| Clone Name | FLbaf24g02 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT828646.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA221N13, full insert sequence Length = 1213 Score = 105 bits (53), Expect = 5e-19 Identities = 86/97 (88%) Strand = Plus / Plus Query: 954 aggaggcagcagatggaggtggagaggtccctgcaccagatctggttcttcctctttgtg 1013 ||||| || |||||||| || |||||||| ||||| |||||||||||||||||||| || Sbjct: 940 aggagacatcagatggaagttgagaggtcactgcatcagatctggttcttcctcttcgtt 999 Query: 1014 tttgtggtgttgtgtctgctcttgttctgaagaaaga 1050 ||||||||| |||| ||||||||||||||||| |||| Sbjct: 1000 tttgtggtgctgtgcctgctcttgttctgaagcaaga 1036 Score = 99.6 bits (50), Expect = 3e-17 Identities = 101/118 (85%) Strand = Plus / Plus Query: 786 taccctccttcaccaatggggcgtggcttgatccattccacggctggaggggtgctagga 845 ||||| || |||||||| ||||||||||||||||| || |||||||| || ||||| || Sbjct: 775 tacccgccatcaccaattgggcgtggcttgatccactcgacggctggtggtgtgcttggg 834 Query: 846 gggatggcggaggcggtgcttccgtgggcgtttcgtgggcaggtgccgccgagcatgt 903 |||||||| | ||||||||| || ||||| || ||||| |||||||| |||||||||| Sbjct: 835 gggatggcagtggcggtgctaccatgggcattccgtggccaggtgccaccgagcatgt 892 Score = 89.7 bits (45), Expect = 3e-14 Identities = 81/93 (87%) Strand = Plus / Plus Query: 380 ctttgactgcaacatctgcctcgacttcgctgcagatccagtcgttaccctttgtggcca 439 ||||||||||||||| ||||| || || || ||||| || || ||||| |||||||| || Sbjct: 375 ctttgactgcaacatttgccttgattttgcagcagagccggtggttactctttgtggtca 434 Query: 440 tctgtactgctggccttgcatctacgagtggct 472 ||| |||||||||||||||||||| |||||||| Sbjct: 435 tctctactgctggccttgcatctatgagtggct 467 Score = 44.1 bits (22), Expect = 1.5 Identities = 37/42 (88%) Strand = Plus / Plus Query: 680 catcgatgacctgcaccaccagaacatggagcccagccctcc 721 ||||||||| | |||||| |||||||||| ||||||||||| Sbjct: 675 catcgatgatcggcaccatgagaacatggaacccagccctcc 716
>emb|CT828645.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA107F21, full insert sequence Length = 1219 Score = 105 bits (53), Expect = 5e-19 Identities = 86/97 (88%) Strand = Plus / Plus Query: 954 aggaggcagcagatggaggtggagaggtccctgcaccagatctggttcttcctctttgtg 1013 ||||| || |||||||| || |||||||| ||||| |||||||||||||||||||| || Sbjct: 940 aggagacatcagatggaagttgagaggtcactgcatcagatctggttcttcctcttcgtt 999 Query: 1014 tttgtggtgttgtgtctgctcttgttctgaagaaaga 1050 ||||||||| |||| ||||||||||||||||| |||| Sbjct: 1000 tttgtggtgctgtgcctgctcttgttctgaagcaaga 1036 Score = 99.6 bits (50), Expect = 3e-17 Identities = 101/118 (85%) Strand = Plus / Plus Query: 786 taccctccttcaccaatggggcgtggcttgatccattccacggctggaggggtgctagga 845 ||||| || |||||||| ||||||||||||||||| || |||||||| || ||||| || Sbjct: 775 tacccgccatcaccaattgggcgtggcttgatccactcgacggctggtggtgtgcttggg 834 Query: 846 gggatggcggaggcggtgcttccgtgggcgtttcgtgggcaggtgccgccgagcatgt 903 |||||||| | ||||||||| || ||||| || ||||| |||||||| |||||||||| Sbjct: 835 gggatggcagtggcggtgctaccatgggcattccgtggccaggtgccaccgagcatgt 892 Score = 89.7 bits (45), Expect = 3e-14 Identities = 81/93 (87%) Strand = Plus / Plus Query: 380 ctttgactgcaacatctgcctcgacttcgctgcagatccagtcgttaccctttgtggcca 439 ||||||||||||||| ||||| || || || ||||| || || ||||| |||||||| || Sbjct: 375 ctttgactgcaacatttgccttgattttgcagcagagccggtggttactctttgtggtca 434 Query: 440 tctgtactgctggccttgcatctacgagtggct 472 ||| |||||||||||||||||||| |||||||| Sbjct: 435 tctctactgctggccttgcatctatgagtggct 467 Score = 44.1 bits (22), Expect = 1.5 Identities = 37/42 (88%) Strand = Plus / Plus Query: 680 catcgatgacctgcaccaccagaacatggagcccagccctcc 721 ||||||||| | |||||| |||||||||| ||||||||||| Sbjct: 675 catcgatgatcggcaccatgagaacatggaacccagccctcc 716
>emb|CT827956.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0155K17, complete sequence Length = 81888 Score = 105 bits (53), Expect = 5e-19 Identities = 86/97 (88%) Strand = Plus / Minus Query: 954 aggaggcagcagatggaggtggagaggtccctgcaccagatctggttcttcctctttgtg 1013 ||||| || |||||||| || |||||||| ||||| |||||||||||||||||||| || Sbjct: 71294 aggagacatcagatggaagttgagaggtcactgcatcagatctggttcttcctcttcgtt 71235 Query: 1014 tttgtggtgttgtgtctgctcttgttctgaagaaaga 1050 ||||||||| |||| ||||||||||||||||| |||| Sbjct: 71234 tttgtggtgctgtgcctgctcttgttctgaagcaaga 71198 Score = 99.6 bits (50), Expect = 3e-17 Identities = 101/118 (85%) Strand = Plus / Minus Query: 786 taccctccttcaccaatggggcgtggcttgatccattccacggctggaggggtgctagga 845 ||||| || |||||||| ||||||||||||||||| || |||||||| || ||||| || Sbjct: 71459 tacccgccatcaccaattgggcgtggcttgatccactcgacggctggtggtgtgcttggg 71400 Query: 846 gggatggcggaggcggtgcttccgtgggcgtttcgtgggcaggtgccgccgagcatgt 903 |||||||| | ||||||||| || ||||| || ||||| |||||||| |||||||||| Sbjct: 71399 gggatggcagtggcggtgctaccatgggcattccgtggccaggtgccaccgagcatgt 71342 Score = 89.7 bits (45), Expect = 3e-14 Identities = 81/93 (87%) Strand = Plus / Minus Query: 380 ctttgactgcaacatctgcctcgacttcgctgcagatccagtcgttaccctttgtggcca 439 ||||||||||||||| ||||| || || || ||||| || || ||||| |||||||| || Sbjct: 71859 ctttgactgcaacatttgccttgattttgcagcagagccggtggttactctttgtggtca 71800 Query: 440 tctgtactgctggccttgcatctacgagtggct 472 ||| |||||||||||||||||||| |||||||| Sbjct: 71799 tctctactgctggccttgcatctatgagtggct 71767 Score = 44.1 bits (22), Expect = 1.5 Identities = 37/42 (88%) Strand = Plus / Minus Query: 680 catcgatgacctgcaccaccagaacatggagcccagccctcc 721 ||||||||| | |||||| |||||||||| ||||||||||| Sbjct: 71559 catcgatgatcggcaccatgagaacatggaacccagccctcc 71518
