ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf27c21 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001062315.1| Oryza sativa (japonica cultivar-group) Os05g0465000 (Os05g0465000) mRNA, complete cds Length = 657 Score = 115 bits (58), Expect = 2e-22 Identities = 73/78 (93%) Strand = Plus / Plus Query: 118 aaggagaggaggccaccgctgaagagggggcagctgaagcggcagatcgtgaggaccatc 177 ||||||| |||||| |||||||||||||||||||||||||||||||| |||||||| || Sbjct: 227 aaggagaagaggccgccgctgaagagggggcagctgaagcggcagattgtgaggacgctc 286 Query: 178 agcaacctcatggcgccg 195 |||||||||||||||||| Sbjct: 287 agcaacctcatggcgccg 304
>gb|AC121361.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0009E21, complete sequence Length = 153214 Score = 115 bits (58), Expect = 2e-22 Identities = 73/78 (93%) Strand = Plus / Plus Query: 118 aaggagaggaggccaccgctgaagagggggcagctgaagcggcagatcgtgaggaccatc 177 ||||||| |||||| |||||||||||||||||||||||||||||||| |||||||| || Sbjct: 38562 aaggagaagaggccgccgctgaagagggggcagctgaagcggcagattgtgaggacgctc 38621 Query: 178 agcaacctcatggcgccg 195 |||||||||||||||||| Sbjct: 38622 agcaacctcatggcgccg 38639 Score = 91.7 bits (46), Expect = 3e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 118 aaggagaggaggccaccgctgaagagggggcagctgaagcggcagatcgtgaggaccatc 177 ||||||| ||||||||||||||||||||||||| | ||||| ||||||||||| |||| Sbjct: 17849 aaggagaagaggccaccgctgaagagggggcaggtcaagcgcaggatcgtgaggagcatc 17790 Query: 178 agcaacctcatggc 191 |||||||||||||| Sbjct: 17789 agcaacctcatggc 17776 Score = 60.0 bits (30), Expect = 1e-05 Identities = 66/78 (84%) Strand = Plus / Minus Query: 118 aaggagaggaggccaccgctgaagagggggcagctgaagcggcagatcgtgaggaccatc 177 ||||||| |||||| || | || ||| || ||||| ||||||||||||| ||||||| | Sbjct: 36586 aaggagaagaggccgccaccgaggagaggtcagctcaagcggcagatcgcgaggaccttg 36527 Query: 178 agcaacctcatggcgccg 195 ||||||||||||| |||| Sbjct: 36526 agcaacctcatggtgccg 36509
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 115 bits (58), Expect = 2e-22 Identities = 73/78 (93%) Strand = Plus / Plus Query: 118 aaggagaggaggccaccgctgaagagggggcagctgaagcggcagatcgtgaggaccatc 177 ||||||| |||||| |||||||||||||||||||||||||||||||| |||||||| || Sbjct: 22683363 aaggagaagaggccgccgctgaagagggggcagctgaagcggcagattgtgaggacgctc 22683422 Query: 178 agcaacctcatggcgccg 195 |||||||||||||||||| Sbjct: 22683423 agcaacctcatggcgccg 22683440 Score = 91.7 bits (46), Expect = 3e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 118 aaggagaggaggccaccgctgaagagggggcagctgaagcggcagatcgtgaggaccatc 177 ||||||| ||||||||||||||||||||||||| | ||||| ||||||||||| |||| Sbjct: 22662650 aaggagaagaggccaccgctgaagagggggcaggtcaagcgcaggatcgtgaggagcatc 22662591 Query: 178 agcaacctcatggc 191 |||||||||||||| Sbjct: 22662590 agcaacctcatggc 22662577 Score = 60.0 bits (30), Expect = 1e-05 Identities = 66/78 (84%) Strand = Plus / Minus Query: 118 aaggagaggaggccaccgctgaagagggggcagctgaagcggcagatcgtgaggaccatc 177 ||||||| |||||| || | || ||| || ||||| ||||||||||||| ||||||| | Sbjct: 22681387 aaggagaagaggccgccaccgaggagaggtcagctcaagcggcagatcgcgaggaccttg 22681328 Query: 178 agcaacctcatggcgccg 195 ||||||||||||| |||| Sbjct: 22681327 agcaacctcatggtgccg 22681310 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 486 gcagttgcagacttgcagta 505 |||||||||||||||||||| Sbjct: 15956919 gcagttgcagacttgcagta 15956938 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 487 cagttgcagacttgcagtac 506 |||||||||||||||||||| Sbjct: 25714081 cagttgcagacttgcagtac 25714100
>dbj|AK111286.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-180-H09, full insert sequence Length = 657 Score = 115 bits (58), Expect = 2e-22 Identities = 73/78 (93%) Strand = Plus / Plus Query: 118 aaggagaggaggccaccgctgaagagggggcagctgaagcggcagatcgtgaggaccatc 177 ||||||| |||||| |||||||||||||||||||||||||||||||| |||||||| || Sbjct: 227 aaggagaagaggccgccgctgaagagggggcagctgaagcggcagattgtgaggacgctc 286 Query: 178 agcaacctcatggcgccg 195 |||||||||||||||||| Sbjct: 287 agcaacctcatggcgccg 304
>emb|CT833391.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN039E21, full insert sequence Length = 567 Score = 91.7 bits (46), Expect = 3e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 118 aaggagaggaggccaccgctgaagagggggcagctgaagcggcagatcgtgaggaccatc 177 ||||||| ||||||||||||||||||||||||| | ||||| ||||||||||| |||| Sbjct: 140 aaggagaagaggccaccgctgaagagggggcaggtcaagcgcaggatcgtgaggagcatc 199 Query: 178 agcaacctcatggc 191 |||||||||||||| Sbjct: 200 agcaacctcatggc 213
>ref|NM_001062314.1| Oryza sativa (japonica cultivar-group) Os05g0464300 (Os05g0464300) mRNA, complete cds Length = 572 Score = 91.7 bits (46), Expect = 3e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 118 aaggagaggaggccaccgctgaagagggggcagctgaagcggcagatcgtgaggaccatc 177 ||||||| ||||||||||||||||||||||||| | ||||| ||||||||||| |||| Sbjct: 143 aaggagaagaggccaccgctgaagagggggcaggtcaagcgcaggatcgtgaggagcatc 202 Query: 178 agcaacctcatggc 191 |||||||||||||| Sbjct: 203 agcaacctcatggc 216
