPEKV 585
            VAEYMEEVLTNPQSG+Y+NRDVFG SGDFITSPEVSQMFGE+ GVWAMCLWEQMGQPEKV
Sbjct: 126  VAEYMEEVLTNPQSGFYINRDVFGTSGDFITSPEVSQMFGEMTGVWAMCLWEQMGQPEKV 185

Query: 586  NLIELGPGRGTLLADLLRGSAKFVNFTKALNINLVECSPTLQKVQYNTLKCEDESVGDEK 765
            NLIELGPGRGTLLADLLRGS+KFVNFTKALNINLVECSPTLQKVQYNTLKCEDE +GD+ 
Sbjct: 186  NLIELGPGRGTLLADLLRGSSKFVNFTKALNINLVECSPTLQKVQYNTLKCEDEPIGDKT 245

Query: 766  RTVSKLCGAPVYWHASLEQVPSGLPTIIVAHEFLDALPIHQFQKGSRGWCEKMVDLAGDS 945
            RTVSKLCGAPV+WHASLEQVPSGLPTII+AHEF DALPIHQFQK SRGWCEKMVDLA DS
Sbjct: 246  RTVSKLCGAPVHWHASLEQVPSGLPTIIIAHEFYDALPIHQFQKASRGWCEKMVDLAEDS 305

Query: 946  SFRFVLSPQPTASLIFLSKRCQWASPEELEKVDQIEVCPKAMEISEQIADRISSDGGGAL 1125
            SFRFVLSPQPTASL+FLSKRC WAS EELEKV+ IEVCPKAMEI+EQIADRISSDGGGAL
Sbjct: 306  SFRFVLSPQPTASLLFLSKRCGWASSEELEKVEHIEVCPKAMEITEQIADRISSDGGGAL 365

Query: 1126 IIDYGKNGIVSDSLQAIRKHKFVHILDDPGSADLSAYVDFAAIKHSAKEASDDISVHGPM 1305
            IIDYGK+GIVSDSLQAIRKHKFVHILD+PGSADLSAYVDFA+I+HSAKEASDDISVHGPM
Sbjct: 366  IIDYGKDGIVSDSLQAIRKHKFVHILDNPGSADLSAYVDFASIRHSAKEASDDISVHGPM 425

Query: 1306 TQSQLLGSLGINFRVEALMQNC-DEKQAESLRTGYWRLVGDGEAPFWEGPDEQTPIGMGS 1482
            TQSQ LGSLGINFRVEAL+QNC  ++QAESLRTGYWRLVGDGEAPFWEGPD+QTPIGMG+
Sbjct: 426  TQSQFLGSLGINFRVEALLQNCATDEQAESLRTGYWRLVGDGEAPFWEGPDDQTPIGMGT 485

Query: 1483 RYLAMAIVNKKQGSPVPFE 1539
            RYLAMAIVNKKQG+PVPFE
Sbjct: 486  RYLAMAIVNKKQGTPVPFE 504



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>AK106376:Os04g0559400 |
          Length = 410

 Score = 35.0 bits (79), Expect = 0.17
 Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 4/38 (10%)
 Frame = -2

Query: 1484 LLPMPIGVCSSGPSQNGASPSPTRR----Q*PVLRDSA 1383
            LLP  +GV + GP + GASPSPTRR      P+L+ SA
Sbjct: 3    LLPR-VGVAAPGPGRGGASPSPTRRHRAPSHPILKRSA 39



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>AK106496:Os03g0764300 |
          Length = 424

 Score = 33.5 bits (75), Expect = 0.50
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 6/47 (12%)
 Frame = +2

Query: 5   YSLSPRCVSPSRCFGAQ------PPLCSATCPLASPAAVLEPVHPRV 127
           Y  SPRC SP +  G+Q       PL S      +P+A   P+HP++
Sbjct: 290 YGSSPRCASPEKIMGSQERSPRSSPLRSPVLRSKNPSAPPSPMHPKL 336



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>AK103184:Os03g0764300 |
          Length = 777

 Score = 33.5 bits (75), Expect = 0.50
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 6/47 (12%)
 Frame = +2

Query: 5   YSLSPRCVSPSRCFGAQ------PPLCSATCPLASPAAVLEPVHPRV 127
           Y  SPRC SP +  G+Q       PL S      +P+A   P+HP++
Sbjct: 290 YGSSPRCASPEKIMGSQERSPRSSPLRSPVLRSKNPSAPPSPMHPKL 336



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>AK068541:Os03g0764300 |
          Length = 777

 Score = 33.5 bits (75), Expect = 0.50
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 6/47 (12%)
 Frame = +2

