| Clone Name | FLbaf27d02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DQ245573.1| Zea mays clone 17721 mRNA sequence Length = 676 Score = 351 bits (177), Expect = 2e-93 Identities = 336/389 (86%) Strand = Plus / Plus Query: 207 atggcggggaggtccaatatcccggcgaacaactccgcgctcatcgccatcatcgctgat 266 |||||||||||| |||| ||||| | ||||||||||| |||||||| |||||||| || Sbjct: 117 atggcggggaggaccaacatccccactaacaactccgccctcatcgcaatcatcgccgac 176 Query: 267 gaggacactgttactgggtttttgatggctggggttggcaatgttgatctgcgcaagaaa 326 |||||||| || ||||| || |||||||| || ||||||||||||||||||||||||||| Sbjct: 177 gaggacaccgtcactggcttcttgatggccggcgttggcaatgttgatctgcgcaagaaa 236 Query: 327 acaaattaccttcttgtggataacaaaaccacagtgaaacagattgaagatgcatttaaa 386 || |||||||| || || || ||||| || ||||| ||||| || || || || || ||| Sbjct: 237 accaattacctcctcgtcgacaacaagacgacagttaaacaaatcgaggacgcgttcaaa 296 Query: 387 gaatttactgcaagggaggatattgctattgtgctcatcagccaatatattgcaaacatg 446 ||||||||| ||||||||||||||||||||||||||||||| || |||||||| |||||| Sbjct: 297 gaatttactacaagggaggatattgctattgtgctcatcagtcagtatattgccaacatg 356 Query: 447 attagatttctggtggatagctacaacaagccaatccctgcgatattggaaatcccatcc 506 || |||||||||||||||||||||||||||||| ||||||| || |||| ||||||||| Sbjct: 357 ataagatttctggtggatagctacaacaagccagtccctgctattctggagatcccatcc 416 Query: 507 aaggaccatccatatgatccagcaagtgattcggtcctttctcgtgtgaagtatctattt 566 ||||||||||||||||||||||| || ||||| || ||||| ||||||||||| || Sbjct: 417 aaggaccatccatatgatccagcgcacgactcggtgctgtctcgagtgaagtatctcttc 476 Query: 567 tctgctgactcggttgcttctgataggcg 595 ||||| || ||||| || ||||||||||| Sbjct: 477 tctgcggaatcggtggcgtctgataggcg 505
>gb|DQ245362.1| Zea mays clone 14761 mRNA sequence Length = 711 Score = 343 bits (173), Expect = 6e-91 Identities = 335/389 (86%) Strand = Plus / Plus Query: 207 atggcggggaggtccaatatcccggcgaacaactccgcgctcatcgccatcatcgctgat 266 |||||||||||| | || ||||| | ||||||||| | |||||||| |||||||| || Sbjct: 133 atggcggggaggactaacatccccactaacaactcctccctcatcgcaatcatcgccgac 192 Query: 267 gaggacactgttactgggtttttgatggctggggttggcaatgttgatctgcgcaagaaa 326 |||||||| || ||||| || |||||||| || ||||||||||||||||||||||||||| Sbjct: 193 gaggacaccgtcactggcttcttgatggccggcgttggcaatgttgatctgcgcaagaaa 252 Query: 327 acaaattaccttcttgtggataacaaaaccacagtgaaacagattgaagatgcatttaaa 386 || |||||||| || || || ||||| || ||||| ||||| || || || || || ||| Sbjct: 253 accaattacctcctcgtcgacaacaagacgacagttaaacaaatcgaggacgcgttcaaa 312 Query: 387 gaatttactgcaagggaggatattgctattgtgctcatcagccaatatattgcaaacatg 446 ||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||| Sbjct: 313 gaatttactgcaagggaggatattgctattgtgctcatcagtcagtatattgccaacatg 372 Query: 447 attagatttctggtggatagctacaacaagccaatccctgcgatattggaaatcccatcc 506 || |||||||||||||||||||||||||||||| ||||||| || |||| ||||||||| Sbjct: 373 ataagatttctggtggatagctacaacaagccagtccctgctattctggagatcccatcc 432 Query: 507 aaggaccatccatatgatccagcaagtgattcggtcctttctcgtgtgaagtatctattt 566 ||||||||||||||||||||||| || ||||| || ||||| ||||||||||| || Sbjct: 433 aaggaccatccatatgatccagcgcacgactcggtgctgtctcgagtgaagtatctcttc 492 Query: 567 tctgctgactcggttgcttctgataggcg 595 ||||| || ||||| || ||||||||||| Sbjct: 493 tctgcggaatcggtggcgtctgataggcg 521
>dbj|AK240995.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065052N02, full insert sequence Length = 739 Score = 335 bits (169), Expect = 1e-88 Identities = 334/389 (85%) Strand = Plus / Plus Query: 207 atggcggggaggtccaatatcccggcgaacaactccgcgctcatcgccatcatcgctgat 266 |||||||||||| ||| |||||| | |||| |||||| ||||||||||||||||| || Sbjct: 129 atggcggggaggcccagcatcccgaccaacagctccgctctcatcgccatcatcgccgac 188 Query: 267 gaggacactgttactgggtttttgatggctggggttggcaatgttgatctgcgcaagaaa 326 |||||||| || |||||||||||| ||||||| |||||||||||||||||| | || || Sbjct: 189 gaggacacggtcactgggtttttgttggctggagttggcaatgttgatctgaggaaaaag 248 Query: 327 acaaattaccttcttgtggataacaaaaccacagtgaaacagattgaagatgcatttaaa 386 |||||||||||| |||| ||||||||||| ||||| ||||| || |||||||||||||| Sbjct: 249 acaaattaccttattgttgataacaaaacaacagtcaaacaaatcgaagatgcatttaag 308 Query: 387 gaatttactgcaagggaggatattgctattgtgctcatcagccaatatattgcaaacatg 446 ||||| ||| |||||||||| ||||| ||||| ||||||||||||||| |||| |||||| Sbjct: 309 gaattcactacaagggaggacattgcaattgttctcatcagccaatatgttgcgaacatg 368 Query: 447 attagatttctggtggatagctacaacaagccaatccctgcgatattggaaatcccatcc 506 || || || ||||||||||||||||||| ||| | ||||| |||||||| ||||||||| Sbjct: 369 ataaggttcctggtggatagctacaacaggcccgttcctgctatattggagatcccatcc 428 Query: 507 aaggaccatccatatgatccagcaagtgattcggtcctttctcgtgtgaagtatctattt 566 ||||| ||||| ||||| |||||| ||||| || |||||||| |||||||| || ||| Sbjct: 429 aaggatcatccgtatgacccagcacacgattctgttctttctcgcgtgaagtacctgttt 488 Query: 567 tctgctgactcggttgcttctgataggcg 595 |||||||| ||||| || || |||||||| Sbjct: 489 tctgctgaatcggtggcatcagataggcg 517
