| Clone Name | FLbaf33e06 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001049973.1| Oryza sativa (japonica cultivar-group) Os01g0588800 (Os01g0588800) mRNA, complete cds Length = 2145 Score = 1154 bits (582), Expect = 0.0 Identities = 1084/1249 (86%), Gaps = 3/1249 (0%) Strand = Plus / Plus Query: 295 gaccgcgccggtctatacaacccccaagagcactcgcatgaggcgccgttggactctgac 354 |||||| |||| || ||||| |||| |||||||||||| ||| || ||| ||| || || Sbjct: 293 gaccgctccggcctgtacaatcccccagagcactcgcacgagccgtcgtcggattccgag 352 Query: 355 cttgtgaagcaccttaagagcatcataaagttccggagtggaccgataagcgtagctgag 414 || ||||||||||| |||||||||||||||||||| || || || || |||||||| ||| Sbjct: 353 ctagtgaagcacctcaagagcatcataaagttccgcagcgggcctatcagcgtagccgag 412 Query: 415 tacatggaggaggtgcttacaaacccacagtctgggtactacatgaatcgcgatgtgttt 474 ||||||||||||||||| || ||||| ||||| |||| |||||| || ||||| ||||| Sbjct: 413 tacatggaggaggtgctgacgaacccgcagtcagggttctacatcaaccgcgacgtgttc 472 Query: 475 ggcgaatctggggatttcatcacctcaccagaggtcagccagatgtttggagagctgatt 534 || ||| ||||||||||||||||| || ||||||||||| |||||||||||| ||| | Sbjct: 473 gggacatccggggatttcatcacctcgccggaggtcagccaaatgtttggagagatgact 532 Query: 535 ggtgtgtgggcgatgtgtctgtgggagcaaatggggcaaccagagaaggtgaatttgatt 594 ||||||||||| ||||| || ||||||||||||||||| |||||||| || ||| ||||| Sbjct: 533 ggtgtgtgggcaatgtgcctctgggagcaaatggggcagccagagaaagtcaatctgatt 592 Query: 595 gagcttggcccaggacgaggaactctcttggcagatttacttcgtgggtcagcaaagttt 654 |||||||| ||||| || ||||||||||||||||||||||||||||||||| |||| ||| Sbjct: 593 gagcttggtccagggcgcggaactctcttggcagatttacttcgtgggtcatcaaaattt 652 Query: 655 gttaatttcactaaggcgctcaacattaacttggtagaatgtagccctacactacaaaag 714 ||||||||||| || || ||||||||||||||||||||||||||||| || |||||||| Sbjct: 653 gttaatttcaccaaagcactcaacattaacttggtagaatgtagccccacgttacaaaag 712 Query: 715 gtgcagtacaatactctgaaatgtgaagatgaatctgttggtgatgaaaaaaggacagtt 774 ||||| |||||||||||||||||||||||||| | |||| ||| ||| |||||||||| Sbjct: 713 gtgcaatacaatactctgaaatgtgaagatgagcccattggcgataaaacaaggacagtt 772 Query: 775 agcaagctttgtggagcccctgtttattggcacgcctccctcgagcaggttccttcagga 834 ||||||||||||||||||||||| | ||||| || ||||| || ||||||||||||||| Sbjct: 773 agcaagctttgtggagcccctgtacactggcatgcttcccttgaacaggttccttcagga 832 Query: 835 ttgcccaccataattgttgcccatgaattccttgatgctttgccgatccatcaatttcag 894 ||||| || |||||| |||| ||||||||| |||||| ||||| || |||||||||||| Sbjct: 833 ttgccaactataattattgcacatgaattctatgatgccttgccaattcatcaatttcag 892 Query: 895 aaagggtcacgcggctggtgtgaaaagatggtggatctcgcaggagactcatcgtttcgc 954 |||| ||||| |||||||| || |||||||||||||| |||| |||||||||||||||| Sbjct: 893 aaagcatcacgtggctggtgcgagaagatggtggatcttgcagaagactcatcgtttcgc 952 Query: 955 tttgttctgtctccgcagcctacagcctctttaattttcctctccaaacgttgtcaatgg 1014 |||||||| ||||| |||||||||||||||||| ||||||| ||||| || || ||| Sbjct: 953 tttgttctatctccacagcctacagcctctttacttttcctttccaagcggtgcggttgg 1012 Query: 1015 gctagtcctgaggagcttgagaaggttgatcagattgaagtctgcccgaaagctatggag 1074 |||||| ||||||| |||||||| ||||| || |||||||||||||||||||| |||||| Sbjct: 1013 gctagttctgaggaacttgagaaagttgagcatattgaagtctgcccgaaagcaatggag 1072 Query: 1075 atcagcgaacaaatcgcagacagaattagctcagatggtggaggtgctctgatcattgac 1134 |||| ||||| || ||||| ||||||||||| ||||| || ||||| || ||||||||| Sbjct: 1073 atcactgaacagattgcagatagaattagctcggatggagggggtgcacttatcattgac 1132 Query: 1135 tatggcaaaaatggaatagtgtctgatagtcttcaggcaatccgcaaacacaaattcgtt 1194 || || ||| |||||||||| |||||||||||||||||||||||||| ||||| || || Sbjct: 1133 tacggaaaagatggaatagtctctgatagtcttcaggcaatccgcaagcacaagtttgta 1192 Query: 1195 cacatcttagacgaccctgggtctgctgatctcagtgcctatgttgattttgctgcaatc 1254 ||||| || || ||||||| || || ||||| ||||| |||||||||||||| ||||| Sbjct: 1193 cacatattggataaccctggttcagccgatctgagtgcttatgttgattttgcatcaatc 1252 Query: 1255 aagcactctgccaaggaagcctcagatgatatttctgtccatggaccaatgactcaatcc 1314 | ||||| || |||||||| ||||||||||||||||| ||||| ||||||||||||||| Sbjct: 1253 agacactccgctaaggaagcttcagatgatatttctgttcatgggccaatgactcaatcc 1312 Query: 1315 cagttattgggttctcttggtatcaacttccgggtggaagcccttatgcaaaac--tgcg 1372 ||||| ||||| ||||||||||| |||||||| ||||||||||| | |||||| ||| Sbjct: 1313 cagttcttgggctctcttggtataaacttccgtgtggaagccctgctccaaaactgtgct 1372 Query: 1373 ac-gagaagcaggccgagtctctgaggacaggctactggcgtctagtcggagacggagaa 1431 || || ||||||||||||||||||||||||||||||||||||| |||||||| || ||| Sbjct: 1373 actgatgagcaggccgagtctctgaggacaggctactggcgtcttgtcggagatggtgaa 1432 Query: 1432 gccccattctgggaagggcctgatgaacaaacgcctattggcatgggcagtaggtacctg 1491 ||||||||||||||||| ||||| || ||||| || ||||||||||| | ||||||| || Sbjct: 1433 gccccattctgggaaggtcctgacgaccaaaccccaattggcatgggtactaggtacttg 1492 Query: 1492 gccatggccattgtcaacaagaagcaaggctcacctgttccattcgagt 1540 |||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 1493 gccatggccattgtcaacaagaagcaaggcacacccgttccattcgagt 1541 Score = 50.1 bits (25), Expect = 0.028 Identities = 31/33 (93%) Strand = Plus / Plus Query: 30 cgccgtcgagatgcttcggagcccagccgccgc 62 ||||||||||||| |||||||||| |||||||| Sbjct: 19 cgccgtcgagatgtttcggagcccggccgccgc 51
>dbj|AK072399.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023080H11, full insert sequence Length = 2147 Score = 1154 bits (582), Expect = 0.0 Identities = 1084/1249 (86%), Gaps = 3/1249 (0%) Strand = Plus / Plus Query: 295 gaccgcgccggtctatacaacccccaagagcactcgcatgaggcgccgttggactctgac 354 |||||| |||| || ||||| |||| |||||||||||| ||| || ||| ||| || || Sbjct: 295 gaccgctccggcctgtacaatcccccagagcactcgcacgagccgtcgtcggattccgag 354 Query: 355 cttgtgaagcaccttaagagcatcataaagttccggagtggaccgataagcgtagctgag 414 || ||||||||||| |||||||||||||||||||| || || || || |||||||| ||| Sbjct: 355 ctagtgaagcacctcaagagcatcataaagttccgcagcgggcctatcagcgtagccgag 414 Query: 415 tacatggaggaggtgcttacaaacccacagtctgggtactacatgaatcgcgatgtgttt 474 ||||||||||||||||| || ||||| ||||| |||| |||||| || ||||| ||||| Sbjct: 415 tacatggaggaggtgctgacgaacccgcagtcagggttctacatcaaccgcgacgtgttc 474 Query: 475 ggcgaatctggggatttcatcacctcaccagaggtcagccagatgtttggagagctgatt 534 || ||| ||||||||||||||||| || ||||||||||| |||||||||||| ||| | Sbjct: 475 gggacatccggggatttcatcacctcgccggaggtcagccaaatgtttggagagatgact 534 Query: 535 