ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf27f08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT018131.1| Zea mays clone EL01N0554D08.c mRNA sequence Length = 1060 Score = 147 bits (74), Expect = 2e-31 Identities = 140/162 (86%) Strand = Plus / Plus Query: 955 gtactcggcgcgggagcaggtgctcgccgaggtgcgcaagctggtggagcgctacaccgg 1014 |||||||||||||||||||||||| ||||||||||||||||||||||| | ||| ||| Sbjct: 22 gtactcggcgcgggagcaggtgctggccgaggtgcgcaagctggtggatctgtaccacgg 81 Query: 1015 gcagggcgaggaggtgagcgtcaccgtcaccggccacagcctcggcgccgcgctcgccgt 1074 |||||||||| |||||||||| || ||||| ||||||||||| ||| |||||| || | Sbjct: 82 gcagggcgagcaggtgagcgtgacggtcacgggccacagcctgggcagcgcgctggcgat 141 Query: 1075 gctctgcgcctacgacatcgccgagacacgcgccaacgtgtc 1116 ||| ||||||| |||| |||| ||||| ||||| |||||||| Sbjct: 142 gctgtgcgccttcgacgtcgcggagacgcgcgcgaacgtgtc 183 Score = 95.6 bits (48), Expect = 6e-16 Identities = 165/204 (80%) Strand = Plus / Plus Query: 1403 gacctcgcctgctaccacaacctcgaggcgcacctccaccttctcgacggctaccagggg 1462 |||||| | |||||||||||||| ||||||||||| ||||| || ||||||| || || Sbjct: 473 gacctctcgtgctaccacaacctggaggcgcacctgcacctgctggacggcttccgcggc 532 Query: 1463 cgcggcaaggagttcaagctcggtggcagggacccggcgctcgtcaacaaggcggccgac 1522 |||| || |||| ||| | | || |||||||| ||||| || |||||| | ||||| Sbjct: 533 tccggcgcggggttcgagccccgcgggagggaccccgcgctggtgaacaagtccaccgac 592 Query: 1523 ttcctcgtggacgagcacatggtgccgcccgtgtggcgccaggagttcaacaagggcctg 1582 |||||| ||| || ||||||||||||||||||||| ||||| | ||||||||| || Sbjct: 593 ttcctccgggaggaccacatggtgccgcccgtgtggtaccaggcggagaacaagggcatg 652 Query: 1583 gtcaggacggaggacgggcggtgg 1606 || |||||||||||||| |||||| Sbjct: 653 gtgaggacggaggacggccggtgg 676 Score = 63.9 bits (32), Expect = 2e-06 Identities = 65/76 (85%) Strand = Plus / Plus Query: 1192 gcggttcgagggtgacctgggcgtcaaggcgctgcgcatcctcaacgtgcacgactccgt 1251 |||||||||| | || |||||||| |||||||||| || | |||||||||||| ||| Sbjct: 259 gcggttcgagcgggagctgggcgtgcgggcgctgcgcgtcgtgaacgtgcacgacagcgt 318 Query: 1252 gcccaaggtgcccggc 1267 |||||||||||||||| Sbjct: 319 gcccaaggtgcccggc 334
>ref|NM_001061973.1| Oryza sativa (japonica cultivar-group) Os05g0390000 (Os05g0390000) mRNA, complete cds Length = 1437 Score = 115 bits (58), Expect = 6e-22 Identities = 136/162 (83%) Strand = Plus / Plus Query: 407 cggtggcgggagatgcacagctgcaacgactgggacggcctgctggaccccatcgaccgg 466 |||||||||||||| ||| | || ||||||||| || ||||| ||||| || |||| | Sbjct: 373 cggtggcgggagatccacgggcgcgacgactgggcggggctgctcgacccgatggacccg 432 Query: 467 acgctccgcggggagctcatccggtacggcgagttctcgcaggcctgctacgactccttc 526 ||||||| |||||||||||| |||||||||||| ||||||| ||||||||| ||||| Sbjct: 433 ctgctccgctcggagctcatccgctacggcgagttcgcgcaggcgtgctacgacgccttc 492 Query: 527 gactacgaccgcttctcccgctacgccggcacctgcaagtac 568 |||||||||| | |||||||||| ||||| |||||||||| Sbjct: 493 gactacgacccgtcctcccgctactgcggcagctgcaagtac 534 Score = 83.8 bits (42), Expect = 2e-12 Identities = 90/106 (84%) Strand = Plus / Plus Query: 1347 tcggcgtggagctggcgctcaaccacaggctctcccctttcctcaagaacgtcttcgacc 1406 ||||||||||||| |||||| |||||| || || || ||||||||| || |||||| Sbjct: 1328 tcggcgtggagctcgcgctcgaccacaagcggtcgccgttcctcaaggacacgctcgacc 1387 Query: 1407 tcgcctgctaccacaacctcgaggcgcacctccaccttctcgacgg 1452 ||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 1388 cggcctgcttccacaacctcgaggcgcacctccacctcctcgacgg 1433 Score = 67.9 bits (34), Expect = 1e-07 Identities = 73/86 (84%) Strand = Plus / Plus Query: 725 atcggcttcatcgccgtctccaccgacgaggagacggcgcggatcggccgccgggacatc 784 ||||||| | ||||||||||||||||||||||||| ||||| | ||||| || |||||| Sbjct: 691 atcggctacgtcgccgtctccaccgacgaggagaccgcgcgcctgggccggcgcgacatc 750 Query: 785 gccgtcgcctggagaggcaccgtcac 810 ||| |||| ||| | ||||| ||||| Sbjct: 751 gccatcgcgtggcgcggcacggtcac 776 Score = 50.1 bits (25), Expect = 0.031 Identities = 34/37 (91%) Strand = Plus / Plus Query: 624 cccgctacctctacgccacctcccacgcccgcttccc 660 ||||||||||||||||||||||| || ||||||||| Sbjct: 596 cccgctacctctacgccacctccaacttccgcttccc 632 Score = 46.1 bits (23), Expect = 0.49 Identities = 29/31 (93%) Strand = Plus / Plus Query: 949 ctgcaagtactcggcgcgggagcaggtgctc 979 |||||||||||| ||||| |||||||||||| Sbjct: 915 ctgcaagtactccgcgcgcgagcaggtgctc 945 Score = 46.1 bits (23), Expect = 0.49 Identities = 50/59 (84%) Strand = Plus / Plus Query: 1169 gtggggaaccctaggttcagggagcggttcgagggtgacctgggcgtcaaggcgctgcg 1227 ||||||||| | ||||||| |||| |||||||||| || || || || ||||||||||| Sbjct: 1147 gtggggaacgcgaggttcaaggagaggttcgagggggagctcggggtgaaggcgctgcg 1205
>gb|AC105773.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1562_H01, complete sequence Length = 88352 Score = 115 bits (58), Expect = 6e-22 Identities = 136/162 (83%) Strand = Plus / Minus Query: 407 cggtggcgggagatgcacagctgcaacgactgggacggcctgctggaccccatcgaccgg 466 |||||||||||||| ||| | || ||||||||| || ||||| ||||| || |||| | Sbjct: 48623 cggtggcgggagatccacgggcgcgacgactgggcggggctgctcgacccgatggacccg 48564 Query: 467 acgctccgcggggagctcatccggtacggcgagttctcgcaggcctgctacgactccttc 526 ||||||| |||||||||||| |||||||||||| ||||||| ||||||||| ||||| Sbjct: 48563 ctgctccgctcggagctcatccgctacggcgagttcgcgcaggcgtgctacgacgccttc 48504 Query: 527 gactacgaccgcttctcccgctacgccggcacctgcaagtac 568 |||||||||| | |||||||||| ||||| |||||||||| Sbjct: 48503 gactacgacccgtcctcccgctactgcggcagctgcaagtac 48462 Score = 83.8 bits (42), Expect = 2e-12 Identities = 90/106 (84%) Strand = Plus / Minus Query: 1347 tcggcgtggagctggcgctcaaccacaggctctcccctttcctcaagaacgtcttcgacc 1406 ||||||||||||| |||||| |||||| || || || ||||||||| || |||||| Sbjct: 47668 tcggcgtggagctcgcgctcgaccacaagcggtcgccgttcctcaaggacacgctcgacc 47609 Query: 1407 tcgcctgctaccacaacctcgaggcgcacctccaccttctcgacgg 1452 ||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 47608 cggcctgcttccacaacctcgaggcgcacctccacctcctcgacgg 47563 Score = 67.9 bits (34), Expect = 1e-07 Identities = 73/86 (84%) Strand = Plus / Minus Query: 725 atcggcttcatcgccgtctccaccgacgaggagacggcgcggatcggccgccgggacatc 784 ||||||| | ||||||||||||||||||||||||| ||||| | ||||| || |||||| Sbjct: 48305 atcggctacgtcgccgtctccaccgacgaggagaccgcgcgcctgggccggcgcgacatc 48246 Query: 785 gccgtcgcctggagaggcaccgtcac 810 ||| |||| ||| | ||||| ||||| Sbjct: 48245 gccatcgcgtggcgcggcacggtcac 48220 Score = 50.1 bits (25), Expect = 0.031 Identities = 34/37 (91%) Strand = Plus / Minus Query: 624 cccgctacctctacgccacctcccacgcccgcttccc 660 ||||||||||||||||||||||| || ||||||||| Sbjct: 48400 cccgctacctctacgccacctccaacttccgcttccc 48364 Score = 46.1 bits (23), Expect = 0.49 Identities = 50/59 (84%) Strand = Plus / Minus Query: 1169 gtggggaaccctaggttcagggagcggttcgagggtgacctgggcgtcaaggcgctgcg 1227 ||||||||| | ||||||| |||| |||||||||| || || || || ||||||||||| Sbjct: 47849 gtggggaacgcgaggttcaaggagaggttcgagggggagctcggggtgaaggcgctgcg 47791 Score = 46.1 bits (23), Expect = 0.49 Identities = 29/31 (93%) Strand = Plus / Minus Query: 949 ctgcaagtactcggcgcgggagcaggtgctc 979 |||||||||||| ||||| |||||||||||| Sbjct: 48081 ctgcaagtactccgcgcgcgagcaggtgctc 48051