>gb|AC108500.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1280_A04, complete sequence Length = 88553 Score = 91.7 bits (46), Expect = 3e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 118 aaggagaggaggccaccgctgaagagggggcagctgaagcggcagatcgtgaggaccatc 177 ||||||| ||||||||||||||||||||||||| | ||||| ||||||||||| |||| Sbjct: 75188 aaggagaagaggccaccgctgaagagggggcaggtcaagcgcaggatcgtgaggagcatc 75129 Query: 178 agcaacctcatggc 191 |||||||||||||| Sbjct: 75128 agcaacctcatggc 75115
>dbj|AK062470.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-103-E07, full insert sequence Length = 572 Score = 91.7 bits (46), Expect = 3e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 118 aaggagaggaggccaccgctgaagagggggcagctgaagcggcagatcgtgaggaccatc 177 ||||||| ||||||||||||||||||||||||| | ||||| ||||||||||| |||| Sbjct: 143 aaggagaagaggccaccgctgaagagggggcaggtcaagcgcaggatcgtgaggagcatc 202 Query: 178 agcaacctcatggc 191 |||||||||||||| Sbjct: 203 agcaacctcatggc 216
>emb|CT829780.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN085D03, full insert sequence Length = 632 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 118 aaggagaggaggccaccgctgaagagggggcagctgaagcggcagatcg 166 ||||||| |||||| |||||||||||||||||||| |||| |||||||| Sbjct: 187 aaggagaagaggcctccgctgaagagggggcagctcaagctgcagatcg 235
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 118 aaggagaggaggccaccgctgaagagggggcagctgaagcggcagatcg 166 ||||||| |||||| |||||||||||||||||||| |||| |||||||| Sbjct: 35775378 aaggagaagaggcctccgctgaagagggggcagctcaagctgcagatcg 35775330
>dbj|AP004366.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0460C04 Length = 189043 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 118 aaggagaggaggccaccgctgaagagggggcagctgaagcggcagatcg 166 ||||||| |||||| |||||||||||||||||||| |||| |||||||| Sbjct: 178715 aaggagaagaggcctccgctgaagagggggcagctcaagctgcagatcg 178667
>dbj|AP003271.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0506B12 Length = 170759 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 118 aaggagaggaggccaccgctgaagagggggcagctgaagcggcagatcg 166 ||||||| |||||| |||||||||||||||||||| |||| |||||||| Sbjct: 39836 aaggagaagaggcctccgctgaagagggggcagctcaagctgcagatcg 39788
>ref|XM_534337.2| PREDICTED: Canis familiaris similar to Destrin (Actin-depolymerizing factor) (ADF) (LOC477147), mRNA Length = 1675 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 347 acttggtagctgggagactgttc 369 ||||||||||||||||||||||| Sbjct: 1189 acttggtagctgggagactgttc 1211
>emb|CR855139.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0404F02, complete sequence Length = 130181 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 484 ctgcagttgcagacttgcagta 505 |||||||||||||||||||||| Sbjct: 117255 ctgcagttgcagacttgcagta 117234
>ref|NM_001060178.1| Oryza sativa (japonica cultivar-group) Os04g0578800 (Os04g0578800) mRNA, complete cds Length = 2284 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 484 ctgcagttgcagacttgcagta 505 |||||||||||||||||||||| Sbjct: 2051 ctgcagttgcagacttgcagta 2072
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 484 ctgcagttgcagacttgcagta 505 |||||||||||||||||||||| Sbjct: 29167810 ctgcagttgcagacttgcagta 29167789 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 487 cagttgcagacttgcagtactcctg 511 ||||||||||||||||||| ||||| Sbjct: 31965696 cagttgcagacttgcagtagtcctg 31965672
>emb|AL606624.4|OSJN00058 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011J08, complete sequence Length = 157734 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 484 ctgcagttgcagacttgcagta 505 |||||||||||||||||||||| Sbjct: 77269 ctgcagttgcagacttgcagta 77248
>dbj|AK072395.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023076N09, full insert sequence Length = 2285 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 484 ctgcagttgcagacttgcagta 505 |||||||||||||||||||||| Sbjct: 2052 ctgcagttgcagacttgcagta 2073
>emb|CT827959.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0303G06, complete sequence Length = 108846 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 487 cagttgcagacttgcagtactcctg 511 ||||||||||||||||||| ||||| Sbjct: 18220 cagttgcagacttgcagtagtcctg 18196
>emb|CT827955.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0117N13, complete sequence Length = 105220 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 487 cagttgcagacttgcagtactcctg 511 ||||||||||||||||||| ||||| Sbjct: 60713 cagttgcagacttgcagtagtcctg 60689
>gb|AC189937.4| Rhesus Macaque BAC CH250-62N11 () complete sequence Length = 173397 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 40 agaagcaacacagaaagaaga 60 ||||||||||||||||||||| Sbjct: 100176 agaagcaacacagaaagaaga 100156
>ref|XM_520676.2| PREDICTED: Pan troglodytes solute carrier family 39 (zinc transporter), member 2 (SLC39A2), mRNA Length = 1383 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 40 agaagcaacacagaaagaaga 60 ||||||||||||||||||||| Sbjct: 10 agaagcaacacagaaagaaga 30
>ref|XM_001093488.1| PREDICTED: Macaca mulatta similar to Zinc transporter ZIP2 (Eti-1) (6A1) (hZIP2) (Solute carrier family 39 member 2), transcript variant 2 (SLC39A2), mRNA Length = 2025 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 40 agaagcaacacagaaagaaga 60 ||||||||||||||||||||| Sbjct: 651 agaagcaacacagaaagaaga 671
