| Clone Name | FLbaf29n11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF104108.1| Triticum aestivum small heat shock protein Hsp23.6 mRNA, nuclear gene encoding mitochondrial protein, complete cds Length = 988 Score = 745 bits (376), Expect = 0.0 Identities = 580/647 (89%), Gaps = 27/647 (4%) Strand = Plus / Plus Query: 127 cgcgccggccagcctcctcatgtccggcgctcccgtggccttctgcccccacaacaccac 186 |||||||||||||||||||| |||||| ||||||||||||||| || | | || || | Sbjct: 103 cgcgccggccagcctcctcaagtccggtgctcccgtggccttccgctcggtccactcccc 162 Query: 187 cgccgtcatcgccgaccgccgcccgtacaacaccctggtcaaggaggccatccgctacga 246 |||||||| ||||| |||||||||||||||||||| || |||||||| || ||||||||| Sbjct: 163 cgccgtcaccgccgcccgccgcccgtacaacacccaggccaaggaggtcagccgctacga 222 Query: 247 cgacga---------ccacagcggccgcgacctcgtcatccccagcttcatctcgcagga 297 |||||| | |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 223 cgacgacgacgacgactacagcggccgcgacctcgtcatccccagcttcttctcgcagga 282 Query: 298 cgtgctcgacccgctcggcgcgccgaccagcatggcccgtctgctgtctctgatggaaga 357 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 283 cgtgatcgacccgctcggcgcgccgaccagcatggcccgtctgctgtctctgatggagga 342 Query: 358 cgtctcaactcagaccggc---ctgtcctccactgctggggc------gtcgcgcctcgg 408 |||| || ||||||||||| || ||||||||||||||||| |||||| ||||| Sbjct: 343 cgtcgcatctcagaccggcggcctctcctccactgctggggctggcgcgtcgcggctcgg 402 Query: 409 acgctgggtggccaaggaggacgacggcgcggtgtacctcaaggtgccgatgccggggct 468 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 403 acgctgggtggccaaggaggacgacgacgcggtgtacctcaaggtgccgatgccggggct 462 Query: 469 gaccaaggagcacgtccaggtgcgcgcggacaagaacatcctggtgatcaagggcgaggg 528 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 463 gaccaaggagcacgtggaggtgcgcgcggacaagaacatcctggtgatcaagggcgaggg 522 Query: 529 cgagaagcagccctgggccgg---cgacgacgactccgcggtgccgaggtacaaccaccg 585 ||||||||||||||||| ||| ||||||||||||||||||||||| |||||||| ||| Sbjct: 523 cgagaagcagccctgggacggcgacgacgacgactccgcggtgccgaagtacaaccgccg 582 Query: 586 catcgagatcccc---gctgacgcctacaagatggacaagatcaaggctgagatgaagaa 642 ||||||| | ||| |||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 583 catcgaggtgccctctgctgacgcgtacaagatggacaagatcaaggccgagatgaagaa 642 Query: 643 tggcatgctctgggtcaccctgctcaagctgaaggaggaggagcgcaaggacgtcttcca 702 ||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 643 cggcgtgctctgggtcaccctgctcaaggtcaaggaggaggagcgcaaggacgtcttcca 702 Query: 703 cgtcaaggtcgagtagtcctggtg---gtggtactgctcatggagga 746 |||||||||||||||||||| ||| |||||| ||||||||||||| Sbjct: 703 cgtcaaggtcgagtagtccttgtggatgtggtagtgctcatggagga 749 Score = 107 bits (54), Expect = 7e-20 Identities = 86/94 (91%), Gaps = 2/94 (2%) Strand = Plus / Plus Query: 867 gaactctgttagtttcctctatgttcggcatgtgatgaacttgctttggtggtgaaattg 926 |||||||| |||||||||| | ||| ||||| ||||||||| | |||||||||||||||| Sbjct: 861 gaactctgatagtttcctcaa-gtttggcatatgatgaact-gatttggtggtgaaattg 918 Query: 927 gtcatgaaattctgttgatttcctcaagtttggc 960 ||||||||||||||||||||||||||| |||||| Sbjct: 919 gtcatgaaattctgttgatttcctcaaatttggc 952 Score = 91.7 bits (46), Expect = 4e-15 Identities = 77/86 (89%), Gaps = 1/86 (1%) Strand = Plus / Plus Query: 745 gagagtctgagagacgccttgttgatgtggtcatgttttggtgtctttcttccttgtttt 804 |||||| ||||||| ||| |||| |||||||||||||| ||||||||||||||||||||| Sbjct: 760 gagagtgtgagagatgccctgtttatgtggtcatgttt-ggtgtctttcttccttgtttt 818 Query: 805 gtttccttgagcgtcttggatcgagt 830 | ||| |||| ||||||| ||||||| Sbjct: 819 gcttcgttgatcgtcttgcatcgagt 844 Score = 48.1 bits (24), Expect = 0.060 Identities = 27/28 (96%) Strand = Plus / Plus Query: 96 ccatggcttccgccgtcgcttgcaaggg 123 |||||||||||||||||| ||||||||| Sbjct: 66 ccatggcttccgccgtcgattgcaaggg 93
>ref|NM_001063697.1| Oryza sativa (japonica cultivar-group) Os06g0219500 (Os06g0219500) mRNA, complete cds Length = 747 Score = 214 bits (108), Expect = 4e-52 Identities = 257/306 (83%), Gaps = 3/306 (0%) Strand = Plus / Plus Query: 413 tgggtggccaaggaggacgacggcgcggtgtacctcaaggtgccgatgccggggctgacc 472 |||||||| ||||||||||||| ||||||| |||||||||| ||||||| |||||| Sbjct: 445 tgggtggcgaaggaggacgacgacgcggtgcacctcaaggtctcgatgcccgggctgggg 504 Query: 473 aaggagcacgtccaggtgcgcgcggacaagaacatcctggtgatcaagggcgagggcgag 532 ||||||||||| ||||| | ||||| |||||| ||||||||||||||||||||| ||| Sbjct: 505 aaggagcacgtgaaggtgtgggcggagcagaacagcctggtgatcaagggcgagggggag 564 Query: 533 aagcagccctgggccggcgacgacgactccgcggtgccgaggtacaaccaccgcatcgag 592 ||| | || || | ||||| |||| ||||| |||| | |||| || |||||||||| Sbjct: 565 