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 115 bits (58), Expect = 6e-22 Identities = 136/162 (83%) Strand = Plus / Minus Query: 407 cggtggcgggagatgcacagctgcaacgactgggacggcctgctggaccccatcgaccgg 466 |||||||||||||| ||| | || ||||||||| || ||||| ||||| || |||| | Sbjct: 18743220 cggtggcgggagatccacgggcgcgacgactgggcggggctgctcgacccgatggacccg 18743161 Query: 467 acgctccgcggggagctcatccggtacggcgagttctcgcaggcctgctacgactccttc 526 ||||||| |||||||||||| |||||||||||| ||||||| ||||||||| ||||| Sbjct: 18743160 ctgctccgctcggagctcatccgctacggcgagttcgcgcaggcgtgctacgacgccttc 18743101 Query: 527 gactacgaccgcttctcccgctacgccggcacctgcaagtac 568 |||||||||| | |||||||||| ||||| |||||||||| Sbjct: 18743100 gactacgacccgtcctcccgctactgcggcagctgcaagtac 18743059 Score = 83.8 bits (42), Expect = 2e-12 Identities = 90/106 (84%) Strand = Plus / Minus Query: 1347 tcggcgtggagctggcgctcaaccacaggctctcccctttcctcaagaacgtcttcgacc 1406 ||||||||||||| |||||| |||||| || || || ||||||||| || |||||| Sbjct: 18742265 tcggcgtggagctcgcgctcgaccacaagcggtcgccgttcctcaaggacacgctcgacc 18742206 Query: 1407 tcgcctgctaccacaacctcgaggcgcacctccaccttctcgacgg 1452 ||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 18742205 cggcctgcttccacaacctcgaggcgcacctccacctcctcgacgg 18742160 Score = 67.9 bits (34), Expect = 1e-07 Identities = 73/86 (84%) Strand = Plus / Minus Query: 725 atcggcttcatcgccgtctccaccgacgaggagacggcgcggatcggccgccgggacatc 784 ||||||| | ||||||||||||||||||||||||| ||||| | ||||| || |||||| Sbjct: 18742902 atcggctacgtcgccgtctccaccgacgaggagaccgcgcgcctgggccggcgcgacatc 18742843 Query: 785 gccgtcgcctggagaggcaccgtcac 810 ||| |||| ||| | ||||| ||||| Sbjct: 18742842 gccatcgcgtggcgcggcacggtcac 18742817 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Minus Query: 1039 cgtcaccggccacagcctcggcgccgcgctcgccg 1073 |||||| |||||||||||||||| ||||||||||| Sbjct: 3010112 cgtcacgggccacagcctcggcggcgcgctcgccg 3010078 Score = 50.1 bits (25), Expect = 0.031 Identities = 34/37 (91%) Strand = Plus / Minus Query: 624 cccgctacctctacgccacctcccacgcccgcttccc 660 ||||||||||||||||||||||| || ||||||||| Sbjct: 18742997 cccgctacctctacgccacctccaacttccgcttccc 18742961 Score = 46.1 bits (23), Expect = 0.49 Identities = 50/59 (84%) Strand = Plus / Minus Query: 1169 gtggggaaccctaggttcagggagcggttcgagggtgacctgggcgtcaaggcgctgcg 1227 ||||||||| | ||||||| |||| |||||||||| || || || || ||||||||||| Sbjct: 18742446 gtggggaacgcgaggttcaaggagaggttcgagggggagctcggggtgaaggcgctgcg 18742388 Score = 46.1 bits (23), Expect = 0.49 Identities = 29/31 (93%) Strand = Plus / Minus Query: 949 ctgcaagtactcggcgcgggagcaggtgctc 979 |||||||||||| ||||| |||||||||||| Sbjct: 18742678 ctgcaagtactccgcgcgcgagcaggtgctc 18742648 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1702 cgccaccgctgccgccaccgcc 1723 |||||||||||||||||||||| Sbjct: 5576489 cgccaccgctgccgccaccgcc 5576510 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 gatcgacccatccatccatca 21 ||||||||||||||||||||| Sbjct: 918427 gatcgacccatccatccatca 918407
>gb|AC123526.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBa0059J06, complete sequence Length = 185449 Score = 81.8 bits (41), Expect = 9e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 1029 tgagcgtcaccgtcaccggccacagcctcggcgccgcgctcgccgtgctctgcgcctacg 1088 ||||| |||| |||||||| ||||||||||||||||||||||| |||||| |||||||| Sbjct: 165745 tgagcatcacggtcaccggacacagcctcggcgccgcgctcgcggtgctcaccgcctacg 165804 Query: 1089 acatc 1093 ||||| Sbjct: 165805 acatc 165809 Score = 44.1 bits (22), Expect = 1.9 Identities = 55/66 (83%) Strand = Plus / Plus Query: 437 tgggacggcctgctggaccccatcgaccggacgctccgcggggagctcatccggtacggc 496 |||||||||||||| |||| ||||| | ||||||| || |||||| |||| |||||| Sbjct: 165195 tgggacggcctgcttaacccgctcgacggcgcgctccggggcgagctcgtccgctacggc 165254 Query: 497 gagttc 502 |||||| Sbjct: 165255 gagttc 165260
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 81.8 bits (41), Expect = 9e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 1029 tgagcgtcaccgtcaccggccacagcctcggcgccgcgctcgccgtgctctgcgcctacg 1088 ||||| |||| |||||||| ||||||||||||||||||||||| |||||| |||||||| Sbjct: 2094190 tgagcatcacggtcaccggacacagcctcggcgccgcgctcgcggtgctcaccgcctacg 2094249 Query: 1089 acatc 1093 ||||| Sbjct: 2094250 acatc 2094254 Score = 44.1 bits (22), Expect = 1.9 Identities = 55/66 (83%) Strand = Plus / Plus Query: 437 tgggacggcctgctggaccccatcgaccggacgctccgcggggagctcatccggtacggc 496 |||||||||||||| |||| ||||| | ||||||| || |||||| |||| |||||| Sbjct: 2093640 tgggacggcctgcttaacccgctcgacggcgcgctccggggcgagctcgtccgctacggc 2093699 Query: 497 gagttc 502 |||||| Sbjct: 2093700 gagttc 2093705 Score = 42.1 bits (21), Expect = 7.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1695 ccgccaacgccaccgctgccgccaccgcc 1723 |||||||||||| ||||||||||| |||| Sbjct: 26582531 ccgccaacgccagcgctgccgccatcgcc 26582503
>gb|AY112551.1| Zea mays CL8419_1 mRNA sequence Length = 655 Score = 73.8 bits (37), Expect = 2e-09 Identities = 76/89 (85%) Strand = Plus / Minus Query: 1518 ccgacttcctcgtggacgagcacatggtgccgcccgtgtggcgccaggagttcaacaagg 1577 ||||||||||| ||| || ||||||||||||||||||||| ||||| | ||||||| Sbjct: 457 ccgacttcctccgggaggaccacatggtgccgcccgtgtggtaccaggcggagaacaagg 398 Query: 1578 gcctggtcaggacggaggacgggcggtgg 1606 || |||| |||||||||||||| |||||| Sbjct: 397 gcatggtgaggacggaggacggccggtgg 369 Score = 56.0 bits (28), Expect = 5e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 1403 gacctcgcctgctaccacaacctcgaggcgcacctccaccttctcgacggct 1454 |||||| | |||||||||||||| ||||||||||| ||||| || ||||||| Sbjct: 572 gacctctcgtgctaccacaacctggaggcgcacctgcacctgctggacggct 521
>dbj|AK243381.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100063C15, full insert sequence Length = 1366 Score = 65.9 bits (33), Expect = 5e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 1032 gcgtcaccgtcaccggccacagcctcggcgccgcgctcgcc 1072 |||||||| ||||||||||||||||||||| |||||||||| Sbjct: 510 gcgtcaccatcaccggccacagcctcggcggcgcgctcgcc 470
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 65.9 bits (33), Expect = 5e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 1032 gcgtcaccgtcaccggccacagcctcggcgccgcgctcgcc 1072 |||||||| ||||||||||||||||||||| |||||||||| Sbjct: 26068138 gcgtcaccatcaccggccacagcctcggcggcgcgctcgcc 26068098
>emb|AL713940.4|CNS07YPM Oryza sativa chromosome 12, . BAC OJ1327_A12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 161806 Score = 65.9 bits (33), Expect = 5e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 1032 gcgtcaccgtcaccggccacagcctcggcgccgcgctcgcc 1072 |||||||| ||||||||||||||||||||| |||||||||| Sbjct: 43533 gcgtcaccatcaccggccacagcctcggcggcgcgctcgcc 43573
>gb|AY104432.1| Zea mays PCO120449 mRNA sequence Length = 2218 Score = 58.0 bits (29), Expect = 1e-04 Identities = 29/29 (100%) Strand = Plus / Plus Query: 1040 gtcaccggccacagcctcggcgccgcgct 1068 ||||||||||||||||||||||||||||| Sbjct: 1390 gtcaccggccacagcctcggcgccgcgct 1418
>ref|NM_001061213.1| Oryza sativa (japonica cultivar-group) Os05g0153300 (Os05g0153300) mRNA, complete cds Length = 1638 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Plus Query: 1039 cgtcaccggccacagcctcggcgccgcgctcgccg 1073 |||||| |||||||||||||||| ||||||||||| Sbjct: 1083 cgtcacgggccacagcctcggcggcgcgctcgccg 1117
>gb|AC093493.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0072C16, complete sequence Length = 159525 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Minus Query: 1039 cgtcaccggccacagcctcggcgccgcgctcgccg 1073 |||||| |||||||||||||||| ||||||||||| Sbjct: 104128 cgtcacgggccacagcctcggcggcgcgctcgccg 104094
>ref|NM_117784.1| Arabidopsis thaliana triacylglycerol lipase (AT4G16820) mRNA, complete cds Length = 1554 Score = 52.0 bits (26), Expect = 0.008 Identities = 65/78 (83%) Strand = Plus / Plus Query: 1022 gaggaggtgagcgtcaccgtcaccggccacagcctcggcgccgcgctcgccgtgctctgc 1081 |||||| |||| ||| ||| ||||||||||||||||||||||| |||| | ||| | Sbjct: 949 gaggagctgagtatcagcgtaaccggccacagcctcggcgccgcaatcgcgcttctcgcc 1008 Query: 1082 gcctacgacatcgccgag 1099 ||| |||||||||||||| Sbjct: 1009 gccgacgacatcgccgag 1026
>gb|AF192748.1| Lampetra fluviatilis synapsin Ib (SYN I) mRNA, complete cds Length = 2098 Score = 52.0 bits (26), Expect = 0.008 Identities = 38/42 (90%) Strand = Plus / Minus Query: 1683 ccgcagccgttaccgccaacgccaccgctgccgccaccgcca 1724 |||| |||| |||||||| |||| |||||||||||||||||| Sbjct: 208 ccgccgccgctaccgccaccgccgccgctgccgccaccgcca 167
>gb|AF192747.1| Lampetra fluviatilis synapsin Ia (SYN I) mRNA, complete cds Length = 2108 Score = 52.0 bits (26), Expect = 0.008 Identities = 38/42 (90%) Strand = Plus / Minus Query: 1683 ccgcagccgttaccgccaacgccaccgctgccgccaccgcca 1724 |||| |||| |||||||| |||| |||||||||||||||||| Sbjct: 208 ccgccgccgctaccgccaccgccgccgctgccgccaccgcca 167
>emb|Z97342.2|ATFCA7 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 7 Length = 201471 Score = 52.0 bits (26), Expect = 0.008 Identities = 65/78 (83%) Strand = Plus / Plus Query: 1022 gaggaggtgagcgtcaccgtcaccggccacagcctcggcgccgcgctcgccgtgctctgc 1081 |||||| |||| ||| ||| ||||||||||||||||||||||| |||| | ||| | Sbjct: 31373 gaggagctgagtatcagcgtaaccggccacagcctcggcgccgcaatcgcgcttctcgcc 31432 Query: 1082 gcctacgacatcgccgag 1099 ||| |||||||||||||| Sbjct: 31433 gccgacgacatcgccgag 31450