>emb|BX005399.30| Zebrafish DNA sequence from clone DKEY-3D16 in linkage group 8, complete sequence Length = 193926 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 27942 gggggagctgaagcggcagatcatgagga 27914 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 32638 gggggagctgaagcggcagatcatgagga 32610 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 37318 gggggagctgaagcggcagatcatgagga 37290 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 59500 gggggagctgaagcggcagatcatgagga 59472 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 68347 gggggagctgaagcggcagatcatgagga 68319 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 73062 gggggagctgaagcggcagatcatgagga 73034 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 113645 gggggagctgaagcggcagatcatgagga 113617 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 123872 gggggagctgaagcggcagatcatgagga 123844 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 151831 gggggagctgaagcggcagatcatgagga 151803 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 156542 gggggagctgaagcggcagatcatgagga 156514 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 161249 gggggagctgaagcggcagatcatgagga 161221 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 165956 gggggagctgaagcggcagatcatgagga 165928
>emb|CR786581.30| Zebrafish DNA sequence from clone DKEY-179C19 in linkage group 8, complete sequence Length = 166217 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 39197 gggggagctgaagcggcagatcatgagga 39169 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 49814 gggggagctgaagcggcagatcatgagga 49786 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 60387 gggggagctgaagcggcagatcatgagga 60359 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 65110 gggggagctgaagcggcagatcatgagga 65082 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 69827 gggggagctgaagcggcagatcatgagga 69799 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 74564 gggggagctgaagcggcagatcatgagga 74536 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 79292 gggggagctgaagcggcagatcatgagga 79264 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 83989 gggggagctgaagcggcagatcatgagga 83961 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 133475 gggggagctgaagcggcagatcatgagga 133447 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 138178 gggggagctgaagcggcagatcatgagga 138150 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 150552 gggggagctgaagcggcagatcatgagga 150524
>ref|NM_008745.2| Mus musculus neurotrophic tyrosine kinase, receptor, type 2 (Ntrk2), transcript variant 2, mRNA Length = 7022 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 349 ttggtagctgggagactgttc 369 ||||||||||||||||||||| Sbjct: 3343 ttggtagctgggagactgttc 3323
>ref|NM_200894.1| Danio rerio zgc:77614 (zgc:77614), mRNA gb|BC064287.1| Danio rerio zgc:77614, mRNA (cDNA clone MGC:77614 IMAGE:6996578), complete cds Length = 1039 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 264 gggggagctgaagcggcagatcatgagga 292
>gb|AC128862.4| Rattus norvegicus 4 BAC CH230-419L6 (Children's Hospital Oakland Research Institute) complete sequence Length = 184149 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 463 tttcgtatgtgatatactcac 483 ||||||||||||||||||||| Sbjct: 26067 tttcgtatgtgatatactcac 26087
>gb|AC115440.6| Rattus norvegicus 4 BAC CH230-183D1 (Children's Hospital Oakland Research Institute) complete sequence Length = 143322 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 463 tttcgtatgtgatatactcac 483 ||||||||||||||||||||| Sbjct: 89697 tttcgtatgtgatatactcac 89717
>dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009 Length = 1913118 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 487 cagttgcagacttgcagtact 507 ||||||||||||||||||||| Sbjct: 1782735 cagttgcagacttgcagtact 1782755
>dbj|AK147441.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1042H21 product:neurotrophic tyrosine kinase, receptor, type 2, full insert sequence Length = 6846 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 349 ttggtagctgggagactgttc 369 ||||||||||||||||||||| Sbjct: 3191 ttggtagctgggagactgttc 3171
>dbj|AB168166.1| Macaca fascicularis testis cDNA clone: QtsA-10276, similar to human solute carrier family 39 (zinc transporter), member 2(SLC39A2), mRNA, RefSeq: NM_014579.1 Length = 2039 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 40 agaagcaacacagaaagaaga 60 ||||||||||||||||||||| Sbjct: 621 agaagcaacacagaaagaaga 641
>ref|XM_685494.1| PREDICTED: Danio rerio similar to retinoblastoma-binding protein 6 isoform 2, transcript variant 1 (LOC573262), mRNA Length = 426 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 78 gggggagctgaagcggcagatcatgagga 106
>ref|XM_704340.1| PREDICTED: Danio rerio similar to retinoblastoma-binding protein 6 isoform 2, transcript variant 5 (LOC573262), mRNA Length = 862 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 239 gggggagctgaagcggcagatcatgagga 267