ggtgtgtgggcgatgtgtctgtgggagcaaatggggcaaccagagaaggtgaatttgatt 594 ||||||||||| ||||| || ||||||||||||||||| |||||||| || ||| ||||| Sbjct: 535 ggtgtgtgggcaatgtgcctctgggagcaaatggggcagccagagaaagtcaatctgatt 594 Query: 595 gagcttggcccaggacgaggaactctcttggcagatttacttcgtgggtcagcaaagttt 654 |||||||| ||||| || ||||||||||||||||||||||||||||||||| |||| ||| Sbjct: 595 gagcttggtccagggcgcggaactctcttggcagatttacttcgtgggtcatcaaaattt 654 Query: 655 gttaatttcactaaggcgctcaacattaacttggtagaatgtagccctacactacaaaag 714 ||||||||||| || || ||||||||||||||||||||||||||||| || |||||||| Sbjct: 655 gttaatttcaccaaagcactcaacattaacttggtagaatgtagccccacgttacaaaag 714 Query: 715 gtgcagtacaatactctgaaatgtgaagatgaatctgttggtgatgaaaaaaggacagtt 774 ||||| |||||||||||||||||||||||||| | |||| ||| ||| |||||||||| Sbjct: 715 gtgcaatacaatactctgaaatgtgaagatgagcccattggcgataaaacaaggacagtt 774 Query: 775 agcaagctttgtggagcccctgtttattggcacgcctccctcgagcaggttccttcagga 834 ||||||||||||||||||||||| | ||||| || ||||| || ||||||||||||||| Sbjct: 775 agcaagctttgtggagcccctgtacactggcatgcttcccttgaacaggttccttcagga 834 Query: 835 ttgcccaccataattgttgcccatgaattccttgatgctttgccgatccatcaatttcag 894 ||||| || |||||| |||| ||||||||| |||||| ||||| || |||||||||||| Sbjct: 835 ttgccaactataattattgcacatgaattctatgatgccttgccaattcatcaatttcag 894 Query: 895 aaagggtcacgcggctggtgtgaaaagatggtggatctcgcaggagactcatcgtttcgc 954 |||| ||||| |||||||| || |||||||||||||| |||| |||||||||||||||| Sbjct: 895 aaagcatcacgtggctggtgcgagaagatggtggatcttgcagaagactcatcgtttcgc 954 Query: 955 tttgttctgtctccgcagcctacagcctctttaattttcctctccaaacgttgtcaatgg 1014 |||||||| ||||| |||||||||||||||||| ||||||| ||||| || || ||| Sbjct: 955 tttgttctatctccacagcctacagcctctttacttttcctttccaagcggtgcggttgg 1014 Query: 1015 gctagtcctgaggagcttgagaaggttgatcagattgaagtctgcccgaaagctatggag 1074 |||||| ||||||| |||||||| ||||| || |||||||||||||||||||| |||||| Sbjct: 1015 gctagttctgaggaacttgagaaagttgagcatattgaagtctgcccgaaagcaatggag 1074 Query: 1075 atcagcgaacaaatcgcagacagaattagctcagatggtggaggtgctctgatcattgac 1134 |||| ||||| || ||||| ||||||||||| ||||| || ||||| || ||||||||| Sbjct: 1075 atcactgaacagattgcagatagaattagctcggatggagggggtgcacttatcattgac 1134 Query: 1135 tatggcaaaaatggaatagtgtctgatagtcttcaggcaatccgcaaacacaaattcgtt 1194 || || ||| |||||||||| |||||||||||||||||||||||||| ||||| || || Sbjct: 1135 tacggaaaagatggaatagtctctgatagtcttcaggcaatccgcaagcacaagtttgta 1194 Query: 1195 cacatcttagacgaccctgggtctgctgatctcagtgcctatgttgattttgctgcaatc 1254 ||||| || || ||||||| || || ||||| ||||| |||||||||||||| ||||| Sbjct: 1195 cacatattggataaccctggttcagccgatctgagtgcttatgttgattttgcatcaatc 1254 Query: 1255 aagcactctgccaaggaagcctcagatgatatttctgtccatggaccaatgactcaatcc 1314 | ||||| || |||||||| ||||||||||||||||| ||||| ||||||||||||||| Sbjct: 1255 agacactccgctaaggaagcttcagatgatatttctgttcatgggccaatgactcaatcc 1314 Query: 1315 cagttattgggttctcttggtatcaacttccgggtggaagcccttatgcaaaac--tgcg 1372 ||||| ||||| ||||||||||| |||||||| ||||||||||| | |||||| ||| Sbjct: 1315 cagttcttgggctctcttggtataaacttccgtgtggaagccctgctccaaaactgtgct 1374 Query: 1373 ac-gagaagcaggccgagtctctgaggacaggctactggcgtctagtcggagacggagaa 1431 || || ||||||||||||||||||||||||||||||||||||| |||||||| || ||| Sbjct: 1375 actgatgagcaggccgagtctctgaggacaggctactggcgtcttgtcggagatggtgaa 1434 Query: 1432 gccccattctgggaagggcctgatgaacaaacgcctattggcatgggcagtaggtacctg 1491 ||||||||||||||||| ||||| || ||||| || ||||||||||| | ||||||| || Sbjct: 1435 gccccattctgggaaggtcctgacgaccaaaccccaattggcatgggtactaggtacttg 1494 Query: 1492 gccatggccattgtcaacaagaagcaaggctcacctgttccattcgagt 1540 |||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 1495 gccatggccattgtcaacaagaagcaaggcacacccgttccattcgagt 1543 Score = 50.1 bits (25), Expect = 0.028 Identities = 31/33 (93%) Strand = Plus / Plus Query: 30 cgccgtcgagatgcttcggagcccagccgccgc 62 ||||||||||||| |||||||||| |||||||| Sbjct: 21 cgccgtcgagatgtttcggagcccggccgccgc 53
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 293 bits (148), Expect = 1e-75 Identities = 239/267 (89%), Gaps = 3/267 (1%) Strand = Plus / Plus Query: 1277 cagatgatatttctgtccatggaccaatgactcaatcccagttattgggttctcttggta 1336 |||||||||||||||| ||||| |||||||||||||||||||| ||||| |||||||||| Sbjct: 22947428 cagatgatatttctgttcatgggccaatgactcaatcccagttcttgggctctcttggta 22947487 Query: 1337 tcaacttccgggtggaagcccttatgcaaaactgcg--ac-gagaagcaggccgagtctc 1393 | |||||||| ||||||||||| | |||||||| | || || ||||||||||||||| Sbjct: 22947488 taaacttccgtgtggaagccctgctccaaaactgtgctactgatgagcaggccgagtctc 22947547 Query: 1394 tgaggacaggctactggcgtctagtcggagacggagaagccccattctgggaagggcctg 1453 |||||||||||||||||||||| |||||||| || |||||||||||||||||||| |||| Sbjct: 22947548 tgaggacaggctactggcgtcttgtcggagatggtgaagccccattctgggaaggtcctg 22947607 Query: 1454 atgaacaaacgcctattggcatgggcagtaggtacctggccatggccattgtcaacaaga 1513 | || ||||| || ||||||||||| | ||||||| |||||||||||||||||||||||| Sbjct: 22947608 acgaccaaaccccaattggcatgggtactaggtacttggccatggccattgtcaacaaga 22947667 Query: 1514 agcaaggctcacctgttccattcgagt 1540 |||||||| |||| ||||||||||||| Sbjct: 22947668 agcaaggcacacccgttccattcgagt 22947694 Score = 206 bits (104), Expect = 2e-49 Identities = 173/196 (88%) Strand = Plus / Plus Query: 640 gggtcagcaaagtttgttaatttcactaaggcgctcaacattaacttggtagaatgtagc 699 |||||| |||| |||||||||||||| || || ||||||||||||||||||||||||||| Sbjct: 22945397 gggtcatcaaaatttgttaatttcaccaaagcactcaacattaacttggtagaatgtagc 22945456 Query: 700 cctacactacaaaaggtgcagtacaatactctgaaatgtgaagatgaatctgttggtgat 759 || || ||||||||||||| |||||||||||||||||||||||||| | |||| ||| Sbjct: 22945457 cccacgttacaaaaggtgcaatacaatactctgaaatgtgaagatgagcccattggcgat 22945516 Query: 760 gaaaaaaggacagttagcaagctttgtggagcccctgtttattggcacgcctccctcgag 819 ||| ||||||||||||||||||||||||||||||||| | ||||| || ||||| || Sbjct: 22945517 aaaacaaggacagttagcaagctttgtggagcccctgtacactggcatgcttcccttgaa 22945576 Query: 820 caggttccttcaggat 835 |||||||||||||||| Sbjct: 22945577 caggttccttcaggat 22945592 Score = 206 bits (104), Expect = 2e-49 Identities = 194/224 (86%) Strand = Plus / Plus Query: 948 gtttcgctttgttctgtctccgcagcctacagcctctttaattttcctctccaaacgttg 1007 ||||||||||||||| ||||| |||||||||||||||||| ||||||| ||||| || || Sbjct: 22946736 