>emb|AL161545.2|ATCHRIV45 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 45 Length = 199548 Score = 52.0 bits (26), Expect = 0.008 Identities = 65/78 (83%) Strand = Plus / Plus Query: 1022 gaggaggtgagcgtcaccgtcaccggccacagcctcggcgccgcgctcgccgtgctctgc 1081 |||||| |||| ||| ||| ||||||||||||||||||||||| |||| | ||| | Sbjct: 17202 gaggagctgagtatcagcgtaaccggccacagcctcggcgccgcaatcgcgcttctcgcc 17261 Query: 1082 gcctacgacatcgccgag 1099 ||| |||||||||||||| Sbjct: 17262 gccgacgacatcgccgag 17279
>ref|NM_001070918.1| Oryza sativa (japonica cultivar-group) Os10g0340800 (Os10g0340800) mRNA, partial cds Length = 814 Score = 50.1 bits (25), Expect = 0.031 Identities = 28/29 (96%) Strand = Plus / Minus Query: 1695 ccgccaacgccaccgctgccgccaccgcc 1723 |||||||||||||||| |||||||||||| Sbjct: 511 ccgccaacgccaccgccgccgccaccgcc 483
>ref|NM_001067513.1| Oryza sativa (japonica cultivar-group) Os08g0143600 (Os08g0143600) mRNA, complete cds Length = 1446 Score = 50.1 bits (25), Expect = 0.031 Identities = 52/61 (85%) Strand = Plus / Plus Query: 1017 agggcgaggaggtgagcgtcaccgtcaccggccacagcctcggcgccgcgctcgccgtgc 1076 |||| |||||||||||| |||| || ||||| |||||||| ||||| ||||| || |||| Sbjct: 917 agggggaggaggtgagcatcacggtgaccgggcacagcctgggcgcggcgctggcggtgc 976 Query: 1077 t 1077 | Sbjct: 977 t 977
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 50.1 bits (25), Expect = 0.031 Identities = 28/29 (96%) Strand = Plus / Minus Query: 1695 ccgccaacgccaccgctgccgccaccgcc 1723 |||||||||||||||| |||||||||||| Sbjct: 9507760 ccgccaacgccaccgccgccgccaccgcc 9507732 Score = 42.1 bits (21), Expect = 7.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1698 ccaacgccaccgctgccgccaccgccaac 1726 |||||||| |||| ||||||||||||||| Sbjct: 2974422 ccaacgccgccgccgccgccaccgccaac 2974450
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 50.1 bits (25), Expect = 0.031 Identities = 52/61 (85%) Strand = Plus / Plus Query: 1017 agggcgaggaggtgagcgtcaccgtcaccggccacagcctcggcgccgcgctcgccgtgc 1076 |||| |||||||||||| |||| || ||||| |||||||| ||||| ||||| || |||| Sbjct: 2400647 agggggaggaggtgagcatcacggtgaccgggcacagcctgggcgcggcgctggcggtgc 2400706 Query: 1077 t 1077 | Sbjct: 2400707 t 2400707 Score = 44.1 bits (22), Expect = 1.9 Identities = 28/30 (93%) Strand = Plus / Minus Query: 1695 ccgccaacgccaccgctgccgccaccgcca 1724 |||||| ||||||||| ||||||||||||| Sbjct: 6208326 ccgccaccgccaccgccgccgccaccgcca 6208297
>gb|AC090483.3|AC090483 Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0050M22, from chromosome 10, complete sequence Length = 145417 Score = 50.1 bits (25), Expect = 0.031 Identities = 28/29 (96%) Strand = Plus / Minus Query: 1695 ccgccaacgccaccgctgccgccaccgcc 1723 |||||||||||||||| |||||||||||| Sbjct: 141244 ccgccaacgccaccgccgccgccaccgcc 141216
>emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete genome; segment 4/29 Length = 298450 Score = 50.1 bits (25), Expect = 0.031 Identities = 25/25 (100%) Strand = Plus / Minus Query: 1055 ctcggcgccgcgctcgccgtgctct 1079 ||||||||||||||||||||||||| Sbjct: 272625 ctcggcgccgcgctcgccgtgctct 272601
>dbj|AP004381.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0025F03 Length = 138042 Score = 50.1 bits (25), Expect = 0.031 Identities = 52/61 (85%) Strand = Plus / Plus Query: 1017 agggcgaggaggtgagcgtcaccgtcaccggccacagcctcggcgccgcgctcgccgtgc 1076 |||| |||||||||||| |||| || ||||| |||||||| ||||| ||||| || |||| Sbjct: 76617 agggggaggaggtgagcatcacggtgaccgggcacagcctgggcgcggcgctggcggtgc 76676 Query: 1077 t 1077 | Sbjct: 76677 t 76677
>dbj|AK070380.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052O04, full insert sequence Length = 815 Score = 50.1 bits (25), Expect = 0.031 Identities = 28/29 (96%) Strand = Plus / Minus Query: 1695 ccgccaacgccaccgctgccgccaccgcc 1723 |||||||||||||||| |||||||||||| Sbjct: 512 ccgccaacgccaccgccgccgccaccgcc 484
>dbj|AK066322.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013062A07, full insert sequence Length = 744 Score = 50.1 bits (25), Expect = 0.031 Identities = 28/29 (96%) Strand = Plus / Minus Query: 1695 ccgccaacgccaccgctgccgccaccgcc 1723 |||||||||||||||| |||||||||||| Sbjct: 479 ccgccaacgccaccgccgccgccaccgcc 451
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 48.1 bits (24), Expect = 0.12 Identities = 33/36 (91%) Strand = Plus / Minus Query: 1688 gccgttaccgccaacgccaccgctgccgccaccgcc 1723 ||||| |||||| |||||||||||||||||| |||| Sbjct: 3157662 gccgtcaccgccgacgccaccgctgccgccagcgcc 3157627 Score = 44.1 bits (22), Expect = 1.9 Identities = 31/34 (91%) Strand = Plus / Minus Query: 1688 gccgttaccgccaacgccaccgctgccgccaccg 1721 |||||| |||||| |||| ||||||||||||||| Sbjct: 3933618 gccgttcccgccagcgccgccgctgccgccaccg 3933585
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 48.1 bits (24), Expect = 0.12 Identities = 27/28 (96%) Strand = Plus / Minus Query: 1045 cggccacagcctcggcgccgcgctcgcc 1072 |||||||||||| ||||||||||||||| Sbjct: 2612246 cggccacagcctgggcgccgcgctcgcc 2612219
>emb|BX248343.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 10/14 Length = 307550 Score = 48.1 bits (24), Expect = 0.12 Identities = 33/36 (91%) Strand = Plus / Minus Query: 1688 gccgttaccgccaacgccaccgctgccgccaccgcc 1723 ||||| |||||| |||||||||||||||||| |||| Sbjct: 302468 gccgtcaccgccgacgccaccgctgccgccagcgcc 302433
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 48.1 bits (24), Expect = 0.12 Identities = 30/32 (93%) Strand = Plus / Plus Query: 1041 tcaccggccacagcctcggcgccgcgctcgcc 1072 ||||||| ||||||||||||| |||||||||| Sbjct: 33230541 tcaccgggcacagcctcggcggcgcgctcgcc 33230572 Score = 44.1 bits (22), Expect = 1.9 Identities = 28/30 (93%) Strand = Plus / Minus Query: 1694 accgccaacgccaccgctgccgccaccgcc 1723 ||||||| ||||||||||||||||||||| Sbjct: 26382802 accgccactgccaccgctgccgccaccgcc 26382773 Score = 42.1 bits (21), Expect = 7.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1035 tcaccgtcaccggccacagcctcggcgcc 1063 ||||||||| |||||||||||| |||||| Sbjct: 26295598 tcaccgtcatcggccacagcctgggcgcc 26295626 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 628 ctacctctacgccacctcccacgcc 652 ||||||||||||||||||| ||||| Sbjct: 29525636 ctacctctacgccacctccgacgcc 29525612 Score = 42.1 bits (21), Expect = 7.6 Identities = 66/81 (81%) Strand = Plus / Plus Query: 1019 ggcgaggaggtgagcgtcaccgtcaccggccacagcctcggcgccgcgctcgccgtgctc 1078 |||||||| || |||||||| || ||||||||||| | ||| |||||| || | ||| Sbjct: 39171190 ggcgaggacgtcagcgtcacgctcgccggccacagcatgggcagcgcgctggcgctcctc 39171249 Query: 1079 tgcgcctacgacatcgccgag 1099 | |||||||||| |||||||| Sbjct: 39171250 tccgcctacgacctcgccgag 39171270
>emb|BX842581.1| Mycobacterium tuberculosis H37Rv complete genome; segment 10/13 Length = 348676 Score = 48.1 bits (24), Expect = 0.12 Identities = 33/36 (91%) Strand = Plus / Minus Query: 1688 gccgttaccgccaacgccaccgctgccgccaccgcc 1723 ||||| |||||| |||||||||||||||||| |||| Sbjct: 44415 gccgtcaccgccgacgccaccgctgccgccagcgcc 44380
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 48.1 bits (24), Expect = 0.12 Identities = 27/28 (96%) Strand = Plus / Minus Query: 1045 cggccacagcctcggcgccgcgctcgcc 1072 |||||||||||| ||||||||||||||| Sbjct: 792282 cggccacagcctgggcgccgcgctcgcc 792255
>dbj|AP003406.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1070A12 Length = 148449 Score = 48.1 bits (24), Expect = 0.12 Identities = 30/32 (93%) Strand = Plus / Plus Query: 1041 tcaccggccacagcctcggcgccgcgctcgcc 1072 ||||||| ||||||||||||| |||||||||| Sbjct: 23788 tcaccgggcacagcctcggcggcgcgctcgcc 23819
>ref|XM_001102633.1| PREDICTED: Macaca mulatta similar to RNA-binding protein Raly (hnRNP associated with lethal yellow homolog) (Autoantigen p542) (RALY), mRNA Length = 1932 Score = 46.1 bits (23), Expect = 0.49 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1702 cgccaccgctgccgccaccgcca 1724 ||||||||||||||||||||||| Sbjct: 752 cgccaccgctgccgccaccgcca 730
>gb|BC068895.1| Xenopus laevis hypothetical protein MGC83087, mRNA (cDNA clone MGC:83087 IMAGE:6317023), complete cds Length = 2178 Score = 46.1 bits (23), Expect = 0.49 Identities = 26/27 (96%) Strand = Plus / Minus Query: 1664 ctcgctgagctcggagttgccgcagcc 1690 ||||||||||||||||||||| ||||| Sbjct: 233 ctcgctgagctcggagttgccacagcc 207
