| Clone Name | FLbaf27e12 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001054135.1| Oryza sativa (japonica cultivar-group) Os02g0652600 (Os02g0652600) mRNA, partial cds Length = 1002 Score = 309 bits (156), Expect = 1e-80 Identities = 300/348 (86%) Strand = Plus / Plus Query: 426 ttaagttcggcgagatcatcgggattctgaacaagcagttcatcgaggaggctgagaagg 485 |||||||||| |||||||| |||||||||||||| |||||||| ||||||||||| |||| Sbjct: 413 ttaagttcggggagatcattgggattctgaacaaacagttcattgaggaggctgaaaagg 472 Query: 486 tgaaagtacttccggatttgaagcccggtgacatcatcgagcttagaatgcaacgtccca 545 |||| | || ||| | | ||| ||||||||||| ||||||||||||||||| |||| Sbjct: 473 tgaagactttaccagatcttaggcctggtgacatcattgagcttagaatgcaacggccca 532 Query: 546 acaagaggagattgtctctctttaagggtataatcattgcaaagcacaaatctggtgttc 605 |||||||||||||||| ||||||||||| ||||| || ||||| |||||||||||||||| Sbjct: 533 acaagaggagattgtcgctctttaagggcataattatagcaaaacacaaatctggtgttc 592 Query: 606 acaccacgatccgcgtcaggaggattattgccagtgttggagttgaaattacattcccca 665 ||||||| ||||| ||||| ||||||||||| |||| |||||||| ||||| ||||| | Sbjct: 593 acaccacaatccgtgtcagaaggattattgctggtgtcggagttgagattaccttcccta 652 Query: 666 tatactcaccaaggatcaaggagatcaaagtaatcagacacaagaaggtgaggagggcaa 725 |||| ||||| ||||||||||| || ||||||||||| |||||||| ||||| || |||| Sbjct: 653 tatattcacccaggatcaaggaaattaaagtaatcaggcacaagaaagtgagaagagcaa 712 Query: 726 agttgtactacctgaagtacaagcttccccgtttctcaaccttcaagt 773 |||| || || ||||| ||||||||||||| || ||||| ||||||| Sbjct: 713 agttatattatttgaagcacaagcttccccgcttttcaactttcaagt 760
>dbj|AK104153.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-G03, full insert sequence Length = 909 Score = 309 bits (156), Expect = 1e-80 Identities = 300/348 (86%) Strand = Plus / Plus Query: 426 ttaagttcggcgagatcatcgggattctgaacaagcagttcatcgaggaggctgagaagg 485 |||||||||| |||||||| |||||||||||||| |||||||| ||||||||||| |||| Sbjct: 413 ttaagttcggggagatcattgggattctgaacaaacagttcattgaggaggctgaaaagg 472 Query: 486 tgaaagtacttccggatttgaagcccggtgacatcatcgagcttagaatgcaacgtccca 545 |||| | || ||| | | ||| ||||||||||| ||||||||||||||||| |||| Sbjct: 473 tgaagactttaccagatcttaggcctggtgacatcattgagcttagaatgcaacggccca 532 Query: 546 acaagaggagattgtctctctttaagggtataatcattgcaaagcacaaatctggtgttc 605 |||||||||||||||| ||||||||||| ||||| || ||||| |||||||||||||||| Sbjct: 533 acaagaggagattgtcgctctttaagggcataattatagcaaaacacaaatctggtgttc 592 Query: 606 acaccacgatccgcgtcaggaggattattgccagtgttggagttgaaattacattcccca 665 ||||||| ||||| ||||| ||||||||||| |||| |||||||| ||||| ||||| | Sbjct: 593 acaccacaatccgtgtcagaaggattattgctggtgtcggagttgagattaccttcccta 652 Query: 666 tatactcaccaaggatcaaggagatcaaagtaatcagacacaagaaggtgaggagggcaa 725 |||| ||||| ||||||||||| || ||||||||||| |||||||| ||||| || |||| Sbjct: 653 tatattcacccaggatcaaggaaattaaagtaatcaggcacaagaaagtgagaagagcaa 712 Query: 726 agttgtactacctgaagtacaagcttccccgtttctcaaccttcaagt 773 |||| || || ||||| ||||||||||||| || ||||| ||||||| Sbjct: 713 agttatattatttgaagcacaagcttccccgcttttcaactttcaagt 760