>ref|NM_001055112.1| Oryza sativa (japonica cultivar-group) Os02g0824700 (Os02g0824700) mRNA, complete cds Length = 393 Score = 335 bits (169), Expect = 1e-88 Identities = 334/389 (85%) Strand = Plus / Plus Query: 207 atggcggggaggtccaatatcccggcgaacaactccgcgctcatcgccatcatcgctgat 266 |||||||||||| ||| |||||| | |||| |||||| ||||||||||||||||| || Sbjct: 1 atggcggggaggcccagcatcccgaccaacagctccgctctcatcgccatcatcgccgac 60 Query: 267 gaggacactgttactgggtttttgatggctggggttggcaatgttgatctgcgcaagaaa 326 |||||||| || |||||||||||| ||||||| |||||||||||||||||| | || || Sbjct: 61 gaggacacggtcactgggtttttgttggctggagttggcaatgttgatctgaggaaaaag 120 Query: 327 acaaattaccttcttgtggataacaaaaccacagtgaaacagattgaagatgcatttaaa 386 |||||||||||| |||| ||||||||||| ||||| ||||| || |||||||||||||| Sbjct: 121 acaaattaccttattgttgataacaaaacaacagtcaaacaaatcgaagatgcatttaag 180 Query: 387 gaatttactgcaagggaggatattgctattgtgctcatcagccaatatattgcaaacatg 446 ||||| ||| |||||||||| ||||| ||||| ||||||||||||||| |||| |||||| Sbjct: 181 gaattcactacaagggaggacattgcaattgttctcatcagccaatatgttgcgaacatg 240 Query: 447 attagatttctggtggatagctacaacaagccaatccctgcgatattggaaatcccatcc 506 || || || ||||||||||||||||||| ||| | ||||| |||||||| ||||||||| Sbjct: 241 ataaggttcctggtggatagctacaacaggcccgttcctgctatattggagatcccatcc 300 Query: 507 aaggaccatccatatgatccagcaagtgattcggtcctttctcgtgtgaagtatctattt 566 ||||| ||||| ||||| |||||| ||||| || |||||||| |||||||| || ||| Sbjct: 301 aaggatcatccgtatgacccagcacacgattctgttctttctcgcgtgaagtacctgttt 360 Query: 567 tctgctgactcggttgcttctgataggcg 595 |||||||| ||||| || || |||||||| Sbjct: 361 tctgctgaatcggtggcatcagataggcg 389
>emb|CT835057.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA056D15, full insert sequence Length = 681 Score = 313 bits (158), Expect = 5e-82 Identities = 335/394 (85%) Strand = Plus / Plus Query: 207 atggcggggaggtccaatatcccggcgaacaactccgcgctcatcgccatcatcgctgat 266 |||||||||||| ||| |||||| | |||| ||| |||||||||||||||||||| || Sbjct: 129 atggcggggaggcccagcatcccgaccaacagctctgcgctcatcgccatcatcgccgac 188 Query: 267 gaggacactgttactgggtttttgatggctggggttggcaatgttgatctgcgcaagaaa 326 |||||||| || |||||||||||| ||||||| |||||||||||||||||| | || || Sbjct: 189 gaggacacggtgactgggtttttgttggctggagttggcaatgttgatctgaggaaaaag 248 Query: 327 acaaattaccttcttgtggataacaaaaccacagtgaaacagattgaagatgcatttaaa 386 |||||||| ||| |||| ||||||||||| ||||| ||||| ||||||||||| ||||| Sbjct: 249 acaaattatcttattgttgataacaaaacaacagtcaaacaaattgaagatgcgtttaag 308 Query: 387 gaatttactgcaagggaggatattgctattgtgctcatcagccaatatattgcaaacatg 446 || || ||| |||||||||| ||||| ||||| |||||||| |||||| ||||||||||| Sbjct: 309 gagttcactacaagggaggacattgcaattgtactcatcagtcaatatgttgcaaacatg 368 Query: 447 attagatttctggtggatagctacaacaagccaatccctgcgatattggaaatcccatcc 506 ||||||||||| |||||||||||||||| || | ||||| |||||||| || ||||| Sbjct: 369 attagatttcttgtggatagctacaacagaccggttcctgctatattggagattccatcg 428 Query: 507 aaggaccatccatatgatccagcaagtgattcggtcctttctcgtgtgaagtatctattt 566 ||||| ||||| ||||| |||||| ||||| ||||||||||| |||||||| |||||| Sbjct: 429 aaggatcatccttatgacccagcacacgattctgtcctttctcgcgtgaagtacctattt 488 Query: 567 tctgctgactcggttgcttctgataggcgttgag 600 || ||||| || || || || |||||||| |||| Sbjct: 489 tccgctgaatcagtggcgtcagataggcgatgag 522
>dbj|AK242676.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J090031H21, full insert sequence Length = 4320 Score = 313 bits (158), Expect = 5e-82 Identities = 335/394 (85%) Strand = Plus / Plus Query: 207 atggcggggaggtccaatatcccggcgaacaactccgcgctcatcgccatcatcgctgat 266 |||||||||||| ||| |||||| | |||| ||| |||||||||||||||||||| || Sbjct: 133 atggcggggaggcccagcatcccgaccaacagctctgcgctcatcgccatcatcgccgac 192 Query: 267 gaggacactgttactgggtttttgatggctggggttggcaatgttgatctgcgcaagaaa 326 |||||||| || |||||||||||| ||||||| |||||||||||||||||| | || || Sbjct: 193 gaggacacggtgactgggtttttgttggctggagttggcaatgttgatctgaggaaaaag 252 Query: 327 acaaattaccttcttgtggataacaaaaccacagtgaaacagattgaagatgcatttaaa 386 |||||||| ||| |||| ||||||||||| ||||| ||||| ||||||||||| ||||| Sbjct: 253 acaaattatcttattgttgataacaaaacaacagtcaaacaaattgaagatgcgtttaag 312 Query: 387 gaatttactgcaagggaggatattgctattgtgctcatcagccaatatattgcaaacatg 446 || || ||| |||||||||| ||||| ||||| |||||||| |||||| ||||||||||| Sbjct: 313 gagttcactacaagggaggacattgcaattgtactcatcagtcaatatgttgcaaacatg 372 Query: 447 attagatttctggtggatagctacaacaagccaatccctgcgatattggaaatcccatcc 506 ||||||||||| |||||||||||||||| || | ||||| |||||||| || ||||| Sbjct: 373 attagatttcttgtggatagctacaacagaccggttcctgctatattggagattccatcg 432 Query: 507 aaggaccatccatatgatccagcaagtgattcggtcctttctcgtgtgaagtatctattt 566 ||||| ||||| ||||| |||||| ||||| ||||||||||| |||||||| |||||| Sbjct: 433 aaggatcatccttatgacccagcacacgattctgtcctttctcgcgtgaagtacctattt 492 Query: 567 tctgctgactcggttgcttctgataggcgttgag 600 || ||||| || || || || |||||||| |||| Sbjct: 493 tccgctgaatcagtggcgtcagataggcgatgag 526
>gb|AY103927.1| Zea mays PCO061369 mRNA sequence Length = 866 Score = 311 bits (157), Expect = 2e-81 Identities = 331/389 (85%) Strand = Plus / Plus Query: 207 atggcggggaggtccaatatcccggcgaacaactccgcgctcatcgccatcatcgctgat 266 |||||||||||| |||| ||||| | ||||||||||| |||||||| |||||||| || Sbjct: 206 atggcggggagggccaacatccccactaacaactccgccctcatcgcaatcatcgccgac 265 Query: 267 gaggacactgttactgggtttttgatggctggggttggcaatgttgatctgcgcaagaaa 326 |||||||| || ||||| || |||||||| || ||||||||||||||||||||||||||| Sbjct: 266 gaggacaccgtcactggcttcttgatggccggcgttggcaatgttgatctgcgcaagaaa 325 Query: 327 acaaattaccttcttgtggataacaaaaccacagtgaaacagattgaagatgcatttaaa 386 || || ||||| || || || ||||| || ||||| ||||| || || ||||| || ||| Sbjct: 326 accaactacctcctcgtcgacaacaagacgacagttaaacaaatcgaggatgcgttcaaa 385 Query: 387 gaatttactgcaagggaggatattgctattgtgctcatcagccaatatattgcaaacatg 446 ||||||||| | ||||||||||||||||||||||||||||| || |||||||| |||||| Sbjct: 386 gaatttactacgagggaggatattgctattgtgctcatcagtcagtatattgccaacatg 445 Query: 447 attagatttctggtggatagctacaacaagccaatccctgcgatattggaaatcccatcc 506 || || |||||||||||||||||||||||||| ||||||| || |||| ||||||||| Sbjct: 446 ataaggtttctggtggatagctacaacaagcccgtccctgctattctggagatcccatcc 505 Query: 507 aaggaccatccatatgatccagcaagtgattcggtcctttctcgtgtgaagtatctattt 566 ||||||||||||||||||||||| || || || || ||||| ||||| ||||| || Sbjct: 506 aaggaccatccatatgatccagcgcacgactctgtgctctctcgagtgaaatatctgttc 565 Query: 567 tctgctgactcggttgcttctgataggcg 595 ||||| || ||||| || ||||||||||| Sbjct: 566 tctgcagaatcggtggcgtctgataggcg 594