gtttcgctttgttctatctccacagcctacagcctctttacttttcctttccaagcggtg 22946795 Query: 1008 tcaatgggctagtcctgaggagcttgagaaggttgatcagattgaagtctgcccgaaagc 1067 ||||||||| ||||||| |||||||| ||||| || |||||||||||||||||||| Sbjct: 22946796 cggttgggctagttctgaggaacttgagaaagttgagcatattgaagtctgcccgaaagc 22946855 Query: 1068 tatggagatcagcgaacaaatcgcagacagaattagctcagatggtggaggtgctctgat 1127 |||||||||| ||||| || ||||| ||||||||||| ||||| || ||||| || || Sbjct: 22946856 aatggagatcactgaacagattgcagatagaattagctcggatggagggggtgcacttat 22946915 Query: 1128 cattgactatggcaaaaatggaatagtgtctgatagtcttcagg 1171 ||||||||| || ||| |||||||||| |||||||||||||||| Sbjct: 22946916 cattgactacggaaaagatggaatagtctctgatagtcttcagg 22946959 Score = 133 bits (67), Expect = 2e-27 Identities = 97/107 (90%) Strand = Plus / Plus Query: 534 tggtgtgtgggcgatgtgtctgtgggagcaaatggggcaaccagagaaggtgaatttgat 593 |||||||||||| ||||| || ||||||||||||||||| |||||||| || ||| |||| Sbjct: 22945212 tggtgtgtgggcaatgtgcctctgggagcaaatggggcagccagagaaagtcaatctgat 22945271 Query: 594 tgagcttggcccaggacgaggaactctcttggcagatttacttcgtg 640 ||||||||| ||||| || |||||||||||||||||||||||||||| Sbjct: 22945272 tgagcttggtccagggcgcggaactctcttggcagatttacttcgtg 22945318 Score = 115 bits (58), Expect = 6e-22 Identities = 109/126 (86%) Strand = Plus / Plus Query: 403 agcgtagctgagtacatggaggaggtgcttacaaacccacagtctgggtactacatgaat 462 |||||||| |||||||||||||||||||| || ||||| ||||| |||| |||||| || Sbjct: 22944874 agcgtagccgagtacatggaggaggtgctgacgaacccgcagtcagggttctacatcaac 22944933 Query: 463 cgcgatgtgtttggcgaatctggggatttcatcacctcaccagaggtcagccagatgttt 522 ||||| ||||| || ||| ||||||||||||||||| || ||||||||||| |||||| Sbjct: 22944934 cgcgacgtgttcgggacatccggggatttcatcacctcgccggaggtcagccaaatgttt 22944993 Query: 523 ggagag 528 |||||| Sbjct: 22944994 ggagag 22944999 Score = 63.9 bits (32), Expect = 2e-06 Identities = 53/60 (88%) Strand = Plus / Plus Query: 890 ttcagaaagggtcacgcggctggtgtgaaaagatggtggatctcgcaggagactcatcgt 949 ||||||||| ||||| |||||||| || |||||||||||||| |||| ||||||||||| Sbjct: 22946609 ttcagaaagcatcacgtggctggtgcgagaagatggtggatcttgcagaagactcatcgt 22946668 Score = 63.9 bits (32), Expect = 2e-06 Identities = 92/112 (82%) Strand = Plus / Plus Query: 1168 caggcaatccgcaaacacaaattcgttcacatcttagacgaccctgggtctgctgatctc 1227 |||||||||||||| ||||| || || ||||| || || ||||||| || || ||||| Sbjct: 22947230 caggcaatccgcaagcacaagtttgtacacatattggataaccctggttcagccgatctg 22947289 Query: 1228 agtgcctatgttgattttgctgcaatcaagcactctgccaaggaagcctcag 1279 ||||| |||||||||||||| |||||| ||||| || |||||||| |||| Sbjct: 22947290 agtgcttatgttgattttgcatcaatcagacactccgctaaggaagcttcag 22947341 Score = 56.0 bits (28), Expect = 5e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 321 agagcactcgcatgaggcgccgttggactctgaccttgtgaagcaccttaagagcatcat 380 |||||||||||| ||| || ||| ||| || || || ||||||||||| ||||||||||| Sbjct: 22944692 agagcactcgcacgagccgtcgtcggattccgagctagtgaagcacctcaagagcatcat 22944751 Query: 381 aaag 384 |||| Sbjct: 22944752 aaag 22944755 Score = 50.1 bits (25), Expect = 0.028 Identities = 31/33 (93%) Strand = Plus / Plus Query: 30 cgccgtcgagatgcttcggagcccagccgccgc 62 ||||||||||||| |||||||||| |||||||| Sbjct: 22944293 cgccgtcgagatgtttcggagcccggccgccgc 22944325 Score = 46.1 bits (23), Expect = 0.43 Identities = 44/51 (86%) Strand = Plus / Plus Query: 844 ataattgttgcccatgaattccttgatgctttgccgatccatcaatttcag 894 |||||| |||| ||||||||| |||||| ||||| || |||||||||||| Sbjct: 22946462 ataattattgcacatgaattctatgatgccttgccaattcatcaatttcag 22946512
>dbj|AP003243.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0415C01 Length = 138701 Score = 293 bits (148), Expect = 1e-75 Identities = 239/267 (89%), Gaps = 3/267 (1%) Strand = Plus / Plus Query: 1277 cagatgatatttctgtccatggaccaatgactcaatcccagttattgggttctcttggta 1336 |||||||||||||||| ||||| |||||||||||||||||||| ||||| |||||||||| Sbjct: 17834 cagatgatatttctgttcatgggccaatgactcaatcccagttcttgggctctcttggta 17893 Query: 1337 tcaacttccgggtggaagcccttatgcaaaactgcg--ac-gagaagcaggccgagtctc 1393 | |||||||| ||||||||||| | |||||||| | || || ||||||||||||||| Sbjct: 17894 taaacttccgtgtggaagccctgctccaaaactgtgctactgatgagcaggccgagtctc 17953 Query: 1394 tgaggacaggctactggcgtctagtcggagacggagaagccccattctgggaagggcctg 1453 |||||||||||||||||||||| |||||||| || |||||||||||||||||||| |||| Sbjct: 17954 tgaggacaggctactggcgtcttgtcggagatggtgaagccccattctgggaaggtcctg 18013 Query: 1454 atgaacaaacgcctattggcatgggcagtaggtacctggccatggccattgtcaacaaga 1513 | || ||||| || ||||||||||| | ||||||| |||||||||||||||||||||||| Sbjct: 18014 acgaccaaaccccaattggcatgggtactaggtacttggccatggccattgtcaacaaga 18073 Query: 1514 agcaaggctcacctgttccattcgagt 1540 |||||||| |||| ||||||||||||| Sbjct: 18074 agcaaggcacacccgttccattcgagt 18100 Score = 206 bits (104), Expect = 2e-49 Identities = 173/196 (88%) Strand = Plus / Plus Query: 640 gggtcagcaaagtttgttaatttcactaaggcgctcaacattaacttggtagaatgtagc 699 |||||| |||| |||||||||||||| || || ||||||||||||||||||||||||||| Sbjct: 15803 gggtcatcaaaatttgttaatttcaccaaagcactcaacattaacttggtagaatgtagc 15862 Query: 700 cctacactacaaaaggtgcagtacaatactctgaaatgtgaagatgaatctgttggtgat 759 || || ||||||||||||| |||||||||||||||||||||||||| | |||| ||| Sbjct: 15863 cccacgttacaaaaggtgcaatacaatactctgaaatgtgaagatgagcccattggcgat 15922 Query: 760 gaaaaaaggacagttagcaagctttgtggagcccctgtttattggcacgcctccctcgag 819 ||| ||||||||||||||||||||||||||||||||| | ||||| || ||||| || Sbjct: 15923 aaaacaaggacagttagcaagctttgtggagcccctgtacactggcatgcttcccttgaa 15982 Query: 820 caggttccttcaggat 835 |||||||||||||||| Sbjct: 15983 caggttccttcaggat 15998 Score = 206 bits (104), Expect = 2e-49 Identities = 194/224 (86%) Strand = Plus / Plus Query: 948 gtttcgctttgttctgtctccgcagcctacagcctctttaattttcctctccaaacgttg 1007 ||||||||||||||| ||||| |||||||||||||||||| ||||||| ||||| || || Sbjct: 17142 gtttcgctttgttctatctccacagcctacagcctctttacttttcctttccaagcggtg 17201 Query: 1008 tcaatgggctagtcctgaggagcttgagaaggttgatcagattgaagtctgcccgaaagc 1067 ||||||||| ||||||| |||||||| ||||| || |||||||||||||||||||| Sbjct: 17202 cggttgggctagttctgaggaacttgagaaagttgagcatattgaagtctgcccgaaagc 17261 Query: 1068 tatggagatcagcgaacaaatcgcagacagaattagctcagatggtggaggtgctctgat 1127 |||||||||| ||||| || ||||| ||||||||||| ||||| || ||||| || || Sbjct: 17262 aatggagatcactgaacagattgcagatagaattagctcggatggagggggtgcacttat 17321 Query: 1128 cattgactatggcaaaaatggaatagtgtctgatagtcttcagg 1171 ||||||||| || ||| |||||||||| |||||||||||||||| Sbjct: 17322 cattgactacggaaaagatggaatagtctctgatagtcttcagg 17365 Score = 133 bits (67), Expect = 2e-27 Identities = 97/107 (90%) Strand = Plus / Plus Query: 534 tggtgtgtgggcgatgtgtctgtgggagcaaatggggcaaccagagaaggtgaatttgat 593 |||||||||||| ||||| || ||||||||||||||||| |||||||| || ||| |||| Sbjct: 15618 tggtgtgtgggcaatgtgcctctgggagcaaatggggcagccagagaaagtcaatctgat 15677 Query: 594 tgagcttggcccaggacgaggaactctcttggcagatttacttcgtg 640 ||||||||| ||||| || |||||||||||||||||||||||||||| Sbjct: 15678 tgagcttggtccagggcgcggaactctcttggcagatttacttcgtg 15724 Score = 115 bits (58), Expect = 6e-22 Identities = 109/126 (86%) Strand = Plus / Plus Query: 403 agcgtagctgagtacatggaggaggtgcttacaaacccacagtctgggtactacatgaat 462 |||||||| |||||||||||||||||||| || ||||| ||||| |||| |||||| || Sbjct: 15280 agcgtagccgagtacatggaggaggtgctgacgaacccgcagtcagggttctacatcaac 15339 Query: 463 cgcgatgtgtttggcgaatctggggatttcatcacctcaccagaggtcagccagatgttt 522 ||||| ||||| || ||| ||||||||||||||||| || ||||||||||| |||||| Sbjct: 15340 cgcgacgtgttcgggacatccggggatttcatcacctcgccggaggtcagccaaatgttt 15399 Query: 523 ggagag 528 |||||| Sbjct: 15400 ggagag 15405 Score = 63.9 bits (32), Expect = 2e-06 Identities = 53/60 (88%) Strand = Plus / Plus Query: 890 ttcagaaagggtcacgcggctggtgtgaaaagatggtggatctcgcaggagactcatcgt 949 ||||||||| ||||| |||||||| || |||||||||||||| |||| ||||||||||| Sbjct: 17015 ttcagaaagcatcacgtggctggtgcgagaagatggtggatcttgcagaagactcatcgt 17074 Score = 63.9 bits (32), Expect = 2e-06 Identities = 92/112 (82%) Strand = Plus / Plus Query: 1168 caggcaatccgcaaacacaaattcgttcacatcttagacgaccctgggtctgctgatctc 1227 |||||||||||||| ||||| || || ||||| || || ||||||| || || ||||| Sbjct: 17636 caggcaatccgcaagcacaagtttgtacacatattggataaccctggttcagccgatctg 17695 Query: 1228 agtgcctatgttgattttgctgcaatcaagcactctgccaaggaagcctcag 1279 ||||| |||||||||||||| |||||| ||||| || |||||||| |||| Sbjct: 17696 agtgcttatgttgattttgcatcaatcagacactccgctaaggaagcttcag 17747 Score = 56.0 bits (28), Expect = 5e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 321 agagcactcgcatgaggcgccgttggactctgaccttgtgaagcaccttaagagcatcat 380 |||||||||||| ||| || ||| ||| || || || ||||||||||| ||||||||||| Sbjct: 15098 agagcactcgcacgagccgtcgtcggattccgagctagtgaagcacctcaagagcatcat 15157 Query: 381 aaag 384 |||| Sbjct: 15158 aaag 15161 Score = 50.1 bits (25), Expect = 0.028 Identities = 31/33 (93%) Strand = Plus / Plus Query: 30 cgccgtcgagatgcttcggagcccagccgccgc 62 ||||||||||||| |||||||||| |||||||| Sbjct: 14699 cgccgtcgagatgtttcggagcccggccgccgc 14731 Score = 46.1 bits (23), Expect = 0.43 Identities = 44/51 (86%) Strand = Plus / Plus Query: 844 ataattgttgcccatgaattccttgatgctttgccgatccatcaatttcag 894 |||||| |||| ||||||||| |||||| ||||| || |||||||||||| Sbjct: 16868 ataattattgcacatgaattctatgatgccttgccaattcatcaatttcag 16918
>gb|BT012731.1| Lycopersicon esculentum clone 113659F, mRNA sequence Length = 1937 Score = 103 bits (52), Expect = 2e-18 Identities = 100/116 (86%) Strand = Plus / Plus Query: 460 aatcgcgatgtgtttggcgaatctggggatttcatcacctcaccagaggtcagccagatg 519 ||||||||||||||||||| | || ||||| || ||||| || || || ||||||||| Sbjct: 391 aatcgcgatgtgtttggcgcagaaggtgattttattacctctcctgaagtaagccagatg 450 Query: 520 tttggagagctgattggtgtgtgggcgatgtgtctgtgggagcaaatggggcaacc 575 ||||||||| || ||||||| ||||| |||||||| |||||||||||||||||||| Sbjct: 451 tttggagagatggttggtgtttgggccatgtgtctttgggagcaaatggggcaacc 506 Score = 77.8 bits (39), Expect = 1e-10 Identities = 87/103 (84%) Strand = Plus / Plus Query: 1217 ctgctgatctcagtgcctatgttgattttgctgcaatcaagcactctgccaaggaagcct 1276 |||||||||| ||||| |||||||| ||||||||||||| || ||||| ||||||| | Sbjct: 1157 ctgctgatcttagtgcttatgttgactttgctgcaatcagacattctgcagaggaagctt 1216 Query: 1277 cagatgatatttctgtccatggaccaatgactcaatcccagtt 1319 |||||||| | |||| ||||| ||||||||||| || ||||| Sbjct: 1217 cagatgatgtggctgtgcatggcccaatgactcagtctcagtt 1259 Score = 61.9 bits (31), Expect = 7e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 1096 agaattagctcagatggtggaggtgctctgatcattgactatggcaaaaatggaatagtg 1155 |||||| ||||||||||||| || ||||| || ||||| ||||| |||||||||||| Sbjct: 1036 agaattggctcagatggtggtggggctctcattattgattatggtctaaatggaatagtc 1095 Query: 1156 tctgatagtcttcaggcaatccg 1178 || || ||||||||||| ||||| Sbjct: 1096 tcagacagtcttcaggctatccg 1118 Score = 42.1 bits (21), Expect = 6.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 355 cttgtgaagcaccttaagagcatcataaagttc 387 ||||| ||||| |||||||||||||| |||||| Sbjct: 286 cttgttaagcatcttaagagcatcattaagttc 318
>gb|BT025322.1| Arabidopsis thaliana At3g28700 mRNA, complete cds Length = 1416 Score = 71.9 bits (36), Expect = 8e-09 Identities = 108/132 (81%) Strand = Plus / Plus Query: 1213 gggtctgctgatctcagtgcctatgttgattttgctgcaatcaagcactctgccaaggaa 1272 |||||||| ||||| ||||| ||||| || ||| || |||| || ||||| || ||||| Sbjct: 1087 gggtctgccgatctaagtgcttatgtcgactttccttcaataaaacactccgctgaggaa 1146 Query: 1273 gcctcagatgatatttctgtccatggaccaatgactcaatcccagttattgggttctctt 1332 || ||||| || | || ||||||||||| |||||||| |||||||| |||||||| ||| Sbjct: 1147 gcttcagaaaatgtctcagtccatggacctatgactcagtcccagttcttgggttcgctt 1206 Query: 1333 ggtatcaacttc 1344 || || |||||| Sbjct: 1207 ggaataaacttc 1218 Score = 54.0 bits (27), Expect = 0.002 Identities = 69/83 (83%) Strand = Plus / Plus Query: 487 gatttcatcacctcaccagaggtcagccagatgtttggagagctgattggtgtgtgggcg 546 |||||||| || || ||||| || ||||| ||||| || ||| |||||||||| ||| | Sbjct: 364 gatttcattacttctccagaagttagccaaatgttcggcgagatgattggtgtttggacc 423 Query: 547 atgtgtctgtgggagcaaatggg 569 ||||||| |||||||||||||| Sbjct: 424 gtgtgtctttgggagcaaatggg 446
