ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf30g13 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK062043:Os07g0114300 | 148 | 2e-36 | 2 | AK066154:Os03g0439800 | 69 | 3e-12 | 3 | AK110410: | 31 | 0.46 | 4 | AK122075:Os03g0238300 | 30 | 1.3 | 5 | AK059494:Os03g0238300 | 30 | 1.3 | 6 | AK069641:Os01g0909500 | 29 | 1.7 | 7 | AK073865:Os06g0651300 | 29 | 2.3 | 8 | Os04g0491200:Os04g0491200 | 28 | 3.0 | 9 | AK121921:Os01g0147200 | 28 | 3.0 | 10 | AK106463:Os01g0147200 | 28 | 3.0 | 11 | AK066372:Os03g0616300 | 28 | 3.9 | 12 | Os11g0236100:Os11g0236100 | 27 | 6.6 | 13 | Os11g0451700:Os11g0451700 | 27 | 8.7 | 14 | AK110161: | 27 | 8.7 | 15 | AK121171:Os03g0752800 | 27 | 8.7 | 16 | AK111006:Os04g0447300 | 27 | 8.7 | 17 | AK110667:Os12g0634800 | 27 | 8.7 | 18 | AK108777:Os02g0119700 | 27 | 8.7 | 19 | AK102886:Os02g0288200 | 27 | 8.7 | 20 | AK065338:Os01g0851000 | 27 | 8.7 |
|---|
>AK062043:Os07g0114300 | Length = 77 Score = 148 bits (374), Expect = 2e-36 Identities = 69/77 (89%), Positives = 71/77 (92%) Frame = +1 Query: 100 MGGGNAQKSKMARERNLEKLKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAE 279 MGGGN QKSKMARERN+EK KG KGSQLEANKKAMNIQCKICMQTFICTTSE KCKEHAE Sbjct: 1 MGGGNGQKSKMARERNMEKNKGAKGSQLEANKKAMNIQCKICMQTFICTTSETKCKEHAE 60 Query: 280 AKHPKSDLVQCFPHLKQ 330 AKHPKSDL CFPHLK+ Sbjct: 61 AKHPKSDLTACFPHLKK 77
>AK066154:Os03g0439800 | Length = 90 Score = 68.6 bits (166), Expect = 3e-12 Identities = 32/38 (84%), Positives = 34/38 (89%) Frame = +1 Query: 100 MGGGNAQKSKMARERNLEKLKGGKGSQLEANKKAMNIQ 213 MGGGN QKS+MARERN+EK KG KGSQLE NKKAMNIQ Sbjct: 1 MGGGNGQKSRMARERNMEKAKGAKGSQLETNKKAMNIQ 38
>AK110410: | Length = 850 Score = 31.2 bits (69), Expect = 0.46 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = +1 Query: 52 RRTRKVSSRLAEESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEANKKA 201 RR + + R AE+ + G + ++K R R+ E+ +GG G A KKA Sbjct: 497 RRAERRARREAEKGSRRGELDEVEAKAERRRDRERERGGDGGNTLAEKKA 546
>AK122075:Os03g0238300 | Length = 495 Score = 29.6 bits (65), Expect = 1.3 Identities = 15/57 (26%), Positives = 28/57 (49%) Frame = +1 Query: 4 LLNAAASCFSPSPPNFRRTRKVSSRLAEESTAMGGGNAQKSKMARERNLEKLKGGKG 174 L+ AA + SPS PN R ++ + + A G + + A ++ + ++GG G Sbjct: 151 LVRAALNRSSPSAPNSSRDQREAKGTGGGAAAAAAGGGEIKQQAAQQKVHPVRGGIG 207
>AK059494:Os03g0238300 | Length = 495 Score = 29.6 bits (65), Expect = 1.3 Identities = 15/57 (26%), Positives = 28/57 (49%) Frame = +1 Query: 4 LLNAAASCFSPSPPNFRRTRKVSSRLAEESTAMGGGNAQKSKMARERNLEKLKGGKG 174 L+ AA + SPS PN R ++ + + A G + + A ++ + ++GG G Sbjct: 151 LVRAALNRSSPSAPNSSRDQREAKGTGGGAAAAAAGGGEIKQQAAQQKVHPVRGGIG 207