>gb|DQ245610.1| Zea mays clone 18227 mRNA sequence Length = 610 Score = 272 bits (137), Expect = 2e-69 Identities = 281/329 (85%) Strand = Plus / Plus Query: 267 gaggacactgttactgggtttttgatggctggggttggcaatgttgatctgcgcaagaaa 326 |||||||| || ||||| || |||||||| || ||||||||||||||||||||||||||| Sbjct: 38 gaggacaccgtcactggcttcttgatggccggcgttggcaatgttgatctgcgcaagaaa 97 Query: 327 acaaattaccttcttgtggataacaaaaccacagtgaaacagattgaagatgcatttaaa 386 || || ||||| || || || ||||| || ||||| ||||| || || ||||| || ||| Sbjct: 98 accaactacctcctcgtcgacaacaagacgacagttaaacaaatcgaggatgcgttcaaa 157 Query: 387 gaatttactgcaagggaggatattgctattgtgctcatcagccaatatattgcaaacatg 446 ||||||||| | ||||||||||||||||||||||||||||| || |||||||| |||||| Sbjct: 158 gaatttactacgagggaggatattgctattgtgctcatcagtcagtatattgccaacatg 217 Query: 447 attagatttctggtggatagctacaacaagccaatccctgcgatattggaaatcccatcc 506 || || |||||||||||||||||||||||||| ||||||| || |||| ||||||||| Sbjct: 218 ataaggtttctggtggatagctacaacaagcccgtccctgctattctggagatcccatcc 277 Query: 507 aaggaccatccatatgatccagcaagtgattcggtcctttctcgtgtgaagtatctattt 566 ||||||||||||||||||||||| || ||||| || ||||| ||||| ||||| || Sbjct: 278 aaggaccatccatatgatccagcgcacgactcggtgctctctcgagtgaaatatctgttc 337 Query: 567 tctgctgactcggttgcttctgataggcg 595 ||||| || ||||| || ||||||||||| Sbjct: 338 tctgcagaatcggtggcgtctgataggcg 366
>ref|NM_001058639.1| Oryza sativa (japonica cultivar-group) Os04g0137500 (Os04g0137500) mRNA, complete cds Length = 462 Score = 258 bits (130), Expect = 3e-65 Identities = 277/326 (84%) Strand = Plus / Plus Query: 270 gacactgttactgggtttttgatggctggggttggcaatgttgatctgcgcaagaaaaca 329 ||||| || |||||||||||| ||||||| |||||||||||||||||| | || || ||| Sbjct: 133 gacacggtgactgggtttttgttggctggagttggcaatgttgatctgaggaaaaagaca 192 Query: 330 aattaccttcttgtggataacaaaaccacagtgaaacagattgaagatgcatttaaagaa 389 ||||| ||| |||| ||||||||||| ||||| ||||| ||||||||||| ||||| || Sbjct: 193 aattatcttattgttgataacaaaacaacagtcaaacaaattgaagatgcgtttaaggag 252 Query: 390 tttactgcaagggaggatattgctattgtgctcatcagccaatatattgcaaacatgatt 449 || ||| |||||||||| ||||| ||||| |||||||| |||||| |||||||||||||| Sbjct: 253 ttcactacaagggaggacattgcaattgtactcatcagtcaatatgttgcaaacatgatt 312 Query: 450 agatttctggtggatagctacaacaagccaatccctgcgatattggaaatcccatccaag 509 |||||||| |||||||||||||||| || | ||||| |||||||| || ||||| ||| Sbjct: 313 agatttcttgtggatagctacaacagaccggttcctgctatattggagattccatcgaag 372 Query: 510 gaccatccatatgatccagcaagtgattcggtcctttctcgtgtgaagtatctattttct 569 || ||||| ||||| |||||| ||||| ||||||||||| |||||||| |||||||| Sbjct: 373 gatcatccttatgacccagcacacgattctgtcctttctcgcgtgaagtacctattttcc 432 Query: 570 gctgactcggttgcttctgataggcg 595 ||||| || || || || |||||||| Sbjct: 433 gctgaatcagtggcgtcagataggcg 458 Score = 58.0 bits (29), Expect = 5e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 207 atggcggggaggtccaatatcccggcgaacaactccgcgctcatcgccatcatcgctgat 266 |||||||||||| ||| |||||| | |||| ||| |||||||||||||||||||| || Sbjct: 1 atggcggggaggcccagcatcccgaccaacagctctgcgctcatcgccatcatcgccgac 60 Query: 267 gagga 271 ||||| Sbjct: 61 gagga 65
>gb|BT012798.1| Lycopersicon esculentum clone 113812R, mRNA sequence Length = 772 Score = 200 bits (101), Expect = 6e-48 Identities = 272/329 (82%) Strand = Plus / Plus Query: 234 aacaactccgcgctcatcgccatcatcgctgatgaggacactgttactgggtttttgatg 293 |||||||| || ||||| ||||| ||||||||||||||||| ||||||| ||||| || Sbjct: 138 aacaactcagccctcattgccatgatcgctgatgaggacacaattactggatttttactg 197 Query: 294 gctggggttggcaatgttgatctgcgcaagaaaacaaattaccttcttgtggataacaaa 353 ||||| ||||||||||||||| || | | |||||||||||||||| |||||||| ||| Sbjct: 198 gctggagttggcaatgttgatttgaggaggaaaacaaattaccttattgtggattcaaaa 257 Query: 354 accacagtgaaacagattgaagatgcatttaaagaatttactgcaagggaggatattgct 413 || |||||||| |||||||||||||| ||||| ||||| || |||| ||||| || || Sbjct: 258 acaacagtgaagcagattgaagatgcttttaaggaattcaccacaagagaggacatcgca 317 Query: 414 attgtgctcatcagccaatatattgcaaacatgattagatttctggtggatagctacaac 473 || ||| | |||||||||||| | || |||||||| |||||| |||| ||||| |||||| Sbjct: 318 atagtgttgatcagccaatatgtggccaacatgataagatttttggttgatagttacaac 377 Query: 474 aagccaatccctgcgatattggaaatcccatccaaggaccatccatatgatccagcaagt 533 || ||||| || || || ||||| || || || |||||||||||||||||||| || | Sbjct: 378 aaaccaattccagccattttggagattccttcaaaggaccatccatatgatcctgcccat 437 Query: 534 gattcggtcctttctcgtgtgaagtatct 562 ||||| || || || || ||||||||||| Sbjct: 438 gattctgttctatcacgagtgaagtatct 466
>emb|CT835496.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN073N23, full insert sequence Length = 327 Score = 196 bits (99), Expect = 9e-47 Identities = 192/223 (86%) Strand = Plus / Plus Query: 207 atggcggggaggtccaatatcccggcgaacaactccgcgctcatcgccatcatcgctgat 266 ||||||||||| ||| |||||| | |||| |||||| || |||||||||||||| || Sbjct: 105 atggcggggagacccagcatcccgaccaacagctccgctctaatcgccatcatcgccgac 164 Query: 267 gaggacactgttactgggtttttgatggctggggttggcaatgttgatctgcgcaagaaa 326 |||||||| || |||||||||||| ||||||| |||||||||||||||||| | || || Sbjct: 165 gaggacacggtcactgggtttttgttggctggagttggcaatgttgatctgaggaaaaag 224 Query: 327 acaaattaccttcttgtggataacaaaaccacagtgaaacagattgaagatgcatttaaa 386 |||||||||||| |||| ||||||||||| ||||| ||||| || |||||||||||||| Sbjct: 225 acaaattaccttattgttgataacaaaacaacagtcaaacaaatcgaagatgcatttaag 284 Query: 387 gaatttactgcaagggaggatattgctattgtgctcatcagcc 429 ||||| ||| |||||||||| ||||| ||||| |||||||||| Sbjct: 285 gaattcactacaagggaggacattgcaattgttctcatcagcc 327