aaggaccc---ggaggacgacgccgacgccgcgccgccgcgctacacccgccgcatcgag 621 Query: 593 atccccgctgacgcctacaagatggacaagatcaaggctgagatgaagaatggcatgctc 652 ||||||| ||||| | ||| ||||||||||||||||| ||||||||||| ||| ||||| Sbjct: 622 ctccccgccgacgcgttcaaaatggacaagatcaaggcggagatgaagaacggcgtgctc 681 Query: 653 tgggtcaccctgctcaagctgaaggaggaggagcgcaaggacgtcttccacgtcaaggtc 712 |||| || ||| |||||| ||||||||||||||||||||||||||||| ||||| ||| Sbjct: 682 agggtggccgtgcccaagctcaaggaggaggagcgcaaggacgtcttccaggtcaatgtc 741 Query: 713 gagtag 718 |||||| Sbjct: 742 gagtag 747 Score = 56.0 bits (28), Expect = 2e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 296 gacgtgctcgacccgctcggcgcgccgaccagcatggcccgtctgctgtctctgatggaa 355 ||||||||||||||| ||||||||||||| ||| ||| || |||||| | |||||||| Sbjct: 310 gacgtgctcgacccgttcggcgcgccgacgagcctgggacgactgctggccctgatggag 369 Query: 356 gacg 359 |||| Sbjct: 370 gacg 373
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 214 bits (108), Expect = 4e-52 Identities = 257/306 (83%), Gaps = 3/306 (0%) Strand = Plus / Minus Query: 413 tgggtggccaaggaggacgacggcgcggtgtacctcaaggtgccgatgccggggctgacc 472 |||||||| ||||||||||||| ||||||| |||||||||| ||||||| |||||| Sbjct: 6163457 tgggtggcgaaggaggacgacgacgcggtgcacctcaaggtctcgatgcccgggctgggg 6163398 Query: 473 aaggagcacgtccaggtgcgcgcggacaagaacatcctggtgatcaagggcgagggcgag 532 ||||||||||| ||||| | ||||| |||||| ||||||||||||||||||||| ||| Sbjct: 6163397 aaggagcacgtgaaggtgtgggcggagcagaacagcctggtgatcaagggcgagggggag 6163338 Query: 533 aagcagccctgggccggcgacgacgactccgcggtgccgaggtacaaccaccgcatcgag 592 ||| | || || | ||||| |||| ||||| |||| | |||| || |||||||||| Sbjct: 6163337 aaggaccc---ggaggacgacgccgacgccgcgccgccgcgctacacccgccgcatcgag 6163281 Query: 593 atccccgctgacgcctacaagatggacaagatcaaggctgagatgaagaatggcatgctc 652 ||||||| ||||| | ||| ||||||||||||||||| ||||||||||| ||| ||||| Sbjct: 6163280 ctccccgccgacgcgttcaaaatggacaagatcaaggcggagatgaagaacggcgtgctc 6163221 Query: 653 tgggtcaccctgctcaagctgaaggaggaggagcgcaaggacgtcttccacgtcaaggtc 712 |||| || ||| |||||| ||||||||||||||||||||||||||||| ||||| ||| Sbjct: 6163220 agggtggccgtgcccaagctcaaggaggaggagcgcaaggacgtcttccaggtcaatgtc 6163161 Query: 713 gagtag 718 |||||| Sbjct: 6163160 gagtag 6163155 Score = 56.0 bits (28), Expect = 2e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 296 gacgtgctcgacccgctcggcgcgccgaccagcatggcccgtctgctgtctctgatggaa 355 ||||||||||||||| ||||||||||||| ||| ||| || |||||| | |||||||| Sbjct: 6163592 gacgtgctcgacccgttcggcgcgccgacgagcctgggacgactgctggccctgatggag 6163533 Query: 356 gacg 359 |||| Sbjct: 6163532 gacg 6163529
>dbj|AP003488.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0436F11 Length = 165550 Score = 214 bits (108), Expect = 4e-52 Identities = 257/306 (83%), Gaps = 3/306 (0%) Strand = Plus / Minus Query: 413 tgggtggccaaggaggacgacggcgcggtgtacctcaaggtgccgatgccggggctgacc 472 |||||||| ||||||||||||| ||||||| |||||||||| ||||||| |||||| Sbjct: 77276 tgggtggcgaaggaggacgacgacgcggtgcacctcaaggtctcgatgcccgggctgggg 77217 Query: 473 aaggagcacgtccaggtgcgcgcggacaagaacatcctggtgatcaagggcgagggcgag 532 ||||||||||| ||||| | ||||| |||||| ||||||||||||||||||||| ||| Sbjct: 77216 aaggagcacgtgaaggtgtgggcggagcagaacagcctggtgatcaagggcgagggggag 77157 Query: 533 aagcagccctgggccggcgacgacgactccgcggtgccgaggtacaaccaccgcatcgag 592 ||| | || || | ||||| |||| ||||| |||| | |||| || |||||||||| Sbjct: 77156 aaggaccc---ggaggacgacgccgacgccgcgccgccgcgctacacccgccgcatcgag 77100 Query: 593 atccccgctgacgcctacaagatggacaagatcaaggctgagatgaagaatggcatgctc 652 ||||||| ||||| | ||| ||||||||||||||||| ||||||||||| ||| ||||| Sbjct: 77099 ctccccgccgacgcgttcaaaatggacaagatcaaggcggagatgaagaacggcgtgctc 77040 Query: 653 tgggtcaccctgctcaagctgaaggaggaggagcgcaaggacgtcttccacgtcaaggtc 712 |||| || ||| |||||| ||||||||||||||||||||||||||||| ||||| ||| Sbjct: 77039 agggtggccgtgcccaagctcaaggaggaggagcgcaaggacgtcttccaggtcaatgtc 76980 Query: 713 gagtag 718 |||||| Sbjct: 76979 gagtag 76974 Score = 56.0 bits (28), Expect = 2e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 296 gacgtgctcgacccgctcggcgcgccgaccagcatggcccgtctgctgtctctgatggaa 355 ||||||||||||||| ||||||||||||| ||| ||| || |||||| | |||||||| Sbjct: 77411 gacgtgctcgacccgttcggcgcgccgacgagcctgggacgactgctggccctgatggag 77352 Query: 356 gacg 359 |||| Sbjct: 77351 gacg 77348