>ref|NM_001059925.1| Oryza sativa (japonica cultivar-group) Os04g0530500 (Os04g0530500) mRNA, complete cds Length = 1219 Score = 105 bits (53), Expect = 5e-19 Identities = 86/97 (88%) Strand = Plus / Plus Query: 954 aggaggcagcagatggaggtggagaggtccctgcaccagatctggttcttcctctttgtg 1013 ||||| || |||||||| || |||||||| ||||| |||||||||||||||||||| || Sbjct: 940 aggagacatcagatggaagttgagaggtcactgcatcagatctggttcttcctcttcgtt 999 Query: 1014 tttgtggtgttgtgtctgctcttgttctgaagaaaga 1050 ||||||||| |||| ||||||||||||||||| |||| Sbjct: 1000 tttgtggtgctgtgcctgctcttgttctgaagcaaga 1036 Score = 99.6 bits (50), Expect = 3e-17 Identities = 101/118 (85%) Strand = Plus / Plus Query: 786 taccctccttcaccaatggggcgtggcttgatccattccacggctggaggggtgctagga 845 ||||| || |||||||| ||||||||||||||||| || |||||||| || ||||| || Sbjct: 775 tacccgccatcaccaattgggcgtggcttgatccactcgacggctggtggtgtgcttggg 834 Query: 846 gggatggcggaggcggtgcttccgtgggcgtttcgtgggcaggtgccgccgagcatgt 903 |||||||| | ||||||||| || ||||| || ||||| |||||||| |||||||||| Sbjct: 835 gggatggcagtggcggtgctaccatgggcattccgtggccaggtgccaccgagcatgt 892 Score = 89.7 bits (45), Expect = 3e-14 Identities = 81/93 (87%) Strand = Plus / Plus Query: 380 ctttgactgcaacatctgcctcgacttcgctgcagatccagtcgttaccctttgtggcca 439 ||||||||||||||| ||||| || || || ||||| || || ||||| |||||||| || Sbjct: 375 ctttgactgcaacatttgccttgattttgcagcagagccggtggttactctttgtggtca 434 Query: 440 tctgtactgctggccttgcatctacgagtggct 472 ||| |||||||||||||||||||| |||||||| Sbjct: 435 tctctactgctggccttgcatctatgagtggct 467 Score = 44.1 bits (22), Expect = 1.5 Identities = 37/42 (88%) Strand = Plus / Plus Query: 680 catcgatgacctgcaccaccagaacatggagcccagccctcc 721 ||||||||| | |||||| |||||||||| ||||||||||| Sbjct: 675 catcgatgatcggcaccatgagaacatggaacccagccctcc 716
>emb|AL442109.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: B1011H02, complete sequence Length = 40167 Score = 105 bits (53), Expect = 5e-19 Identities = 86/97 (88%) Strand = Plus / Minus Query: 954 aggaggcagcagatggaggtggagaggtccctgcaccagatctggttcttcctctttgtg 1013 ||||| || |||||||| || |||||||| ||||| |||||||||||||||||||| || Sbjct: 5183 aggagacatcagatggaagttgagaggtcactgcatcagatctggttcttcctcttcgtt 5124 Query: 1014 tttgtggtgttgtgtctgctcttgttctgaagaaaga 1050 ||||||||| |||| ||||||||||||||||| |||| Sbjct: 5123 tttgtggtgctgtgcctgctcttgttctgaagcaaga 5087 Score = 99.6 bits (50), Expect = 3e-17 Identities = 101/118 (85%) Strand = Plus / Minus Query: 786 taccctccttcaccaatggggcgtggcttgatccattccacggctggaggggtgctagga 845 ||||| || |||||||| ||||||||||||||||| || |||||||| || ||||| || Sbjct: 5348 tacccgccatcaccaattgggcgtggcttgatccactcgacggctggtggtgtgcttggg 5289 Query: 846 gggatggcggaggcggtgcttccgtgggcgtttcgtgggcaggtgccgccgagcatgt 903 |||||||| | ||||||||| || ||||| || ||||| |||||||| |||||||||| Sbjct: 5288 gggatggcagtggcggtgctaccatgggcattccgtggccaggtgccaccgagcatgt 5231 Score = 89.7 bits (45), Expect = 3e-14 Identities = 81/93 (87%) Strand = Plus / Minus Query: 380 ctttgactgcaacatctgcctcgacttcgctgcagatccagtcgttaccctttgtggcca 439 ||||||||||||||| ||||| || || || ||||| || || ||||| |||||||| || Sbjct: 5748 ctttgactgcaacatttgccttgattttgcagcagagccggtggttactctttgtggtca 5689 Query: 440 tctgtactgctggccttgcatctacgagtggct 472 ||| |||||||||||||||||||| |||||||| Sbjct: 5688 tctctactgctggccttgcatctatgagtggct 5656 Score = 44.1 bits (22), Expect = 1.5 Identities = 37/42 (88%) Strand = Plus / Minus Query: 680 catcgatgacctgcaccaccagaacatggagcccagccctcc 721 ||||||||| | |||||| |||||||||| ||||||||||| Sbjct: 5448 catcgatgatcggcaccatgagaacatggaacccagccctcc 5407
>dbj|AB236018.1| Oryza environmental sample genomic DNA, clone: 1B4-2 Length = 363 Score = 105 bits (53), Expect = 5e-19 Identities = 86/97 (88%) Strand = Plus / Plus Query: 954 aggaggcagcagatggaggtggagaggtccctgcaccagatctggttcttcctctttgtg 1013 ||||| || |||||||| || |||||||| ||||| |||||||||||||||||||| || Sbjct: 221 aggagacatcagatggaagttgagaggtcactgcatcagatctggttcttcctcttcgtt 280 Query: 1014 tttgtggtgttgtgtctgctcttgttctgaagaaaga 1050 ||||||||| |||| ||||||||||||||||| |||| Sbjct: 281 tttgtggtgctgtgcctgctcttgttctgaagcaaga 317 Score = 99.6 bits (50), Expect = 3e-17 Identities = 101/118 (85%) Strand = Plus / Plus Query: 786 taccctccttcaccaatggggcgtggcttgatccattccacggctggaggggtgctagga 845 ||||| || |||||||| ||||||||||||||||| || |||||||| || ||||| || Sbjct: 56 tacccgccatcaccaattgggcgtggcttgatccactcgacggctggtggtgtgcttggg 115 Query: 846 gggatggcggaggcggtgcttccgtgggcgtttcgtgggcaggtgccgccgagcatgt 903 |||||||| | ||||||||| || ||||| || ||||| |||||||| |||||||||| Sbjct: 116 gggatggcagtggcggtgctaccatgggcattccgtggccaggtgccaccgagcatgt 173