>ref|NM_113790.2| Arabidopsis thaliana unknown protein (AT3G28700) mRNA, complete cds Length = 1711 Score = 71.9 bits (36), Expect = 8e-09 Identities = 108/132 (81%) Strand = Plus / Plus Query: 1213 gggtctgctgatctcagtgcctatgttgattttgctgcaatcaagcactctgccaaggaa 1272 |||||||| ||||| ||||| ||||| || ||| || |||| || ||||| || ||||| Sbjct: 1102 gggtctgccgatctaagtgcttatgtcgactttccttcaataaaacactccgctgaggaa 1161 Query: 1273 gcctcagatgatatttctgtccatggaccaatgactcaatcccagttattgggttctctt 1332 || ||||| || | || ||||||||||| |||||||| |||||||| |||||||| ||| Sbjct: 1162 gcttcagaaaatgtctcagtccatggacctatgactcagtcccagttcttgggttcgctt 1221 Query: 1333 ggtatcaacttc 1344 || || |||||| Sbjct: 1222 ggaataaacttc 1233 Score = 54.0 bits (27), Expect = 0.002 Identities = 69/83 (83%) Strand = Plus / Plus Query: 487 gatttcatcacctcaccagaggtcagccagatgtttggagagctgattggtgtgtgggcg 546 |||||||| || || ||||| || ||||| ||||| || ||| |||||||||| ||| | Sbjct: 379 gatttcattacttctccagaagttagccaaatgttcggcgagatgattggtgtttggacc 438 Query: 547 atgtgtctgtgggagcaaatggg 569 ||||||| |||||||||||||| Sbjct: 439 gtgtgtctttgggagcaaatggg 461
>emb|BX825205.1|CNS0A7GH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL20ZA05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 616 Score = 71.9 bits (36), Expect = 8e-09 Identities = 108/132 (81%) Strand = Plus / Plus Query: 1213 gggtctgctgatctcagtgcctatgttgattttgctgcaatcaagcactctgccaaggaa 1272 |||||||| ||||| ||||| ||||| || ||| || |||| || ||||| || ||||| Sbjct: 7 gggtctgccgatctaagtgcttatgtcgactttccttcaataaaacactccgctgaggaa 66 Query: 1273 gcctcagatgatatttctgtccatggaccaatgactcaatcccagttattgggttctctt 1332 || ||||| || | || ||||||||||| |||||||| |||||||| |||||||| ||| Sbjct: 67 gcttcagaaaatgtctcagtccatggacctatgactcagtcccagttcttgggttcgctt 126 Query: 1333 ggtatcaacttc 1344 || || |||||| Sbjct: 127 ggaataaacttc 138
>emb|BX822153.1|CNS0A637 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB16ZE07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1657 Score = 71.9 bits (36), Expect = 8e-09 Identities = 108/132 (81%) Strand = Plus / Plus Query: 1213 gggtctgctgatctcagtgcctatgttgattttgctgcaatcaagcactctgccaaggaa 1272 |||||||| ||||| ||||| ||||| || ||| || |||| || ||||| || ||||| Sbjct: 1082 gggtctgccgatctaagtgcttatgtcgactttccttcaataaaacactccgctgaggaa 1141 Query: 1273 gcctcagatgatatttctgtccatggaccaatgactcaatcccagttattgggttctctt 1332 || ||||| || | || ||||||||||| |||||||| |||||||| |||||||| ||| Sbjct: 1142 gcttcagaaaatgtctcagtccatggacctatgactcagtcccagttcttgggttcgctt 1201 Query: 1333 ggtatcaacttc 1344 || || |||||| Sbjct: 1202 ggaataaacttc 1213 Score = 54.0 bits (27), Expect = 0.002 Identities = 69/83 (83%) Strand = Plus / Plus Query: 487 gatttcatcacctcaccagaggtcagccagatgtttggagagctgattggtgtgtgggcg 546 |||||||| || || ||||| || ||||| ||||| || ||| |||||||||| ||| | Sbjct: 359 gatttcattacttctccagaagttagccaaatgttcggcgagatgattggtgtttggacc 418 Query: 547 atgtgtctgtgggagcaaatggg 569 ||||||| |||||||||||||| Sbjct: 419 gtgtgtctttgggagcaaatggg 441
>emb|BX824972.1|CNS0A5KA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH86ZE08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1482 Score = 71.9 bits (36), Expect = 8e-09 Identities = 108/132 (81%) Strand = Plus / Plus Query: 1213 gggtctgctgatctcagtgcctatgttgattttgctgcaatcaagcactctgccaaggaa 1272 |||||||| ||||| ||||| ||||| || ||| || |||| || ||||| || ||||| Sbjct: 1082 gggtctgccgatctaagtgcttatgtcgactttccttcaataaaacactccgctgaggaa 1141 Query: 1273 gcctcagatgatatttctgtccatggaccaatgactcaatcccagttattgggttctctt 1332 || ||||| || | || ||||||||||| |||||||| |||||||| |||||||| ||| Sbjct: 1142 gcttcagaaaatgtctcagtccatggacctatgactcagtcccagttcttgggttcgctt 1201 Query: 1333 ggtatcaacttc 1344 || || |||||| Sbjct: 1202 ggaataaacttc 1213 Score = 54.0 bits (27), Expect = 0.002 Identities = 69/83 (83%) Strand = Plus / Plus Query: 487 gatttcatcacctcaccagaggtcagccagatgtttggagagctgattggtgtgtgggcg 546 |||||||| || || ||||| || ||||| ||||| || ||| |||||||||| ||| | Sbjct: 359 gatttcattacttctccagaagttagccaaatgttcggcgagatgattggtgtttggacc 418 Query: 547 atgtgtctgtgggagcaaatggg 569 ||||||| |||||||||||||| Sbjct: 419 gtgtgtctttgggagcaaatggg 441
>emb|BX823812.1|CNS0A5BR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS78ZF10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1664 Score = 71.9 bits (36), Expect = 8e-09 Identities = 108/132 (81%) Strand = Plus / Plus Query: 1213 gggtctgctgatctcagtgcctatgttgattttgctgcaatcaagcactctgccaaggaa 1272 |||||||| ||||| ||||| ||||| || ||| || |||| || ||||| || ||||| Sbjct: 1102 gggtctgccgatctaagtgcttatgtcgactttccttcaataaaacactccgctgaggaa 1161 Query: 1273 gcctcagatgatatttctgtccatggaccaatgactcaatcccagttattgggttctctt 1332 || ||||| || | || ||||||||||| |||||||| |||||||| |||||||| ||| Sbjct: 1162 gcttcagaaaatgtctcagtccatggacctatgactcagtcccagttcttgggttcgctt 1221 Query: 1333 ggtatcaacttc 1344 || || |||||| Sbjct: 1222 ggaataaacttc 1233 Score = 54.0 bits (27), Expect = 0.002 Identities = 69/83 (83%) Strand = Plus / Plus Query: 487 gatttcatcacctcaccagaggtcagccagatgtttggagagctgattggtgtgtgggcg 546 |||||||| || || ||||| || ||||| ||||| || ||| |||||||||| ||| | Sbjct: 379 gatttcattacttctccagaagttagccaaatgttcggcgagatgattggtgtttggacc 438 Query: 547 atgtgtctgtgggagcaaatggg 569 ||||||| |||||||||||||| Sbjct: 439 gtgtgtctttgggagcaaatggg 461
>gb|AC146777.27| Medicago truncatula clone mth2-173c10, complete sequence Length = 121026 Score = 69.9 bits (35), Expect = 3e-08 Identities = 68/79 (86%) Strand = Plus / Plus Query: 1379 agcaggccgagtctctgaggacaggctactggcgtctagtcggagacggagaagccccat 1438 ||||||| ||||||||||| ||||| ||||||||||| || || || || |||||||||| Sbjct: 24328 agcaggctgagtctctgagaacaggatactggcgtcttgtaggcgatggtgaagccccat 24387 Query: 1439 tctgggaagggcctgatga 1457 | |||||||| ||||||| Sbjct: 24388 tttgggaaggagctgatga 24406 Score = 65.9 bits (33), Expect = 5e-07 Identities = 72/85 (84%) Strand = Plus / Plus Query: 533 ttggtgtgtgggcgatgtgtctgtgggagcaaatggggcaaccagagaaggtgaatttga 592 ||||||| |||| ||||||| |||||||||||||||| | ||| || | || ||||| Sbjct: 21391 ttggtgtatgggtgatgtgtttgtgggagcaaatgggccgacccgaaagagtaaatttag 21450 Query: 593 ttgagcttggcccaggacgaggaac 617 |||||||||| |||||||||||||| Sbjct: 21451 ttgagcttggtccaggacgaggaac 21475 Score = 44.1 bits (22), Expect = 1.7 Identities = 34/38 (89%) Strand = Plus / Plus Query: 487 gatttcatcacctcaccagaggtcagccagatgtttgg 524 ||||| |||||||| || || ||||||||||||||||| Sbjct: 21269 gattttatcacctctcctgaagtcagccagatgtttgg 21306
