ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf24g02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|CT828646.1| Oryza sativa (indica cultivar-group) cDNA clone:... 105 5e-19
2emb|CT828645.1| Oryza sativa (indica cultivar-group) cDNA clone:... 105 5e-19
3emb|CT827956.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 105 5e-19
4ref|NM_001059925.1| Oryza sativa (japonica cultivar-group) Os04g... 105 5e-19
5emb|AL442109.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 105 5e-19
6dbj|AB236018.1| Oryza environmental sample genomic DNA, clone: 1... 105 5e-19
7dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 105 5e-19
8emb|AL662984.3|OSJN00183 Oryza sativa genomic DNA, chromosome 4,... 105 5e-19
9dbj|AK104359.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 5e-19
10dbj|AK070732.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 5e-19
11dbj|AK065326.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 5e-19
12emb|AL662976.3|OSJN00177 Oryza sativa genomic DNA, chromosome 4,... 105 5e-19
13emb|CT831611.1| Oryza sativa (indica cultivar-group) cDNA clone:... 82 7e-12
14ref|NM_001054077.1| Oryza sativa (japonica cultivar-group) Os02g... 82 7e-12
15dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 82 7e-12
16dbj|AP004768.3| Oryza sativa (japonica cultivar-group) genomic D... 82 7e-12
17dbj|AK105980.1| Oryza sativa (japonica cultivar-group) cDNA clon... 82 7e-12
18dbj|AK071904.1| Oryza sativa (japonica cultivar-group) cDNA clon... 82 7e-12
19dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 76 4e-10
20emb|AL954632.3|CNS08CD0 Oryza sativa chromosome 12, . BAC OSJNBa... 76 4e-10
21dbj|AK070367.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 7e-09
22ref|NM_001067593.1| Oryza sativa (japonica cultivar-group) Os08g... 56 4e-04
23ref|NM_001067592.1| Oryza sativa (japonica cultivar-group) Os08g... 56 4e-04
24gb|AY129244.1| Populus x canescens putative RING protein (RING) ... 56 4e-04
25dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 56 4e-04
26dbj|AP005847.4| Oryza sativa (japonica cultivar-group) genomic D... 56 4e-04
27dbj|AP005504.3| Oryza sativa (japonica cultivar-group) genomic D... 56 4e-04
28dbj|AK102462.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 4e-04
29dbj|AK067263.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 4e-04
30dbj|AK063453.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 4e-04
31ref|NM_001073126.1| Oryza sativa (japonica cultivar-group) Os12g... 44 1.5
32dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 44 1.5
33emb|AL138707.10| Human DNA sequence from clone RP11-430M15 on ch... 44 1.5
34dbj|AK064558.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 1.5
35emb|AL831796.5|CNS08CA9 Oryza sativa chromosome 12, . BAC OSJNBa... 44 1.5
36emb|AL844875.4|CNS08CAY Oryza sativa chromosome 12, . BAC OSJNBb... 44 1.5
37emb|CT828714.1| Oryza sativa (indica cultivar-group) cDNA clone:... 42 5.8
38emb|CT830958.1| Oryza sativa (indica cultivar-group) cDNA clone:... 42 5.8
39ref|NM_001056284.1| Oryza sativa (japonica cultivar-group) Os03g... 42 5.8
40ref|NM_001050889.1| Oryza sativa (japonica cultivar-group) Os01g... 42 5.8
41ref|XR_012914.1| PREDICTED: Macaca mulatta similar to Ras associ... 42 5.8
42gb|AC123673.8| Mus musculus chromosome 1, clone RP23-258D13, com... 42 5.8
43ref|NM_125010.2| Arabidopsis thaliana WRKY2; transcription facto... 42 5.8
44gb|AC167201.6| Mus musculus 10 BAC RP23-402J11 (Roswell Park Can... 42 5.8
45gb|AC131081.7| Mus musculus chromosome 10, clone RP23-438J1, com... 42 5.8
46gb|AC124764.3| Mus musculus BAC clone RP23-166K1 from chromosome... 42 5.8
47gb|AC084405.6| Oryza sativa chromosome 3 BAC OSJNBa0044H10 genom... 42 5.8
48gb|AC162297.5| Mus musculus chromosome 18, clone RP24-276H6, com... 42 5.8
49gb|AY123006.1| Arabidopsis thaliana putative transcription facto... 42 5.8
50gb|AY096493.1| Arabidopsis thaliana putative transcription facto... 42 5.8
51gb|AC021106.6| Homo sapiens BAC clone RP11-177C12 from 4, comple... 42 5.8
52dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 5.8
53dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 5.8
54emb|Z83827.1|HS473J6 Human DNA sequence from clone RP3-473J6 on ... 42 5.8
55gb|AF418308.1|AF418308 Arabidopsis thaliana WRKY transcription f... 42 5.8
56dbj|AP003239.3| Oryza sativa (japonica cultivar-group) genomic D... 42 5.8
57emb|BX640943.1|HSM807092 Homo sapiens genomic DNA; cDNA DKFZp686... 42 5.8
58gb|AC160029.3| Mus musculus 10 BAC RP24-105I7 (Roswell Park Canc... 42 5.8
59dbj|AP003377.3| Oryza sativa (japonica cultivar-group) genomic D... 42 5.8
60dbj|AB026656.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 42 5.8
61dbj|AK104514.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 5.8
62dbj|AK102161.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 5.8
63dbj|AK070278.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 5.8
64dbj|AK069471.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 5.8
65dbj|AK061166.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 5.8
66gb|AC151735.3| Mus musculus BAC clone RP23-24D16 from 9, complet... 42 5.8
67gb|AC140392.3| Mus musculus BAC clone RP24-89F9 from chromosome ... 42 5.8

>emb|CT828646.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA221N13, full
            insert sequence
          Length = 1213
 Score =  105 bits (53), Expect = 5e-19
 Identities = 86/97 (88%)
 Strand = Plus / Plus

                                                                        
Query: 954  aggaggcagcagatggaggtggagaggtccctgcaccagatctggttcttcctctttgtg 1013
            ||||| || |||||||| || |||||||| ||||| |||||||||||||||||||| || 
Sbjct: 940  aggagacatcagatggaagttgagaggtcactgcatcagatctggttcttcctcttcgtt 999

                                                 
Query: 1014 tttgtggtgttgtgtctgctcttgttctgaagaaaga 1050
            ||||||||| |||| ||||||||||||||||| ||||
Sbjct: 1000 tttgtggtgctgtgcctgctcttgttctgaagcaaga 1036



 Score = 99.6 bits (50), Expect = 3e-17
 Identities = 101/118 (85%)
 Strand = Plus / Plus

                                                                       
Query: 786 taccctccttcaccaatggggcgtggcttgatccattccacggctggaggggtgctagga 845
           ||||| || |||||||| ||||||||||||||||| || |||||||| || ||||| || 
Sbjct: 775 tacccgccatcaccaattgggcgtggcttgatccactcgacggctggtggtgtgcttggg 834

                                                                     
Query: 846 gggatggcggaggcggtgcttccgtgggcgtttcgtgggcaggtgccgccgagcatgt 903
           |||||||| | ||||||||| || ||||| || ||||| |||||||| ||||||||||
Sbjct: 835 gggatggcagtggcggtgctaccatgggcattccgtggccaggtgccaccgagcatgt 892



 Score = 89.7 bits (45), Expect = 3e-14
 Identities = 81/93 (87%)
 Strand = Plus / Plus

                                                                       
Query: 380 ctttgactgcaacatctgcctcgacttcgctgcagatccagtcgttaccctttgtggcca 439
           ||||||||||||||| ||||| || || || ||||| || || ||||| |||||||| ||
Sbjct: 375 ctttgactgcaacatttgccttgattttgcagcagagccggtggttactctttgtggtca 434