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 105 bits (53), Expect = 5e-19 Identities = 86/97 (88%) Strand = Plus / Minus Query: 954 aggaggcagcagatggaggtggagaggtccctgcaccagatctggttcttcctctttgtg 1013 ||||| || |||||||| || |||||||| ||||| |||||||||||||||||||| || Sbjct: 26506363 aggagacatcagatggaagttgagaggtcactgcatcagatctggttcttcctcttcgtt 26506304 Query: 1014 tttgtggtgttgtgtctgctcttgttctgaagaaaga 1050 ||||||||| |||| ||||||||||||||||| |||| Sbjct: 26506303 tttgtggtgctgtgcctgctcttgttctgaagcaaga 26506267 Score = 99.6 bits (50), Expect = 3e-17 Identities = 101/118 (85%) Strand = Plus / Minus Query: 786 taccctccttcaccaatggggcgtggcttgatccattccacggctggaggggtgctagga 845 ||||| || |||||||| ||||||||||||||||| || |||||||| || ||||| || Sbjct: 26506528 tacccgccatcaccaattgggcgtggcttgatccactcgacggctggtggtgtgcttggg 26506469 Query: 846 gggatggcggaggcggtgcttccgtgggcgtttcgtgggcaggtgccgccgagcatgt 903 |||||||| | ||||||||| || ||||| || ||||| |||||||| |||||||||| Sbjct: 26506468 gggatggcagtggcggtgctaccatgggcattccgtggccaggtgccaccgagcatgt 26506411 Score = 89.7 bits (45), Expect = 3e-14 Identities = 81/93 (87%) Strand = Plus / Minus Query: 380 ctttgactgcaacatctgcctcgacttcgctgcagatccagtcgttaccctttgtggcca 439 ||||||||||||||| ||||| || || || ||||| || || ||||| |||||||| || Sbjct: 26506928 ctttgactgcaacatttgccttgattttgcagcagagccggtggttactctttgtggtca 26506869 Query: 440 tctgtactgctggccttgcatctacgagtggct 472 ||| |||||||||||||||||||| |||||||| Sbjct: 26506868 tctctactgctggccttgcatctatgagtggct 26506836 Score = 44.1 bits (22), Expect = 1.5 Identities = 37/42 (88%) Strand = Plus / Minus Query: 680 catcgatgacctgcaccaccagaacatggagcccagccctcc 721 ||||||||| | |||||| |||||||||| ||||||||||| Sbjct: 26506628 catcgatgatcggcaccatgagaacatggaacccagccctcc 26506587
>emb|AL662984.3|OSJN00183 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081C01, complete sequence Length = 140454 Score = 105 bits (53), Expect = 5e-19 Identities = 86/97 (88%) Strand = Plus / Minus Query: 954 aggaggcagcagatggaggtggagaggtccctgcaccagatctggttcttcctctttgtg 1013 ||||| || |||||||| || |||||||| ||||| |||||||||||||||||||| || Sbjct: 43250 aggagacatcagatggaagttgagaggtcactgcatcagatctggttcttcctcttcgtt 43191 Query: 1014 tttgtggtgttgtgtctgctcttgttctgaagaaaga 1050 ||||||||| |||| ||||||||||||||||| |||| Sbjct: 43190 tttgtggtgctgtgcctgctcttgttctgaagcaaga 43154 Score = 99.6 bits (50), Expect = 3e-17 Identities = 101/118 (85%) Strand = Plus / Minus Query: 786 taccctccttcaccaatggggcgtggcttgatccattccacggctggaggggtgctagga 845 ||||| || |||||||| ||||||||||||||||| || |||||||| || ||||| || Sbjct: 43415 tacccgccatcaccaattgggcgtggcttgatccactcgacggctggtggtgtgcttggg 43356 Query: 846 gggatggcggaggcggtgcttccgtgggcgtttcgtgggcaggtgccgccgagcatgt 903 |||||||| | ||||||||| || ||||| || ||||| |||||||| |||||||||| Sbjct: 43355 gggatggcagtggcggtgctaccatgggcattccgtggccaggtgccaccgagcatgt 43298 Score = 89.7 bits (45), Expect = 3e-14 Identities = 81/93 (87%) Strand = Plus / Minus Query: 380 ctttgactgcaacatctgcctcgacttcgctgcagatccagtcgttaccctttgtggcca 439 ||||||||||||||| ||||| || || || ||||| || || ||||| |||||||| || Sbjct: 43815 ctttgactgcaacatttgccttgattttgcagcagagccggtggttactctttgtggtca 43756 Query: 440 tctgtactgctggccttgcatctacgagtggct 472 ||| |||||||||||||||||||| |||||||| Sbjct: 43755 tctctactgctggccttgcatctatgagtggct 43723 Score = 44.1 bits (22), Expect = 1.5 Identities = 37/42 (88%) Strand = Plus / Minus Query: 680 catcgatgacctgcaccaccagaacatggagcccagccctcc 721 ||||||||| | |||||| |||||||||| ||||||||||| Sbjct: 43515 catcgatgatcggcaccatgagaacatggaacccagccctcc 43474
>dbj|AK104359.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-B09, full insert sequence Length = 1153 Score = 105 bits (53), Expect = 5e-19 Identities = 86/97 (88%) Strand = Plus / Plus Query: 954 aggaggcagcagatggaggtggagaggtccctgcaccagatctggttcttcctctttgtg 1013 ||||| || |||||||| || |||||||| ||||| |||||||||||||||||||| || Sbjct: 880 aggagacatcagatggaagttgagaggtcactgcatcagatctggttcttcctcttcgtt 939 Query: 1014 tttgtggtgttgtgtctgctcttgttctgaagaaaga 1050 ||||||||| |||| ||||||||||||||||| |||| Sbjct: 940 tttgtggtgctgtgcctgctcttgttctgaagcaaga 976 Score = 99.6 bits (50), Expect = 3e-17 Identities = 101/118 (85%) Strand = Plus / Plus Query: 786 taccctccttcaccaatggggcgtggcttgatccattccacggctggaggggtgctagga 845 ||||| || |||||||| ||||||||||||||||| || |||||||| || ||||| || Sbjct: 715 tacccgccatcaccaattgggcgtggcttgatccactcgacggctggtggtgtgcttggg 774 Query: 846 gggatggcggaggcggtgcttccgtgggcgtttcgtgggcaggtgccgccgagcatgt 903 |||||||| | ||||||||| || ||||| || ||||| |||||||| |||||||||| Sbjct: 775 gggatggcagtggcggtgctaccatgggcattccgtggccaggtgccaccgagcatgt 832 Score = 89.7 bits (45), Expect = 3e-14 Identities = 81/93 (87%) Strand = Plus / Plus Query: 380 ctttgactgcaacatctgcctcgacttcgctgcagatccagtcgttaccctttgtggcca 439 ||||||||||||||| ||||| || || || ||||| || || ||||| |||||||| || Sbjct: 315 ctttgactgcaacatttgccttgattttgcagcagagccggtggttactctttgtggtca 374 Query: 440 tctgtactgctggccttgcatctacgagtggct 472 ||| |||||||||||||||||||| |||||||| Sbjct: 375 tctctactgctggccttgcatctatgagtggct 407 Score = 44.1 bits (22), Expect = 1.5 Identities = 37/42 (88%) Strand = Plus / Plus Query: 680 catcgatgacctgcaccaccagaacatggagcccagccctcc 721 ||||||||| | |||||| |||||||||| ||||||||||| Sbjct: 615 catcgatgatcggcaccatgagaacatggaacccagccctcc 656