>dbj|AP000420.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MZN14 Length = 82890 Score = 60.0 bits (30), Expect = 3e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 1291 gtccatggaccaatgactcaatcccagttattgggttctcttggtatcaacttc 1344 ||||||||||| |||||||| |||||||| |||||||| ||||| || |||||| Sbjct: 64150 gtccatggacctatgactcagtcccagttcttgggttcgcttggaataaacttc 64203
>emb|AJ293484.1|SHY293484 Saccharum hybrid cultivar R570 microsatellite DNA, clone mSSCIR11 Length = 427 Score = 52.0 bits (26), Expect = 0.007 Identities = 41/46 (89%) Strand = Plus / Minus Query: 892 cagaaagggtcacgcggctggtgtgaaaagatggtggatctcgcag 937 ||||||| ||||| |||||||| ||||||||||||||||| |||| Sbjct: 82 cagaaagcatcacgtggctggtgcgaaaagatggtggatcttgcag 37 Score = 44.1 bits (22), Expect = 1.7 Identities = 46/54 (85%) Strand = Plus / Minus Query: 841 accataattgttgcccatgaattccttgatgctttgccgatccatcaatttcag 894 |||||||| |||| ||||||||| |||||| || ||||||||||| |||||| Sbjct: 271 accataatcattgcacatgaattctatgatgccttaccgatccatcagtttcag 218
>gb|CP000463.1| Rhodopseudomonas palustris BisA53, complete genome Length = 5505494 Score = 50.1 bits (25), Expect = 0.028 Identities = 40/45 (88%) Strand = Plus / Minus Query: 487 gatttcatcacctcaccagaggtcagccagatgtttggagagctg 531 |||||||||||||| || || |||||||||||||| || |||||| Sbjct: 1608147 gatttcatcacctcgccggaagtcagccagatgttcggcgagctg 1608103
>ref|XM_001182552.1| PREDICTED: Strongylocentrotus purpuratus hypothetical LOC575699 (LOC575699), mRNA Length = 1155 Score = 48.1 bits (24), Expect = 0.11 Identities = 39/44 (88%) Strand = Plus / Plus Query: 490 ttcatcacctcaccagaggtcagccagatgtttggagagctgat 533 ||||| || ||||||||| |||| ||||||||||||||| |||| Sbjct: 130 ttcattacttcaccagagatcagtcagatgtttggagagttgat 173
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 48.1 bits (24), Expect = 0.11 Identities = 39/44 (88%) Strand = Plus / Minus Query: 484 ggggatttcatcacctcaccagaggtcagccagatgtttggaga 527 ||||||||| ||||||| || || |||||||||||||| ||||| Sbjct: 2725380 ggggatttcgtcacctcgcccgaagtcagccagatgttcggaga 2725337
>ref|XM_776085.1| PREDICTED: Strongylocentrotus purpuratus hypothetical LOC575699 (LOC575699), mRNA Length = 1155 Score = 48.1 bits (24), Expect = 0.11 Identities = 39/44 (88%) Strand = Plus / Plus Query: 490 ttcatcacctcaccagaggtcagccagatgtttggagagctgat 533 ||||| || ||||||||| |||| ||||||||||||||| |||| Sbjct: 130 ttcattacttcaccagagatcagtcagatgtttggagagttgat 173
>ref|XM_419525.2| PREDICTED: Gallus gallus hypothetical LOC421477 (LOC421477), mRNA Length = 1458 Score = 46.1 bits (23), Expect = 0.43 Identities = 35/39 (89%) Strand = Plus / Plus Query: 490 ttcatcacctcaccagaggtcagccagatgtttggagag 528 ||||||||||| || ||| |||||||||| ||||||||| Sbjct: 294 ttcatcacctcgccggagatcagccagatatttggagag 332
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 46.1 bits (23), Expect = 0.43 Identities = 41/47 (87%) Strand = Plus / Minus Query: 487 gatttcatcacctcaccagaggtcagccagatgtttggagagctgat 533 ||||||| |||| | || ||| |||||||||||||||| |||||||| Sbjct: 963559 gatttcaccaccgcgcccgagatcagccagatgtttggcgagctgat 963513
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Minus Query: 176 cgtccccgccgccgttcccgccg 198 ||||||||||||||||||||||| Sbjct: 927373 cgtccccgccgccgttcccgccg 927351
>gb|AC137267.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032G21, from chromosome 3, complete sequence Length = 187621 Score = 46.1 bits (23), Expect = 0.43 Identities = 26/27 (96%) Strand = Plus / Plus Query: 55 gccgccgctctgctccgccacctgccc 81 ||||||||||||||||||| ||||||| Sbjct: 33315 gccgccgctctgctccgccgcctgccc 33341
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 46.1 bits (23), Expect = 0.43 Identities = 26/27 (96%) Strand = Plus / Plus Query: 55 gccgccgctctgctccgccacctgccc 81 ||||||||||||||||||| ||||||| Sbjct: 10614502 gccgccgctctgctccgccgcctgccc 10614528
>emb|BX842574.1| Mycobacterium tuberculosis H37Rv complete genome; segment 3/13 Length = 349564 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Minus Query: 176 cgtccccgccgccgttcccgccg 198 ||||||||||||||||||||||| Sbjct: 243191 cgtccccgccgccgttcccgccg 243169
>gb|CP000377.1| Silicibacter sp. TM1040, complete genome Length = 3200938 Score = 44.1 bits (22), Expect = 1.7 Identities = 34/38 (89%) Strand = Plus / Minus Query: 487 gatttcatcacctcaccagaggtcagccagatgtttgg 524 |||||||||||| | || ||| |||||||||||||||| Sbjct: 659276 gatttcatcaccgccccggagatcagccagatgtttgg 659239
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 44.1 bits (22), Expect = 1.7 Identities = 34/38 (89%) Strand = Plus / Plus Query: 484 ggggatttcatcacctcaccagaggtcagccagatgtt 521 ||||||||||||||| |||| || || ||||||||||| Sbjct: 1478021 ggggatttcatcaccgcaccggaagtaagccagatgtt 1478058
>gb|AC146904.1| Human Herpesvirus 5 PH-BAC isolate, complete sequence Length = 229700 Score = 44.1 bits (22), Expect = 1.7 Identities = 25/26 (96%) Strand = Plus / Plus Query: 175 tcgtccccgccgccgttcccgccgcc 200 |||||||||||||||| ||||||||| Sbjct: 31441 tcgtccccgccgccgtccccgccgcc 31466
>emb|AL354936.21| Human DNA sequence from clone RP11-374A22 on chromosome 6 Contains a novel gene, the 5' end of the TCBA1 gene for T-cell lymphoma breakpoint associated target 1 and a CpG island, complete sequence Length = 161618 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1717 actattttcttgtatgctattt 1738 |||||||||||||||||||||| Sbjct: 151040 actattttcttgtatgctattt 151019
>emb|AL136451.17| Human DNA sequence from clone RP11-162M1 on chromosome 10, complete sequence Length = 124392 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 141 ttacatatccccttcctccttc 162 |||||||||||||||||||||| Sbjct: 84243 ttacatatccccttcctccttc 84264
>gb|AE009491.1| Brucella melitensis 16M chromosome I, section 48 of 195 of the complete sequence Length = 10483 Score = 44.1 bits (22), Expect = 1.7 Identities = 34/38 (89%) Strand = Plus / Minus Query: 484 ggggatttcatcacctcaccagaggtcagccagatgtt 521 ||||||||||||||| |||| || || ||||||||||| Sbjct: 4032 ggggatttcatcaccgcaccggaagtaagccagatgtt 3995
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 44.1 bits (22), Expect = 1.7 Identities = 34/38 (89%) Strand = Plus / Plus Query: 484 ggggatttcatcacctcaccagaggtcagccagatgtt 521 ||||||||||||||| |||| || || ||||||||||| Sbjct: 1496085 ggggatttcatcaccgcaccggaagtaagccagatgtt 1496122