>gb|DQ317309.1| Musa acuminata putative vacuolar ATP synthase subunit F mRNA, partial cds Length = 386 Score = 182 bits (92), Expect = 1e-42 Identities = 242/292 (82%) Strand = Plus / Plus Query: 264 gatgaggacactgttactgggtttttgatggctggggttggcaatgttgatctgcgcaag 323 |||||||||||||||||||| |||||||||||||| |||||| |||||||||| || | Sbjct: 91 gatgaggacactgttactggatttttgatggctggagttggcgatgttgatctacggaga 150 Query: 324 aaaacaaattaccttcttgtggataacaaaaccacagtgaaacagattgaagatgcattt 383 || |||||||||||| ||||||| ||||| || |||||| || |||||||||| Sbjct: 151 aagacaaattaccttattgtggactcaaaaactactgtgaaagctataaaagatgcattc 210 Query: 384 aaagaatttactgcaagggaggatattgctattgtgctcatcagccaatatattgcaaac 443 ||||| || || ||||||||||||||||| ||||||| || | |||||||||||||||| Sbjct: 211 aaagagttcacctcaagggaggatattgctgttgtgctgattatccaatatattgcaaac 270 Query: 444 atgattagatttctggtggatagctacaacaagccaatccctgcgatattggaaatccca 503 ||||| | ||||||||||||||||||||||| || | || || || ||||| || || Sbjct: 271 atgatacggtttctggtggatagctacaacaaacctgtgccagctatcttggagattccc 330 Query: 504 tccaaggaccatccatatgatccagcaagtgattcggtcctttctcgtgtga 555 |||||||| ||||||||||| || ||| |||||||| |||||||| |||| Sbjct: 331 tccaaggatcatccatatgaccctgcacacgattcggttctttctcgagtga 382
>ref|NM_116496.3| Arabidopsis thaliana hydrogen-transporting ATP synthase, rotational mechanism / hydrogen-transporting ATPase, rotational mechanism (AT4G02620) mRNA, complete cds Length = 636 Score = 127 bits (64), Expect = 7e-26 Identities = 268/336 (79%) Strand = Plus / Plus Query: 236 caactccgcgctcatcgccatcatcgctgatgaggacactgttactgggtttttgatggc 295 |||||| || |||||||| || ||||| ||||||||||||||| ||| ||||||||||| Sbjct: 108 caactctgccctcatcgcaatgatcgccgatgaggacactgttgttggatttttgatggc 167 Query: 296 tggggttggcaatgttgatctgcgcaagaaaacaaattaccttcttgtggataacaaaac 355 ||| ||||| |||||||| | | | ||| ||||||||||| | |||||| || || Sbjct: 168 tggagttggtaatgttgacataaggaggaagacaaattacctcatcgtggattcaaagac 227 Query: 356 cacagtgaaacagattgaagatgcatttaaagaatttactgcaagggaggatattgctat 415 || |||| ||| ||||| ||||| || || ||||| | |||||||| ||||| ||||| Sbjct: 228 aactgtgagacaaattgaggatgctttcaaggaattctcagcaagggatgatatcgctat 287 Query: 416 tgtgctcatcagccaatatattgcaaacatgattagatttctggtggatagctacaacaa 475 | || | ||||||||||| || || ||||| | || ||||||||||||||||||| Sbjct: 288 cattcttttaagccaatatatcgccaatatgatccggttcttggtggatagctacaacaa 347 Query: 476 gccaatccctgcgatattggaaatcccatccaaggaccatccatatgatccagcaagtga 535 |||| | ||||| || ||||| ||||| |||||||||||||| |||||||| || ||| Sbjct: 348 gccagttcctgcaatcttggagatcccttccaaggaccatccctatgatcctgctcatga 407 Query: 536 ttcggtcctttctcgtgtgaagtatctattttctgc 571 ||| || || |||||||| ||||| || |||||||| Sbjct: 408 ttcagttctctctcgtgtcaagtacctcttttctgc 443
>gb|AY117236.1| Arabidopsis thaliana putative vacuolar ATPase (At4g02620) mRNA, complete cds Length = 418 Score = 127 bits (64), Expect = 7e-26 Identities = 268/336 (79%) Strand = Plus / Plus Query: 236 caactccgcgctcatcgccatcatcgctgatgaggacactgttactgggtttttgatggc 295 |||||| || |||||||| || ||||| ||||||||||||||| ||| ||||||||||| Sbjct: 30 caactctgccctcatcgcaatgatcgccgatgaggacactgttgttggatttttgatggc 89 Query: 296 tggggttggcaatgttgatctgcgcaagaaaacaaattaccttcttgtggataacaaaac 355 ||| ||||| |||||||| | | | ||| ||||||||||| | |||||| || || Sbjct: 90 tggagttggtaatgttgacataaggaggaagacaaattacctcatcgtggattcaaagac 149 Query: 356 cacagtgaaacagattgaagatgcatttaaagaatttactgcaagggaggatattgctat 415 || |||| ||| ||||| ||||| || || ||||| | |||||||| ||||| ||||| Sbjct: 150 aactgtgagacaaattgaggatgctttcaaggaattctcagcaagggatgatatcgctat 209 Query: 416 tgtgctcatcagccaatatattgcaaacatgattagatttctggtggatagctacaacaa 475 | || | ||||||||||| || || ||||| | || ||||||||||||||||||| Sbjct: 210 cattcttttaagccaatatatcgccaatatgatccggttcttggtggatagctacaacaa 269 Query: 476 gccaatccctgcgatattggaaatcccatccaaggaccatccatatgatccagcaagtga 535 |||| | ||||| || ||||| ||||| |||||||||||||| |||||||| || ||| Sbjct: 270 gccagttcctgcaatcttggagatcccttccaaggaccatccctatgatcctgctcatga 329 Query: 536 ttcggtcctttctcgtgtgaagtatctattttctgc 571 ||| || || |||||||| ||||| || |||||||| Sbjct: 330 ttcagttctctctcgtgtcaagtacctcttttctgc 365
>gb|AY065277.1| Arabidopsis thaliana putative vacuolar ATPase (At4g02620) mRNA, complete cds Length = 619 Score = 127 bits (64), Expect = 7e-26 Identities = 268/336 (79%) Strand = Plus / Plus Query: 236 caactccgcgctcatcgccatcatcgctgatgaggacactgttactgggtttttgatggc 295 |||||| || |||||||| || ||||| ||||||||||||||| ||| ||||||||||| Sbjct: 84 caactctgccctcatcgcaatgatcgccgatgaggacactgttgttggatttttgatggc 143 Query: 296 tggggttggcaatgttgatctgcgcaagaaaacaaattaccttcttgtggataacaaaac 355 ||| ||||| |||||||| | | | ||| ||||||||||| | |||||| || || Sbjct: 144 tggagttggtaatgttgacataaggaggaagacaaattacctcatcgtggattcaaagac 203 Query: 356 cacagtgaaacagattgaagatgcatttaaagaatttactgcaagggaggatattgctat 415 || |||| ||| ||||| ||||| || || ||||| | |||||||| ||||| ||||| Sbjct: 204 aactgtgagacaaattgaggatgctttcaaggaattctcagcaagggatgatatcgctat 263 Query: 416 tgtgctcatcagccaatatattgcaaacatgattagatttctggtggatagctacaacaa 475 | || | ||||||||||| || || ||||| | || ||||||||||||||||||| Sbjct: 264 cattcttttaagccaatatatcgccaatatgatccggttcttggtggatagctacaacaa 323 Query: 476 gccaatccctgcgatattggaaatcccatccaaggaccatccatatgatccagcaagtga 535 |||| | ||||| || ||||| ||||| |||||||||||||| |||||||| || ||| Sbjct: 324 gccagttcctgcaatcttggagatcccttccaaggaccatccctatgatcctgctcatga 383 Query: 536 ttcggtcctttctcgtgtgaagtatctattttctgc 571 ||| || || |||||||| ||||| || |||||||| Sbjct: 384 ttcagttctctctcgtgtcaagtacctcttttctgc 419