>ref|XM_704339.1| PREDICTED: Danio rerio similar to retinoblastoma-binding protein 6 isoform 2, transcript variant 4 (LOC573262), mRNA Length = 764 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 242 gggggagctgaagcggcagatcatgagga 270
>ref|XM_704338.1| PREDICTED: Danio rerio similar to retinoblastoma-binding protein 6 isoform 2, transcript variant 3 (LOC573262), mRNA Length = 920 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 194 gggggagctgaagcggcagatcatgagga 222
>ref|XM_704337.1| PREDICTED: Danio rerio similar to retinoblastoma-binding protein 6 isoform 2, transcript variant 2 (LOC573262), mRNA Length = 701 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 78 gggggagctgaagcggcagatcatgagga 106
>ref|XM_704147.1| PREDICTED: Danio rerio similar to retinoblastoma-binding protein 6 isoform 2, transcript variant 8 (LOC573203), mRNA Length = 658 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 78 gggggagctgaagcggcagatcatgagga 106
>ref|XM_704146.1| PREDICTED: Danio rerio similar to retinoblastoma-binding protein 6 isoform 2, transcript variant 7 (LOC573203), mRNA Length = 797 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 78 gggggagctgaagcggcagatcatgagga 106
>ref|XM_704143.1| PREDICTED: Danio rerio similar to retinoblastoma-binding protein 6 isoform 2, transcript variant 4 (LOC573203), mRNA Length = 877 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 78 gggggagctgaagcggcagatcatgagga 106
>ref|XM_704142.1| PREDICTED: Danio rerio similar to retinoblastoma-binding protein 6 isoform 2, transcript variant 3 (LOC573203), mRNA Length = 701 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 78 gggggagctgaagcggcagatcatgagga 106
>ref|XM_704141.1| PREDICTED: Danio rerio similar to retinoblastoma-binding protein 6 isoform 2, transcript variant 2 (LOC573203), mRNA Length = 816 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 78 gggggagctgaagcggcagatcatgagga 106
>ref|XM_684026.1| PREDICTED: Danio rerio similar to retinoblastoma-binding protein 6 isoform 2, transcript variant 1 (LOC573203), mRNA Length = 813 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 78 gggggagctgaagcggcagatcatgagga 106
>ref|XM_703879.1| PREDICTED: Danio rerio similar to retinoblastoma-binding protein 6 isoform 2, transcript variant 8 (LOC573184), mRNA Length = 1060 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 261 gggggagctgaagcggcagatcatgagga 289
>ref|XM_703878.1| PREDICTED: Danio rerio similar to retinoblastoma-binding protein 6 isoform 2, transcript variant 7 (LOC573184), mRNA Length = 966 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 240 gggggagctgaagcggcagatcatgagga 268
>ref|XM_703874.1| PREDICTED: Danio rerio similar to retinoblastoma-binding protein 6 isoform 2, transcript variant 3 (LOC573184), mRNA Length = 1060 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 261 gggggagctgaagcggcagatcatgagga 289
>ref|XM_703873.1| PREDICTED: Danio rerio similar to retinoblastoma-binding protein 6 isoform 2, transcript variant 2 (LOC573184), mRNA Length = 884 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 261 gggggagctgaagcggcagatcatgagga 289
>ref|XM_682746.1| PREDICTED: Danio rerio similar to retinoblastoma-binding protein 6 isoform 2, transcript variant 1 (LOC573184), mRNA Length = 1005 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 267 gggggagctgaagcggcagatcatgagga 295
>ref|XM_703641.1| PREDICTED: Danio rerio similar to retinoblastoma-binding protein 6 isoform 3, transcript variant 3 (LOC573177), mRNA Length = 877 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 78 gggggagctgaagcggcagatcatgagga 106
>ref|XM_703640.1| PREDICTED: Danio rerio similar to retinoblastoma-binding protein 6 isoform 3, transcript variant 2 (LOC573177), mRNA Length = 694 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 78 gggggagctgaagcggcagatcatgagga 106
>ref|XM_682209.1| PREDICTED: Danio rerio similar to retinoblastoma-binding protein 6 isoform 3, transcript variant 1 (LOC573177), mRNA Length = 880 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 142 gggggagctgaagcggcagatcatgagga 170
>ref|XM_685406.1| PREDICTED: Danio rerio similar to retinoblastoma-binding protein 6 isoform 3 (LOC562004), mRNA Length = 1131 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 240 gggggagctgaagcggcagatcatgagga 268
>ref|XM_703159.1| PREDICTED: Danio rerio similar to retinoblastoma-binding protein 6 isoform 3, transcript variant 5 (LOC573060), mRNA Length = 1060 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 261 gggggagctgaagcggcagatcatgagga 289
>ref|XM_703158.1| PREDICTED: Danio rerio similar to retinoblastoma-binding protein 6 isoform 3, transcript variant 4 (LOC573060), mRNA Length = 783 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 261 gggggagctgaagcggcagatcatgagga 289
>ref|XM_703157.1| PREDICTED: Danio rerio similar to retinoblastoma-binding protein 6 isoform 3, transcript variant 3 (LOC573060), mRNA Length = 967 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 240 gggggagctgaagcggcagatcatgagga 268