>gb|AC118674.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0093J20, from chromosome 3, complete sequence Length = 148635 Score = 46.1 bits (23), Expect = 0.49 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1694 accgccaacgccaccgctgccgccaccgcca 1724 ||||||| ||||||||| ||||||||||||| Sbjct: 71811 accgccaccgccaccgccgccgccaccgcca 71841
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 46.1 bits (23), Expect = 0.49 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1694 accgccaacgccaccgctgccgccaccgcca 1724 ||||||| ||||||||| ||||||||||||| Sbjct: 11679479 accgccaccgccaccgccgccgccaccgcca 11679509
>gb|AC010235.7| Homo sapiens chromosome 5 clone CTC-339D2, complete sequence Length = 228600 Score = 46.1 bits (23), Expect = 0.49 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1702 cgccaccgctgccgccaccgcca 1724 ||||||||||||||||||||||| Sbjct: 213632 cgccaccgctgccgccaccgcca 213654
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 46.1 bits (23), Expect = 0.49 Identities = 26/27 (96%) Strand = Plus / Minus Query: 723 tcatcggcttcatcgccgtctccaccg 749 |||||||||||||||||||| |||||| Sbjct: 1670689 tcatcggcttcatcgccgtcaccaccg 1670663
>gb|AC008546.6|AC008546 Homo sapiens chromosome 5 clone CTC-501K1, complete sequence Length = 205954 Score = 46.1 bits (23), Expect = 0.49 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1702 cgccaccgctgccgccaccgcca 1724 ||||||||||||||||||||||| Sbjct: 122798 cgccaccgctgccgccaccgcca 122820
>gb|AC124243.3| Homo sapiens chromosome 8, clone CTD-3077F2, complete sequence Length = 188240 Score = 46.1 bits (23), Expect = 0.49 Identities = 38/43 (88%) Strand = Plus / Plus Query: 1681 tgccgcagccgttaccgccaacgccaccgctgccgccaccgcc 1723 |||||| |||| |||||||| ||||||||| ||||||||||| Sbjct: 184606 tgccgccgccgctaccgccaccgccaccgccaccgccaccgcc 184648
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 46.1 bits (23), Expect = 0.49 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1045 cggccacagcctcggcgccgcgctcgc 1071 |||||||||||| |||||||||||||| Sbjct: 2219178 cggccacagcctgggcgccgcgctcgc 2219204
>gb|CP000480.1| Mycobacterium smegmatis str. MC2 155, complete genome Length = 6988209 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 601 caccggcgtcggctacgaggta 622 |||||||||||||||||||||| Sbjct: 4753612 caccggcgtcggctacgaggta 4753633
>gb|CP000478.1| Syntrophobacter fumaroxidans MPOB, complete genome Length = 4990251 Score = 44.1 bits (22), Expect = 1.9 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1695 ccgccaacgccaccgctgccgccaccgcca 1724 |||||| ||||||||| ||||||||||||| Sbjct: 4736606 ccgccaccgccaccgccgccgccaccgcca 4736635 Score = 44.1 bits (22), Expect = 1.9 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1695 ccgccaacgccaccgctgccgccaccgcca 1724 |||||| ||||||||| ||||||||||||| Sbjct: 4736624 ccgccaccgccaccgccgccgccaccgcca 4736653 Score = 44.1 bits (22), Expect = 1.9 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1695 ccgccaacgccaccgctgccgccaccgcca 1724 |||||| ||||||||| ||||||||||||| Sbjct: 4736642 ccgccaccgccaccgccgccgccaccgcca 4736671
>dbj|AK233650.1| Sus scrofa mRNA, clone:LVRM10196B05, expressed in liver Length = 1849 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1702 cgccaccgctgccgccaccgcc 1723 |||||||||||||||||||||| Sbjct: 274 cgccaccgctgccgccaccgcc 253
>dbj|AK233602.1| Sus scrofa mRNA, clone:LVRM10184E06, expressed in liver Length = 1622 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1702 cgccaccgctgccgccaccgcc 1723 |||||||||||||||||||||| Sbjct: 260 cgccaccgctgccgccaccgcc 239
>dbj|AK239951.1| Sus scrofa mRNA, clone:UTR010014G07, expressed in uterus Length = 1516 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1702 cgccaccgctgccgccaccgcc 1723 |||||||||||||||||||||| Sbjct: 302 cgccaccgctgccgccaccgcc 281
>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence Length = 7497934 Score = 44.1 bits (22), Expect = 1.9 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1694 accgccaacgccaccgctgccgccaccgccaacg 1727 ||||||||||||||||| |||||||||||||| Sbjct: 1600460 accgccaacgccaccgccaacgccaccgccaacg 1600493
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1702 cgccaccgctgccgccaccgcc 1723 |||||||||||||||||||||| Sbjct: 472079 cgccaccgctgccgccaccgcc 472058
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 44.1 bits (22), Expect = 1.9 Identities = 25/26 (96%) Strand = Plus / Minus Query: 985 ggtgcgcaagctggtggagcgctaca 1010 ||||||||| |||||||||||||||| Sbjct: 3743968 ggtgcgcaacctggtggagcgctaca 3743943 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 967 ggagcaggtgctcgccgaggtgcgc 991 |||||||||||| |||||||||||| Sbjct: 1811316 ggagcaggtgctggccgaggtgcgc 1811340 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 971 caggtgctcgccgaggtgcgc 991 ||||||||||||||||||||| Sbjct: 4725762 caggtgctcgccgaggtgcgc 4725782
>gb|AC151612.2| Emiliania huxleyi clone JGIACCU-13I1, complete sequence Length = 35427 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1702 cgccaccgctgccgccaccgcc 1723 |||||||||||||||||||||| Sbjct: 18251 cgccaccgctgccgccaccgcc 18272
>gb|AY023070.1| Oryza sativa microsatellite MRG5395 containing (GAC)X10, genomic sequence Length = 230 Score = 44.1 bits (22), Expect = 1.9 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1702 cgccaccgctgccgccaccgccaacg 1727 |||||||||||||||| ||||||||| Sbjct: 64 cgccaccgctgccgccgccgccaacg 39
>gb|AC145271.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1140B01, complete sequence Length = 135184 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1702 cgccaccgctgccgccaccgcc 1723 |||||||||||||||||||||| Sbjct: 109698 cgccaccgctgccgccaccgcc 109719
>gb|AC130730.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0681D04, complete sequence Length = 163670 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1702 cgccaccgctgccgccaccgcc 1723 |||||||||||||||||||||| Sbjct: 453 cgccaccgctgccgccaccgcc 474
>gb|AC087726.36| Chlamydomonas reinhardtii clone cr-40a20, complete sequence Length = 168794 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1702 cgccaccgctgccgccaccgcc 1723 |||||||||||||||||||||| Sbjct: 74408 cgccaccgctgccgccaccgcc 74429
>dbj|AK075169.1| Homo sapiens cDNA FLJ90688 fis, clone PLACE1006208, highly similar to Homo sapiens nGAP mRNA Length = 1914 Score = 44.1 bits (22), Expect = 1.9 Identities = 37/42 (88%) Strand = Plus / Plus Query: 1682 gccgcagccgttaccgccaacgccaccgctgccgccaccgcc 1723 ||||| |||| |||||||| ||||||||| ||||||||||| Sbjct: 55 gccgccgccgctaccgccaccgccaccgccaccgccaccgcc 96
>gb|BC114097.1| Bos taurus hypothetical protein LOC767890, mRNA (cDNA clone IMAGE:8167074), partial cds Length = 2474 Score = 44.1 bits (22), Expect = 1.9 Identities = 28/30 (93%) Strand = Plus / Minus Query: 1695 ccgccaacgccaccgctgccgccaccgcca 1724 |||||| |||||||||| |||||||||||| Sbjct: 205 ccgccaccgccaccgctaccgccaccgcca 176
>gb|AC008691.7| Homo sapiens chromosome 5 clone CTB-63A22, complete sequence Length = 153267 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1919 taaatcattgtatgccaataaa 1940 |||||||||||||||||||||| Sbjct: 16300 taaatcattgtatgccaataaa 16321
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 44.1 bits (22), Expect = 1.9 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1702 cgccaccgctgccgccaccgccaacg 1727 |||||||||||||||| ||||||||| Sbjct: 25612873 cgccaccgctgccgccgccgccaacg 25612848
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 37 tctccagctactacgtacgtac 58 |||||||||||||||||||||| Sbjct: 19719130 tctccagctactacgtacgtac 19719109 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1704 ccaccgctgccgccaccgcca 1724 ||||||||||||||||||||| Sbjct: 19955682 ccaccgctgccgccaccgcca 19955702 Score = 42.1 bits (21), Expect = 7.6 Identities = 39/45 (86%) Strand = Plus / Plus Query: 1017 agggcgaggaggtgagcgtcaccgtcaccggccacagcctcggcg 1061 ||||||||||| | ||| |||| ||| ||||||||||||||||| Sbjct: 26399309 agggcgaggagctcagcatcacggtcgtcggccacagcctcggcg 26399353 Score = 42.1 bits (21), Expect = 7.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1044 ccggccacagcctcggcgccgcgctcgcc 1072 |||| ||||||||||||| |||||||||| Sbjct: 32320431 ccgggcacagcctcggcggcgcgctcgcc 32320403