>dbj|AK064012.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-H01, full insert sequence Length = 1794 Score = 194 bits (98), Expect = 4e-46 Identities = 244/292 (83%), Gaps = 3/292 (1%) Strand = Plus / Plus Query: 427 ggacgacggcgcggtgtacctcaaggtgccgatgccggggctgaccaaggagcacgtcca 486 |||||||| ||||||| |||||||||| ||||||| |||||| ||||||||||| | Sbjct: 1194 ggacgacgacgcggtgcacctcaaggtctcgatgcccgggctggggaaggagcacgtgaa 1253 Query: 487 ggtgcgcgcggacaagaacatcctggtgatcaagggcgagggcgagaagcagccctgggc 546 |||| | ||||| |||||| ||||||||||||||||||||| |||||| | || || Sbjct: 1254 ggtgtgggcggagcagaacagcctggtgatcaagggcgagggggagaaggaccc---gga 1310 Query: 547 cggcgacgacgactccgcggtgccgaggtacaaccaccgcatcgagatccccgctgacgc 606 | ||||| |||| ||||| |||| | |||| || |||||||||| ||||||| ||||| Sbjct: 1311 ggacgacgccgacgccgcgccgccgcgctacacccgccgcatcgagctccccgccgacgc 1370 Query: 607 ctacaagatggacaagatcaaggctgagatgaagaatggcatgctctgggtcaccctgct 666 | ||| ||||||||||||||||| ||||||||||| ||| ||||| |||| || ||| Sbjct: 1371 gttcaaaatggacaagatcaaggcggagatgaagaacggcgtgctcagggtggccgtgcc 1430 Query: 667 caagctgaaggaggaggagcgcaaggacgtcttccacgtcaaggtcgagtag 718 |||||| ||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 1431 caagctcaaggaggaggagcgcaaggacgtcttccaggtcaatgtcgagtag 1482 Score = 50.1 bits (25), Expect = 0.015 Identities = 28/29 (96%) Strand = Plus / Plus Query: 296 gacgtgctcgacccgctcggcgcgccgac 324 ||||||||||||||| ||||||||||||| Sbjct: 1158 gacgtgctcgacccgttcggcgcgccgac 1186
>gb|AY108320.1| Zea mays PCO111660 mRNA sequence Length = 1002 Score = 89.7 bits (45), Expect = 2e-14 Identities = 93/109 (85%) Strand = Plus / Plus Query: 610 caagatggacaagatcaaggctgagatgaagaatggcatgctctgggtcaccctgctcaa 669 |||||||||| ||||||||||||| |||||||| ||| ||||| |||||||| | | || Sbjct: 610 caagatggaccagatcaaggctgacatgaagaacggcgtgctcagggtcaccgtcccgaa 669 Query: 670 gctgaaggaggaggagcgcaaggacgtcttccacgtcaaggtcgagtag 718 | | ||||| ||||||||||||||||||||| | ||||| |||||||| Sbjct: 670 gatcaaggacgaggagcgcaaggacgtcttcgagatcaagatcgagtag 718 Score = 60.0 bits (30), Expect = 2e-05 Identities = 87/106 (82%) Strand = Plus / Plus Query: 422 aaggaggacgacggcgcggtgtacctcaaggtgccgatgccggggctgaccaaggagcac 481 |||||||| | || ||||||| | || ||||||||||||||||||||| ||||||||| Sbjct: 425 aaggaggatggcgacgcggtgcagctgaaggtgccgatgccggggctggggaaggagcac 484 Query: 482 gtccaggtgcgcgcggacaagaacatcctggtgatcaagggcgagg 527 || || |||| | ||| ||| || ||||||||||||||| |||| Sbjct: 485 gtgaagatgcgggtggagaaggacgccctggtgatcaagggggagg 530
>emb|CT831883.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA049E08, full insert sequence Length = 861 Score = 85.7 bits (43), Expect = 3e-13 Identities = 94/111 (84%) Strand = Plus / Plus Query: 608 tacaagatggacaagatcaaggctgagatgaagaatggcatgctctgggtcaccctgctc 667 |||| ||||||| |||||||||| ||||||||||| ||| ||||| ||| | ||| | Sbjct: 618 tacaggatggaccagatcaaggcggagatgaagaacggcgtgctcaaggtggtcgtgccc 677 Query: 668 aagctgaaggaggaggagcgcaaggacgtcttccacgtcaaggtcgagtag 718 ||| ||||||||||| |||||| |||||||||||| ||||| ||||||||| Sbjct: 678 aaggtgaaggaggagcagcgcagggacgtcttccaggtcaacgtcgagtag 728 Score = 54.0 bits (27), Expect = 0.001 Identities = 54/63 (85%) Strand = Plus / Plus Query: 473 aaggagcacgtccaggtgcgcgcggacaagaacatcctggtgatcaagggcgagggcgag 532 ||||||||||| ||||| | ||||| |||||| ||| ||||||||||||||||| ||| Sbjct: 486 aaggagcacgtgaaggtgtgggcggagcagaacagcctcgtgatcaagggcgagggggag 545 Query: 533 aag 535 ||| Sbjct: 546 aag 548
>ref|NM_001054710.1| Oryza sativa (japonica cultivar-group) Os02g0758000 (Os02g0758000) mRNA, complete cds Length = 1443 Score = 85.7 bits (43), Expect = 3e-13 Identities = 94/111 (84%) Strand = Plus / Plus Query: 608 tacaagatggacaagatcaaggctgagatgaagaatggcatgctctgggtcaccctgctc 667 |||| ||||||| |||||||||| ||||||||||| ||| ||||| ||| | ||| | Sbjct: 614 tacaggatggaccagatcaaggcggagatgaagaacggcgtgctcaaggtggtcgtgccc 673 Query: 668 aagctgaaggaggaggagcgcaaggacgtcttccacgtcaaggtcgagtag 718 ||| ||||||||||| |||||| |||||||||||| ||||| ||||||||| Sbjct: 674 aaggtgaaggaggagcagcgcagggacgtcttccaggtcaacgtcgagtag 724 Score = 54.0 bits (27), Expect = 0.001 Identities = 54/63 (85%) Strand = Plus / Plus Query: 473 aaggagcacgtccaggtgcgcgcggacaagaacatcctggtgatcaagggcgagggcgag 532 ||||||||||| ||||| | ||||| |||||| ||| ||||||||||||||||| ||| Sbjct: 482 aaggagcacgtgaaggtgtgggcggagcagaacagcctcgtgatcaagggcgagggggag 541 Query: 533 aag 535 ||| Sbjct: 542 aag 544
