ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf27d02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os02g0824700:Os02g0824700 237 8e-63
2Os04g0137500:Os04g0137500 224 7e-59
3AK067183:Os03g0136900 33 0.23
4AK111883:Os12g0165000 32 0.40
5AK069363:Os09g0550500 32 0.68
6AY341855:Os01g0665500 31 1.1
7AY341844:Os01g0665500 31 1.1
8AK111013:Os01g0665500 31 1.1
9AK121940:Os03g0817200 29 3.4
10AK106916:Os08g0457000 28 5.7
11AK067826:Os07g0272900 28 5.7
12AK067591:Os10g0440000 28 7.4
13Os08g0289400:Os08g0289400 28 7.5
14AK100990:Os09g0123500 28 7.5
15Os07g0434500:Os07g0434500 28 9.8

>Os02g0824700:Os02g0824700 |
          Length = 130
 Score =  237 bits (604), Expect = 8e-63
 Identities = 118/130 (90%), Positives = 126/130 (96%)
 Frame = +3

Query: 207 MAGRSNIPANNSALIAIIADEDTVTGFLMAGVGNVDLRKKTNYLLVDNKTTVKQIEDAFK 386
           MAGR +IP N+SALIAIIADEDTVTGFL+AGVGNVDLRKKTNYL+VDNKTTVKQIEDAFK
Sbjct: 1   MAGRPSIPTNSSALIAIIADEDTVTGFLLAGVGNVDLRKKTNYLIVDNKTTVKQIEDAFK 60

Query: 387 EFTAREDIAIVLISQYIANMIRFLVDSYNKPIPAILEIPSKDHPYDPASDSVLSRVKYLF 566
           EFT REDIAIVLISQY+ANMIRFLVDSYN+P+PAILEIPSKDHPYDPA DSVLSRVKYLF
Sbjct: 61  EFTTREDIAIVLISQYVANMIRFLVDSYNRPVPAILEIPSKDHPYDPAHDSVLSRVKYLF 120

Query: 567 SADSVASDRR 596
           SA+SVASDRR
Sbjct: 121 SAESVASDRR 130



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>Os04g0137500:Os04g0137500 |
          Length = 153

 Score =  224 bits (570), Expect = 7e-59
 Identities = 118/153 (77%), Positives = 126/153 (82%), Gaps = 23/153 (15%)
 Frame = +3

Query: 207 MAGRSNIPANNSALIAIIADEDT-----------------------VTGFLMAGVGNVDL 317
           MAGR +IP N+SALIAIIADEDT                       VTGFL+AGVGNVDL
Sbjct: 1   MAGRPSIPTNSSALIAIIADEDTYPILLSLLMIQRIVVMPESGSDTVTGFLLAGVGNVDL 60

Query: 318 RKKTNYLLVDNKTTVKQIEDAFKEFTAREDIAIVLISQYIANMIRFLVDSYNKPIPAILE 497
           RKKTNYL+VDNKTTVKQIEDAFKEFT REDIAIVLISQY+ANMIRFLVDSYN+P+PAILE
Sbjct: 61  RKKTNYLIVDNKTTVKQIEDAFKEFTTREDIAIVLISQYVANMIRFLVDSYNRPVPAILE 120

Query: 498 IPSKDHPYDPASDSVLSRVKYLFSADSVASDRR 596
           IPSKDHPYDPA DSVLSRVKYLFSA+SVASDRR
Sbjct: 121 IPSKDHPYDPAHDSVLSRVKYLFSAESVASDRR 153



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>AK067183:Os03g0136900 |
          Length = 986

 Score = 33.1 bits (74), Expect = 0.23
 Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 6/117 (5%)
 Frame = +3

Query: 201 AVMAGRSNIPANNSALIAI--IADEDTVTGFLMAGVGNVDLRKKTNYLLVDNKTTVKQIE 374
           AV++G  N      AL     +A    V  + +AG  N+D  K+   +  D K      E
Sbjct: 622 AVLSGNRNFEGRVHALTRANYLASPPLVVAYALAGTVNIDFEKEPIGISKDGK------E 675

Query: 375 DAFKE-FTAREDIAIVLISQYIANMIRFLVDSYNKPIPAILEI---PSKDHPYDPAS 533
             F++ + + E+IA V+ S  + +M +   ++  K  P   E+    S  +P+DP S
Sbjct: 676 VYFRDIWPSTEEIAEVVKSSVLPDMFKSTYEAITKGNPMWNELSVSASTLYPWDPTS 732



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>AK111883:Os12g0165000 |
          Length = 752

 Score = 32.3 bits (72), Expect = 0.40
 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
 Frame = +1

Query: 376 MHLKNLLQGRILLLCSSAN-ILQT*L--DFWWIATTSQSLRYWKSHPRTIHMIQQVIRSF 546
           ++L +L     +LLC++ + ILQ  L  D  W+ATT  S+  WK+       + Q   SF
Sbjct: 321 VYLTDLSNRESVLLCTNEHPILQLSLQDDMIWVATTDSSVNGWKAEAHEPLKLFQKGSSF 380

Query: 547 LV*SIYFLLTRLLLIG 594
           L  ++ F   R  L G
Sbjct: 381 LAGNLSFSRARASLEG 396



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>AK069363:Os09g0550500 |
          Length = 75

 Score = 31.6 bits (70), Expect = 0.68
 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = -2

Query: 627 MPLLSTRLLL--NAYQKQPSQQKIDTSHEKGPNHLLDHMDGPWMGFPISQGLACC 469
           +P+L  +LL   N  Q QP+ Q  D S +K    + D      +GFP   GL CC
Sbjct: 3   LPVLCEKLLWCWNRNQNQPTWQMDDLSGQKRICVIRDVCGHHRLGFPSGSGLLCC 57