>gb|AE009867.1|AE009867 Pyrobaculum aerophilum strain IM2 section 122 of 201 of the complete genome Length = 6790 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1702 cgccaccgctgccgccaccgcc 1723 |||||||||||||||||||||| Sbjct: 3279 cgccaccgctgccgccaccgcc 3300
>emb|AL121911.15|HSDJ989D7 Human DNA sequence from clone RP5-989D7 on chromosome 20 Contains part of a novel gene, complete sequence Length = 119790 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1780 attaattgcaagtatatatata 1801 |||||||||||||||||||||| Sbjct: 56740 attaattgcaagtatatatata 56719
>gb|AF232004.3| Pseudomonas syringae pv. tomato strain DC3000 Hrp pathogenicity island, complete sequence Length = 52498 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1702 cgccaccgctgccgccaccgcc 1723 |||||||||||||||||||||| Sbjct: 43797 cgccaccgctgccgccaccgcc 43776
>emb|BX842583.1| Mycobacterium tuberculosis H37Rv complete genome; segment 12/13 Length = 349606 Score = 44.1 bits (22), Expect = 1.9 Identities = 31/34 (91%) Strand = Plus / Minus Query: 1688 gccgttaccgccaacgccaccgctgccgccaccg 1721 |||||| |||||| |||| ||||||||||||||| Sbjct: 123196 gccgttcccgccagcgccgccgctgccgccaccg 123163
>emb|BX248346.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 13/14 Length = 316050 Score = 44.1 bits (22), Expect = 1.9 Identities = 31/34 (91%) Strand = Plus / Minus Query: 1688 gccgttaccgccaacgccaccgctgccgccaccg 1721 |||||| |||||| |||| ||||||||||||||| Sbjct: 133609 gccgttcccgccagcgccgccgctgccgccaccg 133576
>dbj|AP003710.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0032K15 Length = 126195 Score = 44.1 bits (22), Expect = 1.9 Identities = 28/30 (93%) Strand = Plus / Minus Query: 1694 accgccaacgccaccgctgccgccaccgcc 1723 ||||||| ||||||||||||||||||||| Sbjct: 56667 accgccactgccaccgctgccgccaccgcc 56638
>dbj|AP003573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0523F01 Length = 146419 Score = 44.1 bits (22), Expect = 1.9 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1702 cgccaccgctgccgccaccgccaacg 1727 |||||||||||||||| ||||||||| Sbjct: 131190 cgccaccgctgccgccgccgccaacg 131165
>dbj|AP003571.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0458E02 Length = 154458 Score = 44.1 bits (22), Expect = 1.9 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1702 cgccaccgctgccgccaccgccaacg 1727 |||||||||||||||| ||||||||| Sbjct: 36318 cgccaccgctgccgccgccgccaacg 36293
>dbj|AP005798.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1136H02 Length = 145086 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 37 tctccagctactacgtacgtac 58 |||||||||||||||||||||| Sbjct: 75888 tctccagctactacgtacgtac 75867
>dbj|AP004156.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_G07 Length = 149119 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 37 tctccagctactacgtacgtac 58 |||||||||||||||||||||| Sbjct: 27681 tctccagctactacgtacgtac 27660
>dbj|AP003875.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1119_C05 Length = 126112 Score = 44.1 bits (22), Expect = 1.9 Identities = 28/30 (93%) Strand = Plus / Minus Query: 1695 ccgccaacgccaccgctgccgccaccgcca 1724 |||||| ||||||||| ||||||||||||| Sbjct: 71719 ccgccaccgccaccgccgccgccaccgcca 71690
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 716 ggcaccttcatcggcttcatcg 737 |||||||||||||||||||||| Sbjct: 3655242 ggcaccttcatcggcttcatcg 3655263 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 982 cgaggtgcgcaagctggtggagcgc 1006 ||||||||||||||||| ||||||| Sbjct: 1495817 cgaggtgcgcaagctggcggagcgc 1495841 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1038 ccgtcaccggccacagcctcggcgc 1062 |||||||||||||||||| |||||| Sbjct: 2264554 ccgtcaccggccacagccacggcgc 2264530
>gb|AF005221.1|AF005221 Pseudomonas syringae hrp-secreted protein HrpW (hrpW) gene, complete cds Length = 1729 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1702 cgccaccgctgccgccaccgcc 1723 |||||||||||||||||||||| Sbjct: 917 cgccaccgctgccgccaccgcc 896
>emb|AL831738.4| Mouse DNA sequence from clone RP23-451K12 on chromosome 4, complete sequence Length = 188894 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1243 cgactccgtgcccaaggtgccc 1264 |||||||||||||||||||||| Sbjct: 182382 cgactccgtgcccaaggtgccc 182403
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1702 cgccaccgctgccgccaccgcc 1723 |||||||||||||||||||||| Sbjct: 1510166 cgccaccgctgccgccaccgcc 1510187
>emb|CR855051.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0114I04, complete sequence Length = 102415 Score = 42.1 bits (21), Expect = 7.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1695 ccgccaacgccaccgctgccgccaccgcc 1723 |||||||||||| ||||||||||| |||| Sbjct: 88703 ccgccaacgccagcgctgccgccatcgcc 88731
>dbj|AK242904.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J090082C03, full insert sequence Length = 1296 Score = 42.1 bits (21), Expect = 7.6 Identities = 66/81 (81%) Strand = Plus / Plus Query: 1019 ggcgaggaggtgagcgtcaccgtcaccggccacagcctcggcgccgcgctcgccgtgctc 1078 |||||||| || |||||||| || ||||||||||| | ||| |||||| || | ||| Sbjct: 551 ggcgaggacgtcagcgtcacgctcgccggccacagcatgggcagcgcgctggcgctcctc 610 Query: 1079 tgcgcctacgacatcgccgag 1099 | |||||||||| |||||||| Sbjct: 611 tccgcctacgacctcgccgag 631
>ref|NM_001054764.1| Oryza sativa (japonica cultivar-group) Os02g0767200 (Os02g0767200) mRNA, complete cds Length = 1781 Score = 42.1 bits (21), Expect = 7.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1044 ccggccacagcctcggcgccgcgctcgcc 1072 |||| ||||||||||||| |||||||||| Sbjct: 997 ccgggcacagcctcggcggcgcgctcgcc 1025
>ref|NM_001054142.1| Oryza sativa (japonica cultivar-group) Os02g0653900 (Os02g0653900) mRNA, complete cds Length = 1961 Score = 42.1 bits (21), Expect = 7.6 Identities = 39/45 (86%) Strand = Plus / Plus Query: 1017 agggcgaggaggtgagcgtcaccgtcaccggccacagcctcggcg 1061 ||||||||||| | ||| |||| ||| ||||||||||||||||| Sbjct: 1171 agggcgaggagctcagcatcacggtcgtcggccacagcctcggcg 1215
>ref|NM_001051640.1| Oryza sativa (japonica cultivar-group) Os01g0900400 (Os01g0900400) mRNA, complete cds Length = 1344 Score = 42.1 bits (21), Expect = 7.6 Identities = 66/81 (81%) Strand = Plus / Plus Query: 1019 ggcgaggaggtgagcgtcaccgtcaccggccacagcctcggcgccgcgctcgccgtgctc 1078 |||||||| || |||||||| || ||||||||||| | ||| |||||| || | ||| Sbjct: 799 ggcgaggacgtcagcgtcacgctcgccggccacagcatgggcagcgcgctggcgctcctc 858 Query: 1079 tgcgcctacgacatcgccgag 1099 | |||||||||| |||||||| Sbjct: 859 tccgcctacgacctcgccgag 879
>ref|NM_001050576.1| Oryza sativa (japonica cultivar-group) Os01g0710700 (Os01g0710700) mRNA, complete cds Length = 1920 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 628 ctacctctacgccacctcccacgcc 652 ||||||||||||||||||| ||||| Sbjct: 386 ctacctctacgccacctccgacgcc 410
>ref|NM_001050265.1| Oryza sativa (japonica cultivar-group) Os01g0651200 (Os01g0651200) mRNA, complete cds Length = 1257 Score = 42.1 bits (21), Expect = 7.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1035 tcaccgtcaccggccacagcctcggcgcc 1063 ||||||||| |||||||||||| |||||| Sbjct: 680 tcaccgtcatcggccacagcctgggcgcc 708
>gb|CP000453.1| Alkalilimnicola ehrlichei MLHE-1, complete genome Length = 3275944 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 985 ggtgcgcaagctggtggagcgctac 1009 ||||||||||||| ||||||||||| Sbjct: 2160226 ggtgcgcaagctgatggagcgctac 2160250
>emb|AM260480.1| Ralstonia eutropha H16 chromosome 2 Length = 2912490 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1644 cggaagacaccgatctgcacctcgc 1668 |||||||| |||||||||||||||| Sbjct: 1096676 cggaagacgccgatctgcacctcgc 1096700
>gb|AE014298.4| Drosophila melanogaster chromosome X, complete sequence Length = 22422827 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1693 taccgccaacgccaccgctgccgcc 1717 |||||||||||||||||| |||||| Sbjct: 18406428 taccgccaacgccaccgccgccgcc 18406452
>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence Length = 27905053 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 635 tacgccacctcccacgcccgc 655 ||||||||||||||||||||| Sbjct: 3669616 tacgccacctcccacgcccgc 3669636
>ref|XM_001111496.1| PREDICTED: Macaca mulatta synaptotagmin VI (SYT6), mRNA Length = 4292 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 523 cttcgactacgaccgcttctcccgc 547 |||||||| |||||||||||||||| Sbjct: 948 cttcgacttcgaccgcttctcccgc 972