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 85.7 bits (43), Expect = 3e-13 Identities = 94/111 (84%) Strand = Plus / Plus Query: 608 tacaagatggacaagatcaaggctgagatgaagaatggcatgctctgggtcaccctgctc 667 |||| ||||||| |||||||||| ||||||||||| ||| ||||| ||| | ||| | Sbjct: 31940071 tacaggatggaccagatcaaggcggagatgaagaacggcgtgctcaaggtggtcgtgccc 31940130 Query: 668 aagctgaaggaggaggagcgcaaggacgtcttccacgtcaaggtcgagtag 718 ||| ||||||||||| |||||| |||||||||||| ||||| ||||||||| Sbjct: 31940131 aaggtgaaggaggagcagcgcagggacgtcttccaggtcaacgtcgagtag 31940181 Score = 54.0 bits (27), Expect = 0.001 Identities = 54/63 (85%) Strand = Plus / Plus Query: 473 aaggagcacgtccaggtgcgcgcggacaagaacatcctggtgatcaagggcgagggcgag 532 ||||||||||| ||||| | ||||| |||||| ||| ||||||||||||||||| ||| Sbjct: 31939939 aaggagcacgtgaaggtgtgggcggagcagaacagcctcgtgatcaagggcgagggggag 31939998 Query: 533 aag 535 ||| Sbjct: 31939999 aag 31940001
>dbj|AP004814.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0471A11 Length = 157740 Score = 85.7 bits (43), Expect = 3e-13 Identities = 94/111 (84%) Strand = Plus / Plus Query: 608 tacaagatggacaagatcaaggctgagatgaagaatggcatgctctgggtcaccctgctc 667 |||| ||||||| |||||||||| ||||||||||| ||| ||||| ||| | ||| | Sbjct: 101072 tacaggatggaccagatcaaggcggagatgaagaacggcgtgctcaaggtggtcgtgccc 101131 Query: 668 aagctgaaggaggaggagcgcaaggacgtcttccacgtcaaggtcgagtag 718 ||| ||||||||||| |||||| |||||||||||| ||||| ||||||||| Sbjct: 101132 aaggtgaaggaggagcagcgcagggacgtcttccaggtcaacgtcgagtag 101182 Score = 54.0 bits (27), Expect = 0.001 Identities = 54/63 (85%) Strand = Plus / Plus Query: 473 aaggagcacgtccaggtgcgcgcggacaagaacatcctggtgatcaagggcgagggcgag 532 ||||||||||| ||||| | ||||| |||||| ||| ||||||||||||||||| ||| Sbjct: 100940 aaggagcacgtgaaggtgtgggcggagcagaacagcctcgtgatcaagggcgagggggag 100999 Query: 533 aag 535 ||| Sbjct: 101000 aag 101002
>dbj|AK105464.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-126-A02, full insert sequence Length = 1110 Score = 85.7 bits (43), Expect = 3e-13 Identities = 94/111 (84%) Strand = Plus / Plus Query: 608 tacaagatggacaagatcaaggctgagatgaagaatggcatgctctgggtcaccctgctc 667 |||| ||||||| |||||||||| ||||||||||| ||| ||||| ||| | ||| | Sbjct: 620 tacaggatggaccagatcaaggcggagatgaagaacggcgtgctcaaggtggtcgtgccc 679 Query: 668 aagctgaaggaggaggagcgcaaggacgtcttccacgtcaaggtcgagtag 718 ||| ||||||||||| |||||| |||||||||||| ||||| ||||||||| Sbjct: 680 aaggtgaaggaggagcagcgcagggacgtcttccaggtcaacgtcgagtag 730 Score = 54.0 bits (27), Expect = 0.001 Identities = 54/63 (85%) Strand = Plus / Plus Query: 473 aaggagcacgtccaggtgcgcgcggacaagaacatcctggtgatcaagggcgagggcgag 532 ||||||||||| ||||| | ||||| |||||| ||| ||||||||||||||||| ||| Sbjct: 488 aaggagcacgtgaaggtgtgggcggagcagaacagcctcgtgatcaagggcgagggggag 547 Query: 533 aag 535 ||| Sbjct: 548 aag 550
>dbj|AK074003.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076P21, full insert sequence Length = 865 Score = 85.7 bits (43), Expect = 3e-13 Identities = 94/111 (84%) Strand = Plus / Plus Query: 608 tacaagatggacaagatcaaggctgagatgaagaatggcatgctctgggtcaccctgctc 667 |||| ||||||| |||||||||| ||||||||||| ||| ||||| ||| | ||| | Sbjct: 615 tacaggatggaccagatcaaggcggagatgaagaacggcgtgctcaaggtggtcgtgccc 674 Query: 668 aagctgaaggaggaggagcgcaaggacgtcttccacgtcaaggtcgagtag 718 ||| ||||||||||| |||||| |||||||||||| ||||| ||||||||| Sbjct: 675 aaggtgaaggaggagcagcgcagggacgtcttccaggtcaacgtcgagtag 725 Score = 54.0 bits (27), Expect = 0.001 Identities = 54/63 (85%) Strand = Plus / Plus Query: 473 aaggagcacgtccaggtgcgcgcggacaagaacatcctggtgatcaagggcgagggcgag 532 ||||||||||| ||||| | ||||| |||||| ||| ||||||||||||||||| ||| Sbjct: 483 aaggagcacgtgaaggtgtgggcggagcagaacagcctcgtgatcaagggcgagggggag 542 Query: 533 aag 535 ||| Sbjct: 543 aag 545
>dbj|AK064389.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-F07, full insert sequence Length = 1442 Score = 85.7 bits (43), Expect = 3e-13 Identities = 94/111 (84%) Strand = Plus / Plus Query: 608 tacaagatggacaagatcaaggctgagatgaagaatggcatgctctgggtcaccctgctc 667 |||| ||||||| |||||||||| ||||||||||| ||| ||||| ||| | ||| | Sbjct: 614 tacaggatggaccagatcaaggcggagatgaagaacggcgtgctcaaggtggtcgtgccc 673 Query: 668 aagctgaaggaggaggagcgcaaggacgtcttccacgtcaaggtcgagtag 718 ||| ||||||||||| |||||| |||||||||||| ||||| ||||||||| Sbjct: 674 aaggtgaaggaggagcagcgcagggacgtcttccaggtcaacgtcgagtag 724 Score = 54.0 bits (27), Expect = 0.001 Identities = 54/63 (85%) Strand = Plus / Plus Query: 473 aaggagcacgtccaggtgcgcgcggacaagaacatcctggtgatcaagggcgagggcgag 532 ||||||||||| ||||| | ||||| |||||| ||| ||||||||||||||||| ||| Sbjct: 482 aaggagcacgtgaaggtgtgggcggagcagaacagcctcgtgatcaagggcgagggggag 541 Query: 533 aag 535 ||| Sbjct: 542 aag 544