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 44.1 bits (22), Expect = 1.7 Identities = 34/38 (89%) Strand = Plus / Plus Query: 484 ggggatttcatcacctcaccagaggtcagccagatgtt 521 ||||||||||||||| |||| || || ||||||||||| Sbjct: 1493239 ggggatttcatcaccgcaccggaagtaagccagatgtt 1493276
>ref|XM_514395.2| PREDICTED: Pan troglodytes mitofusin 2 (MFN2), mRNA Length = 4368 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 410 ctgagtacatggaggaggtgc 430 ||||||||||||||||||||| Sbjct: 944 ctgagtacatggaggaggtgc 964
>ref|XM_001002345.1| PREDICTED: Mus musculus mitofusin 2, transcript variant 6 (Mfn2), mRNA Length = 1509 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 410 ctgagtacatggaggaggtgc 430 ||||||||||||||||||||| Sbjct: 236 ctgagtacatggaggaggtgc 256
>ref|XM_001002405.1| PREDICTED: Mus musculus mitofusin 2, transcript variant 8 (Mfn2), mRNA Length = 2197 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 410 ctgagtacatggaggaggtgc 430 ||||||||||||||||||||| Sbjct: 1199 ctgagtacatggaggaggtgc 1219
>ref|XM_001002419.1| PREDICTED: Mus musculus mitofusin 2, transcript variant 9 (Mfn2), mRNA Length = 2638 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 410 ctgagtacatggaggaggtgc 430 ||||||||||||||||||||| Sbjct: 1199 ctgagtacatggaggaggtgc 1219
>ref|XM_001002390.1| PREDICTED: Mus musculus mitofusin 2, transcript variant 7 (Mfn2), mRNA Length = 4150 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 410 ctgagtacatggaggaggtgc 430 ||||||||||||||||||||| Sbjct: 1196 ctgagtacatggaggaggtgc 1216
>ref|XM_001002380.1| PREDICTED: Mus musculus mitofusin 2, transcript variant 4 (Mfn2), mRNA Length = 4150 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 410 ctgagtacatggaggaggtgc 430 ||||||||||||||||||||| Sbjct: 1196 ctgagtacatggaggaggtgc 1216
>ref|XM_001002368.1| PREDICTED: Mus musculus mitofusin 2, transcript variant 2 (Mfn2), mRNA Length = 4174 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 410 ctgagtacatggaggaggtgc 430 ||||||||||||||||||||| Sbjct: 1220 ctgagtacatggaggaggtgc 1240
>ref|XM_001002355.1| PREDICTED: Mus musculus mitofusin 2, transcript variant 3 (Mfn2), mRNA Length = 4219 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 410 ctgagtacatggaggaggtgc 430 ||||||||||||||||||||| Sbjct: 1265 ctgagtacatggaggaggtgc 1285
>gb|AC171242.2| Gallus gallus BAC clone CH261-59O7 from chromosome ul, complete sequence Length = 191648 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 135 cactccttacatatccccttcctcc 159 |||||||||||| |||||||||||| Sbjct: 67939 cactccttacatctccccttcctcc 67963
>ref|NM_133201.1| Mus musculus mitofusin 2 (Mfn2), mRNA gb|AF384100.1| Mus musculus hypertension related protein 1 mRNA, complete cds Length = 4425 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 410 ctgagtacatggaggaggtgc 430 ||||||||||||||||||||| Sbjct: 1079 ctgagtacatggaggaggtgc 1099
>gb|AC144731.15| Medicago truncatula clone mth2-5g18, complete sequence Length = 115175 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 152 cttcctccttcctcgcccgcttctc 176 |||||||||||||| |||||||||| Sbjct: 7792 cttcctccttcctctcccgcttctc 7816
>gb|BC070880.1| Rattus norvegicus mitofusin 2, mRNA (cDNA clone MGC:91421 IMAGE:7096620), complete cds Length = 3895 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 410 ctgagtacatggaggaggtgc 430 ||||||||||||||||||||| Sbjct: 951 ctgagtacatggaggaggtgc 971
>ref|NM_130894.2| Rattus norvegicus mitofusin 2 (Mfn2), mRNA gb|U41803.2|RNU41803 Rattus norvegicus HSG protein mRNA, complete cds Length = 4161 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 410 ctgagtacatggaggaggtgc 430 ||||||||||||||||||||| Sbjct: 965 ctgagtacatggaggaggtgc 985
>gb|AC125350.3| Mus musculus BAC clone RP23-423B11 from chromosome 13, complete sequence Length = 205567 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1254 caagcactctgccaaggaagc 1274 ||||||||||||||||||||| Sbjct: 110440 caagcactctgccaaggaagc 110460
>gb|AC129299.3| Mus musculus BAC clone RP24-420E16 from chromosome 14, complete sequence Length = 156372 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 977 cagcctctttaattttcctct 997 ||||||||||||||||||||| Sbjct: 151254 cagcctctttaattttcctct 151274
>gb|BC046503.1| Mus musculus mitofusin 2, mRNA (cDNA clone MGC:25443 IMAGE:4191179), complete cds Length = 4258 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 410 ctgagtacatggaggaggtgc 430 ||||||||||||||||||||| Sbjct: 977 ctgagtacatggaggaggtgc 997
>gb|AC095558.10| Rattus norvegicus 18 BAC CH230-8D7 (Children's Hospital Oakland Research Institute) complete sequence Length = 226956 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1254 caagcactctgccaaggaagc 1274 ||||||||||||||||||||| Sbjct: 98578 caagcactctgccaaggaagc 98558
>gb|AC091762.27| Mus musculus strain C57BL/6J clone rp23-151n4 map 2, complete sequence Length = 204734 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 241 gacaagctccagggaccatca 261 ||||||||||||||||||||| Sbjct: 46148 gacaagctccagggaccatca 46168
>dbj|AK146801.1| Mus musculus 17 days embryo heart cDNA, RIKEN full-length enriched library, clone:I920057K20 product:mitofusin 2, full insert sequence Length = 4305 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 410 ctgagtacatggaggaggtgc 430 ||||||||||||||||||||| Sbjct: 1042 ctgagtacatggaggaggtgc 1062
>dbj|AK147863.1| Mus musculus melanocyte cDNA, RIKEN full-length enriched library, clone:G270071G05 product:mitofusin 2, full insert sequence Length = 4258 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 410 ctgagtacatggaggaggtgc 430 ||||||||||||||||||||| Sbjct: 995 ctgagtacatggaggaggtgc 1015
>gb|AE014178.1| Mus musculus piebald deletion region section 6 of 11 of the complete sequence Length = 400029 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 977 cagcctctttaattttcctct 997 ||||||||||||||||||||| Sbjct: 156337 cagcctctttaattttcctct 156357
>dbj|AK169373.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920193F10 product:mitofusin 2, full insert sequence Length = 4242 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 410 ctgagtacatggaggaggtgc 430 ||||||||||||||||||||| Sbjct: 984 ctgagtacatggaggaggtgc 1004