Query: 5   YSLSPRCVSPSRCFGAQ------PPLCSATCPLASPAAVLEPVHPRV 127
           Y  SPRC SP +  G+Q       PL S      +P+A   P+HP++
Sbjct: 290 YGSSPRCASPEKIMGSQERSPRSSPLRSPVLRSKNPSAPPSPMHPKL 336



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>Os04g0489400:Os04g0489400 |
          Length = 429

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 45/179 (25%), Positives = 74/179 (41%), Gaps = 22/179 (12%)
 Frame = +1

Query: 736  CEDESVGD--EKRTVSKLCGAPVYWHASLEQV----------PSGLPTIIVAHEFLDALP 879
            C D+S+ +  +K   SK     +  H + EQ           P  + T  V H    A  
Sbjct: 89   CSDQSMLEMFDKNMTSKEISMLIQIHKNNEQAVVLPLADWPTPKKVKTNSVPHSCSSARR 148

Query: 880  IHQFQKGSRGW-CEKMVD-LAGDSSF------RFVLSPQPTASLIFLSKRCQWASPEELE 1035
              + +  S+ W CEK+ D L  D++       R +L    T  ++   KR      + +E
Sbjct: 149  SEKIKPASKAWICEKVKDWLLEDATVGAKELQRRILE---THKVLINYKR------KHIE 199

Query: 1036 KVDQIEVCPKAMEISEQIADRI--SSDGGGALIIDYGKNGIVSDSLQAIRKHKFVHILD 1206
            K+D+ +  P+AM    +   R+   S   G   +DY  N +       IR HK +H++D
Sbjct: 200  KMDEAK--PEAMAYLRKNHVRLWTRSQFSGQCKVDYVTNNLAECFNSWIRPHKGLHLVD 256



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>AK101821: |
          Length = 310

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 32/116 (27%), Positives = 41/116 (35%), Gaps = 6/116 (5%)
 Frame = -2

Query: 872 ASRNSWATIMVGNPEGTCSREACQ*TGAPQSLLTVLFSSPTDSSSHFRVLYCTFCSVGLH 693
           +SR  WA    GNP+    R  C     P  +          SSS  R L  T CS    
Sbjct: 181 SSRLRWARRRPGNPKPATRRRRC-----PDRVSKAAVRPLRRSSSSSRCLCATSCSAPAA 235

Query: 692 STKLMLSALVKLTNFADPR------SKSAKRVPRPGPSSIKFTFSGCPICSHRHIA 543
            T     + +  ++ A PR      S+S  R PR   S+    F      S R  A
Sbjct: 236 PTNASGPSSLSTSHAAPPRTASSPTSRSTSRRPRSACSTGVSAFPSSLFASARSTA 291



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>AK120638:Os03g0698800 |
          Length = 764

 Score = 27.3 bits (59), Expect(2) = 6.5
 Identities = 12/18 (66%), Positives = 15/18 (83%)
 Frame = +2

Query: 476 ANLGISSPHQRSARCLES 529
           A+LGISSP + S RC+ES
Sbjct: 585 ASLGISSPGRMSPRCVES 602



 Score = 20.8 bits (42), Expect(2) = 6.5
 Identities = 16/68 (23%), Positives = 24/68 (35%)
 Frame = +1

Query: 637 RGSAKFVNFTKALNINLVECSPTLQKVQYNTLKCEDESVGDEKRTVSKLCGAPVYWHASL 816
           R S + V     +N +L       +K Q          +G      S + G+P+    S 
Sbjct: 594 RMSPRCVESGSPMNSHLAAALAQREKQQQTMRSLSSRDLGPSAARASGVVGSPLSSSWSK 653

Query: 817 EQVPSGLP 840
              PSG P
Sbjct: 654 WGSPSGTP 661



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>AK063164:Os04g0290400 |
          Length = 142

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 14/42 (33%), Positives = 17/42 (40%)
 Frame = +3

Query: 516 DVWRADWCVGDVSVGANGATREGEFD*AWPRTRNSLGRFTSW 641
           + WR  WC G+ +    GA R      AW R R   G    W
Sbjct: 38  NTWRRRWCGGEAARWCGGAWRR-RLSGAWQRRRRCGGEAARW 78


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 53,245,020
Number of extensions: 1261173
Number of successful extensions: 3418
Number of sequences better than 10.0: 9
Number of HSP's gapped: 3416
Number of HSP's successfully gapped: 10
Length of query: 593
Length of database: 15,399,855
Length adjustment: 106
Effective length of query: 487
Effective length of database: 11,155,509
Effective search space: 5432732883
Effective search space used: 5432732883
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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