ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf27f09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os01g0516700:Os01g0516700 138 2e-33
2AK121672:Os02g0467700 31 0.37
3AK111797:Os11g0208900 28 4.0
4AK100040:Os11g0208900 28 4.0
5AK070030:Os02g0722400 27 6.8

>Os01g0516700:Os01g0516700 |
          Length = 433
 Score =  138 bits (347), Expect = 2e-33
 Identities = 70/93 (75%), Positives = 80/93 (86%)
 Frame = +1

Query: 55  FLHEMYMTYAATDVVVSRAGSVACTEILVTGKPAILIPLPTIVDDHQTKNAYIMADVMGA 234
           FLHE+   YAA DVVVSRAGS++CTE+LVTGKP+ILIPLPT+VDDHQTKNAYIMADVMGA
Sbjct: 314 FLHELDKAYAAADVVVSRAGSMSCTEVLVTGKPSILIPLPTMVDDHQTKNAYIMADVMGA 373

Query: 235 RVITEDELDSSSLTCIIDEIVGM*HPLTFMSYK 333
           +VITEDELDSSSL  IIDE+ G    ++ MS K
Sbjct: 374 KVITEDELDSSSLRSIIDEVFGDEKLMSDMSQK 406



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>AK121672:Os02g0467700 |
          Length = 122

 Score = 31.2 bits (69), Expect = 0.37
 Identities = 16/42 (38%), Positives = 27/42 (64%)
 Frame = +1

Query: 94  VVVSRAGSVACTEILVTGKPAILIPLPTIVDDHQTKNAYIMA 219
           +V+S AGS +  E L  GKP I++    ++D+HQ++ A  +A
Sbjct: 32  LVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELA 73



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>AK111797:Os11g0208900 |
          Length = 1074

 Score = 27.7 bits (60), Expect = 4.0
 Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
 Frame = +1

Query: 52  LFLHEMYMTYAATDVV--VSRAGSVACTEILVTGK-PAILIPLPTIVDDHQTKNAYI--- 213
           LFL    ++ +  D +  +SR   +  +   ++GK PA L  L  ++  + + N+ +   
Sbjct: 528 LFLERNKISGSIPDSIGNLSRLDYIDLSNNQLSGKIPASLFQLHNLIQINLSCNSIVGAL 587

Query: 214 MADVMGARVITEDELDSSSLTCIIDEIVGM*HPLTFM 324
            AD+ G R I + ++ S+ L   I E +G  + LT++
Sbjct: 588 PADIAGLRQIDQIDVSSNFLNGSIPESLGQLNMLTYL 624



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>AK100040:Os11g0208900 |
          Length = 1074

 Score = 27.7 bits (60), Expect = 4.0
 Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
 Frame = +1

Query: 52  LFLHEMYMTYAATDVV--VSRAGSVACTEILVTGK-PAILIPLPTIVDDHQTKNAYI--- 213
           LFL    ++ +  D +  +SR   +  +   ++GK PA L  L  ++  + + N+ +   
Sbjct: 528 LFLERNKISGSIPDSIGNLSRLDYIDLSNNQLSGKIPASLFQLHNLIQINLSCNSIVGAL 587

Query: 214 MADVMGARVITEDELDSSSLTCIIDEIVGM*HPLTFM 324
            AD+ G R I + ++ S+ L   I E +G  + LT++
Sbjct: 588 PADIAGLRQIDQIDVSSNFLNGSIPESLGQLNMLTYL 624



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>AK070030:Os02g0722400 |
          Length = 452

 Score = 26.9 bits (58), Expect = 6.8
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = +3

Query: 105 SSWFCGLH*DISHWETGNSDTLTHNCG*PSNEKCIYHGRCHGSKGH 242
           S WFCG   +I+ + +G   TLT      ++ + I    C+  +GH
Sbjct: 96  SQWFCGFFLNINFFGSGVVYTLTS----ATSMRAIQKANCYHREGH 137


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 13,178,697
Number of extensions: 273784
Number of successful extensions: 579
Number of sequences better than 10.0: 5
Number of HSP's gapped: 579
Number of HSP's successfully gapped: 5
Length of query: 162
Length of database: 15,399,855
Length adjustment: 93
Effective length of query: 69
Effective length of database: 11,676,042
Effective search space: 805646898
Effective search space used: 805646898
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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