>gb|AY084277.1| Arabidopsis thaliana clone 10207 mRNA, complete sequence Length = 600 Score = 127 bits (64), Expect = 7e-26 Identities = 268/336 (79%) Strand = Plus / Plus Query: 236 caactccgcgctcatcgccatcatcgctgatgaggacactgttactgggtttttgatggc 295 |||||| || |||||||| || ||||| ||||||||||||||| ||| ||||||||||| Sbjct: 105 caactctgccctcatcgcaatgatcgccgatgaggacactgttgttggatttttgatggc 164 Query: 296 tggggttggcaatgttgatctgcgcaagaaaacaaattaccttcttgtggataacaaaac 355 ||| ||||| |||||||| | | | ||| ||||||||||| | |||||| || || Sbjct: 165 tggagttggtaatgttgacataaggaggaagacaaattacctcatcgtggattcaaagac 224 Query: 356 cacagtgaaacagattgaagatgcatttaaagaatttactgcaagggaggatattgctat 415 || |||| ||| ||||| ||||| || || ||||| | |||||||| ||||| ||||| Sbjct: 225 aactgtgagacaaattgaggatgctttcaaggaattctcagcaagggatgatatcgctat 284 Query: 416 tgtgctcatcagccaatatattgcaaacatgattagatttctggtggatagctacaacaa 475 | || | ||||||||||| || || ||||| | || ||||||||||||||||||| Sbjct: 285 cattcttttaagccaatatatcgccaatatgatccggttcttggtggatagctacaacaa 344 Query: 476 gccaatccctgcgatattggaaatcccatccaaggaccatccatatgatccagcaagtga 535 |||| | ||||| || ||||| ||||| |||||||||||||| |||||||| || ||| Sbjct: 345 gccagttcctgcaatcttggagatcccttccaaggaccatccctatgatcctgctcatga 404 Query: 536 ttcggtcctttctcgtgtgaagtatctattttctgc 571 ||| || || |||||||| ||||| || |||||||| Sbjct: 405 ttcagttctctctcgtgtcaagtacctcttttctgc 440
>emb|BX828935.1|CNS0A3F5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL52ZE03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 612 Score = 127 bits (64), Expect = 7e-26 Identities = 268/336 (79%) Strand = Plus / Plus Query: 236 caactccgcgctcatcgccatcatcgctgatgaggacactgttactgggtttttgatggc 295 |||||| || |||||||| || ||||| ||||||||||||||| ||| ||||||||||| Sbjct: 108 caactctgccctcatcgcaatgatcgccgatgaggacactgttgttggatttttgatggc 167 Query: 296 tggggttggcaatgttgatctgcgcaagaaaacaaattaccttcttgtggataacaaaac 355 ||| ||||| |||||||| | | | ||| ||||||||||| | |||||| || || Sbjct: 168 tggagttggtaatgttgacataaggaggaagacaaattacctcatcgtggattcaaagac 227 Query: 356 cacagtgaaacagattgaagatgcatttaaagaatttactgcaagggaggatattgctat 415 || |||| ||| ||||| ||||| || || ||||| | |||||||| ||||| ||||| Sbjct: 228 aactgtgagacaaattgaggatgctttcaaggaattctcagcaagggatgatatcgctat 287 Query: 416 tgtgctcatcagccaatatattgcaaacatgattagatttctggtggatagctacaacaa 475 | || | ||||||||||| || || ||||| | || ||||||||||||||||||| Sbjct: 288 cattcttttaagccaatatatcgccaatatgatccggttcttggtggatagctacaacaa 347 Query: 476 gccaatccctgcgatattggaaatcccatccaaggaccatccatatgatccagcaagtga 535 |||| | ||||| || ||||| ||||| |||||||||||||| |||||||| || ||| Sbjct: 348 gccagttcctgcaatcttggagatcccttccaaggaccatccctatgatcctgctcatga 407 Query: 536 ttcggtcctttctcgtgtgaagtatctattttctgc 571 ||| || || |||||||| ||||| || |||||||| Sbjct: 408 ttcagttctctctcgtgtcaagtacctcttttctgc 443
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 121 bits (61), Expect = 4e-24 Identities = 139/165 (84%) Strand = Plus / Plus Query: 436 ttgcaaacatgattagatttctggtggatagctacaacaagccaatccctgcgatattgg 495 |||||||||||||||||||||| |||||||||||||||| || | ||||| ||||||| Sbjct: 2501507 ttgcaaacatgattagatttcttgtggatagctacaacagaccggttcctgctatattgg 2501566 Query: 496 aaatcccatccaaggaccatccatatgatccagcaagtgattcggtcctttctcgtgtga 555 | || ||||| ||||| ||||| ||||| |||||| ||||| ||||||||||| |||| Sbjct: 2501567 agattccatcgaaggatcatccttatgacccagcacacgattctgtcctttctcgcgtga 2501626 Query: 556 agtatctattttctgctgactcggttgcttctgataggcgttgag 600 |||| |||||||| ||||| || || || || |||||||| |||| Sbjct: 2501627 agtacctattttccgctgaatcagtggcgtcagataggcgatgag 2501671 Score = 79.8 bits (40), Expect = 1e-11 Identities = 73/84 (86%) Strand = Plus / Plus Query: 268 aggacactgttactgggtttttgatggctggggttggcaatgttgatctgcgcaagaaaa 327 ||||||| || |||||||||||| ||||||| |||||||||||||||||| | || || | Sbjct: 2500205 aggacacggtgactgggtttttgttggctggagttggcaatgttgatctgaggaaaaaga 2500264 Query: 328 caaattaccttcttgtggataaca 351 ||||||| ||| |||| ||||||| Sbjct: 2500265 caaattatcttattgttgataaca 2500288 Score = 69.9 bits (35), Expect = 1e-08 Identities = 71/83 (85%) Strand = Plus / Plus Query: 352 aaaccacagtgaaacagattgaagatgcatttaaagaatttactgcaagggaggatattg 411 |||| ||||| ||||| ||||||||||| ||||| || || ||| |||||||||| |||| Sbjct: 2500902 aaacaacagtcaaacaaattgaagatgcgtttaaggagttcactacaagggaggacattg 2500961 Query: 412 ctattgtgctcatcagccaatat 434 | ||||| |||||||| |||||| Sbjct: 2500962 caattgtactcatcagtcaatat 2500984 Score = 56.0 bits (28), Expect = 2e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 207 atggcggggaggtccaatatcccggcgaacaactccgcgctcatcgccatcatcgc 262 |||||||||||| ||| |||||| | |||| ||| |||||||||||||||||||| Sbjct: 2498870 atggcggggaggcccagcatcccgaccaacagctctgcgctcatcgccatcatcgc 2498925