>gb|BT016320.1| Zea mays clone Contig153 mRNA sequence Length = 979 Score = 77.8 bits (39), Expect = 7e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 473 aaggagcacgtccaggtgcgcgcggacaagaacatcctggtgatcaagggcgagggcgag 532 |||||||||||| ||||| | ||||| |||||| ||||||||||||||||||||||||| Sbjct: 498 aaggagcacgtcaaggtgtgggcggagcagaacagcctggtgatcaagggcgagggcgag 557 Query: 533 aag 535 ||| Sbjct: 558 aag 560 Score = 77.8 bits (39), Expect = 7e-11 Identities = 93/111 (83%) Strand = Plus / Plus Query: 608 tacaagatggacaagatcaaggctgagatgaagaatggcatgctctgggtcaccctgctc 667 |||| |||||||||||||||||| ||||||||||| ||| ||||| ||| | ||| Sbjct: 630 tacaggatggacaagatcaaggcggagatgaagaacggcgtgctcaaggtggtcgtgccg 689 Query: 668 aagctgaaggaggaggagcgcaaggacgtcttccacgtcaaggtcgagtag 718 ||| |||||||| || ||||||||||||| ||||| ||||| ||||||||| Sbjct: 690 aaggtgaaggagcagcagcgcaaggacgtgttccaagtcaacgtcgagtag 740
>gb|AY758275.1| Zea mays mitochondrial small heat shock protein 22 (hsp22) gene, complete cds; nuclear gene for mitochondrial product Length = 791 Score = 77.8 bits (39), Expect = 7e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 473 aaggagcacgtccaggtgcgcgcggacaagaacatcctggtgatcaagggcgagggcgag 532 |||||||||||| ||||| | ||||| |||||| ||||||||||||||||||||||||| Sbjct: 549 aaggagcacgtcaaggtgtgggcggagcagaacagcctggtgatcaagggcgagggcgag 608 Query: 533 aag 535 ||| Sbjct: 609 aag 611 Score = 77.8 bits (39), Expect = 7e-11 Identities = 93/111 (83%) Strand = Plus / Plus Query: 608 tacaagatggacaagatcaaggctgagatgaagaatggcatgctctgggtcaccctgctc 667 |||| |||||||||||||||||| ||||||||||| ||| ||||| ||| | ||| Sbjct: 681 tacaggatggacaagatcaaggcggagatgaagaacggcgtgctcaaggtggtcgtgccg 740 Query: 668 aagctgaaggaggaggagcgcaaggacgtcttccacgtcaaggtcgagtag 718 ||| |||||||| || ||||||||||||| ||||| ||||| ||||||||| Sbjct: 741 aaggtgaaggagcagcagcgcaaggacgtgttccaagtcaacgtcgagtag 791
>gb|AY104434.1| Zea mays PCO116068 mRNA sequence Length = 1042 Score = 77.8 bits (39), Expect = 7e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 473 aaggagcacgtccaggtgcgcgcggacaagaacatcctggtgatcaagggcgagggcgag 532 |||||||||||| ||||| | ||||| |||||| ||||||||||||||||||||||||| Sbjct: 496 aaggagcacgtcaaggtgtgggcggagcagaacagcctggtgatcaagggcgagggcgag 555 Query: 533 aag 535 ||| Sbjct: 556 aag 558 Score = 77.8 bits (39), Expect = 7e-11 Identities = 93/111 (83%) Strand = Plus / Plus Query: 608 tacaagatggacaagatcaaggctgagatgaagaatggcatgctctgggtcaccctgctc 667 |||| |||||||||||||||||| ||||||||||| ||| ||||| ||| | ||| Sbjct: 628 tacaggatggacaagatcaaggcggagatgaagaacggcgtgctcaaggtggtcgtgccg 687 Query: 668 aagctgaaggaggaggagcgcaaggacgtcttccacgtcaaggtcgagtag 718 ||| |||||||| || ||||||||||||| ||||| ||||| ||||||||| Sbjct: 688 aaggtgaaggagcagcagcgcaaggacgtgttccaagtcaacgtcgagtag 738
>gb|AF035460.1|AF035460 Zea mays low molecular weight heat shock protein precursor (hsp22) mRNA, nuclear gene encoding mitochondrial protein, complete cds Length = 1028 Score = 77.8 bits (39), Expect = 7e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 473 aaggagcacgtccaggtgcgcgcggacaagaacatcctggtgatcaagggcgagggcgag 532 |||||||||||| ||||| | ||||| |||||| ||||||||||||||||||||||||| Sbjct: 493 aaggagcacgtcaaggtgtgggcggagcagaacagcctggtgatcaagggcgagggcgag 552 Query: 533 aag 535 ||| Sbjct: 553 aag 555 Score = 77.8 bits (39), Expect = 7e-11 Identities = 93/111 (83%) Strand = Plus / Plus Query: 608 tacaagatggacaagatcaaggctgagatgaagaatggcatgctctgggtcaccctgctc 667 |||| |||||||||||||||||| ||||||||||| ||| ||||| ||| | ||| Sbjct: 625 tacaggatggacaagatcaaggcggagatgaagaacggcgtgctcaaggtggtcgtgccg 684 Query: 668 aagctgaaggaggaggagcgcaaggacgtcttccacgtcaaggtcgagtag 718 ||| |||||||| || ||||||||||||| ||||| ||||| ||||||||| Sbjct: 685 aaggtgaaggagcagcagcgcaaggacgtgttccaagtcaacgtcgagtag 735
>gb|AF104107.1| Triticum aestivum small heat shock protein Hsp23.5 mRNA, nuclear gene encoding mitochondrial protein, complete cds Length = 878 Score = 75.8 bits (38), Expect = 3e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 458 atgccggggctgaccaaggagcacgtccaggtgcgcgcggacaagaacatcctggtgatc 517 |||||||||||| |||||| ||||| ||||| | ||||| |||||| |||||||||| Sbjct: 429 atgccggggctgggcaaggaacacgtgaaggtgtgggcggagcagaacagcctggtgatc 488 Query: 518 aagggcgagggcgagaag 535 |||||||||||||||||| Sbjct: 489 aagggcgagggcgagaag 506 Score = 67.9 bits (34), Expect = 6e-08 Identities = 85/102 (83%) Strand = Plus / Plus Query: 613 gatggacaagatcaaggctgagatgaagaatggcatgctctgggtcaccctgctcaagct 672 ||||||| |||||||||| ||||||||||| ||| ||||| |||| | ||| |||| | Sbjct: 578 gatggaccagatcaaggccgagatgaagaacggcgtgctcagggtggtcgtgcccaaggt 637 Query: 673 gaaggaggaggagcgcaaggacgtcttccacgtcaaggtcga 714 ||||||||| | ||||||||||||||| | ||||| ||||| Sbjct: 638 caaggaggagcatcgcaaggacgtcttcgaggtcaacgtcga 679