                                            
Query: 440 tctgtactgctggccttgcatctacgagtggct 472
           ||| |||||||||||||||||||| ||||||||
Sbjct: 435 tctctactgctggccttgcatctatgagtggct 467



 Score = 44.1 bits (22), Expect = 1.5
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                     
Query: 680 catcgatgacctgcaccaccagaacatggagcccagccctcc 721
           ||||||||| | ||||||  |||||||||| |||||||||||
Sbjct: 675 catcgatgatcggcaccatgagaacatggaacccagccctcc 716



to top

>emb|CT828645.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA107F21, full
            insert sequence
          Length = 1219

 Score =  105 bits (53), Expect = 5e-19
 Identities = 86/97 (88%)
 Strand = Plus / Plus

                                                                        
Query: 954  aggaggcagcagatggaggtggagaggtccctgcaccagatctggttcttcctctttgtg 1013
            ||||| || |||||||| || |||||||| ||||| |||||||||||||||||||| || 
Sbjct: 940  aggagacatcagatggaagttgagaggtcactgcatcagatctggttcttcctcttcgtt 999

                                                 
Query: 1014 tttgtggtgttgtgtctgctcttgttctgaagaaaga 1050
            ||||||||| |||| ||||||||||||||||| ||||
Sbjct: 1000 tttgtggtgctgtgcctgctcttgttctgaagcaaga 1036



 Score = 99.6 bits (50), Expect = 3e-17
 Identities = 101/118 (85%)
 Strand = Plus / Plus

                                                                       
Query: 786 taccctccttcaccaatggggcgtggcttgatccattccacggctggaggggtgctagga 845
           ||||| || |||||||| ||||||||||||||||| || |||||||| || ||||| || 
Sbjct: 775 tacccgccatcaccaattgggcgtggcttgatccactcgacggctggtggtgtgcttggg 834

                                                                     
Query: 846 gggatggcggaggcggtgcttccgtgggcgtttcgtgggcaggtgccgccgagcatgt 903
           |||||||| | ||||||||| || ||||| || ||||| |||||||| ||||||||||
Sbjct: 835 gggatggcagtggcggtgctaccatgggcattccgtggccaggtgccaccgagcatgt 892



 Score = 89.7 bits (45), Expect = 3e-14
 Identities = 81/93 (87%)
 Strand = Plus / Plus

                                                                       
Query: 380 ctttgactgcaacatctgcctcgacttcgctgcagatccagtcgttaccctttgtggcca 439
           ||||||||||||||| ||||| || || || ||||| || || ||||| |||||||| ||
Sbjct: 375 ctttgactgcaacatttgccttgattttgcagcagagccggtggttactctttgtggtca 434

                                            
Query: 440 tctgtactgctggccttgcatctacgagtggct 472
           ||| |||||||||||||||||||| ||||||||
Sbjct: 435 tctctactgctggccttgcatctatgagtggct 467



 Score = 44.1 bits (22), Expect = 1.5
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                     
Query: 680 catcgatgacctgcaccaccagaacatggagcccagccctcc 721
           ||||||||| | ||||||  |||||||||| |||||||||||
Sbjct: 675 catcgatgatcggcaccatgagaacatggaacccagccctcc 716



to top

>emb|CT827956.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0155K17,
             complete sequence
          Length = 81888

 Score =  105 bits (53), Expect = 5e-19
 Identities = 86/97 (88%)
 Strand = Plus / Minus

                                                                         
Query: 954   aggaggcagcagatggaggtggagaggtccctgcaccagatctggttcttcctctttgtg 1013
             ||||| || |||||||| || |||||||| ||||| |||||||||||||||||||| || 
Sbjct: 71294 aggagacatcagatggaagttgagaggtcactgcatcagatctggttcttcctcttcgtt 71235

                                                  
Query: 1014  tttgtggtgttgtgtctgctcttgttctgaagaaaga 1050
             ||||||||| |||| ||||||||||||||||| ||||
Sbjct: 71234 tttgtggtgctgtgcctgctcttgttctgaagcaaga 71198



 Score = 99.6 bits (50), Expect = 3e-17
 Identities = 101/118 (85%)
 Strand = Plus / Minus

                                                                         
Query: 786   taccctccttcaccaatggggcgtggcttgatccattccacggctggaggggtgctagga 845
             ||||| || |||||||| ||||||||||||||||| || |||||||| || ||||| || 
Sbjct: 71459 tacccgccatcaccaattgggcgtggcttgatccactcgacggctggtggtgtgcttggg 71400

                                                                       
Query: 846   gggatggcggaggcggtgcttccgtgggcgtttcgtgggcaggtgccgccgagcatgt 903
             |||||||| | ||||||||| || ||||| || ||||| |||||||| ||||||||||
Sbjct: 71399 gggatggcagtggcggtgctaccatgggcattccgtggccaggtgccaccgagcatgt 71342



 Score = 89.7 bits (45), Expect = 3e-14
 Identities = 81/93 (87%)
 Strand = Plus / Minus

                                                                         
Query: 380   ctttgactgcaacatctgcctcgacttcgctgcagatccagtcgttaccctttgtggcca 439
             ||||||||||||||| ||||| || || || ||||| || || ||||| |||||||| ||
Sbjct: 71859 ctttgactgcaacatttgccttgattttgcagcagagccggtggttactctttgtggtca 71800

                                              
Query: 440   tctgtactgctggccttgcatctacgagtggct 472
             ||| |||||||||||||||||||| ||||||||
Sbjct: 71799 tctctactgctggccttgcatctatgagtggct 71767



 Score = 44.1 bits (22), Expect = 1.5
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 680   catcgatgacctgcaccaccagaacatggagcccagccctcc 721
             ||||||||| | ||||||  |||||||||| |||||||||||
Sbjct: 71559 catcgatgatcggcaccatgagaacatggaacccagccctcc 71518



to top

>ref|NM_001059925.1| Oryza sativa (japonica cultivar-group) Os04g0530500 (Os04g0530500)
            mRNA, complete cds
          Length = 1219

 Score =  105 bits (53), Expect = 5e-19
 Identities = 86/97 (88%)
 Strand = Plus / Plus

                                                                        
Query: 954  aggaggcagcagatggaggtggagaggtccctgcaccagatctggttcttcctctttgtg 1013
            ||||| || |||||||| || |||||||| ||||| |||||||||||||||||||| || 
Sbjct: 940  aggagacatcagatggaagttgagaggtcactgcatcagatctggttcttcctcttcgtt 999

                                                 
Query: 1014 tttgtggtgttgtgtctgctcttgttctgaagaaaga 1050
            ||||||||| |||| ||||||||||||||||| ||||
Sbjct: 1000 tttgtggtgctgtgcctgctcttgttctgaagcaaga 1036



 Score = 99.6 bits (50), Expect = 3e-17
 Identities = 101/118 (85%)
 Strand = Plus / Plus

                                                                       
Query: 786 taccctccttcaccaatggggcgtggcttgatccattccacggctggaggggtgctagga 845
           ||||| || |||||||| ||||||||||||||||| || |||||||| || ||||| || 
Sbjct: 775 tacccgccatcaccaattgggcgtggcttgatccactcgacggctggtggtgtgcttggg 834

                                                                     
Query: 846 gggatggcggaggcggtgcttccgtgggcgtttcgtgggcaggtgccgccgagcatgt 903
           |||||||| | ||||||||| || ||||| || ||||| |||||||| ||||||||||
Sbjct: 835 gggatggcagtggcggtgctaccatgggcattccgtggccaggtgccaccgagcatgt 892



 Score = 89.7 bits (45), Expect = 3e-14
 Identities = 81/93 (87%)
 Strand = Plus / Plus