>ref|XM_703156.1| PREDICTED: Danio rerio similar to retinoblastoma-binding protein 6 isoform 3, transcript variant 2 (LOC573060), mRNA Length = 885 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 261 gggggagctgaagcggcagatcatgagga 289
>ref|XM_680955.1| PREDICTED: Danio rerio similar to retinoblastoma-binding protein 6 isoform 3, transcript variant 1 (LOC573060), mRNA Length = 1005 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 267 gggggagctgaagcggcagatcatgagga 295
>ref|XM_702705.1| PREDICTED: Danio rerio similar to retinoblastoma-binding protein 6 isoform 3, transcript variant 9 (LOC572777), mRNA Length = 783 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 261 gggggagctgaagcggcagatcatgagga 289
>ref|XM_702704.1| PREDICTED: Danio rerio similar to retinoblastoma-binding protein 6 isoform 3, transcript variant 8 (LOC572777), mRNA Length = 1157 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 261 gggggagctgaagcggcagatcatgagga 289
>ref|XM_702703.1| PREDICTED: Danio rerio similar to retinoblastoma-binding protein 6 isoform 3, transcript variant 7 (LOC572777), mRNA Length = 1238 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 240 gggggagctgaagcggcagatcatgagga 268
>ref|XM_680010.1| PREDICTED: Danio rerio similar to retinoblastoma-binding protein 6 isoform 3, transcript variant 1 (LOC572777), mRNA Length = 999 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 261 gggggagctgaagcggcagatcatgagga 289
>ref|XM_702702.1| PREDICTED: Danio rerio similar to retinoblastoma-binding protein 6 isoform 3, transcript variant 6 (LOC572777), mRNA Length = 1060 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 261 gggggagctgaagcggcagatcatgagga 289
>ref|XM_678550.1| PREDICTED: Danio rerio similar to retinoblastoma-binding protein 6 isoform 2, transcript variant 1 (LOC572747), mRNA Length = 958 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 240 gggggagctgaagcggcagatcatgagga 268
>ref|XM_702070.1| PREDICTED: Danio rerio similar to retinoblastoma-binding protein 6 isoform 2, transcript variant 9 (LOC572747), mRNA Length = 522 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 78 gggggagctgaagcggcagatcatgagga 106
>ref|XM_702069.1| PREDICTED: Danio rerio similar to retinoblastoma-binding protein 6 isoform 2, transcript variant 8 (LOC572747), mRNA Length = 701 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 78 gggggagctgaagcggcagatcatgagga 106
>ref|XM_702068.1| PREDICTED: Danio rerio similar to retinoblastoma-binding protein 6 isoform 2, transcript variant 7 (LOC572747), mRNA Length = 963 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 245 gggggagctgaagcggcagatcatgagga 273
>ref|XM_702067.1| PREDICTED: Danio rerio similar to retinoblastoma-binding protein 6 isoform 2, transcript variant 6 (LOC572747), mRNA Length = 966 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 240 gggggagctgaagcggcagatcatgagga 268
>ref|XM_702066.1| PREDICTED: Danio rerio similar to retinoblastoma-binding protein 6 isoform 2, transcript variant 5 (LOC572747), mRNA Length = 985 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 247 gggggagctgaagcggcagatcatgagga 275
>ref|XM_702065.1| PREDICTED: Danio rerio similar to retinoblastoma-binding protein 6 isoform 2, transcript variant 4 (LOC572747), mRNA Length = 870 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 247 gggggagctgaagcggcagatcatgagga 275
>ref|XM_702258.1| PREDICTED: Danio rerio similar to retinoblastoma-binding protein 6 isoform 3, transcript variant 3 (LOC572606), mRNA Length = 759 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 84 gggggagctgaagcggcagatcatgagga 112
>ref|XM_679026.1| PREDICTED: Danio rerio similar to retinoblastoma-binding protein 6 isoform 3, transcript variant 1 (LOC572606), mRNA Length = 818 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 84 gggggagctgaagcggcagatcatgagga 112
>ref|XM_702257.1| PREDICTED: Danio rerio similar to retinoblastoma-binding protein 6 isoform 3, transcript variant 2 (LOC572606), mRNA Length = 701 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 78 gggggagctgaagcggcagatcatgagga 106
>ref|XM_678816.1| PREDICTED: Danio rerio similar to retinoblastoma-binding protein 6 isoform 2, transcript variant 1 (LOC572595), mRNA Length = 998 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 260 gggggagctgaagcggcagatcatgagga 288
>ref|XM_702185.1| PREDICTED: Danio rerio similar to retinoblastoma-binding protein 6 isoform 2, transcript variant 4 (LOC572595), mRNA Length = 1059 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 260 gggggagctgaagcggcagatcatgagga 288
>ref|XM_702184.1| PREDICTED: Danio rerio similar to retinoblastoma-binding protein 6 isoform 2, transcript variant 3 (LOC572595), mRNA Length = 965 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 239 gggggagctgaagcggcagatcatgagga 267
>ref|XM_702183.1| PREDICTED: Danio rerio similar to retinoblastoma-binding protein 6 isoform 2, transcript variant 2 (LOC572595), mRNA Length = 883 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 260 gggggagctgaagcggcagatcatgagga 288