>dbj|AK070732.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063I18, full insert sequence Length = 1220 Score = 105 bits (53), Expect = 5e-19 Identities = 86/97 (88%) Strand = Plus / Plus Query: 954 aggaggcagcagatggaggtggagaggtccctgcaccagatctggttcttcctctttgtg 1013 ||||| || |||||||| || |||||||| ||||| |||||||||||||||||||| || Sbjct: 941 aggagacatcagatggaagttgagaggtcactgcatcagatctggttcttcctcttcgtt 1000 Query: 1014 tttgtggtgttgtgtctgctcttgttctgaagaaaga 1050 ||||||||| |||| ||||||||||||||||| |||| Sbjct: 1001 tttgtggtgctgtgcctgctcttgttctgaagcaaga 1037 Score = 99.6 bits (50), Expect = 3e-17 Identities = 101/118 (85%) Strand = Plus / Plus Query: 786 taccctccttcaccaatggggcgtggcttgatccattccacggctggaggggtgctagga 845 ||||| || |||||||| ||||||||||||||||| || |||||||| || ||||| || Sbjct: 776 tacccgccatcaccaattgggcgtggcttgatccactcgacggctggtggtgtgcttggg 835 Query: 846 gggatggcggaggcggtgcttccgtgggcgtttcgtgggcaggtgccgccgagcatgt 903 |||||||| | ||||||||| || ||||| || ||||| |||||||| |||||||||| Sbjct: 836 gggatggcagtggcggtgctaccatgggcattccgtggccaggtgccaccgagcatgt 893 Score = 89.7 bits (45), Expect = 3e-14 Identities = 81/93 (87%) Strand = Plus / Plus Query: 380 ctttgactgcaacatctgcctcgacttcgctgcagatccagtcgttaccctttgtggcca 439 ||||||||||||||| ||||| || || || ||||| || || ||||| |||||||| || Sbjct: 376 ctttgactgcaacatttgccttgattttgcagcagagccggtggttactctttgtggtca 435 Query: 440 tctgtactgctggccttgcatctacgagtggct 472 ||| |||||||||||||||||||| |||||||| Sbjct: 436 tctctactgctggccttgcatctatgagtggct 468 Score = 44.1 bits (22), Expect = 1.5 Identities = 37/42 (88%) Strand = Plus / Plus Query: 680 catcgatgacctgcaccaccagaacatggagcccagccctcc 721 ||||||||| | |||||| |||||||||| ||||||||||| Sbjct: 676 catcgatgatcggcaccatgagaacatggaacccagccctcc 717
>dbj|AK065326.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002F03, full insert sequence Length = 3579 Score = 105 bits (53), Expect = 5e-19 Identities = 86/97 (88%) Strand = Plus / Plus Query: 954 aggaggcagcagatggaggtggagaggtccctgcaccagatctggttcttcctctttgtg 1013 ||||| || |||||||| || |||||||| ||||| |||||||||||||||||||| || Sbjct: 2559 aggagacatcagatggaagttgagaggtcactgcatcagatctggttcttcctcttcgtt 2618 Query: 1014 tttgtggtgttgtgtctgctcttgttctgaagaaaga 1050 ||||||||| |||| ||||||||||||||||| |||| Sbjct: 2619 tttgtggtgctgtgcctgctcttgttctgaagcaaga 2655 Score = 99.6 bits (50), Expect = 3e-17 Identities = 101/118 (85%) Strand = Plus / Plus Query: 786 taccctccttcaccaatggggcgtggcttgatccattccacggctggaggggtgctagga 845 ||||| || |||||||| ||||||||||||||||| || |||||||| || ||||| || Sbjct: 2394 tacccgccatcaccaattgggcgtggcttgatccactcgacggctggtggtgtgcttggg 2453 Query: 846 gggatggcggaggcggtgcttccgtgggcgtttcgtgggcaggtgccgccgagcatgt 903 |||||||| | ||||||||| || ||||| || ||||| |||||||| |||||||||| Sbjct: 2454 gggatggcagtggcggtgctaccatgggcattccgtggccaggtgccaccgagcatgt 2511 Score = 89.7 bits (45), Expect = 3e-14 Identities = 81/93 (87%) Strand = Plus / Plus Query: 380 ctttgactgcaacatctgcctcgacttcgctgcagatccagtcgttaccctttgtggcca 439 ||||||||||||||| ||||| || || || ||||| || || ||||| |||||||| || Sbjct: 1994 ctttgactgcaacatttgccttgattttgcagcagagccggtggttactctttgtggtca 2053 Query: 440 tctgtactgctggccttgcatctacgagtggct 472 ||| |||||||||||||||||||| |||||||| Sbjct: 2054 tctctactgctggccttgcatctatgagtggct 2086 Score = 44.1 bits (22), Expect = 1.5 Identities = 37/42 (88%) Strand = Plus / Plus Query: 680 catcgatgacctgcaccaccagaacatggagcccagccctcc 721 ||||||||| | |||||| |||||||||| ||||||||||| Sbjct: 2294 catcgatgatcggcaccatgagaacatggaacccagccctcc 2335
>emb|AL662976.3|OSJN00177 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0074L08, complete sequence Length = 171551 Score = 105 bits (53), Expect = 5e-19 Identities = 86/97 (88%) Strand = Plus / Minus Query: 954 aggaggcagcagatggaggtggagaggtccctgcaccagatctggttcttcctctttgtg 1013 ||||| || |||||||| || |||||||| ||||| |||||||||||||||||||| || Sbjct: 147003 aggagacatcagatggaagttgagaggtcactgcatcagatctggttcttcctcttcgtt 146944 Query: 1014 tttgtggtgttgtgtctgctcttgttctgaagaaaga 1050 ||||||||| |||| ||||||||||||||||| |||| Sbjct: 146943 tttgtggtgctgtgcctgctcttgttctgaagcaaga 146907 Score = 99.6 bits (50), Expect = 3e-17 Identities = 101/118 (85%) Strand = Plus / Minus Query: 786 taccctccttcaccaatggggcgtggcttgatccattccacggctggaggggtgctagga 845 ||||| || |||||||| ||||||||||||||||| || |||||||| || ||||| || Sbjct: 147168 tacccgccatcaccaattgggcgtggcttgatccactcgacggctggtggtgtgcttggg 147109 Query: 846 gggatggcggaggcggtgcttccgtgggcgtttcgtgggcaggtgccgccgagcatgt 903 |||||||| | ||||||||| || ||||| || ||||| |||||||| |||||||||| Sbjct: 147108 gggatggcagtggcggtgctaccatgggcattccgtggccaggtgccaccgagcatgt 147051 Score = 89.7 bits (45), Expect = 3e-14 Identities = 81/93 (87%) Strand = Plus / Minus Query: 380 ctttgactgcaacatctgcctcgacttcgctgcagatccagtcgttaccctttgtggcca 439 ||||||||||||||| ||||| || || || ||||| || || ||||| |||||||| || Sbjct: 147568 ctttgactgcaacatttgccttgattttgcagcagagccggtggttactctttgtggtca 147509 Query: 440 tctgtactgctggccttgcatctacgagtggct 472 ||| |||||||||||||||||||| |||||||| Sbjct: 147508 tctctactgctggccttgcatctatgagtggct 147476 Score = 44.1 bits (22), Expect = 1.5 Identities = 37/42 (88%) Strand = Plus / Minus Query: 680 catcgatgacctgcaccaccagaacatggagcccagccctcc 721 ||||||||| | |||||| |||||||||| ||||||||||| Sbjct: 147268 catcgatgatcggcaccatgagaacatggaacccagccctcc 147227
>emb|CT831611.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA014O01, full insert sequence Length = 1168 Score = 81.8 bits (41), Expect = 7e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 958 ggcagcagatggaggtggagaggtccctgcaccagatctggttcttcct 1006 ||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 997 ggcagcacatggaggtggagaggtccctgcaccagatatggttcttcct 1045 Score = 71.9 bits (36), Expect = 7e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 375 ggctcctttgactgcaacatctgcctcgacttcgctgcagatccagtcgttaccctttgt 434 |||| ||| ||||||||||||||||| || ||||| | || || || || ||||| || Sbjct: 360 ggctgcttcgactgcaacatctgcctggatttcgccacggagccggtggtcaccctctgc 419 Query: 435 ggccatctgtactgctggccttgcatctacgagtggctgc 474 ||||| || ||||||||||| ||||||||||||||||||| Sbjct: 420 ggccacctctactgctggccctgcatctacgagtggctgc 459