>emb|AL731627.3|OSJN00272 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0095E20, complete sequence Length = 138572 Score = 121 bits (61), Expect = 4e-24 Identities = 139/165 (84%) Strand = Plus / Plus Query: 436 ttgcaaacatgattagatttctggtggatagctacaacaagccaatccctgcgatattgg 495 |||||||||||||||||||||| |||||||||||||||| || | ||||| ||||||| Sbjct: 117409 ttgcaaacatgattagatttcttgtggatagctacaacagaccggttcctgctatattgg 117468 Query: 496 aaatcccatccaaggaccatccatatgatccagcaagtgattcggtcctttctcgtgtga 555 | || ||||| ||||| ||||| ||||| |||||| ||||| ||||||||||| |||| Sbjct: 117469 agattccatcgaaggatcatccttatgacccagcacacgattctgtcctttctcgcgtga 117528 Query: 556 agtatctattttctgctgactcggttgcttctgataggcgttgag 600 |||| |||||||| ||||| || || || || |||||||| |||| Sbjct: 117529 agtacctattttccgctgaatcagtggcgtcagataggcgatgag 117573 Score = 71.9 bits (36), Expect = 3e-09 Identities = 72/84 (85%) Strand = Plus / Plus Query: 268 aggacactgttactgggtttttgatggctggggttggcaatgttgatctgcgcaagaaaa 327 ||||||| || |||||||||| | ||||||| |||||||||||||||||| | || || | Sbjct: 116107 aggacacggtgactgggttttagttggctggagttggcaatgttgatctgaggaaaaaga 116166 Query: 328 caaattaccttcttgtggataaca 351 ||||||| ||| |||| ||||||| Sbjct: 116167 caaattatcttattgttgataaca 116190 Score = 69.9 bits (35), Expect = 1e-08 Identities = 71/83 (85%) Strand = Plus / Plus Query: 352 aaaccacagtgaaacagattgaagatgcatttaaagaatttactgcaagggaggatattg 411 |||| ||||| ||||| ||||||||||| ||||| || || ||| |||||||||| |||| Sbjct: 116804 aaacaacagtcaaacaaattgaagatgcgtttaaggagttcactacaagggaggacattg 116863 Query: 412 ctattgtgctcatcagccaatat 434 | ||||| |||||||| |||||| Sbjct: 116864 caattgtactcatcagtcaatat 116886 Score = 56.0 bits (28), Expect = 2e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 207 atggcggggaggtccaatatcccggcgaacaactccgcgctcatcgccatcatcgc 262 |||||||||||| ||| |||||| | |||| ||| |||||||||||||||||||| Sbjct: 114772 atggcggggaggcccagcatcccgaccaacagctctgcgctcatcgccatcatcgc 114827
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 119 bits (60), Expect = 2e-23 Identities = 135/160 (84%) Strand = Plus / Plus Query: 436 ttgcaaacatgattagatttctggtggatagctacaacaagccaatccctgcgatattgg 495 |||| |||||||| || || ||||||||||||||||||| ||| | ||||| ||||||| Sbjct: 35448692 ttgcgaacatgataaggttcctggtggatagctacaacaggcccgttcctgctatattgg 35448751 Query: 496 aaatcccatccaaggaccatccatatgatccagcaagtgattcggtcctttctcgtgtga 555 | |||||||||||||| ||||| ||||| |||||| ||||| || |||||||| |||| Sbjct: 35448752 agatcccatccaaggatcatccgtatgacccagcacacgattctgttctttctcgcgtga 35448811 Query: 556 agtatctattttctgctgactcggttgcttctgataggcg 595 |||| || ||||||||||| ||||| || || |||||||| Sbjct: 35448812 agtacctgttttctgctgaatcggtggcatcagataggcg 35448851 Score = 87.7 bits (44), Expect = 6e-14 Identities = 74/84 (88%) Strand = Plus / Plus Query: 268 aggacactgttactgggtttttgatggctggggttggcaatgttgatctgcgcaagaaaa 327 ||||||| || |||||||||||| ||||||| |||||||||||||||||| | || || | Sbjct: 35447223 aggacacggtcactgggtttttgttggctggagttggcaatgttgatctgaggaaaaaga 35447282 Query: 328 caaattaccttcttgtggataaca 351 ||||||||||| |||| ||||||| Sbjct: 35447283 caaattaccttattgttgataaca 35447306 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 352 aaaccacagtgaaacagattgaagatgcatttaaagaatttactgcaagggaggatattg 411 |||| ||||| ||||| || |||||||||||||| ||||| ||| |||||||||| |||| Sbjct: 35447940 aaacaacagtcaaacaaatcgaagatgcatttaaggaattcactacaagggaggacattg 35447999 Query: 412 ctattgtgctcatcagccaatat 434 | ||||| ||||||||||||||| Sbjct: 35448000 caattgttctcatcagccaatat 35448022 Score = 56.0 bits (28), Expect = 2e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 207 atggcggggaggtccaatatcccggcgaacaactccgcgctcatcgccatcatcgc 262 |||||||||||| ||| |||||| | |||| |||||| ||||||||||||||||| Sbjct: 35446370 atggcggggaggcccagcatcccgaccaacagctccgctctcatcgccatcatcgc 35446425
>dbj|AP003989.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1063_D06 Length = 102439 Score = 119 bits (60), Expect = 2e-23 Identities = 135/160 (84%) Strand = Plus / Plus Query: 436 ttgcaaacatgattagatttctggtggatagctacaacaagccaatccctgcgatattgg 495 |||| |||||||| || || ||||||||||||||||||| ||| | ||||| ||||||| Sbjct: 60213 ttgcgaacatgataaggttcctggtggatagctacaacaggcccgttcctgctatattgg 60272 Query: 496 aaatcccatccaaggaccatccatatgatccagcaagtgattcggtcctttctcgtgtga 555 | |||||||||||||| ||||| ||||| |||||| ||||| || |||||||| |||| Sbjct: 60273 agatcccatccaaggatcatccgtatgacccagcacacgattctgttctttctcgcgtga 60332 Query: 556 agtatctattttctgctgactcggttgcttctgataggcg 595 |||| || ||||||||||| ||||| || || |||||||| Sbjct: 60333 agtacctgttttctgctgaatcggtggcatcagataggcg 60372 Score = 87.7 bits (44), Expect = 6e-14 Identities = 74/84 (88%) Strand = Plus / Plus Query: 268 aggacactgttactgggtttttgatggctggggttggcaatgttgatctgcgcaagaaaa 327 ||||||| || |||||||||||| ||||||| |||||||||||||||||| | || || | Sbjct: 58744 aggacacggtcactgggtttttgttggctggagttggcaatgttgatctgaggaaaaaga 58803 Query: 328 caaattaccttcttgtggataaca 351 ||||||||||| |||| ||||||| Sbjct: 58804 caaattaccttattgttgataaca 58827 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 352 aaaccacagtgaaacagattgaagatgcatttaaagaatttactgcaagggaggatattg 411 |||| ||||| ||||| || |||||||||||||| ||||| ||| |||||||||| |||| Sbjct: 59461 aaacaacagtcaaacaaatcgaagatgcatttaaggaattcactacaagggaggacattg 59520 Query: 412 ctattgtgctcatcagccaatat 434 | ||||| ||||||||||||||| Sbjct: 59521 caattgttctcatcagccaatat 59543 Score = 56.0 bits (28), Expect = 2e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 207 atggcggggaggtccaatatcccggcgaacaactccgcgctcatcgccatcatcgc 262 |||||||||||| ||| |||||| | |||| |||||| ||||||||||||||||| Sbjct: 57891 atggcggggaggcccagcatcccgaccaacagctccgctctcatcgccatcatcgc 57946