>dbj|AK068164.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135C05, full insert sequence Length = 1005 Score = 309 bits (156), Expect = 1e-80 Identities = 300/348 (86%) Strand = Plus / Plus Query: 426 ttaagttcggcgagatcatcgggattctgaacaagcagttcatcgaggaggctgagaagg 485 |||||||||| |||||||| |||||||||||||| |||||||| ||||||||||| |||| Sbjct: 414 ttaagttcggggagatcattgggattctgaacaaacagttcattgaggaggctgaaaagg 473 Query: 486 tgaaagtacttccggatttgaagcccggtgacatcatcgagcttagaatgcaacgtccca 545 |||| | || ||| | | ||| ||||||||||| ||||||||||||||||| |||| Sbjct: 474 tgaagactttaccagatcttaggcctggtgacatcattgagcttagaatgcaacggccca 533 Query: 546 acaagaggagattgtctctctttaagggtataatcattgcaaagcacaaatctggtgttc 605 |||||||||||||||| ||||||||||| ||||| || ||||| |||||||||||||||| Sbjct: 534 acaagaggagattgtcgctctttaagggcataattatagcaaaacacaaatctggtgttc 593 Query: 606 acaccacgatccgcgtcaggaggattattgccagtgttggagttgaaattacattcccca 665 ||||||| ||||| ||||| ||||||||||| |||| |||||||| ||||| ||||| | Sbjct: 594 acaccacaatccgtgtcagaaggattattgctggtgtcggagttgagattaccttcccta 653 Query: 666 tatactcaccaaggatcaaggagatcaaagtaatcagacacaagaaggtgaggagggcaa 725 |||| ||||| ||||||||||| || ||||||||||| |||||||| ||||| || |||| Sbjct: 654 tatattcacccaggatcaaggaaattaaagtaatcaggcacaagaaagtgagaagagcaa 713 Query: 726 agttgtactacctgaagtacaagcttccccgtttctcaaccttcaagt 773 |||| || || ||||| ||||||||||||| || ||||| ||||||| Sbjct: 714 agttatattatttgaagcacaagcttccccgcttttcaactttcaagt 761
>dbj|AK060578.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-E10, full insert sequence Length = 1278 Score = 309 bits (156), Expect = 1e-80 Identities = 300/348 (86%) Strand = Plus / Plus Query: 426 ttaagttcggcgagatcatcgggattctgaacaagcagttcatcgaggaggctgagaagg 485 |||||||||| |||||||| |||||||||||||| |||||||| ||||||||||| |||| Sbjct: 713 ttaagttcggggagatcattgggattctgaacaaacagttcattgaggaggctgaaaagg 772 Query: 486 tgaaagtacttccggatttgaagcccggtgacatcatcgagcttagaatgcaacgtccca 545 |||| | || ||| | | ||| ||||||||||| ||||||||||||||||| |||| Sbjct: 773 tgaagactttaccagatcttaggcctggtgacatcattgagcttagaatgcaacggccca 832 Query: 546 acaagaggagattgtctctctttaagggtataatcattgcaaagcacaaatctggtgttc 605 |||||||||||||||| ||||||||||| ||||| || ||||| |||||||||||||||| Sbjct: 833 acaagaggagattgtcgctctttaagggcataattatagcaaaacacaaatctggtgttc 892 Query: 606 acaccacgatccgcgtcaggaggattattgccagtgttggagttgaaattacattcccca 665 ||||||| ||||| ||||| ||||||||||| |||| |||||||| ||||| ||||| | Sbjct: 893 acaccacaatccgtgtcagaaggattattgctggtgtcggagttgagattaccttcccta 952 Query: 666 tatactcaccaaggatcaaggagatcaaagtaatcagacacaagaaggtgaggagggcaa 725 |||| ||||| ||||||||||| || ||||||||||| |||||||| ||||| || |||| Sbjct: 953 tatattcacccaggatcaaggaaattaaagtaatcaggcacaagaaagtgagaagagcaa 1012 Query: 726 agttgtactacctgaagtacaagcttccccgtttctcaaccttcaagt 773 |||| || || ||||| ||||||||||||| || ||||| ||||||| Sbjct: 1013 agttatattatttgaagcacaagcttccccgcttttcaactttcaagt 1060
>gb|AY105955.1| Zea mays PCO121693 mRNA sequence Length = 1004 Score = 305 bits (154), Expect = 2e-79 Identities = 301/350 (86%) Strand = Plus / Plus Query: 426 ttaagttcggcgagatcatcgggattctgaacaagcagttcatcgaggaggctgagaagg 485 ||||||||||||| || || ||||||||||| ||||||||||| |||||||||||||||| Sbjct: 468 ttaagttcggcgaaataattgggattctgaataagcagttcattgaggaggctgagaagg 527 Query: 486 tgaaagtacttccggatttgaagcccggtgacatcatcgagcttagaatgcaacgtccca 545 |||| | |||||| ||| ||| || || ||||| |||||||| |||||||| |||| Sbjct: 528 tgaagactgtaccggatctgaggcctggcgatatcattgagcttaggatgcaacggccca 587 Query: 