ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf29m07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os06g0172600:Os06g0172600 125 1e-29
2AK060583: 124 4e-29
3AK100878:Os06g0181500 30 1.1
4AK068950:Os06g0181500 30 1.1
5Os01g0595100:Os01g0595100 28 4.2
6AK100256:Os05g0588700 27 7.2
7Os02g0494700:Os02g0494700 27 9.4
8AK111052:Os03g0660000 27 9.5

>Os06g0172600:Os06g0172600 |
          Length = 62
 Score =  125 bits (314), Expect = 1e-29
 Identities = 60/62 (96%), Positives = 62/62 (100%)
 Frame = +2

Query: 98  MGKVHGSLARAGKVRGQTPKVAKQDKKKQPRGRAHKRIQYNRRFVTAVVGFGKKRGPNSS 277
           MGKVHGSLARAGKVRGQTPKVAKQDKKK+PRGRAHKR+QYNRRFVTAVVGFGKKRGPNSS
Sbjct: 1   MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS 60

Query: 278 EK 283
           EK
Sbjct: 61  EK 62



to top

>AK060583: |
          Length = 62

 Score =  124 bits (310), Expect = 4e-29
 Identities = 59/62 (95%), Positives = 61/62 (98%)
 Frame = +2

Query: 98  MGKVHGSLARAGKVRGQTPKVAKQDKKKQPRGRAHKRIQYNRRFVTAVVGFGKKRGPNSS 277
           MGKVHGSLARAGKVRGQTPKVAKQDKKK+PRGRAHKR+QYNRRFVTA VGFGKKRGPNSS
Sbjct: 1   MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAAVGFGKKRGPNSS 60

Query: 278 EK 283
           EK
Sbjct: 61  EK 62



to top

>AK100878:Os06g0181500 |
          Length = 859

 Score = 29.6 bits (65), Expect = 1.1
 Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
 Frame = +2

Query: 170 DKKKQPRGRAHKRIQYNRRFVTAVVGFGKKR--GPNSSEK*ARREIKKALPLRWFPLSF 340
           D  K P     ++++ +R+ +T   G  + R  GPN  E+    ++ K L   W PLS+
Sbjct: 16  DLSKAPVAEVFQKLKCDRKGLTGAEGESRLRLYGPNKLEEKKESKLLKFLGFMWNPLSW 74



to top

>AK068950:Os06g0181500 |
          Length = 869

 Score = 29.6 bits (65), Expect = 1.1
 Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
 Frame = +2

Query: 170 DKKKQPRGRAHKRIQYNRRFVTAVVGFGKKR--GPNSSEK*ARREIKKALPLRWFPLSF 340
           D  K P     ++++ +R+ +T   G  + R  GPN  E+    ++ K L   W PLS+
Sbjct: 16  DLSKAPVAEVFQKLKCDRKGLTGAEGESRLRLYGPNKLEEKKESKLLKFLGFMWNPLSW 74



to top

>Os01g0595100:Os01g0595100 |
          Length = 837

 Score = 27.7 bits (60), Expect = 4.2
 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
 Frame = +2

Query: 101 GKVHGSLARAGKVRGQTPKVAKQDK---KKQPRGRAHKRIQYNRRFVTAVVGFGKKRGPN 271
           G  HG  AR GK RG    +    +   +K  RGR  +R +   +    VVGF +K+   
Sbjct: 243 GTGHG-FARGGKYRGYNEDINNNHQNRPQKVVRGRGPRRYEAVAKNNRDVVGFQRKQPAR 301

Query: 272 SSE 280
           S E
Sbjct: 302 SRE 304



to top

>AK100256:Os05g0588700 |
          Length = 858

 Score = 26.9 bits (58), Expect = 7.2
 Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
 Frame = +2

Query: 98  MGKVHGSLARAGKVRGQ-TPKVAKQDKKKQPRGRAHKRIQYNRRFVTAVVGFGKKRGPNS 274
           M K+ G   +A   R Q TP    QD+ +   GR +       +  T ++   +K+G + 
Sbjct: 196 MNKLDGLRVKATNGRNQATPLKYTQDQNQNHEGRGYSLRHKQTKRTTGLIENPRKQGDDK 255

Query: 275 SEK*ARREIKKALPL 319
           S      E  KA PL
Sbjct: 256 SPHAEDDEEHKAEPL 270



to top

>Os02g0494700:Os02g0494700 |
          Length = 1648

 Score = 26.6 bits (57), Expect = 9.4
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +2

Query: 134 KVRGQTPKVAKQDKKKQPRGRAHKRIQYN 220
           K RG   K A+ D+K + RGR  K  + N
Sbjct: 699 KARGHPKKQAEPDEKPKARGRVRKTTEAN 727



to top

>AK111052:Os03g0660000 |
          Length = 108

 Score = 26.6 bits (57), Expect = 9.5
 Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 6/42 (14%)
 Frame = -1

Query: 207 LLCARPRGCFFLSCFATLGVC------PRTFPARASDPCTLP 100
           LLC RP G    S  A  G C      P   P  A+ P +LP
Sbjct: 57  LLCRRPTGLLATSALAKPGRCGARPRQPTATPFCAASPLSLP 98


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 8,955,999
Number of extensions: 154324
Number of successful extensions: 466
Number of sequences better than 10.0: 8
Number of HSP's gapped: 466
Number of HSP's successfully gapped: 8
Length of query: 166
Length of database: 15,399,855
Length adjustment: 93
Effective length of query: 73
Effective length of database: 11,676,042
Effective search space: 852351066
Effective search space used: 852351066
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top