>AK069641:Os01g0909500 | Length = 320 Score = 29.3 bits (64), Expect = 1.7 Identities = 18/81 (22%), Positives = 39/81 (48%), Gaps = 2/81 (2%) Frame = +1 Query: 64 KVSSRLAEESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEAN--KKAMNIQCKICMQTF 237 K+ + + + T G +++ + N K K + ++ + K++ + C C +TF Sbjct: 245 KIEAPITDNKT--GTNTSKRGSHLQVTNPHPAKQAKRTPIKNDTPKRSASYVCNSCKKTF 302 Query: 238 ICTTSEAKCKEHAEAKHPKSD 300 S K+H++AKHP ++ Sbjct: 303 ---NSSGALKDHSKAKHPATN 320
>AK073865:Os06g0651300 | Length = 460 Score = 28.9 bits (63), Expect = 2.3 Identities = 14/40 (35%), Positives = 18/40 (45%) Frame = +1 Query: 193 KKAMNIQCKICMQTFICTTSEAKCKEHAEAKHPKSDLVQC 312 K A + C +C + TSE EH E K K+ L C Sbjct: 219 KPAQDWSCALCQ---VSATSEGALNEHLEGKRHKAKLAHC 255
>Os04g0491200:Os04g0491200 | Length = 990 Score = 28.5 bits (62), Expect = 3.0 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 5/52 (9%) Frame = +3 Query: 306 PVLPPPQAVISAKSDGEGEIKEREAVLIHLVLSCSA-----MTGC*PKLGSE 446 P L PP A++ E+ R AVL++ L SA M C P LG++ Sbjct: 531 PSLRPPPCNAEAEASSCREVHGRNAVLLYAALYISAFGDGFMRACMPPLGAD 582
>AK121921:Os01g0147200 | Length = 533 Score = 28.5 bits (62), Expect = 3.0 Identities = 16/48 (33%), Positives = 26/48 (54%) Frame = +1 Query: 55 RTRKVSSRLAEESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEANKK 198 + RK SS L + A GGG +K K R+ + + +GG+G + K+ Sbjct: 111 KKRKGSSALRD--LARGGGKEKKEKKRRKEDGREREGGRGMGMAREKR 156
>AK106463:Os01g0147200 | Length = 238 Score = 28.5 bits (62), Expect = 3.0 Identities = 16/48 (33%), Positives = 26/48 (54%) Frame = +1 Query: 55 RTRKVSSRLAEESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEANKK 198 + RK SS L + A GGG +K K R+ + + +GG+G + K+ Sbjct: 111 KKRKGSSALRD--LARGGGKEKKEKKRRKEDGREREGGRGMGMAREKR 156
>AK066372:Os03g0616300 | Length = 617 Score = 28.1 bits (61), Expect = 3.9 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 5/58 (8%) Frame = +3 Query: 198 GHEHPVQDMHADFHLHHL*SKVQ-----GARRGEASEERPCPVLPPPQAVISAKSDGE 356 G E Q+ H+DFHL + + + G E ERPC P P+ + + +G+ Sbjct: 546 GFEEERQE-HSDFHLAEMLQQEEAVDSTGPLSKERLAERPCSSTPTPKKKLKSSKEGK 602
>Os11g0236100:Os11g0236100 | Length = 1014 Score = 27.3 bits (59), Expect = 6.6 Identities = 17/52 (32%), Positives = 22/52 (42%) Frame = +1 Query: 4 LLNAAASCFSPSPPNFRRTRKVSSRLAEESTAMGGGNAQKSKMARERNLEKL 159 L + AASC P+P R S + + A GGG A S +L L Sbjct: 634 LSHVAASCDHPAPHQLLRVPPSPSSSSAAAAAAGGGGAAASSEPLSDSLRDL 685
>Os11g0451700:Os11g0451700 | Length = 326 Score = 26.9 bits (58), Expect = 8.7 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Frame = +1 Query: 52 RRTRKVSSRLAEESTAMGGGNAQKSKMARERNLEKLKGG-KGSQLEANKKA 201 RR+ SS + E MGG ++ K +E+ EKL GG KG Q + A Sbjct: 226 RRSGSSSSSSSSEDDGMGG---RRKKGIKEKIKEKLPGGNKGGQQQPTATA 273