                                                                       
Query: 380 ctttgactgcaacatctgcctcgacttcgctgcagatccagtcgttaccctttgtggcca 439
           ||||||||||||||| ||||| || || || ||||| || || ||||| |||||||| ||
Sbjct: 375 ctttgactgcaacatttgccttgattttgcagcagagccggtggttactctttgtggtca 434

                                            
Query: 440 tctgtactgctggccttgcatctacgagtggct 472
           ||| |||||||||||||||||||| ||||||||
Sbjct: 435 tctctactgctggccttgcatctatgagtggct 467



 Score = 44.1 bits (22), Expect = 1.5
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                     
Query: 680 catcgatgacctgcaccaccagaacatggagcccagccctcc 721
           ||||||||| | ||||||  |||||||||| |||||||||||
Sbjct: 675 catcgatgatcggcaccatgagaacatggaacccagccctcc 716



to top

>emb|AL442109.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: B1011H02, complete
            sequence
          Length = 40167

 Score =  105 bits (53), Expect = 5e-19
 Identities = 86/97 (88%)
 Strand = Plus / Minus

                                                                        
Query: 954  aggaggcagcagatggaggtggagaggtccctgcaccagatctggttcttcctctttgtg 1013
            ||||| || |||||||| || |||||||| ||||| |||||||||||||||||||| || 
Sbjct: 5183 aggagacatcagatggaagttgagaggtcactgcatcagatctggttcttcctcttcgtt 5124

                                                 
Query: 1014 tttgtggtgttgtgtctgctcttgttctgaagaaaga 1050
            ||||||||| |||| ||||||||||||||||| ||||
Sbjct: 5123 tttgtggtgctgtgcctgctcttgttctgaagcaaga 5087



 Score = 99.6 bits (50), Expect = 3e-17
 Identities = 101/118 (85%)
 Strand = Plus / Minus

                                                                        
Query: 786  taccctccttcaccaatggggcgtggcttgatccattccacggctggaggggtgctagga 845
            ||||| || |||||||| ||||||||||||||||| || |||||||| || ||||| || 
Sbjct: 5348 tacccgccatcaccaattgggcgtggcttgatccactcgacggctggtggtgtgcttggg 5289

                                                                      
Query: 846  gggatggcggaggcggtgcttccgtgggcgtttcgtgggcaggtgccgccgagcatgt 903
            |||||||| | ||||||||| || ||||| || ||||| |||||||| ||||||||||
Sbjct: 5288 gggatggcagtggcggtgctaccatgggcattccgtggccaggtgccaccgagcatgt 5231



 Score = 89.7 bits (45), Expect = 3e-14
 Identities = 81/93 (87%)
 Strand = Plus / Minus

                                                                        
Query: 380  ctttgactgcaacatctgcctcgacttcgctgcagatccagtcgttaccctttgtggcca 439
            ||||||||||||||| ||||| || || || ||||| || || ||||| |||||||| ||
Sbjct: 5748 ctttgactgcaacatttgccttgattttgcagcagagccggtggttactctttgtggtca 5689

                                             
Query: 440  tctgtactgctggccttgcatctacgagtggct 472
            ||| |||||||||||||||||||| ||||||||
Sbjct: 5688 tctctactgctggccttgcatctatgagtggct 5656



 Score = 44.1 bits (22), Expect = 1.5
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 680  catcgatgacctgcaccaccagaacatggagcccagccctcc 721
            ||||||||| | ||||||  |||||||||| |||||||||||
Sbjct: 5448 catcgatgatcggcaccatgagaacatggaacccagccctcc 5407



to top

>dbj|AB236018.1| Oryza environmental sample genomic DNA, clone: 1B4-2
          Length = 363

 Score =  105 bits (53), Expect = 5e-19
 Identities = 86/97 (88%)
 Strand = Plus / Plus

                                                                        
Query: 954  aggaggcagcagatggaggtggagaggtccctgcaccagatctggttcttcctctttgtg 1013
            ||||| || |||||||| || |||||||| ||||| |||||||||||||||||||| || 
Sbjct: 221  aggagacatcagatggaagttgagaggtcactgcatcagatctggttcttcctcttcgtt 280

                                                 
Query: 1014 tttgtggtgttgtgtctgctcttgttctgaagaaaga 1050
            ||||||||| |||| ||||||||||||||||| ||||
Sbjct: 281  tttgtggtgctgtgcctgctcttgttctgaagcaaga 317



 Score = 99.6 bits (50), Expect = 3e-17
 Identities = 101/118 (85%)
 Strand = Plus / Plus

                                                                       
Query: 786 taccctccttcaccaatggggcgtggcttgatccattccacggctggaggggtgctagga 845
           ||||| || |||||||| ||||||||||||||||| || |||||||| || ||||| || 
Sbjct: 56  tacccgccatcaccaattgggcgtggcttgatccactcgacggctggtggtgtgcttggg 115

                                                                     
Query: 846 gggatggcggaggcggtgcttccgtgggcgtttcgtgggcaggtgccgccgagcatgt 903
           |||||||| | ||||||||| || ||||| || ||||| |||||||| ||||||||||
Sbjct: 116 gggatggcagtggcggtgctaccatgggcattccgtggccaggtgccaccgagcatgt 173



to top

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score =  105 bits (53), Expect = 5e-19
 Identities = 86/97 (88%)
 Strand = Plus / Minus

                                                                            
Query: 954      aggaggcagcagatggaggtggagaggtccctgcaccagatctggttcttcctctttgtg 1013
                ||||| || |||||||| || |||||||| ||||| |||||||||||||||||||| || 
Sbjct: 26506363 aggagacatcagatggaagttgagaggtcactgcatcagatctggttcttcctcttcgtt 26506304

                                                     
Query: 1014     tttgtggtgttgtgtctgctcttgttctgaagaaaga 1050
                ||||||||| |||| ||||||||||||||||| ||||
Sbjct: 26506303 tttgtggtgctgtgcctgctcttgttctgaagcaaga 26506267



 Score = 99.6 bits (50), Expect = 3e-17
 Identities = 101/118 (85%)
 Strand = Plus / Minus

                                                                            
Query: 786      taccctccttcaccaatggggcgtggcttgatccattccacggctggaggggtgctagga 845
                ||||| || |||||||| ||||||||||||||||| || |||||||| || ||||| || 
Sbjct: 26506528 tacccgccatcaccaattgggcgtggcttgatccactcgacggctggtggtgtgcttggg 26506469

                                                                          
Query: 846      gggatggcggaggcggtgcttccgtgggcgtttcgtgggcaggtgccgccgagcatgt 903
                |||||||| | ||||||||| || ||||| || ||||| |||||||| ||||||||||
Sbjct: 26506468 gggatggcagtggcggtgctaccatgggcattccgtggccaggtgccaccgagcatgt 26506411



 Score = 89.7 bits (45), Expect = 3e-14
 Identities = 81/93 (87%)
 Strand = Plus / Minus

                                                                            
Query: 380      ctttgactgcaacatctgcctcgacttcgctgcagatccagtcgttaccctttgtggcca 439
                ||||||||||||||| ||||| || || || ||||| || || ||||| |||||||| ||
Sbjct: 26506928 ctttgactgcaacatttgccttgattttgcagcagagccggtggttactctttgtggtca 26506869

                                                 
Query: 440      tctgtactgctggccttgcatctacgagtggct 472
                ||| |||||||||||||||||||| ||||||||
Sbjct: 26506868 tctctactgctggccttgcatctatgagtggct 26506836



 Score = 44.1 bits (22), Expect = 1.5
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                          
Query: 680      catcgatgacctgcaccaccagaacatggagcccagccctcc 721
                ||||||||| | ||||||  |||||||||| |||||||||||
Sbjct: 26506628 catcgatgatcggcaccatgagaacatggaacccagccctcc 26506587



to top

>emb|AL662984.3|OSJN00183 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081C01,
             complete sequence
          Length = 140454