>ref|NM_001054077.1| Oryza sativa (japonica cultivar-group) Os02g0639800 (Os02g0639800) mRNA, complete cds Length = 1460 Score = 81.8 bits (41), Expect = 7e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 958 ggcagcagatggaggtggagaggtccctgcaccagatctggttcttcct 1006 ||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1136 ggcagcacatggaggtggagaggtccctgcaccagatatggttcttcct 1184 Score = 71.9 bits (36), Expect = 7e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 375 ggctcctttgactgcaacatctgcctcgacttcgctgcagatccagtcgttaccctttgt 434 |||| ||| ||||||||||||||||| || ||||| | || || || || ||||| || Sbjct: 499 ggctgcttcgactgcaacatctgcctggatttcgccacggagccggtggtcaccctctgc 558 Query: 435 ggccatctgtactgctggccttgcatctacgagtggctgc 474 ||||| || ||||||||||| ||||||||||||||||||| Sbjct: 559 ggccacctctactgctggccctgcatctacgagtggctgc 598
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 81.8 bits (41), Expect = 7e-12 Identities = 47/49 (95%) Strand = Plus / Minus Query: 958 ggcagcagatggaggtggagaggtccctgcaccagatctggttcttcct 1006 ||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 25690431 ggcagcacatggaggtggagaggtccctgcaccagatatggttcttcct 25690383 Score = 71.9 bits (36), Expect = 7e-09 Identities = 84/100 (84%) Strand = Plus / Minus Query: 375 ggctcctttgactgcaacatctgcctcgacttcgctgcagatccagtcgttaccctttgt 434 |||| ||| ||||||||||||||||| || ||||| | || || || || ||||| || Sbjct: 25691068 ggctgcttcgactgcaacatctgcctggatttcgccacggagccggtggtcaccctctgc 25691009 Query: 435 ggccatctgtactgctggccttgcatctacgagtggctgc 474 ||||| || ||||||||||| ||||||||||||||||||| Sbjct: 25691008 ggccacctctactgctggccctgcatctacgagtggctgc 25690969
>dbj|AP004768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0010C01 Length = 186185 Score = 81.8 bits (41), Expect = 7e-12 Identities = 47/49 (95%) Strand = Plus / Minus Query: 958 ggcagcagatggaggtggagaggtccctgcaccagatctggttcttcct 1006 ||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 93107 ggcagcacatggaggtggagaggtccctgcaccagatatggttcttcct 93059 Score = 71.9 bits (36), Expect = 7e-09 Identities = 84/100 (84%) Strand = Plus / Minus Query: 375 ggctcctttgactgcaacatctgcctcgacttcgctgcagatccagtcgttaccctttgt 434 |||| ||| ||||||||||||||||| || ||||| | || || || || ||||| || Sbjct: 93744 ggctgcttcgactgcaacatctgcctggatttcgccacggagccggtggtcaccctctgc 93685 Query: 435 ggccatctgtactgctggccttgcatctacgagtggctgc 474 ||||| || ||||||||||| ||||||||||||||||||| Sbjct: 93684 ggccacctctactgctggccctgcatctacgagtggctgc 93645
>dbj|AK105980.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-F11, full insert sequence Length = 2038 Score = 81.8 bits (41), Expect = 7e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 958 ggcagcagatggaggtggagaggtccctgcaccagatctggttcttcct 1006 ||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1653 ggcagcacatggaggtggagaggtccctgcaccagatatggttcttcct 1701 Score = 71.9 bits (36), Expect = 7e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 375 ggctcctttgactgcaacatctgcctcgacttcgctgcagatccagtcgttaccctttgt 434 |||| ||| ||||||||||||||||| || ||||| | || || || || ||||| || Sbjct: 1016 ggctgcttcgactgcaacatctgcctggatttcgccacggagccggtggtcaccctctgc 1075 Query: 435 ggccatctgtactgctggccttgcatctacgagtggctgc 474 ||||| || ||||||||||| ||||||||||||||||||| Sbjct: 1076 ggccacctctactgctggccctgcatctacgagtggctgc 1115
>dbj|AK071904.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063D05, full insert sequence Length = 1462 Score = 81.8 bits (41), Expect = 7e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 958 ggcagcagatggaggtggagaggtccctgcaccagatctggttcttcct 1006 ||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1137 ggcagcacatggaggtggagaggtccctgcaccagatatggttcttcct 1185 Score = 71.9 bits (36), Expect = 7e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 375 ggctcctttgactgcaacatctgcctcgacttcgctgcagatccagtcgttaccctttgt 434 |||| ||| ||||||||||||||||| || ||||| | || || || || ||||| || Sbjct: 500 ggctgcttcgactgcaacatctgcctggatttcgccacggagccggtggtcaccctctgc 559 Query: 435 ggccatctgtactgctggccttgcatctacgagtggctgc 474 ||||| || ||||||||||| ||||||||||||||||||| Sbjct: 560 ggccacctctactgctggccctgcatctacgagtggctgc 599
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 75.8 bits (38), Expect = 4e-10 Identities = 65/74 (87%) Strand = Plus / Minus Query: 954 aggaggcagcagatggaggtggagaggtccctgcaccagatctggttcttcctctttgtg 1013 ||||| ||||||||||| || |||||||| ||||| |||||||||||||||||||| || Sbjct: 2682734 aggagacagcagatggaagttgagaggtcgctgcatcagatctggttcttcctcttagtt 2682675 Query: 1014 tttgtggtgttgtg 1027 | ||||||| |||| Sbjct: 2682674 tctgtggtgctgtg 2682661 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1374 attttttcctctcaaatgtgca 1395 |||||||||||||||||||||| Sbjct: 11060087 attttttcctctcaaatgtgca 11060108
>emb|AL954632.3|CNS08CD0 Oryza sativa chromosome 12, . BAC OSJNBa0031E02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151878 Score = 75.8 bits (38), Expect = 4e-10 Identities = 65/74 (87%) Strand = Plus / Minus Query: 954 aggaggcagcagatggaggtggagaggtccctgcaccagatctggttcttcctctttgtg 1013 ||||| ||||||||||| || |||||||| ||||| |||||||||||||||||||| || Sbjct: 51660 aggagacagcagatggaagttgagaggtcgctgcatcagatctggttcttcctcttagtt 51601 Query: 1014 tttgtggtgttgtg 1027 | ||||||| |||| Sbjct: 51600 tctgtggtgctgtg 51587