>AK110161: | Length = 1069 Score = 26.9 bits (58), Expect = 8.7 Identities = 22/69 (31%), Positives = 32/69 (46%) Frame = +1 Query: 1 GLLNAAASCFSPSPPNFRRTRKVSSRLAEESTAMGGGNAQKSKMARERNLEKLKGGKGSQ 180 G A+ +PSPP+ +K + + S G NA S AR ++L K KG+ Sbjct: 202 GAFAETANPSTPSPPHAATQKKPTKSGSFTSFLRGRNNASNSTSAR-KSLRK----KGAL 256 Query: 181 LEANKKAMN 207 EA+K N Sbjct: 257 QEASKNGDN 265
>AK121171:Os03g0752800 | Length = 149 Score = 26.9 bits (58), Expect = 8.7 Identities = 11/28 (39%), Positives = 20/28 (71%) Frame = +3 Query: 324 QAVISAKSDGEGEIKEREAVLIHLVLSC 407 + +ISA+SD + +IK +V+ H+ +SC Sbjct: 78 KVLISAESDTQVKIKSSNSVVSHISISC 105
>AK111006:Os04g0447300 | Length = 108 Score = 26.9 bits (58), Expect = 8.7 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Frame = +1 Query: 34 PSPPNFR-RTRKVSSR-LAEESTAMGGGNAQKSKMARERNLEKLKGGKGS 177 P P N+R R+++SR STA+ G + R ++ +GG+GS Sbjct: 13 PRPRNYRCGLRRLASRWTTSPSTALAGSGPHPAAAPSTRAVQHRRGGRGS 62
>AK110667:Os12g0634800 | Length = 252 Score = 26.9 bits (58), Expect = 8.7 Identities = 10/17 (58%), Positives = 14/17 (82%) Frame = +3 Query: 279 GEASEERPCPVLPPPQA 329 GEA++E+P PV+ PP A Sbjct: 58 GEATQEQPLPVVMPPSA 74
>AK108777:Os02g0119700 | Length = 367 Score = 26.9 bits (58), Expect = 8.7 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 3/37 (8%) Frame = +3 Query: 270 ARRGEASEERPCPVLPPPQAVISAKSDG---EGEIKE 371 A RG +E P P PPP+ + A SD GE +E Sbjct: 121 AARGLLAELHPSPASPPPRPALLALSDAVCRRGEPRE 157
>AK102886:Os02g0288200 | Length = 578 Score = 26.9 bits (58), Expect = 8.7 Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 3/33 (9%) Frame = +3 Query: 282 EASEERPCPVLPPPQAVI---SAKSDGEGEIKE 371 E EER PV PPPQ +A SD E E +E Sbjct: 36 EEEEERESPVAPPPQKPSGRGAASSDEEEEEEE 68
>AK065338:Os01g0851000 | Length = 531 Score = 26.9 bits (58), Expect = 8.7 Identities = 15/57 (26%), Positives = 28/57 (49%) Frame = +1 Query: 31 SPSPPNFRRTRKVSSRLAEESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEANKKA 201 SPSPP + TR+ + + +ES + G K + R R ++ + ++ E +A Sbjct: 61 SPSPPKAKTTRRRTKKNTQESDSEGEEEPPKRRGRRTRKSKQEAEQEAAEKEDEVRA 117 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 15,585,558 Number of extensions: 329280 Number of successful extensions: 1325 Number of sequences better than 10.0: 20 Number of HSP's gapped: 1324 Number of HSP's successfully gapped: 20 Length of query: 181 Length of database: 15,399,855 Length adjustment: 94 Effective length of query: 87 Effective length of database: 11,636,001 Effective search space: 1012332087 Effective search space used: 1012332087 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
