ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf27e12 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK104153:Os02g0652600 | 228 | 5e-60 | 2 | AK073514:Os02g0205000 | 118 | 8e-27 | 3 | AK060003:Os02g0205000 | 118 | 8e-27 | 4 | Os02g0524300:Os02g0524300 | 52 | 7e-07 | 5 | AK068574:Os09g0448200 | 30 | 2.8 | 6 | AK066194:Os09g0448200 | 30 | 2.8 | 7 | D21114:Os05g0445500 | 30 | 3.6 | 8 | AK121459:Os05g0445500 | 30 | 3.6 | 9 | AK058730:Os05g0445500 | 30 | 3.6 |
|---|
>AK104153:Os02g0652600 | Length = 234 Score = 228 bits (581), Expect = 5e-60 Identities = 114/123 (92%), Positives = 117/123 (95%) Frame = +2 Query: 404 PAPRPKPIKFGEIIGILNKQFIEEAEKVKVLPDLKPGDIIELRMQRPNKRRLSLFKGIII 583 P P P+KFGEIIGILNKQFIEEAEKVK LPDL+PGDIIELRMQRPNKRRLSLFKGIII Sbjct: 112 PPPSKPPVKFGEIIGILNKQFIEEAEKVKTLPDLRPGDIIELRMQRPNKRRLSLFKGIII 171 Query: 584 AKHKSGVHTTIRVRRIIASVGVEITFPIYSPRIKEIKVIRHKKVRRAKLYYLKYKLPRFS 763 AKHKSGVHTTIRVRRIIA VGVEITFPIYSPRIKEIKVIRHKKVRRAKLYYLK+KLPRFS Sbjct: 172 AKHKSGVHTTIRVRRIIAGVGVEITFPIYSPRIKEIKVIRHKKVRRAKLYYLKHKLPRFS 231 Query: 764 TFK 772 TFK Sbjct: 232 TFK 234
>AK073514:Os02g0205000 | Length = 222 Score = 118 bits (295), Expect = 8e-27 Identities = 56/105 (53%), Positives = 81/105 (77%), Gaps = 1/105 (0%) Frame = +2 Query: 440 IIGILNKQFIEEAEKVKVLPDLKPGDIIELRMQRP-NKRRLSLFKGIIIAKHKSGVHTTI 616 I+ ILNK+ +++ + +PD++PG II++R+Q P NKRR S KGI+I + +G++TT Sbjct: 113 IMNILNKEAVDKVRGEREIPDVQPGCIIQMRLQVPENKRRESTLKGIVIGRRNAGINTTF 172 Query: 617 RVRRIIASVGVEITFPIYSPRIKEIKVIRHKKVRRAKLYYLKYKL 751 R+RR++A VGVE FP+YSP IKEIKV+ KKVRRAKLYYL+ ++ Sbjct: 173 RLRRLVAGVGVESVFPLYSPNIKEIKVLDRKKVRRAKLYYLRDRM 217
>AK060003:Os02g0205000 | Length = 222 Score = 118 bits (295), Expect = 8e-27 Identities = 56/105 (53%), Positives = 81/105 (77%), Gaps = 1/105 (0%) Frame = +2 Query: 440 IIGILNKQFIEEAEKVKVLPDLKPGDIIELRMQRP-NKRRLSLFKGIIIAKHKSGVHTTI 616 I+ ILNK+ +++ + +PD++PG II++R+Q P NKRR S KGI+I + +G++TT Sbjct: 113 IMNILNKEAVDKVRGEREIPDVQPGCIIQMRLQVPENKRRESTLKGIVIGRRNAGINTTF 172 Query: 617 RVRRIIASVGVEITFPIYSPRIKEIKVIRHKKVRRAKLYYLKYKL 751 R+RR++A VGVE FP+YSP IKEIKV+ KKVRRAKLYYL+ ++ Sbjct: 173 RLRRLVAGVGVESVFPLYSPNIKEIKVLDRKKVRRAKLYYLRDRM 217
