ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf33c17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK102323:Os12g0110400 280 7e-98
2AK060105:Os11g0110100 275 2e-96
3AK069364:Os02g0505700 30 5.7
4Os02g0704600:Os02g0704600 29 7.4

>AK102323:Os12g0110400 |
          Length = 323
 Score =  280 bits (715), Expect(2) = 7e-98
 Identities = 142/180 (78%), Positives = 147/180 (81%)
 Frame = +2

Query: 338 RLLAPVKPRPQLSXXXXXXXXXXXDIAMVAAQSFVSTGESASXXXXXXXXXXXXFHKIRL 517
           RLLAPVK  P+             DIAMVAAQSFVST +SAS            FHKIRL
Sbjct: 77  RLLAPVKAPPR-PLSGEGDEEEEGDIAMVAAQSFVSTQDSASDTVVDYSVNEDEFHKIRL 135

Query: 518 LHCDFFIRKVPDPDQDVYDFREMYVTPPDTDIYSIPRVLAPMPQKYVRCAKKNFGRYHVS 697
           LHCDFFIRKVPDPD DV+DFREMYVTPPDTDIYSIPRVLAPMPQKY+RC KKNFGRYHVS
Sbjct: 136 LHCDFFIRKVPDPDDDVFDFREMYVTPPDTDIYSIPRVLAPMPQKYLRCTKKNFGRYHVS 195

Query: 698 EPPVEHLRDPLYKTEREIMKVFLTKHYRNRRFSDTDFFLDFEEIYVIDSKTRSITRAKVV 877
           EPPVEHLRDPLYKTEREIMKVFLTKHYRNRR +D DFFLDFEEIYVIDSK RSITRAKVV
Sbjct: 196 EPPVEHLRDPLYKTEREIMKVFLTKHYRNRRCNDPDFFLDFEEIYVIDSKARSITRAKVV 255



 Score = 97.4 bits (241), Expect(2) = 7e-98
 Identities = 43/48 (89%), Positives = 46/48 (95%)
 Frame = +1

Query: 922  GGESFRITDKSQRDDATTIIQREEWTKSRQDVEKHFRKLRDFDYSNWF 1065
            GGESFRI DK++RDDATT+IQREEW KSRQDVEKHFRKLRDFDYSNWF
Sbjct: 276  GGESFRIIDKTKRDDATTVIQREEWAKSRQDVEKHFRKLRDFDYSNWF 323



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>AK060105:Os11g0110100 |
          Length = 245

 Score =  275 bits (703), Expect(2) = 2e-96
 Identities = 135/156 (86%), Positives = 138/156 (88%)
 Frame = +2

Query: 410 DIAMVAAQSFVSTGESASXXXXXXXXXXXXFHKIRLLHCDFFIRKVPDPDQDVYDFREMY 589
           DIAMVAAQSFVST +SAS            FHKIRLLHCDFFIRKVPDPD DV+DFREMY
Sbjct: 22  DIAMVAAQSFVSTQDSASDTVVDYSVNEDEFHKIRLLHCDFFIRKVPDPDDDVFDFREMY 81

Query: 590 VTPPDTDIYSIPRVLAPMPQKYVRCAKKNFGRYHVSEPPVEHLRDPLYKTEREIMKVFLT 769
           VTPPDTDIYSIPRVLAPMPQKYVRC KKNFGRYHVSEPPVEHLRDPLYKTEREIMKVFLT
Sbjct: 82  VTPPDTDIYSIPRVLAPMPQKYVRCMKKNFGRYHVSEPPVEHLRDPLYKTEREIMKVFLT 141

Query: 770 KHYRNRRFSDTDFFLDFEEIYVIDSKTRSITRAKVV 877
           KHYRNRR +D DFFLDFEEIYVIDSK RSITRAKVV
Sbjct: 142 KHYRNRRCNDPDFFLDFEEIYVIDSKARSITRAKVV 177



 Score = 97.4 bits (241), Expect(2) = 2e-96
 Identities = 43/48 (89%), Positives = 46/48 (95%)
 Frame = +1

Query: 922  GGESFRITDKSQRDDATTIIQREEWTKSRQDVEKHFRKLRDFDYSNWF 1065
            GGESFRI DK++RDDATT+IQREEW KSRQDVEKHFRKLRDFDYSNWF
Sbjct: 198  GGESFRIIDKTKRDDATTVIQREEWAKSRQDVEKHFRKLRDFDYSNWF 245



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>AK069364:Os02g0505700 |
          Length = 87

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 15/56 (26%), Positives = 27/56 (48%)
 Frame = +2

Query: 878  EKGEIGEMTCYSYGTEGSLSE*LTSLKETMPPLSSKEKSGRNRDRTWRSISGSSGI 1045
            E+G++G  +  S G    ++   T+ K  +PPL   EK    + R W + +   G+
Sbjct: 20   ERGDVGRCSSCSTGVIFVVTAAATTTKPALPPLEKGEKEMDAKLRRWHTRTARMGL 75



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>Os02g0704600:Os02g0704600 |
          Length = 456

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 21/82 (25%), Positives = 38/82 (46%)
 Frame = +2

Query: 830  YVIDSKTRSITRAKVVEKGEIGEMTCYSYGTEGSLSE*LTSLKETMPPLSSKEKSGRNRD 1009
            Y+I+ K R     K + +G++G        ++GS      +L  T+PPL  + +S   ++
Sbjct: 84   YLINHKRRGPCLVKTLSQGDVG--------SDGSQQP---TLSVTLPPLPKRSQSFEAQE 132

Query: 1010 RTWRSISGSSGILTTRIGSEET 1075
              +     S+G+L    G  ET
Sbjct: 133  PEFEFQQASNGVLEGDSGVVET 154


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 31,913,248
Number of extensions: 667252
Number of successful extensions: 1502
Number of sequences better than 10.0: 4
Number of HSP's gapped: 1502
Number of HSP's successfully gapped: 6
Length of query: 488
Length of database: 15,399,855
Length adjustment: 105
Effective length of query: 383
Effective length of database: 11,195,550
Effective search space: 4287895650
Effective search space used: 4287895650
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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