546 acaagaggagattgtctctctttaagggtataatcattgcaaagcacaaatctggtgttc 605 |||| ||||||||||| ||||||||||| |||||||| |||||||||||| ||||||||| Sbjct: 588 acaaaaggagattgtcgctctttaagggcataatcatcgcaaagcacaaagctggtgttc 647 Query: 606 acaccacgatccgcgtcaggaggattattgccagtgttggagttgaaattacattcccca 665 ||||||| ||||| ||||| ||||| ||||| |||| |||||||| ||||| ||||| Sbjct: 648 acaccacaatccgtgtcagaaggatcattgctggtgtaggagttgagattaccttcccag 707 Query: 666 tatactcaccaaggatcaaggagatcaaagtaatcagacacaagaaggtgaggagggcaa 725 | |||||||| ||||||||||| |||| || ||||| |||||||| |||||||| |||| Sbjct: 708 tgtactcacccaggatcaaggaaatcacggttatcaggcacaagaaagtgaggagagcaa 767 Query: 726 agttgtactacctgaagtacaagcttccccgtttctcaaccttcaagtga 775 |||||||||||||||| ||||||||||||| || ||||| ||||||||| Sbjct: 768 agttgtactacctgaaagacaagcttccccgcttttcaacattcaagtga 817
>emb|CT829464.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN038P17, full insert sequence Length = 799 Score = 301 bits (152), Expect = 3e-78 Identities = 299/348 (85%) Strand = Plus / Plus Query: 426 ttaagttcggcgagatcatcgggattctgaacaagcagttcatcgaggaggctgagaagg 485 |||| ||||| |||||||| |||||||||||||| |||||||| ||||||||||| |||| Sbjct: 411 ttaaattcggggagatcattgggattctgaacaaacagttcattgaggaggctgaaaagg 470 Query: 486 tgaaagtacttccggatttgaagcccggtgacatcatcgagcttagaatgcaacgtccca 545 |||| | || ||| | | ||| ||||||||||| ||||||||||||||||| |||| Sbjct: 471 tgaagactttaccagatcttaggcctggtgacatcattgagcttagaatgcaacggccca 530 Query: 546 acaagaggagattgtctctctttaagggtataatcattgcaaagcacaaatctggtgttc 605 |||||||||||||||| ||||||||||| ||||| || ||||| |||||||||||||||| Sbjct: 531 acaagaggagattgtcgctctttaagggcataattatagcaaaacacaaatctggtgttc 590 Query: 606 acaccacgatccgcgtcaggaggattattgccagtgttggagttgaaattacattcccca 665 ||||||| ||||| ||||| ||||||||||| |||| |||||||| ||||| ||||| | Sbjct: 591 acaccacaatccgtgtcagaaggattattgctggtgtcggagttgagattaccttcccta 650 Query: 666 tatactcaccaaggatcaaggagatcaaagtaatcagacacaagaaggtgaggagggcaa 725 |||| ||||| ||||||||||| || ||||||||||| |||||||| ||||| || |||| Sbjct: 651 tatattcacccaggatcaaggaaattaaagtaatcaggcacaagaaagtgagaagagcaa 710 Query: 726 agttgtactacctgaagtacaagcttccccgtttctcaaccttcaagt 773 |||| || || ||||| ||||||||||||| || ||||| ||||||| Sbjct: 711 agttatattatttgaagcacaagcttccccgcttttcaactttcaagt 758
>emb|CT829463.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA018P22, full insert sequence Length = 980 Score = 301 bits (152), Expect = 3e-78 Identities = 299/348 (85%) Strand = Plus / Plus Query: 426 ttaagttcggcgagatcatcgggattctgaacaagcagttcatcgaggaggctgagaagg 485 |||| ||||| |||||||| |||||||||||||| |||||||| ||||||||||| |||| Sbjct: 412 ttaaattcggggagatcattgggattctgaacaaacagttcattgaggaggctgaaaagg 471 Query: 486 tgaaagtacttccggatttgaagcccggtgacatcatcgagcttagaatgcaacgtccca 545 |||| | || ||| | | ||| ||||||||||| ||||||||||||||||| |||| Sbjct: 472 tgaagactttaccagatcttaggcctggtgacatcattgagcttagaatgcaacggccca 531 Query: 546 acaagaggagattgtctctctttaagggtataatcattgcaaagcacaaatctggtgttc 605 |||||||||||||||| ||||||||||| ||||| || ||||| |||||||||||||||| Sbjct: 532 acaagaggagattgtcgctctttaagggcataattatagcaaaacacaaatctggtgttc 591 Query: 606 acaccacgatccgcgtcaggaggattattgccagtgttggagttgaaattacattcccca 665 ||||||| ||||| ||||| ||||||||||| |||| |||||||| ||||| ||||| | Sbjct: 