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 54.0 bits (27), Expect = 0.001 Identities = 27/27 (100%) Strand = Plus / Minus Query: 661 cctgctcaagctgaaggaggaggagcg 687 ||||||||||||||||||||||||||| Sbjct: 3919482 cctgctcaagctgaaggaggaggagcg 3919456
>gb|CP000463.1| Rhodopseudomonas palustris BisA53, complete genome Length = 5505494 Score = 46.1 bits (23), Expect = 0.24 Identities = 23/23 (100%) Strand = Plus / Plus Query: 451 ggtgccgatgccggggctgacca 473 ||||||||||||||||||||||| Sbjct: 5395357 ggtgccgatgccggggctgacca 5395379
>gb|CP000158.1| Hyphomonas neptunium ATCC 15444, complete genome Length = 3705021 Score = 46.1 bits (23), Expect = 0.24 Identities = 23/23 (100%) Strand = Plus / Plus Query: 307 cccgctcggcgcgccgaccagca 329 ||||||||||||||||||||||| Sbjct: 2505401 cccgctcggcgcgccgaccagca 2505423
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 46.1 bits (23), Expect = 0.24 Identities = 23/23 (100%) Strand = Plus / Plus Query: 487 ggtgcgcgcggacaagaacatcc 509 ||||||||||||||||||||||| Sbjct: 930426 ggtgcgcgcggacaagaacatcc 930448
>emb|X15333.1|CRHSP Chenopodium rubrum mRNA for heat-shock protein Length = 742 Score = 46.1 bits (23), Expect = 0.24 Identities = 23/23 (100%) Strand = Plus / Plus Query: 623 atcaaggctgagatgaagaatgg 645 ||||||||||||||||||||||| Sbjct: 575 atcaaggctgagatgaagaatgg 597
>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence Length = 27905053 Score = 44.1 bits (22), Expect = 0.93 Identities = 22/22 (100%) Strand = Plus / Minus Query: 672 tgaaggaggaggagcgcaagga 693 |||||||||||||||||||||| Sbjct: 25689777 tgaaggaggaggagcgcaagga 25689756 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 673 gaaggaggaggagcgcaagga 693 ||||||||||||||||||||| Sbjct: 26618430 gaaggaggaggagcgcaagga 26618410
>emb|AM270418.1| Uncultured organism cosmid clone 10D02 Length = 40821 Score = 44.1 bits (22), Expect = 0.93 Identities = 22/22 (100%) Strand = Plus / Plus Query: 313 cggcgcgccgaccagcatggcc 334 |||||||||||||||||||||| Sbjct: 28828 cggcgcgccgaccagcatggcc 28849
>gb|AC007893.8| Drosophila melanogaster clone BACR02E15, complete sequence Length = 182430 Score = 44.1 bits (22), Expect = 0.93 Identities = 22/22 (100%) Strand = Plus / Minus Query: 672 tgaaggaggaggagcgcaagga 693 |||||||||||||||||||||| Sbjct: 93187 tgaaggaggaggagcgcaagga 93166
>ref|NM_170445.1| Drosophila melanogaster CG7816-RG, transcript variant G (CG7816), mRNA Length = 1541 Score = 44.1 bits (22), Expect = 0.93 Identities = 22/22 (100%) Strand = Plus / Plus Query: 672 tgaaggaggaggagcgcaagga 693 |||||||||||||||||||||| Sbjct: 1185 tgaaggaggaggagcgcaagga 1206
>ref|NM_170444.1| Drosophila melanogaster CG7816-RF, transcript variant F (CG7816), mRNA Length = 1823 Score = 44.1 bits (22), Expect = 0.93 Identities = 22/22 (100%) Strand = Plus / Plus Query: 672 tgaaggaggaggagcgcaagga 693 |||||||||||||||||||||| Sbjct: 1467 tgaaggaggaggagcgcaagga 1488
>ref|NM_170443.1| Drosophila melanogaster CG7816-RE, transcript variant E (CG7816), mRNA Length = 1535 Score = 44.1 bits (22), Expect = 0.93 Identities = 22/22 (100%) Strand = Plus / Plus Query: 672 tgaaggaggaggagcgcaagga 693 |||||||||||||||||||||| Sbjct: 1179 tgaaggaggaggagcgcaagga 1200
>ref|NM_170442.1| Drosophila melanogaster CG7816-RD, transcript variant D (CG7816), mRNA Length = 1494 Score = 44.1 bits (22), Expect = 0.93 Identities = 22/22 (100%) Strand = Plus / Plus Query: 672 tgaaggaggaggagcgcaagga 693 |||||||||||||||||||||| Sbjct: 1138 tgaaggaggaggagcgcaagga 1159
>ref|NM_170441.1| Drosophila melanogaster CG7816-RC, transcript variant C (CG7816), mRNA Length = 1572 Score = 44.1 bits (22), Expect = 0.93 Identities = 22/22 (100%) Strand = Plus / Plus Query: 672 tgaaggaggaggagcgcaagga 693 |||||||||||||||||||||| Sbjct: 1216 tgaaggaggaggagcgcaagga 1237
>ref|NM_170440.1| Drosophila melanogaster CG7816-RA, transcript variant A (CG7816), mRNA Length = 1533 Score = 44.1 bits (22), Expect = 0.93 Identities = 22/22 (100%) Strand = Plus / Plus Query: 672 tgaaggaggaggagcgcaagga 693 |||||||||||||||||||||| Sbjct: 1177 tgaaggaggaggagcgcaagga 1198
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 44.1 bits (22), Expect = 0.93 Identities = 28/30 (93%) Strand = Plus / Minus Query: 503 aacatcctggtgatcaagggcgagggcgag 532 |||| |||||||| |||||||||||||||| Sbjct: 6905271 aacagcctggtgagcaagggcgagggcgag 6905242