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>AY341855:Os01g0665500 |
          Length = 580

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
 Frame = -3

Query: 173 SCSRYESRNHRHGSRRKKERVGDPVVQEKKNME---AKRRVRRGLGAGE 36
           +C R  ++NH HG RR++  V DP +  +   +   A    R G GAGE
Sbjct: 172 ACVRARAKNHEHGQRRREAAV-DPAMSGEYQFQDELAPLFARPGGGAGE 219



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>AY341844:Os01g0665500 |
          Length = 565

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
 Frame = -3

Query: 173 SCSRYESRNHRHGSRRKKERVGDPVVQEKKNME---AKRRVRRGLGAGE 36
           +C R  ++NH HG RR++  V DP +  +   +   A    R G GAGE
Sbjct: 157 ACVRARAKNHEHGQRRREAAV-DPAMSGEYQFQDELAPLFARPGGGAGE 204



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>AK111013:Os01g0665500 |
          Length = 163

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
 Frame = -3

Query: 173 SCSRYESRNHRHGSRRKKERVGDPVVQEKKNME---AKRRVRRGLGAGE 36
           +C R  ++NH HG RR++  V DP +  +   +   A    R G GAGE
Sbjct: 15  ACVRARAKNHEHGQRRREAAV-DPAMSGEYQFQDELAPLFARPGGGAGE 62



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>AK121940:Os03g0817200 |
          Length = 418

 Score = 29.3 bits (64), Expect = 3.4
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = +2

Query: 494 GNPIQGPSI*SSK*FGPFSCEVSIFC*LG-CF**ALSSNLVDNR 622
           G+P QG S  +     PF+C V++FC  G C   AL +++ D R
Sbjct: 202 GSPFQGRSALAGLWGVPFACGVAVFCFEGFCLTLALEASMSDRR 245



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>AK106916:Os08g0457000 |
          Length = 78

 Score = 28.5 bits (62), Expect = 5.7
 Identities = 16/43 (37%), Positives = 19/43 (44%)
 Frame = -2

Query: 597 NAYQKQPSQQKIDTSHEKGPNHLLDHMDGPWMGFPISQGLACC 469
           N  Q QP  Q  D S +K    + D      +GFP   GL CC
Sbjct: 15  NRNQNQPMWQMDDLSGQKRIYVIRDVCGHHRLGFPSGSGLLCC 57



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>AK067826:Os07g0272900 |
          Length = 240

 Score = 28.5 bits (62), Expect = 5.7
 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
 Frame = -1

Query: 589 SEATE-----SAENRYFTRERTESLAGSYGWSLDGISNIAGIGLL*LSTRNLIMF 440
           SEAT      S E R   RER  +L GS GW +D I ++  + L  +    L+ F
Sbjct: 174 SEATPPHRRASLEERRGEREREMALCGSVGW-MDKIKDVVWMALWVVKKAGLVFF 227



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>AK067591:Os10g0440000 |
          Length = 519

 Score = 28.1 bits (61), Expect = 7.4
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = -3

Query: 134 SRRKKERVGDPVVQEKKNMEAKRRVRRGLGAGEPEE 27
           SR+K ER+ + ++QE+K ++ +     G GAG  +E
Sbjct: 244 SRKKMERILEQIIQERKQIKER---STGAGAGADDE 276



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>Os08g0289400:Os08g0289400 |
          Length = 611

 Score = 28.1 bits (61), Expect = 7.5
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = -1

Query: 745 PAGPIQIIYSLFVRPQQNGMNNLIQIHGAGSPQITRSKRDAPVINKVATQ 596
           P+GP     +  V   ++ +N  + + G  S QI    ++AP+IN+   Q
Sbjct: 38  PSGPTSPYTTWIVSSTKDQVNGTLHVDGVQSTQIVPYGQNAPLINQFPLQ 87



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>AK100990:Os09g0123500 |
          Length = 428

 Score = 28.1 bits (61), Expect = 7.5
 Identities = 17/57 (29%), Positives = 25/57 (43%)
 Frame = -2

Query: 642 LDQSVMPLLSTRLLLNAYQKQPSQQKIDTSHEKGPNHLLDHMDGPWMGFPISQGLAC 472
           +D  +  +  T LL  A   Q S  KI   H   PN +++H   P +   +S  L C
Sbjct: 137 VDVDLDSITGTPLLTAAMNGQYSTMKILLEHHADPNRVVNHNGTPLIMSIVSGSLEC 193



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>Os07g0434500:Os07g0434500 |
          Length = 1223

 Score = 27.7 bits (60), Expect = 9.8
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = -1

Query: 745 PAGPIQIIYSLFVRPQQNGMNNLIQIHGAGSPQITRSKRDAPVINKVATQ 596
           P+GP     +  V   ++ +N  + + G  S QI    ++AP+IN+   Q
Sbjct: 390 PSGPTSPCTTWIVSSAKDQVNGTLHVDGVQSTQIVPYGQNAPLINQSPLQ 439


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 24,289,449
Number of extensions: 570811
Number of successful extensions: 1536
Number of sequences better than 10.0: 15
Number of HSP's gapped: 1534
Number of HSP's successfully gapped: 15
Length of query: 269
Length of database: 15,399,855
Length adjustment: 99
Effective length of query: 170
Effective length of database: 11,435,796
Effective search space: 1944085320
Effective search space used: 1944085320
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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