 Score =  105 bits (53), Expect = 5e-19
 Identities = 86/97 (88%)
 Strand = Plus / Minus

                                                                         
Query: 954   aggaggcagcagatggaggtggagaggtccctgcaccagatctggttcttcctctttgtg 1013
             ||||| || |||||||| || |||||||| ||||| |||||||||||||||||||| || 
Sbjct: 43250 aggagacatcagatggaagttgagaggtcactgcatcagatctggttcttcctcttcgtt 43191

                                                  
Query: 1014  tttgtggtgttgtgtctgctcttgttctgaagaaaga 1050
             ||||||||| |||| ||||||||||||||||| ||||
Sbjct: 43190 tttgtggtgctgtgcctgctcttgttctgaagcaaga 43154



 Score = 99.6 bits (50), Expect = 3e-17
 Identities = 101/118 (85%)
 Strand = Plus / Minus

                                                                         
Query: 786   taccctccttcaccaatggggcgtggcttgatccattccacggctggaggggtgctagga 845
             ||||| || |||||||| ||||||||||||||||| || |||||||| || ||||| || 
Sbjct: 43415 tacccgccatcaccaattgggcgtggcttgatccactcgacggctggtggtgtgcttggg 43356

                                                                       
Query: 846   gggatggcggaggcggtgcttccgtgggcgtttcgtgggcaggtgccgccgagcatgt 903
             |||||||| | ||||||||| || ||||| || ||||| |||||||| ||||||||||
Sbjct: 43355 gggatggcagtggcggtgctaccatgggcattccgtggccaggtgccaccgagcatgt 43298



 Score = 89.7 bits (45), Expect = 3e-14
 Identities = 81/93 (87%)
 Strand = Plus / Minus

                                                                         
Query: 380   ctttgactgcaacatctgcctcgacttcgctgcagatccagtcgttaccctttgtggcca 439
             ||||||||||||||| ||||| || || || ||||| || || ||||| |||||||| ||
Sbjct: 43815 ctttgactgcaacatttgccttgattttgcagcagagccggtggttactctttgtggtca 43756

                                              
Query: 440   tctgtactgctggccttgcatctacgagtggct 472
             ||| |||||||||||||||||||| ||||||||
Sbjct: 43755 tctctactgctggccttgcatctatgagtggct 43723



 Score = 44.1 bits (22), Expect = 1.5
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 680   catcgatgacctgcaccaccagaacatggagcccagccctcc 721
             ||||||||| | ||||||  |||||||||| |||||||||||
Sbjct: 43515 catcgatgatcggcaccatgagaacatggaacccagccctcc 43474



to top

>dbj|AK104359.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-B09, full
            insert sequence
          Length = 1153

 Score =  105 bits (53), Expect = 5e-19
 Identities = 86/97 (88%)
 Strand = Plus / Plus

                                                                        
Query: 954  aggaggcagcagatggaggtggagaggtccctgcaccagatctggttcttcctctttgtg 1013
            ||||| || |||||||| || |||||||| ||||| |||||||||||||||||||| || 
Sbjct: 880  aggagacatcagatggaagttgagaggtcactgcatcagatctggttcttcctcttcgtt 939

                                                 
Query: 1014 tttgtggtgttgtgtctgctcttgttctgaagaaaga 1050
            ||||||||| |||| ||||||||||||||||| ||||
Sbjct: 940  tttgtggtgctgtgcctgctcttgttctgaagcaaga 976



 Score = 99.6 bits (50), Expect = 3e-17
 Identities = 101/118 (85%)
 Strand = Plus / Plus

                                                                       
Query: 786 taccctccttcaccaatggggcgtggcttgatccattccacggctggaggggtgctagga 845
           ||||| || |||||||| ||||||||||||||||| || |||||||| || ||||| || 
Sbjct: 715 tacccgccatcaccaattgggcgtggcttgatccactcgacggctggtggtgtgcttggg 774

                                                                     
Query: 846 gggatggcggaggcggtgcttccgtgggcgtttcgtgggcaggtgccgccgagcatgt 903
           |||||||| | ||||||||| || ||||| || ||||| |||||||| ||||||||||
Sbjct: 775 gggatggcagtggcggtgctaccatgggcattccgtggccaggtgccaccgagcatgt 832



 Score = 89.7 bits (45), Expect = 3e-14
 Identities = 81/93 (87%)
 Strand = Plus / Plus

                                                                       
Query: 380 ctttgactgcaacatctgcctcgacttcgctgcagatccagtcgttaccctttgtggcca 439
           ||||||||||||||| ||||| || || || ||||| || || ||||| |||||||| ||
Sbjct: 315 ctttgactgcaacatttgccttgattttgcagcagagccggtggttactctttgtggtca 374

                                            
Query: 440 tctgtactgctggccttgcatctacgagtggct 472
           ||| |||||||||||||||||||| ||||||||
Sbjct: 375 tctctactgctggccttgcatctatgagtggct 407



 Score = 44.1 bits (22), Expect = 1.5
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                     
Query: 680 catcgatgacctgcaccaccagaacatggagcccagccctcc 721
           ||||||||| | ||||||  |||||||||| |||||||||||
Sbjct: 615 catcgatgatcggcaccatgagaacatggaacccagccctcc 656



to top

>dbj|AK070732.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063I18, full
            insert sequence
          Length = 1220

 Score =  105 bits (53), Expect = 5e-19
 Identities = 86/97 (88%)
 Strand = Plus / Plus

                                                                        
Query: 954  aggaggcagcagatggaggtggagaggtccctgcaccagatctggttcttcctctttgtg 1013
            ||||| || |||||||| || |||||||| ||||| |||||||||||||||||||| || 
Sbjct: 941  aggagacatcagatggaagttgagaggtcactgcatcagatctggttcttcctcttcgtt 1000

                                                 
Query: 1014 tttgtggtgttgtgtctgctcttgttctgaagaaaga 1050
            ||||||||| |||| ||||||||||||||||| ||||
Sbjct: 1001 tttgtggtgctgtgcctgctcttgttctgaagcaaga 1037



 Score = 99.6 bits (50), Expect = 3e-17
 Identities = 101/118 (85%)
 Strand = Plus / Plus

                                                                       
Query: 786 taccctccttcaccaatggggcgtggcttgatccattccacggctggaggggtgctagga 845
           ||||| || |||||||| ||||||||||||||||| || |||||||| || ||||| || 
Sbjct: 776 tacccgccatcaccaattgggcgtggcttgatccactcgacggctggtggtgtgcttggg 835

                                                                     
Query: 846 gggatggcggaggcggtgcttccgtgggcgtttcgtgggcaggtgccgccgagcatgt 903
           |||||||| | ||||||||| || ||||| || ||||| |||||||| ||||||||||
Sbjct: 836 gggatggcagtggcggtgctaccatgggcattccgtggccaggtgccaccgagcatgt 893



 Score = 89.7 bits (45), Expect = 3e-14
 Identities = 81/93 (87%)
 Strand = Plus / Plus

                                                                       
Query: 380 ctttgactgcaacatctgcctcgacttcgctgcagatccagtcgttaccctttgtggcca 439
           ||||||||||||||| ||||| || || || ||||| || || ||||| |||||||| ||
Sbjct: 376 ctttgactgcaacatttgccttgattttgcagcagagccggtggttactctttgtggtca 435

                                            
Query: 440 tctgtactgctggccttgcatctacgagtggct 472
           ||| |||||||||||||||||||| ||||||||
Sbjct: 436 tctctactgctggccttgcatctatgagtggct 468



 Score = 44.1 bits (22), Expect = 1.5
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                     
Query: 680 catcgatgacctgcaccaccagaacatggagcccagccctcc 721
           ||||||||| | ||||||  |||||||||| |||||||||||
Sbjct: 676 catcgatgatcggcaccatgagaacatggaacccagccctcc 717



to top

>dbj|AK065326.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002F03, full
            insert sequence
          Length = 3579