>gb|AY060276.1| Drosophila melanogaster GH11142 full insert cDNA Length = 3378 Score = 44.1 bits (22), Expect = 0.93 Identities = 22/22 (100%) Strand = Plus / Plus Query: 672 tgaaggaggaggagcgcaagga 693 |||||||||||||||||||||| Sbjct: 3006 tgaaggaggaggagcgcaagga 3027
>dbj|AP006083.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT44D21, TM0127a, complete sequence Length = 26994 Score = 44.1 bits (22), Expect = 0.93 Identities = 34/38 (89%) Strand = Plus / Plus Query: 608 tacaagatggacaagatcaaggctgagatgaagaatgg 645 |||||||| || ||||||| ||||||||||||||||| Sbjct: 7 tacaagattgatcagatcaaagctgagatgaagaatgg 44 Score = 44.1 bits (22), Expect = 0.93 Identities = 34/38 (89%) Strand = Plus / Plus Query: 608 tacaagatggacaagatcaaggctgagatgaagaatgg 645 |||||||| || ||||||| ||||||||||||||||| Sbjct: 11326 tacaagattgatcagatcaaagctgagatgaagaatgg 11363
>gb|BT001774.1| Drosophila melanogaster RH13513 full insert cDNA Length = 1838 Score = 44.1 bits (22), Expect = 0.93 Identities = 22/22 (100%) Strand = Plus / Plus Query: 672 tgaaggaggaggagcgcaagga 693 |||||||||||||||||||||| Sbjct: 1468 tgaaggaggaggagcgcaagga 1489
>emb|X61504.1|OCNHE1MR O.cuniculus NHE-1 mRNA for renal Na(+)/H(+) exchanger Length = 3352 Score = 44.1 bits (22), Expect = 0.93 Identities = 28/30 (93%) Strand = Plus / Plus Query: 513 tgatcaagggcgagggcgagaagcagccct 542 |||||||||||| ||||||||||| ||||| Sbjct: 1160 tgatcaagggcgtgggcgagaagccgccct 1189
>emb|X59935.1|OCNAHEXC Rabbit mRNA for Na(+)/H(+) exchanger Length = 3957 Score = 44.1 bits (22), Expect = 0.93 Identities = 28/30 (93%) Strand = Plus / Plus Query: 513 tgatcaagggcgagggcgagaagcagccct 542 |||||||||||| ||||||||||| ||||| Sbjct: 756 tgatcaagggcgtgggcgagaagccgccct 785
>gb|DQ244864.1| Zea mays clone 11236 mRNA sequence Length = 663 Score = 42.1 bits (21), Expect = 3.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 664 gctcaagctgaaggaggaggagcgc 688 |||||||||| |||||||||||||| Sbjct: 283 gctcaagctgcaggaggaggagcgc 307
>gb|CP000440.1| Burkholderia cepacia AMMD chromosome 1, complete sequence Length = 3556545 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 310 gctcggcgcgccgaccagcat 330 ||||||||||||||||||||| Sbjct: 2473558 gctcggcgcgccgaccagcat 2473578
>gb|AC189684.2| Gallus gallus BAC clone TAM33-5L13 from chromosome z, complete sequence Length = 237096 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 871 tctgttagtttcctctatgtt 891 ||||||||||||||||||||| Sbjct: 55147 tctgttagtttcctctatgtt 55167
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 310 gctcggcgcgccgaccagcat 330 ||||||||||||||||||||| Sbjct: 1462929 gctcggcgcgccgaccagcat 1462909
>ref|NM_113153.2| Arabidopsis thaliana unknown protein (AT3G22540) mRNA, complete cds Length = 538 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 788 tctttcttccttgttttgttt 808 ||||||||||||||||||||| Sbjct: 446 tctttcttccttgttttgttt 466
>gb|AC109296.16| Mus musculus chromosome 1, clone RP24-240J15, complete sequence Length = 161257 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 788 tctttcttccttgttttgttt 808 ||||||||||||||||||||| Sbjct: 124356 tctttcttccttgttttgttt 124376
>gb|AC121143.12| Mus musculus chromosome 1, clone RP24-177B16, complete sequence Length = 176008 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 788 tctttcttccttgttttgttt 808 ||||||||||||||||||||| Sbjct: 10716 tctttcttccttgttttgttt 10736
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 310 gctcggcgcgccgaccagcat 330 ||||||||||||||||||||| Sbjct: 2624577 gctcggcgcgccgaccagcat 2624597
>gb|AY090554.1| Microtus kirgisorum HMG14, HL30, MKK2 pseudogenes, complete sequences; and xist gene, complete sequence Length = 37042 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 787 gtctttcttccttgttttgtt 807 ||||||||||||||||||||| Sbjct: 29390 gtctttcttccttgttttgtt 29410
>gb|BT018883.1| Zea mays clone EL01T0205A07.d mRNA sequence Length = 1280 Score = 42.1 bits (21), Expect = 3.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 664 gctcaagctgaaggaggaggagcgc 688 |||||||||| |||||||||||||| Sbjct: 867 gctcaagctgcaggaggaggagcgc 891
>gb|AC025721.3| Caenorhabditis elegans cosmid Y48G8AL, complete sequence Length = 126020 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 177 acaacaccaccgccgtcatcg 197 ||||||||||||||||||||| Sbjct: 85027 acaacaccaccgccgtcatcg 85007
>gb|AY600578.1| Arabidopsis thaliana hypothetical protein (At3g22540) mRNA, complete cds Length = 555 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 788 tctttcttccttgttttgttt 808 ||||||||||||||||||||| Sbjct: 425 tctttcttccttgttttgttt 445