>dbj|AK070367.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049F10, full insert sequence Length = 2935 Score = 71.9 bits (36), Expect = 7e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 375 ggctcctttgactgcaacatctgcctcgacttcgctgcagatccagtcgttaccctttgt 434 |||| ||| ||||||||||||||||| || ||||| | || || || || ||||| || Sbjct: 2635 ggctgcttcgactgcaacatctgcctggatttcgccacggagccggtggtcaccctctgc 2694 Query: 435 ggccatctgtactgctggccttgcatctacgagtggctgc 474 ||||| || ||||||||||| ||||||||||||||||||| Sbjct: 2695 ggccacctctactgctggccctgcatctacgagtggctgc 2734
>ref|NM_001067593.1| Oryza sativa (japonica cultivar-group) Os08g0162300 (Os08g0162300) mRNA, partial cds Length = 2522 Score = 56.0 bits (28), Expect = 4e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 413 agatccagtcgttaccctttgtggccatctgtactgctggccttgcatctacgagtggct 472 |||||| || ||||||| ||||||||| || | ||||||||||||||| ||| ||||||| Sbjct: 1144 agatcctgtggttaccccttgtggccacctcttctgctggccttgcatataccagtggct 1085
>ref|NM_001067592.1| Oryza sativa (japonica cultivar-group) Os08g0162400 (Os08g0162400) mRNA, complete cds Length = 1953 Score = 56.0 bits (28), Expect = 4e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 413 agatccagtcgttaccctttgtggccatctgtactgctggccttgcatctacgagtggct 472 |||||| || ||||||| ||||||||| || | ||||||||||||||| ||| ||||||| Sbjct: 1158 agatcctgtggttaccccttgtggccacctcttctgctggccttgcatataccagtggct 1217
>gb|AY129244.1| Populus x canescens putative RING protein (RING) mRNA, complete cds Length = 1003 Score = 56.0 bits (28), Expect = 4e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 417 ccagtcgttaccctttgtggccatctgtactgctggccttgcatctacgagtggct 472 ||||| || ||||| |||||||| || ||||||||||| ||||||||| ||||||| Sbjct: 277 ccagtagtcaccctctgtggccacctctactgctggccctgcatctacaagtggct 332
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 56.0 bits (28), Expect = 4e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 413 agatccagtcgttaccctttgtggccatctgtactgctggccttgcatctacgagtggct 472 |||||| || ||||||| ||||||||| || | ||||||||||||||| ||| ||||||| Sbjct: 3680508 agatcctgtggttaccccttgtggccacctcttctgctggccttgcatataccagtggct 3680449
>dbj|AP005847.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ9990_A01 Length = 101684 Score = 56.0 bits (28), Expect = 4e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 413 agatccagtcgttaccctttgtggccatctgtactgctggccttgcatctacgagtggct 472 |||||| || ||||||| ||||||||| || | ||||||||||||||| ||| ||||||| Sbjct: 4005 agatcctgtggttaccccttgtggccacctcttctgctggccttgcatataccagtggct 3946
>dbj|AP005504.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0577B11 Length = 180355 Score = 56.0 bits (28), Expect = 4e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 413 agatccagtcgttaccctttgtggccatctgtactgctggccttgcatctacgagtggct 472 |||||| || ||||||| ||||||||| || | ||||||||||||||| ||| ||||||| Sbjct: 159014 agatcctgtggttaccccttgtggccacctcttctgctggccttgcatataccagtggct 158955
>dbj|AK102462.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094D12, full insert sequence Length = 1874 Score = 56.0 bits (28), Expect = 4e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 413 agatccagtcgttaccctttgtggccatctgtactgctggccttgcatctacgagtggct 472 |||||| || ||||||| ||||||||| || | ||||||||||||||| ||| ||||||| Sbjct: 1084 agatcctgtggttaccccttgtggccacctcttctgctggccttgcatataccagtggct 1143
>dbj|AK067263.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096G17, full insert sequence Length = 2524 Score = 56.0 bits (28), Expect = 4e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 413 agatccagtcgttaccctttgtggccatctgtactgctggccttgcatctacgagtggct 472 |||||| || ||||||| ||||||||| || | ||||||||||||||| ||| ||||||| Sbjct: 1146 agatcctgtggttaccccttgtggccacctcttctgctggccttgcatataccagtggct 1087
>dbj|AK063453.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-G04, full insert sequence Length = 1952 Score = 56.0 bits (28), Expect = 4e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 413 agatccagtcgttaccctttgtggccatctgtactgctggccttgcatctacgagtggct 472 |||||| || ||||||| ||||||||| || | ||||||||||||||| ||| ||||||| Sbjct: 1157 agatcctgtggttaccccttgtggccacctcttctgctggccttgcatataccagtggct 1216
>ref|NM_001073126.1| Oryza sativa (japonica cultivar-group) Os12g0288600 (Os12g0288600) mRNA, complete cds Length = 1922 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1374 attttttcctctcaaatgtgca 1395 |||||||||||||||||||||| Sbjct: 1644 attttttcctctcaaatgtgca 1623
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 158 ccctgggcggcggcgcgcgtgc 179 |||||||||||||||||||||| Sbjct: 1349871 ccctgggcggcggcgcgcgtgc 1349892
>emb|AL138707.10| Human DNA sequence from clone RP11-430M15 on chromosome 13 Contains the 3' end of a novel gene (FLJ22153) and the 3' end of the gene for a novel protein (ortholog of rat putative four repeat ion channel), complete sequence Length = 181311 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 23 accttctcctcccccacctcct 44 |||||||||||||||||||||| Sbjct: 19598 accttctcctcccccacctcct 19577
>dbj|AK064558.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-112-C07, full insert sequence Length = 1921 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1374 attttttcctctcaaatgtgca 1395 |||||||||||||||||||||| Sbjct: 1643 attttttcctctcaaatgtgca 1622