 Score =  105 bits (53), Expect = 5e-19
 Identities = 86/97 (88%)
 Strand = Plus / Plus

                                                                        
Query: 954  aggaggcagcagatggaggtggagaggtccctgcaccagatctggttcttcctctttgtg 1013
            ||||| || |||||||| || |||||||| ||||| |||||||||||||||||||| || 
Sbjct: 2559 aggagacatcagatggaagttgagaggtcactgcatcagatctggttcttcctcttcgtt 2618

                                                 
Query: 1014 tttgtggtgttgtgtctgctcttgttctgaagaaaga 1050
            ||||||||| |||| ||||||||||||||||| ||||
Sbjct: 2619 tttgtggtgctgtgcctgctcttgttctgaagcaaga 2655



 Score = 99.6 bits (50), Expect = 3e-17
 Identities = 101/118 (85%)
 Strand = Plus / Plus

                                                                        
Query: 786  taccctccttcaccaatggggcgtggcttgatccattccacggctggaggggtgctagga 845
            ||||| || |||||||| ||||||||||||||||| || |||||||| || ||||| || 
Sbjct: 2394 tacccgccatcaccaattgggcgtggcttgatccactcgacggctggtggtgtgcttggg 2453

                                                                      
Query: 846  gggatggcggaggcggtgcttccgtgggcgtttcgtgggcaggtgccgccgagcatgt 903
            |||||||| | ||||||||| || ||||| || ||||| |||||||| ||||||||||
Sbjct: 2454 gggatggcagtggcggtgctaccatgggcattccgtggccaggtgccaccgagcatgt 2511



 Score = 89.7 bits (45), Expect = 3e-14
 Identities = 81/93 (87%)
 Strand = Plus / Plus

                                                                        
Query: 380  ctttgactgcaacatctgcctcgacttcgctgcagatccagtcgttaccctttgtggcca 439
            ||||||||||||||| ||||| || || || ||||| || || ||||| |||||||| ||
Sbjct: 1994 ctttgactgcaacatttgccttgattttgcagcagagccggtggttactctttgtggtca 2053

                                             
Query: 440  tctgtactgctggccttgcatctacgagtggct 472
            ||| |||||||||||||||||||| ||||||||
Sbjct: 2054 tctctactgctggccttgcatctatgagtggct 2086



 Score = 44.1 bits (22), Expect = 1.5
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                      
Query: 680  catcgatgacctgcaccaccagaacatggagcccagccctcc 721
            ||||||||| | ||||||  |||||||||| |||||||||||
Sbjct: 2294 catcgatgatcggcaccatgagaacatggaacccagccctcc 2335



to top

>emb|AL662976.3|OSJN00177 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0074L08,
              complete sequence
          Length = 171551

 Score =  105 bits (53), Expect = 5e-19
 Identities = 86/97 (88%)
 Strand = Plus / Minus

                                                                          
Query: 954    aggaggcagcagatggaggtggagaggtccctgcaccagatctggttcttcctctttgtg 1013
              ||||| || |||||||| || |||||||| ||||| |||||||||||||||||||| || 
Sbjct: 147003 aggagacatcagatggaagttgagaggtcactgcatcagatctggttcttcctcttcgtt 146944

                                                   
Query: 1014   tttgtggtgttgtgtctgctcttgttctgaagaaaga 1050
              ||||||||| |||| ||||||||||||||||| ||||
Sbjct: 146943 tttgtggtgctgtgcctgctcttgttctgaagcaaga 146907



 Score = 99.6 bits (50), Expect = 3e-17
 Identities = 101/118 (85%)
 Strand = Plus / Minus

                                                                          
Query: 786    taccctccttcaccaatggggcgtggcttgatccattccacggctggaggggtgctagga 845
              ||||| || |||||||| ||||||||||||||||| || |||||||| || ||||| || 
Sbjct: 147168 tacccgccatcaccaattgggcgtggcttgatccactcgacggctggtggtgtgcttggg 147109

                                                                        
Query: 846    gggatggcggaggcggtgcttccgtgggcgtttcgtgggcaggtgccgccgagcatgt 903
              |||||||| | ||||||||| || ||||| || ||||| |||||||| ||||||||||
Sbjct: 147108 gggatggcagtggcggtgctaccatgggcattccgtggccaggtgccaccgagcatgt 147051



 Score = 89.7 bits (45), Expect = 3e-14
 Identities = 81/93 (87%)
 Strand = Plus / Minus

                                                                          
Query: 380    ctttgactgcaacatctgcctcgacttcgctgcagatccagtcgttaccctttgtggcca 439
              ||||||||||||||| ||||| || || || ||||| || || ||||| |||||||| ||
Sbjct: 147568 ctttgactgcaacatttgccttgattttgcagcagagccggtggttactctttgtggtca 147509

                                               
Query: 440    tctgtactgctggccttgcatctacgagtggct 472
              ||| |||||||||||||||||||| ||||||||
Sbjct: 147508 tctctactgctggccttgcatctatgagtggct 147476



 Score = 44.1 bits (22), Expect = 1.5
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                        
Query: 680    catcgatgacctgcaccaccagaacatggagcccagccctcc 721
              ||||||||| | ||||||  |||||||||| |||||||||||
Sbjct: 147268 catcgatgatcggcaccatgagaacatggaacccagccctcc 147227



to top

>emb|CT831611.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA014O01, full
            insert sequence
          Length = 1168

 Score = 81.8 bits (41), Expect = 7e-12
 Identities = 47/49 (95%)
 Strand = Plus / Plus

                                                             
Query: 958  ggcagcagatggaggtggagaggtccctgcaccagatctggttcttcct 1006
            ||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 997  ggcagcacatggaggtggagaggtccctgcaccagatatggttcttcct 1045



 Score = 71.9 bits (36), Expect = 7e-09
 Identities = 84/100 (84%)
 Strand = Plus / Plus

                                                                       
Query: 375 ggctcctttgactgcaacatctgcctcgacttcgctgcagatccagtcgttaccctttgt 434
           |||| ||| ||||||||||||||||| || |||||  | || || || || ||||| || 
Sbjct: 360 ggctgcttcgactgcaacatctgcctggatttcgccacggagccggtggtcaccctctgc 419

                                                   
Query: 435 ggccatctgtactgctggccttgcatctacgagtggctgc 474
           ||||| || ||||||||||| |||||||||||||||||||
Sbjct: 420 ggccacctctactgctggccctgcatctacgagtggctgc 459



to top

>ref|NM_001054077.1| Oryza sativa (japonica cultivar-group) Os02g0639800 (Os02g0639800)
            mRNA, complete cds
          Length = 1460

 Score = 81.8 bits (41), Expect = 7e-12
 Identities = 47/49 (95%)
 Strand = Plus / Plus

                                                             
Query: 958  ggcagcagatggaggtggagaggtccctgcaccagatctggttcttcct 1006
            ||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1136 ggcagcacatggaggtggagaggtccctgcaccagatatggttcttcct 1184



 Score = 71.9 bits (36), Expect = 7e-09
 Identities = 84/100 (84%)
 Strand = Plus / Plus

                                                                       
Query: 375 ggctcctttgactgcaacatctgcctcgacttcgctgcagatccagtcgttaccctttgt 434
           |||| ||| ||||||||||||||||| || |||||  | || || || || ||||| || 
Sbjct: 499 ggctgcttcgactgcaacatctgcctggatttcgccacggagccggtggtcaccctctgc 558

                                                   
Query: 435 ggccatctgtactgctggccttgcatctacgagtggctgc 474
           ||||| || ||||||||||| |||||||||||||||||||
Sbjct: 559 ggccacctctactgctggccctgcatctacgagtggctgc 598



to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score = 81.8 bits (41), Expect = 7e-12
 Identities = 47/49 (95%)
 Strand = Plus / Minus