>ref|XM_690604.1| PREDICTED: Danio rerio similar to retinoblastoma-binding protein 6 isoform 3 (LOC573616), mRNA Length = 513 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 240 gggggagctgaagcggcagatcatgagga 268
>emb|BX005361.16| Zebrafish DNA sequence from clone DKEY-19C8 in linkage group 8, complete sequence Length = 222110 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 11586 gggggagctgaagcggcagatcatgagga 11558 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 45693 gggggagctgaagcggcagatcatgagga 45665 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 55719 gggggagctgaagcggcagatcatgagga 55691 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 116495 gggggagctgaagcggcagatcatgagga 116467 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 121205 gggggagctgaagcggcagatcatgagga 121177 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 149 agctgaagcggcagatcgtgagga 172 ||||||||||||||||| |||||| Sbjct: 71557 agctgaagcggcagatcatgagga 71534
>gb|AC159195.2| Mus musculus BAC clone RP23-467E1 from chromosome 13, complete sequence Length = 194915 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 349 ttggtagctgggagactgttc 369 ||||||||||||||||||||| Sbjct: 37744 ttggtagctgggagactgttc 37764
>emb|AL606669.4|OSJN00106 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0060E08, complete sequence Length = 166951 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 487 cagttgcagacttgcagtactcctg 511 ||||||||||||||||||| ||||| Sbjct: 138562 cagttgcagacttgcagtagtcctg 138538
>emb|BX908780.7| Zebrafish DNA sequence from clone CH211-198K9 in linkage group 1, complete sequence Length = 199679 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 15917 gggggagctgaagcggcagatcatgagga 15945 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 18627 gggggagctgaagcggcagatcatgagga 18655
>emb|BX247865.15| Zebrafish DNA sequence from clone CH211-205J13 in linkage group 8, complete sequence Length = 169286 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 3073 gggggagctgaagcggcagatcatgagga 3101 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 48503 gggggagctgaagcggcagatcatgagga 48531 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 106725 gggggagctgaagcggcagatcatgagga 106753 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 111437 gggggagctgaagcggcagatcatgagga 111465 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 144 ggggcagctgaagcggcagatcgtgagga 172 |||| ||||||||||||||||| |||||| Sbjct: 167672 gggggagctgaagcggcagatcatgagga 167700
>emb|CR621267.1| full-length cDNA clone CS0DI040YP22 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1379 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 40 agaagcaacacagaaagaaga 60 ||||||||||||||||||||| Sbjct: 10 agaagcaacacagaaagaaga 30
>emb|AL161668.6|CNS01RHB Human chromosome 14 DNA sequence BAC R-998D10 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 203363 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 40 agaagcaacacagaaagaaga 60 ||||||||||||||||||||| Sbjct: 52635 agaagcaacacagaaagaaga 52655
>emb|AL355922.4|CNS05TD4 Human chromosome 14 DNA sequence BAC R-84C10 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 157979 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 40 agaagcaacacagaaagaaga 60 ||||||||||||||||||||| Sbjct: 4157 agaagcaacacagaaagaaga 4137
>gb|AC007952.16| Homo sapiens chromosome 17, clone RP11-160E2, complete sequence Length = 154011 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 caagaagcaacacagaaaga 57 |||||||||||||||||||| Sbjct: 52649 caagaagcaacacagaaaga 52668
>ref|XM_001211804.1| Aspergillus terreus NIH2624 multiple RNA-binding domain-containing protein 1 (ATEG_02626) mRNA, complete cds Length = 2439 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 cgccgaggaacgacggcgcg 210 |||||||||||||||||||| Sbjct: 2016 cgccgaggaacgacggcgcg 2035
>gb|DQ641395.1| Dunaliella viridis hypothetical protein genes, complete cds Length = 29268 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 agaaggcaagaagcaacaca 51 |||||||||||||||||||| Sbjct: 4868 agaaggcaagaagcaacaca 4887
>gb|AC135424.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0015F11, complete sequence Length = 177574 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 486 gcagttgcagacttgcagta 505 |||||||||||||||||||| Sbjct: 42670 gcagttgcagacttgcagta 42689
>gb|AC135417.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1314_A05, complete sequence Length = 109853 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 486 gcagttgcagacttgcagta 505 |||||||||||||||||||| Sbjct: 70584 gcagttgcagacttgcagta 70603
>gb|AY754696.1| Zea mays brain protein 44-like mRNA, complete cds Length = 696 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 tgcagttgcagacttgcagt 504 |||||||||||||||||||| Sbjct: 32 tgcagttgcagacttgcagt 13
>ref|XM_590223.2| PREDICTED: Bos taurus similar to Zinc finger and SCAN domain containing protein 2 (Zinc finger protein 29) (Zfp-29) (LOC512668), mRNA Length = 3541 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 ggagaggaggccaccgctgaagag 143 |||||||||||||| ||||||||| Sbjct: 1108 ggagaggaggccacggctgaagag 1131