>emb|AL831796.5|CNS08CA9 Oryza sativa chromosome 12, . BAC OSJNBa0012G19 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 157771 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1374 attttttcctctcaaatgtgca 1395 |||||||||||||||||||||| Sbjct: 126087 attttttcctctcaaatgtgca 126066
>emb|AL844875.4|CNS08CAY Oryza sativa chromosome 12, . BAC OSJNBb0032I14 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 134082 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1374 attttttcctctcaaatgtgca 1395 |||||||||||||||||||||| Sbjct: 45488 attttttcctctcaaatgtgca 45467
>emb|CT828714.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN041G16, full insert sequence Length = 1411 Score = 42.1 bits (21), Expect = 5.8 Identities = 45/53 (84%) Strand = Plus / Plus Query: 420 gtcgttaccctttgtggccatctgtactgctggccttgcatctacgagtggct 472 ||||| ||||| || ||||| || | ||||||||| ||| ||||||||||||| Sbjct: 468 gtcgtcaccctctgcggccacctcttctgctggccgtgcctctacgagtggct 520
>emb|CT830958.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA042G04, full insert sequence Length = 1131 Score = 42.1 bits (21), Expect = 5.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 153 gcgacccctgggcggcggcgc 173 ||||||||||||||||||||| Sbjct: 295 gcgacccctgggcggcggcgc 275
>ref|NM_001056284.1| Oryza sativa (japonica cultivar-group) Os03g0282900 (Os03g0282900) mRNA, complete cds Length = 1123 Score = 42.1 bits (21), Expect = 5.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 153 gcgacccctgggcggcggcgc 173 ||||||||||||||||||||| Sbjct: 288 gcgacccctgggcggcggcgc 268
>ref|NM_001050889.1| Oryza sativa (japonica cultivar-group) Os01g0766200 (Os01g0766200) mRNA, partial cds Length = 1381 Score = 42.1 bits (21), Expect = 5.8 Identities = 45/53 (84%) Strand = Plus / Plus Query: 420 gtcgttaccctttgtggccatctgtactgctggccttgcatctacgagtggct 472 ||||| ||||| || ||||| || | ||||||||| ||| ||||||||||||| Sbjct: 470 gtcgtcaccctctgcggccacctcttctgctggccgtgcctctacgagtggct 522
>ref|XR_012914.1| PREDICTED: Macaca mulatta similar to Ras association and pleckstrin homology domains 1 isoform 1 (LOC705065), mRNA Length = 5356 Score = 42.1 bits (21), Expect = 5.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 20 cccaccttctcctcccccacctcct 44 ||||||| ||||||||||||||||| Sbjct: 1899 cccacctcctcctcccccacctcct 1923
>gb|AC123673.8| Mus musculus chromosome 1, clone RP23-258D13, complete sequence Length = 164997 Score = 42.1 bits (21), Expect = 5.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 23 accttctcctcccccacctcc 43 ||||||||||||||||||||| Sbjct: 49270 accttctcctcccccacctcc 49290
>ref|NM_125010.2| Arabidopsis thaliana WRKY2; transcription factor (WRKY2) mRNA, complete cds Length = 2798 Score = 42.1 bits (21), Expect = 5.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 ccttctcctcccccacctcct 44 ||||||||||||||||||||| Sbjct: 1940 ccttctcctcccccacctcct 1920
>gb|AC167201.6| Mus musculus 10 BAC RP23-402J11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 216676 Score = 42.1 bits (21), Expect = 5.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 ccttctcctcccccacctcct 44 ||||||||||||||||||||| Sbjct: 59000 ccttctcctcccccacctcct 58980
>gb|AC131081.7| Mus musculus chromosome 10, clone RP23-438J1, complete sequence Length = 214060 Score = 42.1 bits (21), Expect = 5.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 ttctcctcccccacctccttc 46 ||||||||||||||||||||| Sbjct: 172631 ttctcctcccccacctccttc 172651
>gb|AC124764.3| Mus musculus BAC clone RP23-166K1 from chromosome 18, complete sequence Length = 209579 Score = 42.1 bits (21), Expect = 5.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 20 cccaccttctcctcccccacc 40 ||||||||||||||||||||| Sbjct: 151655 cccaccttctcctcccccacc 151635
>gb|AC084405.6| Oryza sativa chromosome 3 BAC OSJNBa0044H10 genomic sequence, complete sequence Length = 165113 Score = 42.1 bits (21), Expect = 5.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 153 gcgacccctgggcggcggcgc 173 ||||||||||||||||||||| Sbjct: 96868 gcgacccctgggcggcggcgc 96848
>gb|AC162297.5| Mus musculus chromosome 18, clone RP24-276H6, complete sequence Length = 190293 Score = 42.1 bits (21), Expect = 5.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 20 cccaccttctcctcccccacc 40 ||||||||||||||||||||| Sbjct: 45275 cccaccttctcctcccccacc 45255
>gb|AY123006.1| Arabidopsis thaliana putative transcription factor NtWRKY4 (At5g56270) mRNA, complete cds Length = 2095 Score = 42.1 bits (21), Expect = 5.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 ccttctcctcccccacctcct 44 ||||||||||||||||||||| Sbjct: 1337 ccttctcctcccccacctcct 1317
>gb|AY096493.1| Arabidopsis thaliana putative transcription factor NtWRKY4 (At5g56270) mRNA, complete cds Length = 2739 Score = 42.1 bits (21), Expect = 5.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 ccttctcctcccccacctcct 44 ||||||||||||||||||||| Sbjct: 1931 ccttctcctcccccacctcct 1911
>gb|AC021106.6| Homo sapiens BAC clone RP11-177C12 from 4, complete sequence Length = 195108 Score = 42.1 bits (21), Expect = 5.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1398 tggaatctgcactattctcttcttt 1422 |||||||||||| |||||||||||| Sbjct: 82140 tggaatctgcaccattctcttcttt 82164
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 42.1 bits (21), Expect = 5.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 153 gcgacccctgggcggcggcgc 173 ||||||||||||||||||||| Sbjct: 9674090 gcgacccctgggcggcggcgc 9674070