>gb|CP000386.1| Rubrobacter xylanophilus DSM 9941, complete genome Length = 3225748 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 735 tcgccgtctccaccgacgagg 755 ||||||||||||||||||||| Sbjct: 2552221 tcgccgtctccaccgacgagg 2552201
>gb|CP000113.1| Myxococcus xanthus DK 1622, complete genome Length = 9139763 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 984 aggtgcgcaagctggtggagc 1004 ||||||||||||||||||||| Sbjct: 3627833 aggtgcgcaagctggtggagc 3627813
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1503 tcgtcaacaaggcggccgact 1523 ||||||||||||||||||||| Sbjct: 2896363 tcgtcaacaaggcggccgact 2896343
>gb|AY597281.1| Pseudomonas viridiflava strain ME3.1b pathogenicity island PAI-Region-2, partial sequence Length = 39776 Score = 42.1 bits (21), Expect = 7.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1694 accgccaacgccaccgctgccgccaccgccaac 1726 ||||||| ||||||||| |||||||||||||| Sbjct: 26449 accgccaccgccaccgccaccgccaccgccaac 26481
>ref|XM_360329.1| Magnaporthe grisea 70-15 hypothetical protein (MG05703.4) partial mRNA Length = 2268 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1704 ccaccgctgccgccaccgcca 1724 ||||||||||||||||||||| Sbjct: 1229 ccaccgctgccgccaccgcca 1209
>ref|NM_100557.1| Arabidopsis thaliana triacylglycerol lipase (AT1G06800) mRNA, complete cds Length = 1646 Score = 42.1 bits (21), Expect = 7.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 773 cgccgggacatcgccgtcgcctggagaggcaccgtcacaaagctcgagtggat 825 ||||| ||||| ||| ||||||||||||| || ||||| |||||||||||| Sbjct: 868 cgccgcgacattgccatcgcctggagagggactgtcacgcggctcgagtggat 920
>ref|NM_179272.1| Arabidopsis thaliana triacylglycerol lipase (AT1G06800) mRNA, complete cds Length = 2053 Score = 42.1 bits (21), Expect = 7.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 773 cgccgggacatcgccgtcgcctggagaggcaccgtcacaaagctcgagtggat 825 ||||| ||||| ||| ||||||||||||| || ||||| |||||||||||| Sbjct: 868 cgccgcgacattgccatcgcctggagagggactgtcacgcggctcgagtggat 920
>gb|AY785361.1| Anopheles gambiae male-specific transcription factor FRU-MA (fru) mRNA, complete cds Length = 2974 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1703 gccaccgctgccgccaccgcc 1723 ||||||||||||||||||||| Sbjct: 2624 gccaccgctgccgccaccgcc 2604
>gb|AC078977.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0496H07, complete sequence Length = 164477 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 gatcgacccatccatccatca 21 ||||||||||||||||||||| Sbjct: 151906 gatcgacccatccatccatca 151886
>gb|AC112997.10| Mus musculus chromosome 8, clone RP24-484I6, complete sequence Length = 191413 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1244 gactccgtgcccaaggtgccc 1264 ||||||||||||||||||||| Sbjct: 70969 gactccgtgcccaaggtgccc 70989
>gb|AC153564.6| Mus musculus 10 BAC RP23-39C23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 241022 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1244 gactccgtgcccaaggtgccc 1264 ||||||||||||||||||||| Sbjct: 87140 gactccgtgcccaaggtgccc 87120
>gb|AC125124.4| Mus musculus BAC clone RP24-273N19 from chromosome 16, complete sequence Length = 188199 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1244 gactccgtgcccaaggtgccc 1264 ||||||||||||||||||||| Sbjct: 32011 gactccgtgcccaaggtgccc 32031
>gb|AC166096.2| Mus musculus BAC clone RP24-467F14 from chromosome 9, complete sequence Length = 142142 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1244 gactccgtgcccaaggtgccc 1264 ||||||||||||||||||||| Sbjct: 125224 gactccgtgcccaaggtgccc 125204
>gb|AC093360.7| Mus musculus chromosome 3, clone RP23-57F18, complete sequence Length = 275076 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1244 gactccgtgcccaaggtgccc 1264 ||||||||||||||||||||| Sbjct: 226686 gactccgtgcccaaggtgccc 226666
>ref|XM_543959.2| PREDICTED: Canis familiaris similar to Lysyl oxidase homolog 4 precursor (Lysyl oxidase-like protein 4) (Lysyl oxidase related protein C) (LOC486830), mRNA Length = 2467 Score = 42.1 bits (21), Expect = 7.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1696 cgccaacgccaccgctgccgccaccgcca 1724 ||||| ||||||||| ||||||||||||| Sbjct: 17 cgccaccgccaccgccgccgccaccgcca 45
>gb|AC115810.17| Mus musculus chromosome 16, clone RP23-417P10, complete sequence Length = 221406 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1244 gactccgtgcccaaggtgccc 1264 ||||||||||||||||||||| Sbjct: 133310 gactccgtgcccaaggtgccc 133330
>gb|AC134923.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0030I07, complete sequence Length = 122733 Score = 42.1 bits (21), Expect = 7.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1695 ccgccaacgccaccgctgccgccaccgcc 1723 |||||||||||| ||||||||||| |||| Sbjct: 44789 ccgccaacgccagcgctgccgccatcgcc 44761
>ref|XM_540243.2| PREDICTED: Canis familiaris similar to Synaptotagmin-6 (Synaptotagmin VI) (SytVI) (LOC483127), mRNA Length = 1601 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 523 cttcgactacgaccgcttctcccgc 547 |||||||| |||||||||||||||| Sbjct: 948 cttcgacttcgaccgcttctcccgc 972
>gb|AC132388.3| Mus musculus BAC clone RP23-443H3 from chromosome 3, complete sequence Length = 200490 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1244 gactccgtgcccaaggtgccc 1264 ||||||||||||||||||||| Sbjct: 107356 gactccgtgcccaaggtgccc 107376
>ref|NM_169197.2| Drosophila melanogaster CG31187-RA (CG31187), mRNA Length = 6242 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 635 tacgccacctcccacgcccgc 655 ||||||||||||||||||||| Sbjct: 349 tacgccacctcccacgcccgc 369
>gb|AC154580.2| Mus musculus BAC clone RP23-380H1 from chromosome 14, complete sequence Length = 187377 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1244 gactccgtgcccaaggtgccc 1264 ||||||||||||||||||||| Sbjct: 44743 gactccgtgcccaaggtgccc 44763
>gb|AC135643.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0023F01, complete sequence Length = 145009 Score = 42.1 bits (21), Expect = 7.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1695 ccgccaacgccaccgctgccgccaccgcc 1723 |||||||||||| ||||||||||| |||| Sbjct: 7189 ccgccaacgccagcgctgccgccatcgcc 7217
>gb|AC104325.28| Mus musculus strain C57BL/6J clone rp23-204m3 map 15, complete sequence Length = 224086 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1375 gctctcccctttcctcaagaa 1395 ||||||||||||||||||||| Sbjct: 145643 gctctcccctttcctcaagaa 145623
>emb|CT025590.5| Mouse DNA sequence from clone RP24-132A1 on chromosome 14, complete sequence Length = 193572 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1244 gactccgtgcccaaggtgccc 1264 ||||||||||||||||||||| Sbjct: 105362 gactccgtgcccaaggtgccc 105342
>ref|XM_801666.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1 (DGF-1) (Tc00.1047053506039.30) partial mRNA Length = 5569 Score = 42.1 bits (21), Expect = 7.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1695 ccgccaacgccaccgctgccgccaccgcc 1723 |||||| ||||||||| |||||||||||| Sbjct: 16 ccgccaccgccaccgccgccgccaccgcc 44
>gb|AE011986.1| Xanthomonas axonopodis pv. citri str. 306, section 364 of 469 of the complete genome Length = 10486 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1653 ccgatctgcacctcgctgagc 1673 ||||||||||||||||||||| Sbjct: 8047 ccgatctgcacctcgctgagc 8027
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 951 gcaagtactcggcgcgggagc 971 ||||||||||||||||||||| Sbjct: 2568890 gcaagtactcggcgcgggagc 2568910
>gb|AY099599.1| Arabidopsis thaliana lipase, putative (At1g06800) mRNA, complete cds Length = 1653 Score = 42.1 bits (21), Expect = 7.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 773 cgccgggacatcgccgtcgcctggagaggcaccgtcacaaagctcgagtggat 825 ||||| ||||| ||| ||||||||||||| || ||||| |||||||||||| Sbjct: 647 cgccgcgacattgccatcgcctggagagggactgtcacgcggctcgagtggat 699
>gb|AF462455.1| Plasmodium falciparum isolate S5-5 merozoite surface protein 1 (MSP-1) gene, partial cds Length = 195 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 939 actgcaagtactgcaagtact 959 ||||||||||||||||||||| Sbjct: 139 actgcaagtactgcaagtact 159
