ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf33c17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q8NAT9:CQ044_HUMAN Uncharacterized protein C17orf44 - Homo sapie... 35 0.80
2P0C272:YO13A_YEAST Uncharacterized protein YOL013W-A - Saccharom... 34 1.4
3Q4R305:CQ044_MACFA Uncharacterized protein C17orf44 homolog - Ma... 34 1.8
4P56945:BCAR1_HUMAN Breast cancer anti-estrogen resistance protei... 33 2.3
5P27102:TCBR_PSESQ HTH-type transcriptional regulator tcbR - Pseu... 32 5.2
6Q91636:KIF2C_XENLA Kinesin-like protein KIF2C - Xenopus laevis (... 32 5.2

>Q8NAT9:CQ044_HUMAN Uncharacterized protein C17orf44 - Homo sapiens (Human)|
          Length = 148
 Score = 35.0 bits (79), Expect = 0.80
 Identities = 17/33 (51%), Positives = 21/33 (63%)
 Frame = -1

Query: 1342 MILASGARGPEFDSRNTPHFFFTGNDLRDKNTI 1244
            MILASGARGP F SR +P   FT   +  +N +
Sbjct: 1    MILASGARGPGFKSRTSPPLPFTETRVSSRNML 33



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>P0C272:YO13A_YEAST Uncharacterized protein YOL013W-A - Saccharomyces cerevisiae (Baker's|
            yeast)
          Length = 63

 Score = 34.3 bits (77), Expect = 1.4
 Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 10/40 (25%)
 Frame = -1

Query: 1372 ETNQGVWSSGMILASG----------ARGPEFDSRNTPHF 1283
            +   GVWSSGMILA G          ARGP F+S+  P F
Sbjct: 14   QKRSGVWSSGMILALGDFLINRGTKHARGPGFNSQLAPFF 53



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>Q4R305:CQ044_MACFA Uncharacterized protein C17orf44 homolog - Macaca fascicularis (Crab|
            eating macaque) (Cynomolgus monkey)
          Length = 148

 Score = 33.9 bits (76), Expect = 1.8
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = -1

Query: 1342 MILASGARGPEFDSRNTPHFFFTGNDLRDKNTI 1244
            MILASGARGP F SR +P   F    +  +N +
Sbjct: 1    MILASGARGPGFKSRTSPPLRFAETRVSSRNVL 33



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>P56945:BCAR1_HUMAN Breast cancer anti-estrogen resistance protein 1 - Homo sapiens|
           (Human)
          Length = 870

 Score = 33.5 bits (75), Expect = 2.3
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +2

Query: 533 FIRKVPDPDQDVYDFREMYVTPPDTDIYSIPRVLAPMPQKY 655
           ++ +   P+QD YD     + P   DIY +P V   +P +Y
Sbjct: 222 YVYEAAQPEQDEYDIPRHLLAPGPQDIYDVPPVRGLLPSQY 262



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>P27102:TCBR_PSESQ HTH-type transcriptional regulator tcbR - Pseudomonas sp. (strain|
           P51)
          Length = 294

 Score = 32.3 bits (72), Expect = 5.2
 Identities = 19/80 (23%), Positives = 38/80 (47%)
 Frame = +2

Query: 683 RYHVSEPPVEHLRDPLYKTEREIMKVFLTKHYRNRRFSDTDFFLDFEEIYVIDSKTRSIT 862
           R HVS+PP+      L   E ++  V L + +R    +        +   +++   RS  
Sbjct: 24  RLHVSQPPITRQMQAL---EADLGVVLLERSHRGIELTAAGHAFLEDARRILELAGRSGD 80

Query: 863 RAKVVEKGEIGEMTCYSYGT 922
           R++   +G++GE++   +GT
Sbjct: 81  RSRAAARGDVGELSVAYFGT 100



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>Q91636:KIF2C_XENLA Kinesin-like protein KIF2C - Xenopus laevis (African clawed frog)|
          Length = 730

 Score = 32.3 bits (72), Expect = 5.2
 Identities = 21/60 (35%), Positives = 29/60 (48%)
 Frame = +2

Query: 752 MKVFLTKHYRNRRFSDTDFFLDFEEIYVIDSKTRSITRAKVVEKGEIGEMTCYSYGTEGS 931
           +KV LTK+  N+ F    F   F+E    +   R   R  V    E G+ TC++YG  GS
Sbjct: 300 LKVDLTKYLENQAFR---FDFSFDETATNEVVYRFTARPLVQSIFEGGKATCFAYGQTGS 356


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 195,505,430
Number of extensions: 3972807
Number of successful extensions: 9192
Number of sequences better than 10.0: 6
Number of HSP's gapped: 9189
Number of HSP's successfully gapped: 6
Length of query: 488
Length of database: 100,686,439
Length adjustment: 117
Effective length of query: 371
Effective length of database: 68,593,924
Effective search space: 25448345804
Effective search space used: 25448345804
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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