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 42.1 bits (21), Expect = 5.8 Identities = 45/53 (84%) Strand = Plus / Minus Query: 420 gtcgttaccctttgtggccatctgtactgctggccttgcatctacgagtggct 472 ||||| ||||| || ||||| || | ||||||||| ||| ||||||||||||| Sbjct: 32270752 gtcgtcaccctctgcggccacctcttctgctggccgtgcctctacgagtggct 32270700
>emb|Z83827.1|HS473J6 Human DNA sequence from clone RP3-473J6 on chromosome Xq21.1, complete sequence Length = 135686 Score = 42.1 bits (21), Expect = 5.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1264 tggaggtgaaatgcaattctcattc 1288 |||||||||||| |||||||||||| Sbjct: 29794 tggaggtgaaatccaattctcattc 29818
>gb|AF418308.1|AF418308 Arabidopsis thaliana WRKY transcription factor 2 (WRKY2) mRNA, complete cds Length = 2064 Score = 42.1 bits (21), Expect = 5.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 ccttctcctcccccacctcct 44 ||||||||||||||||||||| Sbjct: 1337 ccttctcctcccccacctcct 1317
>dbj|AP003239.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0403C05 Length = 151085 Score = 42.1 bits (21), Expect = 5.8 Identities = 45/53 (84%) Strand = Plus / Minus Query: 420 gtcgttaccctttgtggccatctgtactgctggccttgcatctacgagtggct 472 ||||| ||||| || ||||| || | ||||||||| ||| ||||||||||||| Sbjct: 141505 gtcgtcaccctctgcggccacctcttctgctggccgtgcctctacgagtggct 141453
>emb|BX640943.1|HSM807092 Homo sapiens genomic DNA; cDNA DKFZp686O10123 (from clone DKFZp686O10123) Length = 6934 Score = 42.1 bits (21), Expect = 5.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1398 tggaatctgcactattctcttcttt 1422 |||||||||||| |||||||||||| Sbjct: 4527 tggaatctgcaccattctcttcttt 4551
>gb|AC160029.3| Mus musculus 10 BAC RP24-105I7 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 184696 Score = 42.1 bits (21), Expect = 5.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 ccttctcctcccccacctcct 44 ||||||||||||||||||||| Sbjct: 5512 ccttctcctcccccacctcct 5532
>dbj|AP003377.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0053G03 Length = 101901 Score = 42.1 bits (21), Expect = 5.8 Identities = 45/53 (84%) Strand = Plus / Minus Query: 420 gtcgttaccctttgtggccatctgtactgctggccttgcatctacgagtggct 472 ||||| ||||| || ||||| || | ||||||||| ||| ||||||||||||| Sbjct: 3037 gtcgtcaccctctgcggccacctcttctgctggccgtgcctctacgagtggct 2985
>dbj|AB026656.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MXK23 Length = 9670 Score = 42.1 bits (21), Expect = 5.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 ccttctcctcccccacctcct 44 ||||||||||||||||||||| Sbjct: 5018 ccttctcctcccccacctcct 4998
>dbj|AK104514.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-B01, full insert sequence Length = 1090 Score = 42.1 bits (21), Expect = 5.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 153 gcgacccctgggcggcggcgc 173 ||||||||||||||||||||| Sbjct: 266 gcgacccctgggcggcggcgc 246
>dbj|AK102161.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086G07, full insert sequence Length = 1124 Score = 42.1 bits (21), Expect = 5.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 153 gcgacccctgggcggcggcgc 173 ||||||||||||||||||||| Sbjct: 289 gcgacccctgggcggcggcgc 269
>dbj|AK070278.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049F08, full insert sequence Length = 1579 Score = 42.1 bits (21), Expect = 5.8 Identities = 45/53 (84%) Strand = Plus / Plus Query: 420 gtcgttaccctttgtggccatctgtactgctggccttgcatctacgagtggct 472 ||||| ||||| || ||||| || | ||||||||| ||| ||||||||||||| Sbjct: 733 gtcgtcaccctctgcggccacctcttctgctggccgtgcctctacgagtggct 785
>dbj|AK069471.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023023M16, full insert sequence Length = 1382 Score = 42.1 bits (21), Expect = 5.8 Identities = 45/53 (84%) Strand = Plus / Plus Query: 420 gtcgttaccctttgtggccatctgtactgctggccttgcatctacgagtggct 472 ||||| ||||| || ||||| || | ||||||||| ||| ||||||||||||| Sbjct: 471 gtcgtcaccctctgcggccacctcttctgctggccgtgcctctacgagtggct 523
>dbj|AK061166.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-A08, full insert sequence Length = 1122 Score = 42.1 bits (21), Expect = 5.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 153 gcgacccctgggcggcggcgc 173 ||||||||||||||||||||| Sbjct: 288 gcgacccctgggcggcggcgc 268
>gb|AC151735.3| Mus musculus BAC clone RP23-24D16 from 9, complete sequence Length = 201762 Score = 42.1 bits (21), Expect = 5.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 19 tcccaccttctcctcccccacctccttct 47 |||| |||||||||||||| ||||||||| Sbjct: 25637 tccccccttctcctccccctcctccttct 25665
>gb|AC140392.3| Mus musculus BAC clone RP24-89F9 from chromosome 9, complete sequence Length = 225973 Score = 42.1 bits (21), Expect = 5.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 19 tcccaccttctcctcccccacctccttct 47 |||| |||||||||||||| ||||||||| Sbjct: 147846 tccccccttctcctccccctcctccttct 147874 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 261,255,663 Number of extensions: 14986010 Number of successful extensions: 342405 Number of sequences better than 10.0: 67 Number of HSP's gapped: 342398 Number of HSP's successfully gapped: 108 Length of query: 1535 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1512 Effective length of database: 18,503,978,556 Effective search space: 27978015576672 Effective search space used: 27978015576672 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)