                                                                 
Query: 958      ggcagcagatggaggtggagaggtccctgcaccagatctggttcttcct 1006
                ||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 25690431 ggcagcacatggaggtggagaggtccctgcaccagatatggttcttcct 25690383



 Score = 71.9 bits (36), Expect = 7e-09
 Identities = 84/100 (84%)
 Strand = Plus / Minus

                                                                            
Query: 375      ggctcctttgactgcaacatctgcctcgacttcgctgcagatccagtcgttaccctttgt 434
                |||| ||| ||||||||||||||||| || |||||  | || || || || ||||| || 
Sbjct: 25691068 ggctgcttcgactgcaacatctgcctggatttcgccacggagccggtggtcaccctctgc 25691009

                                                        
Query: 435      ggccatctgtactgctggccttgcatctacgagtggctgc 474
                ||||| || ||||||||||| |||||||||||||||||||
Sbjct: 25691008 ggccacctctactgctggccctgcatctacgagtggctgc 25690969



to top

>dbj|AP004768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0010C01
          Length = 186185

 Score = 81.8 bits (41), Expect = 7e-12
 Identities = 47/49 (95%)
 Strand = Plus / Minus

                                                              
Query: 958   ggcagcagatggaggtggagaggtccctgcaccagatctggttcttcct 1006
             ||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 93107 ggcagcacatggaggtggagaggtccctgcaccagatatggttcttcct 93059



 Score = 71.9 bits (36), Expect = 7e-09
 Identities = 84/100 (84%)
 Strand = Plus / Minus

                                                                         
Query: 375   ggctcctttgactgcaacatctgcctcgacttcgctgcagatccagtcgttaccctttgt 434
             |||| ||| ||||||||||||||||| || |||||  | || || || || ||||| || 
Sbjct: 93744 ggctgcttcgactgcaacatctgcctggatttcgccacggagccggtggtcaccctctgc 93685

                                                     
Query: 435   ggccatctgtactgctggccttgcatctacgagtggctgc 474
             ||||| || ||||||||||| |||||||||||||||||||
Sbjct: 93684 ggccacctctactgctggccctgcatctacgagtggctgc 93645



to top

>dbj|AK105980.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-F11, full
            insert sequence
          Length = 2038

 Score = 81.8 bits (41), Expect = 7e-12
 Identities = 47/49 (95%)
 Strand = Plus / Plus

                                                             
Query: 958  ggcagcagatggaggtggagaggtccctgcaccagatctggttcttcct 1006
            ||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1653 ggcagcacatggaggtggagaggtccctgcaccagatatggttcttcct 1701



 Score = 71.9 bits (36), Expect = 7e-09
 Identities = 84/100 (84%)
 Strand = Plus / Plus

                                                                        
Query: 375  ggctcctttgactgcaacatctgcctcgacttcgctgcagatccagtcgttaccctttgt 434
            |||| ||| ||||||||||||||||| || |||||  | || || || || ||||| || 
Sbjct: 1016 ggctgcttcgactgcaacatctgcctggatttcgccacggagccggtggtcaccctctgc 1075

                                                    
Query: 435  ggccatctgtactgctggccttgcatctacgagtggctgc 474
            ||||| || ||||||||||| |||||||||||||||||||
Sbjct: 1076 ggccacctctactgctggccctgcatctacgagtggctgc 1115



to top

>dbj|AK071904.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063D05, full
            insert sequence
          Length = 1462

 Score = 81.8 bits (41), Expect = 7e-12
 Identities = 47/49 (95%)
 Strand = Plus / Plus

                                                             
Query: 958  ggcagcagatggaggtggagaggtccctgcaccagatctggttcttcct 1006
            ||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1137 ggcagcacatggaggtggagaggtccctgcaccagatatggttcttcct 1185



 Score = 71.9 bits (36), Expect = 7e-09
 Identities = 84/100 (84%)
 Strand = Plus / Plus

                                                                       
Query: 375 ggctcctttgactgcaacatctgcctcgacttcgctgcagatccagtcgttaccctttgt 434
           |||| ||| ||||||||||||||||| || |||||  | || || || || ||||| || 
Sbjct: 500 ggctgcttcgactgcaacatctgcctggatttcgccacggagccggtggtcaccctctgc 559

                                                   
Query: 435 ggccatctgtactgctggccttgcatctacgagtggctgc 474
           ||||| || ||||||||||| |||||||||||||||||||
Sbjct: 560 ggccacctctactgctggccctgcatctacgagtggctgc 599



to top

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12
          Length = 27566993

 Score = 75.8 bits (38), Expect = 4e-10
 Identities = 65/74 (87%)
 Strand = Plus / Minus

                                                                           
Query: 954     aggaggcagcagatggaggtggagaggtccctgcaccagatctggttcttcctctttgtg 1013
               ||||| ||||||||||| || |||||||| ||||| |||||||||||||||||||| || 
Sbjct: 2682734 aggagacagcagatggaagttgagaggtcgctgcatcagatctggttcttcctcttagtt 2682675

                             
Query: 1014    tttgtggtgttgtg 1027
               | ||||||| ||||
Sbjct: 2682674 tctgtggtgctgtg 2682661



 Score = 44.1 bits (22), Expect = 1.5
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 1374     attttttcctctcaaatgtgca 1395
                ||||||||||||||||||||||
Sbjct: 11060087 attttttcctctcaaatgtgca 11060108



to top

>emb|AL954632.3|CNS08CD0 Oryza sativa chromosome 12, . BAC OSJNBa0031E02 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 151878

 Score = 75.8 bits (38), Expect = 4e-10
 Identities = 65/74 (87%)
 Strand = Plus / Minus

                                                                         
Query: 954   aggaggcagcagatggaggtggagaggtccctgcaccagatctggttcttcctctttgtg 1013
             ||||| ||||||||||| || |||||||| ||||| |||||||||||||||||||| || 
Sbjct: 51660 aggagacagcagatggaagttgagaggtcgctgcatcagatctggttcttcctcttagtt 51601

                           
Query: 1014  tttgtggtgttgtg 1027
             | ||||||| ||||
Sbjct: 51600 tctgtggtgctgtg 51587



to top

>dbj|AK070367.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049F10, full
            insert sequence
          Length = 2935

 Score = 71.9 bits (36), Expect = 7e-09
 Identities = 84/100 (84%)
 Strand = Plus / Plus

                                                                        
Query: 375  ggctcctttgactgcaacatctgcctcgacttcgctgcagatccagtcgttaccctttgt 434
            |||| ||| ||||||||||||||||| || |||||  | || || || || ||||| || 
Sbjct: 2635 ggctgcttcgactgcaacatctgcctggatttcgccacggagccggtggtcaccctctgc 2694

                                                    
Query: 435  ggccatctgtactgctggccttgcatctacgagtggctgc 474
            ||||| || ||||||||||| |||||||||||||||||||
Sbjct: 2695 ggccacctctactgctggccctgcatctacgagtggctgc 2734



to top

>ref|NM_001067593.1| Oryza sativa (japonica cultivar-group) Os08g0162300 (Os08g0162300)
            mRNA, partial cds
          Length = 2522

 Score = 56.0 bits (28), Expect = 4e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                        
Query: 413  agatccagtcgttaccctttgtggccatctgtactgctggccttgcatctacgagtggct 472
            |||||| || ||||||| ||||||||| || | ||||||||||||||| ||| |||||||
Sbjct: 1144 agatcctgtggttaccccttgtggccacctcttctgctggccttgcatataccagtggct 1085



to top

>ref|NM_001067592.1| Oryza sativa (japonica cultivar-group) Os08g0162400 (Os08g0162400)
            mRNA, complete cds
          Length = 1953

 Score = 56.0 bits (28), Expect = 4e-04
 Identities = 52/60 (86%)
 Strand = Plus / Plus