>gb|AC130611.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0483D07, complete sequence Length = 147122 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 487 cagttgcagacttgcagtac 506 |||||||||||||||||||| Sbjct: 126450 cagttgcagacttgcagtac 126469
>gb|BC067220.1| Homo sapiens cDNA clone MGC:71974 IMAGE:30321681, complete cds Length = 1309 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 167 tgaggaccatcagcaacctcatgg 190 ||||||||||||||||| |||||| Sbjct: 85 tgaggaccatcagcaacttcatgg 62
>gb|AC106017.11| Homo sapiens chromosome 17, clone RP11-744A16, complete sequence Length = 178625 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 caagaagcaacacagaaaga 57 |||||||||||||||||||| Sbjct: 69683 caagaagcaacacagaaaga 69664 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 caagaagcaacacagaaaga 57 |||||||||||||||||||| Sbjct: 88360 caagaagcaacacagaaaga 88379
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 acgacggcgcgggcgcggat 219 |||||||||||||||||||| Sbjct: 1365754 acgacggcgcgggcgcggat 1365773
>emb|BX511265.13| Zebrafish DNA sequence from clone RP71-45G20 in linkage group 9, complete sequence Length = 183988 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 agctgaagcggcagatcgtgagga 172 ||||||||||||||||| |||||| Sbjct: 56781 agctgaagcggcagatcatgagga 56804 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 agctgaagcggcagatcgtgagga 172 ||||||||||||||||| |||||| Sbjct: 108402 agctgaagcggcagatcatgagga 108425 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 agctgaagcggcagatcgtgagga 172 ||||||||||||||||| |||||| Sbjct: 142864 agctgaagcggcagatcatgagga 142887
>gb|AC079935.3| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBa0095C06, from Chromosome 10, complete sequence Length = 156159 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 tgcagttgcagacttgcagt 504 |||||||||||||||||||| Sbjct: 53213 tgcagttgcagacttgcagt 53194
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 489 gttgcagacttgcagtactc 508 |||||||||||||||||||| Sbjct: 4891728 gttgcagacttgcagtactc 4891747
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 tgcagttgcagacttgcagt 504 |||||||||||||||||||| Sbjct: 11469220 tgcagttgcagacttgcagt 11469201
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 480 tcacctgcagttgcagacttgcag 503 |||| ||||||||||||||||||| Sbjct: 9365838 tcacatgcagttgcagacttgcag 9365861
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 484 ctgcagttgcagacttgcag 503 |||||||||||||||||||| Sbjct: 55681 ctgcagttgcagacttgcag 55662 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 tgcagttgcagacttgcagt 504 |||||||||||||||||||| Sbjct: 25301862 tgcagttgcagacttgcagt 25301843
>ref|XM_702064.1| PREDICTED: Danio rerio similar to retinoblastoma-binding protein 6 isoform 2, transcript variant 3 (LOC572747), mRNA Length = 938 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 agctgaagcggcagatcgtgagga 172 ||||||||||||||||| |||||| Sbjct: 225 agctgaagcggcagatcatgagga 248
>ref|XM_702063.1| PREDICTED: Danio rerio similar to retinoblastoma-binding protein 6 isoform 2, transcript variant 2 (LOC572747), mRNA Length = 914 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 agctgaagcggcagatcgtgagga 172 ||||||||||||||||| |||||| Sbjct: 199 agctgaagcggcagatcatgagga 222
>ref|XM_677707.1| PREDICTED: Danio rerio similar to retinoblastoma-binding protein 6 isoform 3, transcript variant 1 (LOC556970), mRNA Length = 999 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 agctgaagcggcagatcgtgagga 172 ||||||||||||||||| |||||| Sbjct: 266 agctgaagcggcagatcatgagga 289
>ref|XM_701622.1| PREDICTED: Danio rerio similar to retinoblastoma-binding protein 6 isoform 3, transcript variant 2 (LOC556970), mRNA Length = 818 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 agctgaagcggcagatcgtgagga 172 ||||||||||||||||| |||||| Sbjct: 245 agctgaagcggcagatcatgagga 268
>ref|XM_695248.1| PREDICTED: Danio rerio similar to retinoblastoma-binding protein 6 isoform 2 (LOC571643), mRNA Length = 1049 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 agctgaagcggcagatcgtgagga 172 ||||||||||||||||| |||||| Sbjct: 244 agctgaagcggcagatcatgagga 267
>emb|AL353137.7| Human DNA sequence from clone RP11-272G11 on chromosome 9 Contains a ribosomal protein S15a (RPS15A) pseudogene, complete sequence Length = 109393 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 aacacagaaagaagagccat 65 |||||||||||||||||||| Sbjct: 34395 aacacagaaagaagagccat 34376
>gb|AC139138.2| Homo sapiens chromosome 17, clone XXfos-82524G9, complete sequence Length = 41839 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 caagaagcaacacagaaaga 57 |||||||||||||||||||| Sbjct: 32378 caagaagcaacacagaaaga 32359
>emb|BX908800.10| Zebrafish DNA sequence from clone DKEY-220E7 in linkage group 18, complete sequence Length = 90728 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 149 agctgaagcggcagatcgtgagga 172 ||||||||||||||||| |||||| Sbjct: 12309 agctgaagcggcagatcatgagga 12286
>emb|AL592048.5| Zebrafish DNA sequence from clone BUSM1-241H12 in linkage group 18, complete sequence Length = 103102 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 149 agctgaagcggcagatcgtgagga 172 ||||||||||||||||| |||||| Sbjct: 24394 agctgaagcggcagatcatgagga 24371