>emb|CR728780.2|CNS0GP9U Tetraodon nigroviridis full-length cDNA Length = 1344 Score = 42.1 bits (21), Expect = 7.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 718 caccttcatcggcttcatcgccgtctcca 746 ||||||||||| || |||||||||||||| Sbjct: 720 caccttcatcgtctacatcgccgtctcca 748
>emb|CR726028.2|CNS0GN5E Tetraodon nigroviridis full-length cDNA Length = 1359 Score = 42.1 bits (21), Expect = 7.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 718 caccttcatcggcttcatcgccgtctcca 746 ||||||||||| || |||||||||||||| Sbjct: 726 caccttcatcgtctacatcgccgtctcca 754
>gb|AC084884.2| Oryza sativa chromosome 10 clone OSJNBa0031A07, complete sequence Length = 134553 Score = 42.1 bits (21), Expect = 7.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1698 ccaacgccaccgctgccgccaccgccaac 1726 |||||||| |||| ||||||||||||||| Sbjct: 62844 ccaacgccgccgccgccgccaccgccaac 62872
>gb|AF357925.1|AF357925 Ginglymostoma cirratum MHC class I antigen (UAA05) mRNA, partial cds Length = 1680 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 681 acaaccccagcgatgaccgca 701 ||||||||||||||||||||| Sbjct: 867 acaaccccagcgatgaccgca 847
>gb|AY052199.1| Arabidopsis thaliana At1g06800/F4H5_10 mRNA, complete cds Length = 1650 Score = 42.1 bits (21), Expect = 7.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 773 cgccgggacatcgccgtcgcctggagaggcaccgtcacaaagctcgagtggat 825 ||||| ||||| ||| ||||||||||||| || ||||| |||||||||||| Sbjct: 872 cgccgcgacattgccatcgcctggagagggactgtcacgcggctcgagtggat 924
>gb|AC155830.7| Mus musculus 10 BAC RP24-495I3 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 189267 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1244 gactccgtgcccaaggtgccc 1264 ||||||||||||||||||||| Sbjct: 3730 gactccgtgcccaaggtgccc 3710
>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16 Length = 348706 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1214 gtcaaggcgctgcgcatcctc 1234 ||||||||||||||||||||| Sbjct: 48199 gtcaaggcgctgcgcatcctc 48219
>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14 Length = 348997 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1214 gtcaaggcgctgcgcatcctc 1234 ||||||||||||||||||||| Sbjct: 304883 gtcaaggcgctgcgcatcctc 304903
>emb|BX572600.1| Rhodopseudomonas palustris CGA009 complete genome; segment 8/16 Length = 349640 Score = 42.1 bits (21), Expect = 7.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1015 gcagggcgaggaggtgagcgtcaccgtcaccgg 1047 ||||||||||||||||| ||||| |||||||| Sbjct: 62670 gcagggcgaggaggtgatcgtcatagtcaccgg 62702
>dbj|AP002901.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456F08 Length = 156850 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 628 ctacctctacgccacctcccacgcc 652 ||||||||||||||||||| ||||| Sbjct: 91910 ctacctctacgccacctccgacgcc 91886
>dbj|AP003313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0035F12 Length = 153439 Score = 42.1 bits (21), Expect = 7.6 Identities = 66/81 (81%) Strand = Plus / Plus Query: 1019 ggcgaggaggtgagcgtcaccgtcaccggccacagcctcggcgccgcgctcgccgtgctc 1078 |||||||| || |||||||| || ||||||||||| | ||| |||||| || | ||| Sbjct: 46950 ggcgaggacgtcagcgtcacgctcgccggccacagcatgggcagcgcgctggcgctcctc 47009 Query: 1079 tgcgcctacgacatcgccgag 1099 | |||||||||| |||||||| Sbjct: 47010 tccgcctacgacctcgccgag 47030
>emb|AL646096.8| Mouse DNA sequence from clone RP23-176J13 on chromosome 11 Contains the 5' end of the Scpep1 gene for serine carboxypeptidase 1, two transcription elongation factor B (SIII) polypeptide 2 (Tceb2) pseudogenes, four novel genes (incl. A930013B10Rik), the Coil gene for coilin, the Trim25 gene for tripartite motif protein 25 and the Dgke gene for diacylglycerol kinase epsilon, complete sequence Length = 171512 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1696 cgccaacgccaccgctgccgccacc 1720 ||||| ||||||||||||||||||| Sbjct: 6399 cgccaccgccaccgctgccgccacc 6423
>emb|AL670757.5| Mouse DNA sequence from clone RP23-209G11 on chromosome 13 Contains a triosephosphate isomerase (Tpi) pseudogene, complete sequence Length = 92103 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1244 gactccgtgcccaaggtgccc 1264 ||||||||||||||||||||| Sbjct: 9910 gactccgtgcccaaggtgccc 9930
>gb|AC012373.14|AC012373 Drosophila melanogaster, chromosome X, region 17B-17C, BAC clone BACR17H16, complete sequence Length = 182080 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1693 taccgccaacgccaccgctgccgcc 1717 |||||||||||||||||| |||||| Sbjct: 5021 taccgccaacgccaccgccgccgcc 5045
>gb|AC012098.9|AC012098 Drosophila melanogaster, chromosome X, region 17A-17B, BAC clone BACR03K10, complete sequence Length = 188489 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1693 taccgccaacgccaccgctgccgcc 1717 |||||||||||||||||| |||||| Sbjct: 145433 taccgccaacgccaccgccgccgcc 145457
>gb|DQ010326.1| Heliothis armigera cypovirus 14 segment 7, complete sequence Length = 1391 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 gtacaaccatccatccgtcga 97 ||||||||||||||||||||| Sbjct: 362 gtacaaccatccatccgtcga 342
>gb|AC008313.3|AC008313 Drosophila melanogaster, chromosome 3R, region 84D-84E, BAC clone BACR11D12, complete sequence Length = 189596 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 635 tacgccacctcccacgcccgc 655 ||||||||||||||||||||| Sbjct: 63988 tacgccacctcccacgcccgc 64008
>gb|AC159380.8| Mus musculus 10 BAC RP24-460M18 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 196877 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1244 gactccgtgcccaaggtgccc 1264 ||||||||||||||||||||| Sbjct: 164022 gactccgtgcccaaggtgccc 164002
>dbj|AP004753.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0508B05 Length = 166165 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1704 ccaccgctgccgccaccgcca 1724 ||||||||||||||||||||| Sbjct: 133283 ccaccgctgccgccaccgcca 133303
>gb|AC007253.2| Homo sapiens BAC clone RP11-454P5 from 2, complete sequence Length = 225699 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1927 tgtatgccaataaaaagtaac 1947 ||||||||||||||||||||| Sbjct: 203820 tgtatgccaataaaaagtaac 203800
>dbj|AP002485.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:P0491E01 Length = 136150 Score = 42.1 bits (21), Expect = 7.6 Identities = 39/45 (86%) Strand = Plus / Plus Query: 1017 agggcgaggaggtgagcgtcaccgtcaccggccacagcctcggcg 1061 ||||||||||| | ||| |||| ||| ||||||||||||||||| Sbjct: 131661 agggcgaggagctcagcatcacggtcgtcggccacagcctcggcg 131705
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 995 ctggtggagcgctacaccggg 1015 ||||||||||||||||||||| Sbjct: 1152099 ctggtggagcgctacaccggg 1152079
>dbj|AP003792.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1159_D09 Length = 147770 Score = 42.1 bits (21), Expect = 7.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1035 tcaccgtcaccggccacagcctcggcgcc 1063 ||||||||| |||||||||||| |||||| Sbjct: 108279 tcaccgtcatcggccacagcctgggcgcc 108307
>dbj|AP005609.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0014M17 Length = 156778 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1704 ccaccgctgccgccaccgcca 1724 ||||||||||||||||||||| Sbjct: 59803 ccaccgctgccgccaccgcca 59823
>dbj|AP005287.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_A11 Length = 132352 Score = 42.1 bits (21), Expect = 7.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1044 ccggccacagcctcggcgccgcgctcgcc 1072 |||| ||||||||||||| |||||||||| Sbjct: 96263 ccgggcacagcctcggcggcgcgctcgcc 96235
>gb|BT002718.1| Arabidopsis thaliana At1g06800/F4H5_10 gene, complete cds Length = 1335 Score = 42.1 bits (21), Expect = 7.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 773 cgccgggacatcgccgtcgcctggagaggcaccgtcacaaagctcgagtggat 825 ||||| ||||| ||| ||||||||||||| || ||||| |||||||||||| Sbjct: 625 cgccgcgacattgccatcgcctggagagggactgtcacgcggctcgagtggat 677
>dbj|AK106154.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-A03, full insert sequence Length = 1910 Score = 42.1 bits (21), Expect = 7.6 Identities = 39/45 (86%) Strand = Plus / Plus Query: 1017 agggcgaggaggtgagcgtcaccgtcaccggccacagcctcggcg 1061 ||||||||||| | ||| |||| ||| ||||||||||||||||| Sbjct: 1171 agggcgaggagctcagcatcacggtcgtcggccacagcctcggcg 1215
>dbj|AK106129.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-F09, full insert sequence Length = 1810 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 628 ctacctctacgccacctcccacgcc 652 ||||||||||||||||||| ||||| Sbjct: 387 ctacctctacgccacctccgacgcc 411