592 acaccacaatccgtgtcagaaggattattgctggtgtcggagttgagattaccttcccta 651 Query: 666 tatactcaccaaggatcaaggagatcaaagtaatcagacacaagaaggtgaggagggcaa 725 |||| ||||| ||||||||||| || ||||||||||| |||||||| ||||| || |||| Sbjct: 652 tatattcacccaggatcaaggaaattaaagtaatcaggcacaagaaagtgagaagagcaa 711 Query: 726 agttgtactacctgaagtacaagcttccccgtttctcaaccttcaagt 773 |||| || || ||||| ||||||||||||| || ||||| ||||||| Sbjct: 712 agttatattatttgaagcacaagcttccccgcttttcaactttcaagt 759
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 145 bits (73), Expect = 4e-31 Identities = 115/129 (89%) Strand = Plus / Minus Query: 535 gcaacgtcccaacaagaggagattgtctctctttaagggtataatcattgcaaagcacaa 594 |||||| |||||||||||||||||||| ||||||||||| ||||| || ||||| ||||| Sbjct: 26337512 gcaacggcccaacaagaggagattgtcgctctttaagggcataattatagcaaaacacaa 26337453 Query: 595 atctggtgttcacaccacgatccgcgtcaggaggattattgccagtgttggagttgaaat 654 |||||||||||||||||| ||||| ||||| ||||||||||| |||| |||||||| || Sbjct: 26337452 atctggtgttcacaccacaatccgtgtcagaaggattattgctggtgtcggagttgagat 26337393 Query: 655 tacattccc 663 ||| ||||| Sbjct: 26337392 taccttccc 26337384 Score = 85.7 bits (43), Expect = 3e-13 Identities = 88/103 (85%) Strand = Plus / Minus Query: 671 tcaccaaggatcaaggagatcaaagtaatcagacacaagaaggtgaggagggcaaagttg 730 ||||| ||||||||||| || ||||||||||| |||||||| ||||| || |||||||| Sbjct: 26336336 tcacccaggatcaaggaaattaaagtaatcaggcacaagaaagtgagaagagcaaagtta 26336277 Query: 731 tactacctgaagtacaagcttccccgtttctcaaccttcaagt 773 || || ||||| ||||||||||||| || ||||| ||||||| Sbjct: 26336276 tattatttgaagcacaagcttccccgcttttcaactttcaagt 26336234 Score = 60.0 bits (30), Expect = 2e-05 Identities = 39/42 (92%) Strand = Plus / Minus Query: 448 gattctgaacaagcagttcatcgaggaggctgagaaggtgaa 489 |||||||||||| |||||||| ||||||||||| |||||||| Sbjct: 26337681 gattctgaacaaacagttcattgaggaggctgaaaaggtgaa 26337640
>dbj|AP002485.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:P0491E01 Length = 136150 Score = 145 bits (73), Expect = 4e-31 Identities = 115/129 (89%) Strand = Plus / Minus Query: 535 gcaacgtcccaacaagaggagattgtctctctttaagggtataatcattgcaaagcacaa 594 |||||| |||||||||||||||||||| ||||||||||| ||||| || ||||| ||||| Sbjct: 69864 gcaacggcccaacaagaggagattgtcgctctttaagggcataattatagcaaaacacaa 69805 Query: 595 atctggtgttcacaccacgatccgcgtcaggaggattattgccagtgttggagttgaaat 654 |||||||||||||||||| ||||| ||||| ||||||||||| |||| |||||||| || Sbjct: 69804 atctggtgttcacaccacaatccgtgtcagaaggattattgctggtgtcggagttgagat 69745 Query: 655 tacattccc 663 ||| ||||| Sbjct: 69744 taccttccc 69736 Score = 85.7 bits (43), Expect = 3e-13 Identities = 88/103 (85%) Strand = Plus / Minus Query: 671 tcaccaaggatcaaggagatcaaagtaatcagacacaagaaggtgaggagggcaaagttg 730 ||||| ||||||||||| || ||||||||||| |||||||| ||||| || |||||||| Sbjct: 68688 tcacccaggatcaaggaaattaaagtaatcaggcacaagaaagtgagaagagcaaagtta 68629 Query: 731 tactacctgaagtacaagcttccccgtttctcaaccttcaagt 773 || || ||||| ||||||||||||| || ||||| ||||||| Sbjct: 68628 tattatttgaagcacaagcttccccgcttttcaactttcaagt 68586 Score = 60.0 bits (30), Expect = 2e-05 Identities = 39/42 (92%) Strand = Plus / Minus Query: 448 gattctgaacaagcagttcatcgaggaggctgagaaggtgaa 489 |||||||||||| |||||||| ||||||||||| |||||||| Sbjct: 70033 gattctgaacaaacagttcattgaggaggctgaaaaggtgaa 69992
>emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2 Length = 339972 Score = 145 bits (73), Expect = 4e-31 Identities = 115/129 (89%) Strand = Plus / Minus Query: 535 gcaacgtcccaacaagaggagattgtctctctttaagggtataatcattgcaaagcacaa 594 |||||| |||||||||||||||||||| ||||||||||| ||||| || ||||| ||||| Sbjct: 60183 gcaacggcccaacaagaggagattgtcgctctttaagggcataattatagcaaaacacaa 60124 Query: 595 atctggtgttcacaccacgatccgcgtcaggaggattattgccagtgttggagttgaaat 654 |||||||||||||||||| ||||| ||||| ||||||||||| |||| |||||||| || Sbjct: 60123 atctggtgttcacaccacaatccgtgtcagaaggattattgctggtgtcggagttgagat 60064 Query: 655 tacattccc 663 ||| ||||| Sbjct: 60063 taccttccc 60055 Score = 85.7 bits (43), Expect = 3e-13 Identities = 88/103 (85%) Strand = Plus / Minus Query: 671 tcaccaaggatcaaggagatcaaagtaatcagacacaagaaggtgaggagggcaaagttg 730 ||||| ||||||||||| || ||||||||||| |||||||| ||||| || |||||||| Sbjct: 59005 tcacccaggatcaaggaaattaaagtaatcaggcacaagaaagtgagaagagcaaagtta 58946 Query: 731 tactacctgaagtacaagcttccccgtttctcaaccttcaagt 773 || || ||||| ||||||||||||| || ||||| ||||||| Sbjct: 58945 tattatttgaagcacaagcttccccgcttttcaactttcaagt 58903 Score = 60.0 bits (30), Expect = 2e-05 Identities = 39/42 (92%) Strand = Plus / Minus Query: 448 gattctgaacaagcagttcatcgaggaggctgagaaggtgaa 489 |||||||||||| |||||||| ||||||||||| |||||||| Sbjct: 60352 gattctgaacaaacagttcattgaggaggctgaaaaggtgaa 60311
>emb|AM085509.1| Hordeum vulgare mRNA for autophagy protein 9 (atg9 gene) Length = 3302 Score = 101 bits (51), Expect = 5e-18 Identities = 102/119 (85%) Strand = Plus / Minus Query: 470 gaggaggctgagaaggtgaaagtacttccggatttgaagcccggtgacatcatcgagctt 529 ||||||| ||| |||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 366 gaggaggaggaggaggtgaaagtacttccggatttgagggccggtgacatcatcgagctt 307 Query: 530 agaatgcaacgtcccaacaagaggagattgtctctctttaagggtataatcattgcaaa 588 |||||| ||| ||||||||||| ||| | |||| |||| ||| |||||||||||| Sbjct: 306 agaatggcacgggccaacaagaggggatgggctctttttaggggggaaatcattgcaaa 248
>emb|AL139409.9| Human DNA sequence from clone RP11-120D12 on chromosome 1q21.2-22 Contains the 5' end of the gene for Fc receptor-like protein 1 (FCRH1), the CD5L gene for CD5 antigen-like (scavenger receptor cysteine rich family) and a mitochondrial ribosomal protein S21 (MRPS21) pseudogene, complete sequence Length = 63633 Score = 46.1 bits (23), Expect = 0.25 Identities = 23/23 (100%) Strand = Plus / Plus Query: 667 atactcaccaaggatcaaggaga 689 ||||||||||||||||||||||| Sbjct: 35476 atactcaccaaggatcaaggaga 35498
>gb|CP000431.1| Rhodococcus sp. RHA1, complete genome Length = 7804765 Score = 44.1 bits (22), Expect = 0.98 Identities = 25/26 (96%) Strand = Plus / Plus Query: 265 cgcccacgcagacgccggcaccgcag 290 ||||||||||| |||||||||||||| Sbjct: 6665577 cgcccacgcaggcgccggcaccgcag 6665602
>ref|XM_392585.3| PREDICTED: Apis mellifera similar to FYVE-finger-containing Rab5 effector protein rabenosyn-5 (LOC409059), mRNA Length = 1533 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 887 gcataattttacatctttttc 907 ||||||||||||||||||||| Sbjct: 456 gcataattttacatctttttc 436