>ref|NM_116495.2| Arabidopsis thaliana tryptophan synthase (AT4G02610) mRNA, complete cds Length = 1216 Score = 93.7 bits (47), Expect = 9e-16 Identities = 98/115 (85%) Strand = Plus / Minus Query: 457 tggtggatagctacaacaagccaatccctgcgatattggaaatcccatccaaggaccatc 516 ||||||||||||||||||||||| | ||||| || ||||| ||||| ||||||||||||| Sbjct: 1194 tggtggatagctacaacaagccagttcctgcaatcttggagatcccttccaaggaccatc 1135 Query: 517 catatgatccagcaagtgattcggtcctttctcgtgtgaagtatctattttctgc 571 | |||||||| || |||||| || || |||||||| ||||| || |||||||| Sbjct: 1134 cctatgatcctgctcatgattcagttctctctcgtgtcaagtacctcttttctgc 1080
>gb|AC002330.1| Arabidopsis thaliana BAC T10P11 from chromosome IV, near 15 cM, complete sequence Length = 113566 Score = 93.7 bits (47), Expect = 9e-16 Identities = 98/115 (85%) Strand = Plus / Plus Query: 457 tggtggatagctacaacaagccaatccctgcgatattggaaatcccatccaaggaccatc 516 ||||||||||||||||||||||| | ||||| || ||||| ||||| ||||||||||||| Sbjct: 61539 tggtggatagctacaacaagccagttcctgcaatcttggagatcccttccaaggaccatc 61598 Query: 517 catatgatccagcaagtgattcggtcctttctcgtgtgaagtatctattttctgc 571 | |||||||| || |||||| || || |||||||| ||||| || |||||||| Sbjct: 61599 cctatgatcctgctcatgattcagttctctctcgtgtcaagtacctcttttctgc 61653 Score = 52.0 bits (26), Expect = 0.003 Identities = 41/46 (89%) Strand = Plus / Plus Query: 268 aggacactgttactgggtttttgatggctggggttggcaatgttga 313 ||||||||||| ||| |||||||||||||| ||||| |||||||| Sbjct: 60679 aggacactgttgttggatttttgatggctggagttggtaatgttga 60724
>emb|AL161494.2|ATCHRIV6 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 6 Length = 194892 Score = 93.7 bits (47), Expect = 9e-16 Identities = 98/115 (85%) Strand = Plus / Minus Query: 457 tggtggatagctacaacaagccaatccctgcgatattggaaatcccatccaaggaccatc 516 ||||||||||||||||||||||| | ||||| || ||||| ||||| ||||||||||||| Sbjct: 185206 tggtggatagctacaacaagccagttcctgcaatcttggagatcccttccaaggaccatc 185147 Query: 517 catatgatccagcaagtgattcggtcctttctcgtgtgaagtatctattttctgc 571 | |||||||| || |||||| || || |||||||| ||||| || |||||||| Sbjct: 185146 cctatgatcctgctcatgattcagttctctctcgtgtcaagtacctcttttctgc 185092 Score = 52.0 bits (26), Expect = 0.003 Identities = 41/46 (89%) Strand = Plus / Minus Query: 268 aggacactgttactgggtttttgatggctggggttggcaatgttga 313 ||||||||||| ||| |||||||||||||| ||||| |||||||| Sbjct: 186066 aggacactgttgttggatttttgatggctggagttggtaatgttga 186021
>gb|DQ198167.1| Nicotiana tabacum cultivar Samsun NN vacuolar ATP-related protein mRNA, partial cds Length = 455 Score = 71.9 bits (36), Expect = 3e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 423 atcagccaatatattgcaaacatgattagatttctggtggatagctacaacaagccaatc 482 |||||||||||| | ||||||||||| ||||| |||| ||||||||||| || ||||| Sbjct: 20 atcagccaatatgtcgcaaacatgatcagattcttggttgatagctacaataaaccaatt 79 Query: 483 cctgcgatattggaaatcccatccaaggaccatccatatgatcc 526 || || || |||| || || || |||||||||||||||||||| Sbjct: 80 ccagccattctggagattccttcaaaggaccatccatatgatcc 123
>dbj|AP006681.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT45D03, TM0375b, complete sequence Length = 61653 Score = 61.9 bits (31), Expect = 3e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 436 ttgcaaacatgattagatttctggtggatagctacaacaagccaatccctgcgatattgg 495 ||||||| ||||| || ||||| || ||||||||||||||||| | ||||| ||||||| Sbjct: 1349 ttgcaaatatgataaggtttctagttgatagctacaacaagcctgttcctgcaatattgg 1290 Query: 496 aaatcccatccaaggaccatccatatgatcc 526 | || || ||||| ||||| || |||||||| Sbjct: 1289 agattccctccaaagaccacccttatgatcc 1259 Score = 44.1 bits (22), Expect = 0.77 Identities = 43/50 (86%) Strand = Plus / Minus Query: 363 aaacagattgaagatgcatttaaagaatttactgcaagggaggatattgc 412 ||||| |||||||||||||| ||||| || || ||||||| |||||||| Sbjct: 1686 aaacaaattgaagatgcattcaaagagttcacaacaagggaagatattgc 1637
>emb|CT573079.6| Zebrafish DNA sequence from clone CH73-149G16 in linkage group 4, complete sequence Length = 119802 Score = 52.0 bits (26), Expect = 0.003 Identities = 32/34 (94%) Strand = Plus / Minus Query: 669 atctgtattaaattattcatgccattctgttgtg 702 |||||||||| ||||||| ||||||||||||||| Sbjct: 10348 atctgtattatattattcctgccattctgttgtg 10315
>emb|CR751234.13| Zebrafish DNA sequence from clone DKEY-164M14 in linkage group 20 Contains the gene for a novel protein similar to vertebrate bromodomain containing 1 (BRD1), the gene for a novel protein similar to vertebrate asparagine-linked glycosylation 12 homolog (yeast, alpha-1,6-mannosyltransferase) (ALG12), the gene for a novel protein similar to vertebrate solute carrier family 6 (neurotransmitter transporter, GABA), member 1 (SLC6A1), the gene for a novel protein similar to vertebrate zinc finger, BED domain containing 4 (ZBED4), the gene for a novel protein similar to vertebrate cysteine-rich with EGF-like domains 1 (CRELD1) (zgc:66383) and three CpG islands, complete sequence Length = 218596 Score = 52.0 bits (26), Expect = 0.003 Identities = 32/34 (94%) Strand = Plus / Minus Query: 669 atctgtattaaattattcatgccattctgttgtg 702 |||||||||| ||||||| ||||||||||||||| Sbjct: 171398 atctgtattatattattcctgccattctgttgtg 171365
>emb|BX004862.9| Zebrafish DNA sequence from clone DKEY-200M9 in linkage group 4 Contains the gene for a novel protein similar to vertebrate TAFA protein 5 (TAFA5) and a CpG island, complete sequence Length = 174359 Score = 52.0 bits (26), Expect = 0.003 Identities = 32/34 (94%) Strand = Plus / Plus Query: 669 atctgtattaaattattcatgccattctgttgtg 702 |||||||||| ||||||| ||||||||||||||| Sbjct: 136757 atctgtattatattattcctgccattctgttgtg 136790