                                                                        
Query: 413  agatccagtcgttaccctttgtggccatctgtactgctggccttgcatctacgagtggct 472
            |||||| || ||||||| ||||||||| || | ||||||||||||||| ||| |||||||
Sbjct: 1158 agatcctgtggttaccccttgtggccacctcttctgctggccttgcatataccagtggct 1217



to top

>gb|AY129244.1| Populus x canescens putative RING protein (RING) mRNA, complete cds
          Length = 1003

 Score = 56.0 bits (28), Expect = 4e-04
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                   
Query: 417 ccagtcgttaccctttgtggccatctgtactgctggccttgcatctacgagtggct 472
           ||||| || ||||| |||||||| || ||||||||||| ||||||||| |||||||
Sbjct: 277 ccagtagtcaccctctgtggccacctctactgctggccctgcatctacaagtggct 332



to top

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8
          Length = 28434780

 Score = 56.0 bits (28), Expect = 4e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                           
Query: 413     agatccagtcgttaccctttgtggccatctgtactgctggccttgcatctacgagtggct 472
               |||||| || ||||||| ||||||||| || | ||||||||||||||| ||| |||||||
Sbjct: 3680508 agatcctgtggttaccccttgtggccacctcttctgctggccttgcatataccagtggct 3680449



to top

>dbj|AP005847.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
            clone:OJ9990_A01
          Length = 101684

 Score = 56.0 bits (28), Expect = 4e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                        
Query: 413  agatccagtcgttaccctttgtggccatctgtactgctggccttgcatctacgagtggct 472
            |||||| || ||||||| ||||||||| || | ||||||||||||||| ||| |||||||
Sbjct: 4005 agatcctgtggttaccccttgtggccacctcttctgctggccttgcatataccagtggct 3946



to top

>dbj|AP005504.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0577B11
          Length = 180355

 Score = 56.0 bits (28), Expect = 4e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                          
Query: 413    agatccagtcgttaccctttgtggccatctgtactgctggccttgcatctacgagtggct 472
              |||||| || ||||||| ||||||||| || | ||||||||||||||| ||| |||||||
Sbjct: 159014 agatcctgtggttaccccttgtggccacctcttctgctggccttgcatataccagtggct 158955



to top

>dbj|AK102462.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094D12, full
            insert sequence
          Length = 1874

 Score = 56.0 bits (28), Expect = 4e-04
 Identities = 52/60 (86%)
 Strand = Plus / Plus

                                                                        
Query: 413  agatccagtcgttaccctttgtggccatctgtactgctggccttgcatctacgagtggct 472
            |||||| || ||||||| ||||||||| || | ||||||||||||||| ||| |||||||
Sbjct: 1084 agatcctgtggttaccccttgtggccacctcttctgctggccttgcatataccagtggct 1143



to top

>dbj|AK067263.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096G17, full
            insert sequence
          Length = 2524

 Score = 56.0 bits (28), Expect = 4e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                        
Query: 413  agatccagtcgttaccctttgtggccatctgtactgctggccttgcatctacgagtggct 472
            |||||| || ||||||| ||||||||| || | ||||||||||||||| ||| |||||||
Sbjct: 1146 agatcctgtggttaccccttgtggccacctcttctgctggccttgcatataccagtggct 1087



to top

>dbj|AK063453.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-G04, full
            insert sequence
          Length = 1952

 Score = 56.0 bits (28), Expect = 4e-04
 Identities = 52/60 (86%)
 Strand = Plus / Plus

                                                                        
Query: 413  agatccagtcgttaccctttgtggccatctgtactgctggccttgcatctacgagtggct 472
            |||||| || ||||||| ||||||||| || | ||||||||||||||| ||| |||||||
Sbjct: 1157 agatcctgtggttaccccttgtggccacctcttctgctggccttgcatataccagtggct 1216



to top

>ref|NM_001073126.1| Oryza sativa (japonica cultivar-group) Os12g0288600 (Os12g0288600)
            mRNA, complete cds
          Length = 1922

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 1374 attttttcctctcaaatgtgca 1395
            ||||||||||||||||||||||
Sbjct: 1644 attttttcctctcaaatgtgca 1623



to top

>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 158     ccctgggcggcggcgcgcgtgc 179
               ||||||||||||||||||||||
Sbjct: 1349871 ccctgggcggcggcgcgcgtgc 1349892



to top

>emb|AL138707.10| Human DNA sequence from clone RP11-430M15 on chromosome 13 Contains the
             3' end of a novel gene (FLJ22153) and the 3' end of the
             gene for a novel protein (ortholog of rat putative four
             repeat ion channel), complete sequence
          Length = 181311

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 23    accttctcctcccccacctcct 44
             ||||||||||||||||||||||
Sbjct: 19598 accttctcctcccccacctcct 19577



to top

>dbj|AK064558.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-112-C07, full
            insert sequence
          Length = 1921

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 1374 attttttcctctcaaatgtgca 1395
            ||||||||||||||||||||||
Sbjct: 1643 attttttcctctcaaatgtgca 1622



to top

>emb|AL831796.5|CNS08CA9 Oryza sativa chromosome 12, . BAC OSJNBa0012G19 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 157771

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 1374   attttttcctctcaaatgtgca 1395
              ||||||||||||||||||||||
Sbjct: 126087 attttttcctctcaaatgtgca 126066



to top

>emb|AL844875.4|CNS08CAY Oryza sativa chromosome 12, . BAC OSJNBb0032I14 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 134082

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 1374  attttttcctctcaaatgtgca 1395
             ||||||||||||||||||||||
Sbjct: 45488 attttttcctctcaaatgtgca 45467



to top

>emb|CT828714.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN041G16, full
           insert sequence
          Length = 1411

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 420 gtcgttaccctttgtggccatctgtactgctggccttgcatctacgagtggct 472
           ||||| ||||| || ||||| || | ||||||||| ||| |||||||||||||
Sbjct: 468 gtcgtcaccctctgcggccacctcttctgctggccgtgcctctacgagtggct 520



to top

>emb|CT830958.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA042G04, full
           insert sequence
          Length = 1131

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 153 gcgacccctgggcggcggcgc 173
           |||||||||||||||||||||
Sbjct: 295 gcgacccctgggcggcggcgc 275



to top

>ref|NM_001056284.1| Oryza sativa (japonica cultivar-group) Os03g0282900 (Os03g0282900)
           mRNA, complete cds
          Length = 1123

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 153 gcgacccctgggcggcggcgc 173
           |||||||||||||||||||||
Sbjct: 288 gcgacccctgggcggcggcgc 268



to top

>ref|NM_001050889.1| Oryza sativa (japonica cultivar-group) Os01g0766200 (Os01g0766200)
           mRNA, partial cds
          Length = 1381

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 420 gtcgttaccctttgtggccatctgtactgctggccttgcatctacgagtggct 472
           ||||| ||||| || ||||| || | ||||||||| ||| |||||||||||||
Sbjct: 470 gtcgtcaccctctgcggccacctcttctgctggccgtgcctctacgagtggct 522



to top

>ref|XR_012914.1| PREDICTED: Macaca mulatta similar to Ras association and pleckstrin
            homology domains 1 isoform 1 (LOC705065), mRNA
          Length = 5356

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 20   cccaccttctcctcccccacctcct 44
            ||||||| |||||||||||||||||
Sbjct: 1899 cccacctcctcctcccccacctcct 1923



to top

>gb|AC123673.8| Mus musculus chromosome 1, clone RP23-258D13, complete sequence
          Length = 164997

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 23    accttctcctcccccacctcc 43
             |||||||||||||||||||||
Sbjct: 49270 accttctcctcccccacctcc 49290



to top

>ref|NM_125010.2| Arabidopsis thaliana WRKY2; transcription factor (WRKY2) mRNA,
            complete cds
          Length = 2798