>gb|CP000386.1| Rubrobacter xylanophilus DSM 9941, complete genome Length = 3225748 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 290 gagccggagcccgtggccgag 310 ||||||||||||||||||||| Sbjct: 162135 gagccggagcccgtggccgag 162155
>gb|CP000113.1| Myxococcus xanthus DK 1622, complete genome Length = 9139763 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 506 aagcccggtgacatcatcgag 526 ||||||||||||||||||||| Sbjct: 2401873 aagcccggtgacatcatcgag 2401893
>gb|AC114995.7| Mus musculus chromosome 8, clone RP23-171P5, complete sequence Length = 242745 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 938 gagtgtgtttcattctgagtgtgta 962 |||||||||||||| |||||||||| Sbjct: 71875 gagtgtgtttcattatgagtgtgta 71851
>ref|XM_385229.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05053.1) partial mRNA Length = 1176 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 464 ttcatcgaggaggctgagaag 484 ||||||||||||||||||||| Sbjct: 382 ttcatcgaggaggctgagaag 402
>emb|AL135842.15| Human DNA sequence from clone RP1-91G5 on chromosome 1q21.1-21.3 Contains the 3' end of a novel gene, a novel gene, a high mobility group nucleosomal binding domain 3 (HMGN3) pseudogene, the C1orf10 gene for chromosome 1 open reading frame 10, the SPRL5A for small proline rich-like (epidermal differentiation complex) 5A and the NICE-1 gene for NICE-1 protein, complete sequence Length = 188285 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 588 agcacaaatctggtgttcaca 608 ||||||||||||||||||||| Sbjct: 29883 agcacaaatctggtgttcaca 29903
>gb|AC154373.2| Mus musculus BAC clone RP23-79I18 from chromosome 9, complete sequence Length = 225286 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 992 tggtgatgtttatgattgtgc 1012 ||||||||||||||||||||| Sbjct: 163262 tggtgatgtttatgattgtgc 163282
>gb|AC026807.4| Homo sapiens chromosome 5 clone RPCI-1_58P9, complete sequence Length = 101716 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 472 ggaggctgagaaggtgaaagt 492 ||||||||||||||||||||| Sbjct: 69084 ggaggctgagaaggtgaaagt 69064
>emb|BX842628.1| Neurospora crassa DNA linkage group I BAC clone B23L4 Length = 61971 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 982 ggtatgaacatggtgatgttt 1002 ||||||||||||||||||||| Sbjct: 46025 ggtatgaacatggtgatgttt 46005
>gb|AC158171.2| Pan troglodytes BAC clone CH251-434I6 from chromosome unknown, complete sequence Length = 184468 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 472 ggaggctgagaaggtgaaagt 492 ||||||||||||||||||||| Sbjct: 145354 ggaggctgagaaggtgaaagt 145334
>gb|AF261103.1|AF261103 Myxococcus xanthus nusA/infB operon, partial sequence; and unknown gene Length = 4674 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 506 aagcccggtgacatcatcgag 526 ||||||||||||||||||||| Sbjct: 4356 aagcccggtgacatcatcgag 4376 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 136,232,881 Number of extensions: 6956474 Number of successful extensions: 118936 Number of sequences better than 10.0: 24 Number of HSP's gapped: 118936 Number of HSP's successfully gapped: 37 Length of query: 1028 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1005 Effective length of database: 18,503,978,556 Effective search space: 18596498448780 Effective search space used: 18596498448780 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)