>ref|XM_969923.1| PREDICTED: Tribolium castaneum similar to CG8210-PA (LOC663894), mRNA Length = 372 Score = 50.1 bits (25), Expect = 0.012 Identities = 50/57 (87%), Gaps = 1/57 (1%) Strand = Plus / Plus Query: 477 ccaatccctgcgatattggaaatcccatccaaggaccatccatatgat-ccagcaag 532 ||||||||||| | |||||||| || || |||||||||||||||||| |||||||| Sbjct: 262 ccaatccctgctgtcttggaaattccgtcaaaggaccatccatatgatgccagcaag 318
>ref|XM_715957.1| Candida albicans SC5314 vacuolar membrane ATPase subunit F (CaO19_8424), mRNA Length = 369 Score = 48.1 bits (24), Expect = 0.049 Identities = 30/32 (93%) Strand = Plus / Plus Query: 495 gaaatcccatccaaggaccatccatatgatcc 526 |||||||||||||| |||||||| |||||||| Sbjct: 289 gaaatcccatccaaagaccatccgtatgatcc 320
>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence Length = 27905053 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Minus Query: 432 tatattgcaaacatgattagat 453 |||||||||||||||||||||| Sbjct: 13470253 tatattgcaaacatgattagat 13470232
>gb|AY426266.1| Solanum tarijense blight resistance protein T118 gene, partial cds Length = 3641 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Plus Query: 556 agtatctattttctgctgactc 577 |||||||||||||||||||||| Sbjct: 1144 agtatctattttctgctgactc 1165
>gb|AC009461.5|AC009461 Drosophila melanogaster, chromosome 3R, region 90B-90C, BAC clone BACR11L13, complete sequence Length = 171612 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Minus Query: 432 tatattgcaaacatgattagat 453 |||||||||||||||||||||| Sbjct: 144024 tatattgcaaacatgattagat 144003
>gb|AC009742.4|AC009742 Drosophila melanogaster, chromosome 3R, region 90C-90C, BAC clone BACR21K03, complete sequence Length = 178100 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Minus Query: 432 tatattgcaaacatgattagat 453 |||||||||||||||||||||| Sbjct: 78537 tatattgcaaacatgattagat 78516
>gb|CP000082.1| Psychrobacter arcticus 273-4, complete genome Length = 2650701 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 372 gaagatgcatttaaagaattt 392 ||||||||||||||||||||| Sbjct: 357420 gaagatgcatttaaagaattt 357400
>gb|AC024451.8| Homo sapiens chromosome 11, clone RP11-697N18, complete sequence Length = 159791 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 139 tgcctgtgattcctgctttca 159 ||||||||||||||||||||| Sbjct: 127417 tgcctgtgattcctgctttca 127437
>emb|AL034349.3|HS86D1 Human DNA sequence from clone RP1-86D1 on chromosome 6q22.2-23.1 Contains two novel genes and the 5' end of the PTPRK gene for protein tyrosine phosphatase, receptor type K (R-PTP-KAPPA) and a CpG island, complete sequence Length = 112604 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 663 ccatgtatctgtattaaatta 683 ||||||||||||||||||||| Sbjct: 81074 ccatgtatctgtattaaatta 81094
>emb|CR380950.1| Candida glabrata strain CBS138 chromosome D complete sequence Length = 651701 Score = 42.1 bits (21), Expect = 3.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 495 gaaatcccatccaaggaccatccatatga 523 ||||| ||||| ||||||||||||||||| Sbjct: 403215 gaaattccatctaaggaccatccatatga 403187
>emb|BX649557.8| Zebrafish DNA sequence from clone DKEYP-61G11 in linkage group 3, complete sequence Length = 163934 Score = 42.1 bits (21), Expect = 3.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 369 attgaagatgcatttaaagaattta 393 |||||||||| |||||||||||||| Sbjct: 35667 attgaagatgaatttaaagaattta 35643
>emb|BX470133.27| Zebrafish DNA sequence from clone DKEY-169N7 in linkage group 9, complete sequence Length = 178929 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 745 gttaatgtaataattttttac 765 ||||||||||||||||||||| Sbjct: 84193 gttaatgtaataattttttac 84173
>emb|BX842683.9| Zebrafish DNA sequence from clone DKEYP-118H3 in linkage group 9, complete sequence Length = 160823 Score = 42.1 bits (21), Expect = 3.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 749 atgtaataattttttactcttcttt 773 |||||||||||||||||||| |||| Sbjct: 119049 atgtaataattttttactctacttt 119025
>ref|XM_445592.1| Candida glabrata CBS138, CAGL0D04048g partial mRNA Length = 357 Score = 42.1 bits (21), Expect = 3.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 495 gaaatcccatccaaggaccatccatatga 523 ||||| ||||| ||||||||||||||||| Sbjct: 277 gaaattccatctaaggaccatccatatga 305
>gb|AC149334.2| Phakopsora pachyrhizi clone JGIAFNA-25D12, complete sequence Length = 35801 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 755 taattttttactcttcttttg 775 ||||||||||||||||||||| Sbjct: 22198 taattttttactcttcttttg 22178
>gb|AC147718.1| Gallus gallus BAC clone CH261-18A20 from chromosome unknown, complete sequence Length = 185989 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 753 aataattttttactcttcttt 773 ||||||||||||||||||||| Sbjct: 28823 aataattttttactcttcttt 28843 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 146,491,018 Number of extensions: 7973368 Number of successful extensions: 171807 Number of sequences better than 10.0: 45 Number of HSP's gapped: 171797 Number of HSP's successfully gapped: 67 Length of query: 808 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 786 Effective length of database: 18,508,616,841 Effective search space: 14547772837026 Effective search space used: 14547772837026 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)