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 24   ccttctcctcccccacctcct 44
            |||||||||||||||||||||
Sbjct: 1940 ccttctcctcccccacctcct 1920



to top

>gb|AC167201.6| Mus musculus 10 BAC RP23-402J11 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 216676

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 24    ccttctcctcccccacctcct 44
             |||||||||||||||||||||
Sbjct: 59000 ccttctcctcccccacctcct 58980



to top

>gb|AC131081.7| Mus musculus chromosome 10, clone RP23-438J1, complete sequence
          Length = 214060

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 26     ttctcctcccccacctccttc 46
              |||||||||||||||||||||
Sbjct: 172631 ttctcctcccccacctccttc 172651



to top

>gb|AC124764.3| Mus musculus BAC clone RP23-166K1 from chromosome 18, complete sequence
          Length = 209579

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 20     cccaccttctcctcccccacc 40
              |||||||||||||||||||||
Sbjct: 151655 cccaccttctcctcccccacc 151635



to top

>gb|AC084405.6| Oryza sativa chromosome 3 BAC OSJNBa0044H10 genomic sequence, complete
             sequence
          Length = 165113

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 153   gcgacccctgggcggcggcgc 173
             |||||||||||||||||||||
Sbjct: 96868 gcgacccctgggcggcggcgc 96848



to top

>gb|AC162297.5| Mus musculus chromosome 18, clone RP24-276H6, complete sequence
          Length = 190293

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 20    cccaccttctcctcccccacc 40
             |||||||||||||||||||||
Sbjct: 45275 cccaccttctcctcccccacc 45255



to top

>gb|AY123006.1| Arabidopsis thaliana putative transcription factor NtWRKY4
            (At5g56270) mRNA, complete cds
          Length = 2095

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 24   ccttctcctcccccacctcct 44
            |||||||||||||||||||||
Sbjct: 1337 ccttctcctcccccacctcct 1317



to top

>gb|AY096493.1| Arabidopsis thaliana putative transcription factor NtWRKY4
            (At5g56270) mRNA, complete cds
          Length = 2739

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 24   ccttctcctcccccacctcct 44
            |||||||||||||||||||||
Sbjct: 1931 ccttctcctcccccacctcct 1911



to top

>gb|AC021106.6| Homo sapiens BAC clone RP11-177C12 from 4, complete sequence
          Length = 195108

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 1398  tggaatctgcactattctcttcttt 1422
             |||||||||||| ||||||||||||
Sbjct: 82140 tggaatctgcaccattctcttcttt 82164



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 153     gcgacccctgggcggcggcgc 173
               |||||||||||||||||||||
Sbjct: 9674090 gcgacccctgggcggcggcgc 9674070



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                     
Query: 420      gtcgttaccctttgtggccatctgtactgctggccttgcatctacgagtggct 472
                ||||| ||||| || ||||| || | ||||||||| ||| |||||||||||||
Sbjct: 32270752 gtcgtcaccctctgcggccacctcttctgctggccgtgcctctacgagtggct 32270700



to top

>emb|Z83827.1|HS473J6 Human DNA sequence from clone RP3-473J6 on chromosome Xq21.1, complete
             sequence
          Length = 135686

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 1264  tggaggtgaaatgcaattctcattc 1288
             |||||||||||| ||||||||||||
Sbjct: 29794 tggaggtgaaatccaattctcattc 29818



to top

>gb|AF418308.1|AF418308 Arabidopsis thaliana WRKY transcription factor 2 (WRKY2) mRNA,
            complete cds
          Length = 2064

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 24   ccttctcctcccccacctcct 44
            |||||||||||||||||||||
Sbjct: 1337 ccttctcctcccccacctcct 1317



to top

>dbj|AP003239.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0403C05
          Length = 151085

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                   
Query: 420    gtcgttaccctttgtggccatctgtactgctggccttgcatctacgagtggct 472
              ||||| ||||| || ||||| || | ||||||||| ||| |||||||||||||
Sbjct: 141505 gtcgtcaccctctgcggccacctcttctgctggccgtgcctctacgagtggct 141453



to top

>emb|BX640943.1|HSM807092 Homo sapiens genomic DNA; cDNA DKFZp686O10123 (from clone
            DKFZp686O10123)
          Length = 6934

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 1398 tggaatctgcactattctcttcttt 1422
            |||||||||||| ||||||||||||
Sbjct: 4527 tggaatctgcaccattctcttcttt 4551



to top

>gb|AC160029.3| Mus musculus 10 BAC RP24-105I7 (Roswell Park Cancer Institute
            (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 184696

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 24   ccttctcctcccccacctcct 44
            |||||||||||||||||||||
Sbjct: 5512 ccttctcctcccccacctcct 5532



to top

>dbj|AP003377.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
            clone:OSJNBb0053G03
          Length = 101901

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                 
Query: 420  gtcgttaccctttgtggccatctgtactgctggccttgcatctacgagtggct 472
            ||||| ||||| || ||||| || | ||||||||| ||| |||||||||||||
Sbjct: 3037 gtcgtcaccctctgcggccacctcttctgctggccgtgcctctacgagtggct 2985



to top

>dbj|AB026656.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MXK23
          Length = 9670

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 24   ccttctcctcccccacctcct 44
            |||||||||||||||||||||
Sbjct: 5018 ccttctcctcccccacctcct 4998



to top

>dbj|AK104514.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-B01, full
           insert sequence
          Length = 1090

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 153 gcgacccctgggcggcggcgc 173
           |||||||||||||||||||||
Sbjct: 266 gcgacccctgggcggcggcgc 246



to top

>dbj|AK102161.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086G07, full
           insert sequence
          Length = 1124

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 153 gcgacccctgggcggcggcgc 173
           |||||||||||||||||||||
Sbjct: 289 gcgacccctgggcggcggcgc 269



to top

>dbj|AK070278.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049F08, full
           insert sequence
          Length = 1579

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 420 gtcgttaccctttgtggccatctgtactgctggccttgcatctacgagtggct 472
           ||||| ||||| || ||||| || | ||||||||| ||| |||||||||||||
Sbjct: 733 gtcgtcaccctctgcggccacctcttctgctggccgtgcctctacgagtggct 785



to top

>dbj|AK069471.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023023M16, full
           insert sequence
          Length = 1382

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 420 gtcgttaccctttgtggccatctgtactgctggccttgcatctacgagtggct 472
           ||||| ||||| || ||||| || | ||||||||| ||| |||||||||||||
Sbjct: 471 gtcgtcaccctctgcggccacctcttctgctggccgtgcctctacgagtggct 523



to top

>dbj|AK061166.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-A08, full
           insert sequence
          Length = 1122

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 153 gcgacccctgggcggcggcgc 173
           |||||||||||||||||||||
Sbjct: 288 gcgacccctgggcggcggcgc 268



to top

>gb|AC151735.3| Mus musculus BAC clone RP23-24D16 from 9, complete sequence
          Length = 201762

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 19    tcccaccttctcctcccccacctccttct 47
             |||| |||||||||||||| |||||||||
Sbjct: 25637 tccccccttctcctccccctcctccttct 25665



to top

>gb|AC140392.3| Mus musculus BAC clone RP24-89F9 from chromosome 9, complete sequence
          Length = 225973

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 19     tcccaccttctcctcccccacctccttct 47
              |||| |||||||||||||| |||||||||
Sbjct: 147846 tccccccttctcctccccctcctccttct 147874


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 261,255,663
Number of extensions: 14986010
Number of successful extensions: 342405
Number of sequences better than 10.0: 67
Number of HSP's gapped: 342398
Number of HSP's successfully gapped: 108
Length of query: 1535
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1512
Effective length of database: 18,503,978,556
Effective search space: 27978015576672
Effective search space used: 27978015576672
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
to top