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 513 tttcttcacaacgctataatctgg 536 ||||| |||||||||||||||||| Sbjct: 3017015 tttctccacaacgctataatctgg 3017038
>gb|AC013442.11| Homo sapiens BAC clone RP11-387M19 from 2, complete sequence Length = 115484 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 60 agccatggagcactcctacagcaa 83 |||||||||||||| ||||||||| Sbjct: 72705 agccatggagcactgctacagcaa 72682
>emb|CR380839.1|PTB083D21 Pan troglodytes chromosome X BAC PTB-083D21, complete sequence Length = 186291 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 140 agagggggcagctgaagcggcaga 163 |||||||||||||||||| ||||| Sbjct: 184729 agagggggcagctgaagccgcaga 184752
>dbj|AP005813.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0676F10 Length = 142510 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 480 tcacctgcagttgcagacttgcag 503 |||| ||||||||||||||||||| Sbjct: 133179 tcacatgcagttgcagacttgcag 133202
>dbj|AP003044.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0038C05 Length = 152941 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 480 tcacctgcagttgcagacttgcag 503 |||| ||||||||||||||||||| Sbjct: 94248 tcacatgcagttgcagacttgcag 94271
>dbj|AP006452.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1250G12 Length = 144590 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 tgcagttgcagacttgcagt 504 |||||||||||||||||||| Sbjct: 69013 tgcagttgcagacttgcagt 68994
>dbj|AP005873.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1370C05 Length = 148271 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 484 ctgcagttgcagacttgcag 503 |||||||||||||||||||| Sbjct: 50290 ctgcagttgcagacttgcag 50271
>dbj|AP004187.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1435_F07 Length = 139041 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 484 ctgcagttgcagacttgcag 503 |||||||||||||||||||| Sbjct: 4708 ctgcagttgcagacttgcag 4689
>dbj|AK061115.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-E03, full insert sequence Length = 1070 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 484 ctgcagttgcagacttgcag 503 |||||||||||||||||||| Sbjct: 3 ctgcagttgcagacttgcag 22
>emb|AL713953.3|CNS07YPY Oryza sativa chromosome 12, . BAC OJ1134_A05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 120825 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 gttgcagacttgcagtactc 508 |||||||||||||||||||| Sbjct: 46694 gttgcagacttgcagtactc 46675
>emb|CT009602.4| PTB-121B21, complete sequence Length = 236109 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 140 agagggggcagctgaagcggcaga 163 |||||||||||||||||| ||||| Sbjct: 47295 agagggggcagctgaagccgcaga 47318
>ref|NM_002411.1| Homo sapiens secretoglobin, family 2A, member 2 (SCGB2A2), mRNA gb|U33147.1|HSU33147 Human mammaglobin mRNA, complete cds Length = 503 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 167 tgaggaccatcagcaacctcatgg 190 ||||||||||||||||| |||||| Sbjct: 82 tgaggaccatcagcaacttcatgg 59
>gb|AF015224.1|AF015224 Homo sapiens mammaglobin gene, complete cds Length = 4206 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 167 tgaggaccatcagcaacctcatgg 190 ||||||||||||||||| |||||| Sbjct: 1077 tgaggaccatcagcaacttcatgg 1054
>emb|BX536967.2|CNS09SBH Oryza sativa chromosome 12, . BAC OSJNBa0029N15 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141053 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 gttgcagacttgcagtactc 508 |||||||||||||||||||| Sbjct: 68231 gttgcagacttgcagtactc 68212
>emb|CR956373.10| Pig DNA sequence from clone CH242-69F10 on chromosome 17, complete sequence Length = 189898 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 tcaaaggagaggaggccacc 134 |||||||||||||||||||| Sbjct: 176697 tcaaaggagaggaggccacc 176716
>emb|AL928706.6| Mouse DNA sequence from clone RP23-54E16 on chromosome 2, complete sequence Length = 205358 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 tgattagctttttagtactg 343 |||||||||||||||||||| Sbjct: 129401 tgattagctttttagtactg 129420
>emb|AL845548.7| Mouse DNA sequence from clone RP23-307N14 on chromosome 2, complete sequence Length = 142263 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 tgattagctttttagtactg 343 |||||||||||||||||||| Sbjct: 127400 tgattagctttttagtactg 127381
>dbj|AP003306.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-703H8, complete sequences Length = 173348 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 167 tgaggaccatcagcaacctcatgg 190 ||||||||||||||||| |||||| Sbjct: 77822 tgaggaccatcagcaacttcatgg 77799 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 94,541,694 Number of extensions: 5069755 Number of successful extensions: 90850 Number of sequences better than 10.0: 129 Number of HSP's gapped: 90850 Number of HSP's successfully gapped: 171 Length of query: 625 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 603 Effective length of database: 18,508,616,841 Effective search space: 11160695955123 Effective search space used: 11160695955123 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