>Os02g0524300:Os02g0524300 | Length = 345 Score = 52.0 bits (123), Expect = 7e-07 Identities = 33/101 (32%), Positives = 49/101 (48%) Frame = +2 Query: 449 ILNKQFIEEAEKVKVLPDLKPGDIIELRMQRPNKRRLSLFKGIIIAKHKSGVHTTIRVRR 628 ILN + ++ + +PD++PG I+++R+ N L+L K Sbjct: 264 ILNMEAADKVLGEREIPDVQPGCILQMRLADDNSGMLALPSLFAFCKSN----------- 312 Query: 629 IIASVGVEITFPIYSPRIKEIKVIRHKKVRRAKLYYLKYKL 751 YSP IKEIKV+ KKVRRAKLYYL+ ++ Sbjct: 313 -------------YSPNIKEIKVLDRKKVRRAKLYYLRDRM 340
>AK068574:Os09g0448200 | Length = 707 Score = 30.0 bits (66), Expect = 2.8 Identities = 24/97 (24%), Positives = 43/97 (44%) Frame = -3 Query: 774 HLKVEKRGSLYFR*YNFALLTFLCLITLISLILGEYMGNVISTPTLAIILLTRIVV*TPD 595 H K G +Y N+ L+ LC+ ++ G+ +GN + ++L+T ++ Sbjct: 387 HTSQHKEGEVYSPEINYILMV-LCVGVILGFGGGKAIGNAFGVVVIMVMLITTVL----- 440 Query: 594 LCFAMIIPLKRDNLLLLGRCILSSMMSPGFKSGSTFT 484 L MII + R L+L G + + G + FT Sbjct: 441 LTLVMII-IWRTPLVLAGLYFVPFFIMEGAYVSAVFT 476
>AK066194:Os09g0448200 | Length = 707 Score = 30.0 bits (66), Expect = 2.8 Identities = 24/97 (24%), Positives = 43/97 (44%) Frame = -3 Query: 774 HLKVEKRGSLYFR*YNFALLTFLCLITLISLILGEYMGNVISTPTLAIILLTRIVV*TPD 595 H K G +Y N+ L+ LC+ ++ G+ +GN + ++L+T ++ Sbjct: 387 HTSQHKEGEVYSPEINYILMV-LCVGVILGFGGGKAIGNAFGVVVIMVMLITTVL----- 440 Query: 594 LCFAMIIPLKRDNLLLLGRCILSSMMSPGFKSGSTFT 484 L MII + R L+L G + + G + FT Sbjct: 441 LTLVMII-IWRTPLVLAGLYFVPFFIMEGAYVSAVFT 476
>D21114:Os05g0445500 | Length = 95 Score = 29.6 bits (65), Expect = 3.6 Identities = 14/26 (53%), Positives = 15/26 (57%) Frame = -1 Query: 92 GKDVTAVAWAGGRSEREVPDGGGGRI 15 GKD+T V AG VP GGGG I Sbjct: 48 GKDITEVIAAGREKFASVPSGGGGGI 73
>AK121459:Os05g0445500 | Length = 113 Score = 29.6 bits (65), Expect = 3.6 Identities = 14/26 (53%), Positives = 15/26 (57%) Frame = -1 Query: 92 GKDVTAVAWAGGRSEREVPDGGGGRI 15 GKD+T V AG VP GGGG I Sbjct: 48 GKDITEVIAAGREKFASVPSGGGGGI 73
>AK058730:Os05g0445500 | Length = 75 Score = 29.6 bits (65), Expect = 3.6 Identities = 14/26 (53%), Positives = 15/26 (57%) Frame = -1 Query: 92 GKDVTAVAWAGGRSEREVPDGGGGRI 15 GKD+T V AG VP GGGG I Sbjct: 10 GKDITEVIAAGREKFASVPSGGGGGI 35 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 23,029,233 Number of extensions: 489637 Number of successful extensions: 1763 Number of sequences better than 10.0: 9 Number of HSP's gapped: 1755 Number of HSP's successfully gapped: 9 Length of query: 342 Length of database: 15,399,855 Length adjustment: 101 Effective length of query: 241 Effective length of database: 11,355,714 Effective search space: 2736727074 Effective search space used: 2736727074 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