>gb|BT014798.1| Arabidopsis thaliana At3g22540 gene, complete cds Length = 521 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 788 tctttcttccttgttttgttt 808 ||||||||||||||||||||| Sbjct: 429 tctttcttccttgttttgttt 449
>gb|AC108911.9| Mus musculus chromosome 3, clone RP24-176P16, complete sequence Length = 162278 Score = 42.1 bits (21), Expect = 3.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 781 tttggtgtctttcttccttgttttg 805 ||||||||||||||| ||||||||| Sbjct: 150883 tttggtgtctttcttacttgttttg 150907
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 42.1 bits (21), Expect = 3.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 184 caccgccgtcatcgccgaccgccgc 208 |||||||||||||| |||||||||| Sbjct: 2610352 caccgccgtcatcggcgaccgccgc 2610376
>gb|AC080158.4| Mus musculus strain C57BL6/J chromosome 5 clone RP23-311J12, complete sequence Length = 163722 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 779 gttttggtgtctttcttcctt 799 ||||||||||||||||||||| Sbjct: 87751 gttttggtgtctttcttcctt 87771
>ref|NM_170524.1| Drosophila melanogaster warts CG12072-RA (wts), mRNA Length = 5771 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 673 gaaggaggaggagcgcaagga 693 ||||||||||||||||||||| Sbjct: 3040 gaaggaggaggagcgcaagga 3060
>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 Length = 2668010 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 899 tgatgaacttgctttggtggt 919 ||||||||||||||||||||| Sbjct: 1868196 tgatgaacttgctttggtggt 1868216
>gb|AC007821.4|AC007821 Drosophila melanogaster, chromosome 3R, region 99F-100A, BAC clone BACR48I02, complete sequence Length = 163741 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 673 gaaggaggaggagcgcaagga 693 ||||||||||||||||||||| Sbjct: 105414 gaaggaggaggagcgcaagga 105394
>gb|AC079811.6| Homo sapiens BAC clone CTD-2502L6 from 2, complete sequence Length = 130618 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 778 tgttttggtgtctttcttcct 798 ||||||||||||||||||||| Sbjct: 12608 tgttttggtgtctttcttcct 12588
>gb|BT004830.1| Drosophila melanogaster SD19495 full insert cDNA Length = 4874 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 673 gaaggaggaggagcgcaagga 693 ||||||||||||||||||||| Sbjct: 2039 gaaggaggaggagcgcaagga 2059
>dbj|AP000731.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone:F16J14 Length = 47827 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 788 tctttcttccttgttttgttt 808 ||||||||||||||||||||| Sbjct: 21223 tctttcttccttgttttgttt 21203
>emb|BX826141.1|CNS0A4XZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL87ZB10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 538 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 788 tctttcttccttgttttgttt 808 ||||||||||||||||||||| Sbjct: 446 tctttcttccttgttttgttt 466
>gb|AY109334.1| Zea mays CL3259_2 mRNA sequence Length = 1585 Score = 42.1 bits (21), Expect = 3.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 664 gctcaagctgaaggaggaggagcgc 688 |||||||||| |||||||||||||| Sbjct: 452 gctcaagctgcaggaggaggagcgc 428
>ref|XM_670941.1| Plasmodium berghei strain ANKA hypothetical protein (PB000911.03.0) partial mRNA Length = 2787 Score = 42.1 bits (21), Expect = 3.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 786 tgtctttcttccttgttttgtttcc 810 ||||||||||| ||||||||||||| Sbjct: 480 tgtctttcttctttgttttgtttcc 456
>gb|L39837.1|DROWARTS Drosophila melanogaster tumor supressor (warts) mRNA exons 1-8, complete cds Length = 5360 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 673 gaaggaggaggagcgcaagga 693 ||||||||||||||||||||| Sbjct: 3023 gaaggaggaggagcgcaagga 3043
>gb|U29608.1|DMU29608 Drosophila melanogaster large tumor suppressor (lats) mRNA, long transcript, complete cds Length = 5720 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 673 gaaggaggaggagcgcaagga 693 ||||||||||||||||||||| Sbjct: 2989 gaaggaggaggagcgcaagga 3009 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 144,248,070 Number of extensions: 9512368 Number of successful extensions: 195955 Number of sequences better than 10.0: 65 Number of HSP's gapped: 195939 Number of HSP's successfully gapped: 98 Length of query: 974 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 951 Effective length of database: 18,503,978,556 Effective search space: 17597283606756 Effective search space used: 17597283606756 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)