>dbj|AK104793.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-F10, full insert sequence Length = 1910 Score = 42.1 bits (21), Expect = 7.6 Identities = 39/45 (86%) Strand = Plus / Plus Query: 1017 agggcgaggaggtgagcgtcaccgtcaccggccacagcctcggcg 1061 ||||||||||| | ||| |||| ||| ||||||||||||||||| Sbjct: 1171 agggcgaggagctcagcatcacggtcgtcggccacagcctcggcg 1215
>dbj|AK104373.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-F02, full insert sequence Length = 1810 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 628 ctacctctacgccacctcccacgcc 652 ||||||||||||||||||| ||||| Sbjct: 387 ctacctctacgccacctccgacgcc 411
>dbj|AK103250.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033123M10, full insert sequence Length = 1112 Score = 42.1 bits (21), Expect = 7.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1044 ccggccacagcctcggcgccgcgctcgcc 1072 |||| ||||||||||||| |||||||||| Sbjct: 330 ccgggcacagcctcggcggcgcgctcgcc 358
>dbj|AK098952.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055J12, full insert sequence Length = 1805 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 628 ctacctctacgccacctcccacgcc 652 ||||||||||||||||||| ||||| Sbjct: 386 ctacctctacgccacctccgacgcc 410
>dbj|AK098925.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002P22, full insert sequence Length = 1934 Score = 42.1 bits (21), Expect = 7.6 Identities = 39/45 (86%) Strand = Plus / Plus Query: 1017 agggcgaggaggtgagcgtcaccgtcaccggccacagcctcggcg 1061 ||||||||||| | ||| |||| ||| ||||||||||||||||| Sbjct: 1172 agggcgaggagctcagcatcacggtcgtcggccacagcctcggcg 1216
>dbj|AK069577.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022J10, full insert sequence Length = 1921 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 628 ctacctctacgccacctcccacgcc 652 ||||||||||||||||||| ||||| Sbjct: 387 ctacctctacgccacctccgacgcc 411
>dbj|AK064950.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000P22, full insert sequence Length = 1964 Score = 42.1 bits (21), Expect = 7.6 Identities = 39/45 (86%) Strand = Plus / Plus Query: 1017 agggcgaggaggtgagcgtcaccgtcaccggccacagcctcggcg 1061 ||||||||||| | ||| |||| ||| ||||||||||||||||| Sbjct: 1171 agggcgaggagctcagcatcacggtcgtcggccacagcctcggcg 1215
>dbj|AK064404.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-H07, full insert sequence Length = 1781 Score = 42.1 bits (21), Expect = 7.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1044 ccggccacagcctcggcgccgcgctcgcc 1072 |||| ||||||||||||| |||||||||| Sbjct: 997 ccgggcacagcctcggcggcgcgctcgcc 1025
>gb|AF220063.1|AF220063 Ginglymostoma cirratum MHC class I protein (Gici-UAA01) mRNA, complete cds Length = 1828 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 681 acaaccccagcgatgaccgca 701 ||||||||||||||||||||| Sbjct: 1012 acaaccccagcgatgaccgca 992
>gb|AC011001.2|AC011001 Arabidopsis thaliana chromosome I BAC F4H5 genomic sequence, complete sequence Length = 91608 Score = 42.1 bits (21), Expect = 7.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 773 cgccgggacatcgccgtcgcctggagaggcaccgtcacaaagctcgagtggat 825 ||||| ||||| ||| ||||||||||||| || ||||| |||||||||||| Sbjct: 44277 cgccgcgacattgccatcgcctggagagggactgtcacgcggctcgagtggat 44329
>gb|AC154594.2| Mus musculus BAC clone RP23-350L7 from chromosome 14, complete sequence Length = 195046 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1244 gactccgtgcccaaggtgccc 1264 ||||||||||||||||||||| Sbjct: 104850 gactccgtgcccaaggtgccc 104870
>ref|XM_307780.2| Anopheles gambiae str. PEST ENSANGP00000012927 (ENSANGG00000010438), partial mRNA Length = 14007 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 982 cgaggtgcgcaagctggtggagcgc 1006 ||||||||||||||||||| ||||| Sbjct: 8307 cgaggtgcgcaagctggtgaagcgc 8331
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 739 cgtctccaccgacgaggagacggcg 763 |||||| |||||||||||||||||| Sbjct: 1618891 cgtctcgaccgacgaggagacggcg 1618915
>gb|AC124474.4| Mus musculus BAC clone RP24-88C10 from 1, complete sequence Length = 225413 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1244 gactccgtgcccaaggtgccc 1264 ||||||||||||||||||||| Sbjct: 126001 gactccgtgcccaaggtgccc 125981
>gb|AC132613.4| Mus musculus BAC clone RP23-285C21 from 6, complete sequence Length = 221317 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1244 gactccgtgcccaaggtgccc 1264 ||||||||||||||||||||| Sbjct: 138812 gactccgtgcccaaggtgccc 138792
>dbj|AP001111.1| Oryza sativa genomic DNA, chromosome 5, clone:P0699E04 Length = 175439 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 gatcgacccatccatccatca 21 ||||||||||||||||||||| Sbjct: 8846 gatcgacccatccatccatca 8826
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 995 ctggtggagcgctacaccggg 1015 ||||||||||||||||||||| Sbjct: 826051 ctggtggagcgctacaccggg 826031
>emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2 Length = 339972 Score = 42.1 bits (21), Expect = 7.6 Identities = 39/45 (86%) Strand = Plus / Plus Query: 1017 agggcgaggaggtgagcgtcaccgtcaccggccacagcctcggcg 1061 ||||||||||| | ||| |||| ||| ||||||||||||||||| Sbjct: 121326 agggcgaggagctcagcatcacggtcgtcggccacagcctcggcg 121370
>ref|XM_773600.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_39_17742_19325) partial mRNA Length = 1584 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 983 gaggtgcgcaagctggtggag 1003 ||||||||||||||||||||| Sbjct: 706 gaggtgcgcaagctggtggag 726
>gb|AC093316.28| Mus musculus strain C57BL/6J chromosome 10 clone rp23-202i7, complete sequence Length = 226567 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1244 gactccgtgcccaaggtgccc 1264 ||||||||||||||||||||| Sbjct: 221260 gactccgtgcccaaggtgccc 221280
>emb|AL670256.6| Mouse DNA sequence from clone RP23-300H22 on chromosome 4, complete sequence Length = 237318 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1244 gactccgtgcccaaggtgccc 1264 ||||||||||||||||||||| Sbjct: 197509 gactccgtgcccaaggtgccc 197529
>emb|AL593855.9| Mouse DNA sequence from clone RP23-329H3 on chromosome 1, complete sequence Length = 177918 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1244 gactccgtgcccaaggtgccc 1264 ||||||||||||||||||||| Sbjct: 3427 gactccgtgcccaaggtgccc 3407
>emb|AL844531.6| Mouse DNA sequence from clone RP23-211J18 on chromosome 2, complete sequence Length = 181194 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1241 cacgactccgtgcccaaggtg 1261 ||||||||||||||||||||| Sbjct: 141241 cacgactccgtgcccaaggtg 141221
>emb|AL772335.5| Mouse DNA sequence from clone RP23-415F19 on chromosome 4, complete sequence Length = 201702 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1244 gactccgtgcccaaggtgccc 1264 ||||||||||||||||||||| Sbjct: 19168 gactccgtgcccaaggtgccc 19188
>gb|U52907.1|TAU52907 Thermus aquaticus thermophilus isopropylmalate synthase (LEU1) mRNA, partial cds Length = 1258 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 995 ctggtggagcgctacaccggg 1015 ||||||||||||||||||||| Sbjct: 253 ctggtggagcgctacaccggg 273
>emb|AL669900.15| Mouse DNA sequence from clone RP23-254J17 on chromosome X, complete sequence Length = 207870 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1244 gactccgtgcccaaggtgccc 1264 ||||||||||||||||||||| Sbjct: 49835 gactccgtgcccaaggtgccc 49855
>dbj|D83970.1| Vigna unguiculata mRNA for CPRD8 protein, complete cds Length = 1515 Score = 42.1 bits (21), Expect = 7.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1694 accgccaacgccaccgctgccgccaccgc 1722 ||||||| ||||||||| ||||||||||| Sbjct: 22 accgccaccgccaccgccgccgccaccgc 50 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 271,334,344 Number of extensions: 14786866 Number of successful extensions: 96907 Number of sequences better than 10.0: 172 Number of HSP's gapped: 96898 Number of HSP's successfully gapped: 217 Length of query: 1986 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1963 Effective length of database: 18,503,978,556 Effective search space: 36323309905428 Effective search space used: 36323309905428 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