>dbj|AB169644.1| Macaca fascicularis brain cDNA, clone: QccE-10738, similar to human mitofusin 2 (MFN2), nuclear gene encoding mitochondrialprotein, mRNA, RefSeq: NM_014874.2 Length = 4099 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 410 ctgagtacatggaggaggtgc 430 ||||||||||||||||||||| Sbjct: 999 ctgagtacatggaggaggtgc 1019
>dbj|AK052689.1| Mus musculus 0 day neonate kidney cDNA, RIKEN full-length enriched library, clone:D630023P19 product:HYPERTENSION RELATED PROTEIN 1, full insert sequence Length = 3978 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 410 ctgagtacatggaggaggtgc 430 ||||||||||||||||||||| Sbjct: 980 ctgagtacatggaggaggtgc 1000
>dbj|AK049583.1| Mus musculus 7 days embryo whole body cDNA, RIKEN full-length enriched library, clone:C430046A10 product:similar to HYPERTENSION RELATED PROTEIN 1 [Mus musculus], full insert sequence Length = 2428 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 410 ctgagtacatggaggaggtgc 430 ||||||||||||||||||||| Sbjct: 989 ctgagtacatggaggaggtgc 1009
>dbj|AK042080.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630056H01 product:mitofusin 2, full insert sequence Length = 4243 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 410 ctgagtacatggaggaggtgc 430 ||||||||||||||||||||| Sbjct: 980 ctgagtacatggaggaggtgc 1000
>gb|AC019294.7| Homo sapiens chromosome , clone RP11-24M17, complete sequence Length = 164310 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1494 catggccattgtcaacaagaa 1514 ||||||||||||||||||||| Sbjct: 129959 catggccattgtcaacaagaa 129979
>emb|AL603844.7| Human DNA sequence from clone RP11-541I21 on chromosome 1, complete sequence Length = 220185 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1011 atgggctagtcctgaggagct 1031 ||||||||||||||||||||| Sbjct: 19897 atgggctagtcctgaggagct 19917
>emb|AL445209.4| Human DNA sequence from clone RP11-52L5 on chromosome 13 Contains a transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C) (TCEB1) pseudogene, a novel gene, the POU4F1 gene for POU domain, class 4, transcription factor 1 (BRN3A, RDC-1), the 3' end a novel gene (contains FLJ13449, possible ortholog of mouse 2810449K13Rik protein) and 3 CpG islands, complete sequence Length = 157302 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 977 cagcctctttaattttcctct 997 ||||||||||||||||||||| Sbjct: 28095 cagcctctttaattttcctct 28115
>dbj|AB084165.1| Rattus norvegicus mRNA for mitochondrial transmembrane GTPase FZO1A, complete cds Length = 2274 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 410 ctgagtacatggaggaggtgc 430 ||||||||||||||||||||| Sbjct: 800 ctgagtacatggaggaggtgc 820
>gb|AY028170.1| Mus musculus mitochondrial assembly regulatory factor mRNA, complete cds; nuclear gene for mitochondrial product Length = 3238 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 410 ctgagtacatggaggaggtgc 430 ||||||||||||||||||||| Sbjct: 960 ctgagtacatggaggaggtgc 980
>emb|Y11547.1|SVSNBDE S.virginiae snbDE gene, partial Length = 5994 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 176 cgtccccgccgccgttcccgccgcc 200 ||||||||||||||| ||||||||| Sbjct: 5477 cgtccccgccgccgtccccgccgcc 5501
>gb|AC171011.2| Gallus gallus BAC clone CH261-112C5 from chromosome ul, complete sequence Length = 230767 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 135 cactccttacatatccccttcctcc 159 |||||||||||| |||||||||||| Sbjct: 20706 cactccttacatctccccttcctcc 20730
>emb|CR859068.1| Pongo pygmaeus mRNA; cDNA DKFZp459G151 (from clone DKFZp459G151) Length = 4453 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 410 ctgagtacatggaggaggtgc 430 ||||||||||||||||||||| Sbjct: 987 ctgagtacatggaggaggtgc 1007
>gb|AY123975.1| Mus musculus mitofusin 2 (Mfn2) mRNA, complete cds Length = 4000 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 410 ctgagtacatggaggaggtgc 430 ||||||||||||||||||||| Sbjct: 1146 ctgagtacatggaggaggtgc 1166
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 180 cccgccgccgttcccgccgcc 200 ||||||||||||||||||||| Sbjct: 4288401 cccgccgccgttcccgccgcc 4288421
>dbj|AK122220.1| Mus musculus mRNA for mKIAA0214 protein Length = 5438 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 410 ctgagtacatggaggaggtgc 430 ||||||||||||||||||||| Sbjct: 2156 ctgagtacatggaggaggtgc 2176
>emb|AJ576252.1|HSA576252 Homo sapiens DNM1DN8.2 duplicon, map 15q24.2 Length = 4610 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1494 catggccattgtcaacaagaa 1514 ||||||||||||||||||||| Sbjct: 1024 catggccattgtcaacaagaa 1044
>gb|AY552112.1| Pouteria sericea strain Harwood 1172 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 827 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 76 ctgccccctcgcctcgccggctgcg 100 |||||||||||||||||||| |||| Sbjct: 152 ctgccccctcgcctcgccgggtgcg 176
>emb|AL954801.1| Mouse DNA sequence from clone RP23-171K6 on chromosome 2, complete sequence Length = 73066 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 241 gacaagctccagggaccatca 261 ||||||||||||||||||||| Sbjct: 8139 gacaagctccagggaccatca 8119
>emb|AL844882.9| Mouse DNA sequence from clone RP23-360H15 on chromosome 2, complete sequence Length = 167978 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 149 ccccttcctccttcctcgcccgctt 173 ||||||||||||||||| ||||||| Sbjct: 71753 ccccttcctccttcctcacccgctt 71777
>dbj|AB048831.1| Mus musculus mRNA for Fzo, complete cds Length = 2274 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 410 ctgagtacatggaggaggtgc 430 ||||||||||||||||||||| Sbjct: 800 ctgagtacatggaggaggtgc 820 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 301,775,489 Number of extensions: 15758575 Number of successful extensions: 292503 Number of sequences better than 10.0: 74 Number of HSP's gapped: 292497 Number of HSP's successfully gapped: 109 Length of query: 1779 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1756 Effective length of database: 18,503,978,556 Effective search space: 32492986344336 Effective search space used: 32492986344336 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)