>P49689:RS30_ARATH 40S ribosomal protein S30 - Arabidopsis thaliana (Mouse-ear cress)|
          Length = 62
 Score =  124 bits (310), Expect = 2e-28
 Identities = 59/62 (95%), Positives = 62/62 (100%)
 Frame = +2

Query: 98  MGKVHGSLARAGKVRGQTPKVAKQDKKKQPRGRAHKRIQYNRRFVTAVVGFGKKRGPNSS 277
           MGKVHGSLARAGKVRGQTPKVAKQDKKK+PRGRAHKR+Q+NRRFVTAVVGFGKKRGPNSS
Sbjct: 1   MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRLQHNRRFVTAVVGFGKKRGPNSS 60

Query: 278 EK 283
           EK
Sbjct: 61  EK 62

>P62864:RS30_RAT 40S ribosomal protein S30 - Rattus norvegicus (Rat)|
          Length = 59

 Score = 93.6 bits (231), Expect = 3e-19
 Identities = 44/58 (75%), Positives = 51/58 (87%)
 Frame = +2

Query: 104 KVHGSLARAGKVRGQTPKVAKQDKKKQPRGRAHKRIQYNRRFVTAVVGFGKKRGPNSS 277
           KVHGSLARAGKVRGQTPKVAKQ+KKK+  GRA +R+QYNRRFV  V  FGKK+GPN++
Sbjct: 1   KVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNAN 58

>P0C2F0:RS30_PONPY 40S ribosomal protein S30 - Pongo pygmaeus (Orangutan)|
          Length = 59

 Score = 93.6 bits (231), Expect = 3e-19
 Identities = 44/58 (75%), Positives = 51/58 (87%)
 Frame = +2

Query: 104 KVHGSLARAGKVRGQTPKVAKQDKKKQPRGRAHKRIQYNRRFVTAVVGFGKKRGPNSS 277
           KVHGSLARAGKVRGQTPKVAKQ+KKK+  GRA +R+QYNRRFV  V  FGKK+GPN++
Sbjct: 1   KVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNAN 58

>P62863:RS30_PIG 40S ribosomal protein S30 - Sus scrofa (Pig)|
          Length = 59

 Score = 93.6 bits (231), Expect = 3e-19
 Identities = 44/58 (75%), Positives = 51/58 (87%)
 Frame = +2

Query: 104 KVHGSLARAGKVRGQTPKVAKQDKKKQPRGRAHKRIQYNRRFVTAVVGFGKKRGPNSS 277
           KVHGSLARAGKVRGQTPKVAKQ+KKK+  GRA +R+QYNRRFV  V  FGKK+GPN++
Sbjct: 1   KVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNAN 58

>P62867:RS30_MUSSI 40S ribosomal protein S30 - Mus spicilegus (Steppe mouse)|
          Length = 59

 Score = 93.6 bits (231), Expect = 3e-19
 Identities = 44/58 (75%), Positives = 51/58 (87%)
 Frame = +2

Query: 104 KVHGSLARAGKVRGQTPKVAKQDKKKQPRGRAHKRIQYNRRFVTAVVGFGKKRGPNSS 277
           KVHGSLARAGKVRGQTPKVAKQ+KKK+  GRA +R+QYNRRFV  V  FGKK+GPN++
Sbjct: 1   KVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNAN 58

>P62862:RS30_MOUSE 40S ribosomal protein S30 - Mus musculus (Mouse)|
          Length = 59

 Score = 93.6 bits (231), Expect = 3e-19
 Identities = 44/58 (75%), Positives = 51/58 (87%)
 Frame = +2

Query: 104 KVHGSLARAGKVRGQTPKVAKQDKKKQPRGRAHKRIQYNRRFVTAVVGFGKKRGPNSS 277
           KVHGSLARAGKVRGQTPKVAKQ+KKK+  GRA +R+QYNRRFV  V  FGKK+GPN++
Sbjct: 1   KVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNAN 58

>P62861:RS30_HUMAN 40S ribosomal protein S30 - Homo sapiens (Human)|
          Length = 59

 Score = 93.6 bits (231), Expect = 3e-19
 Identities = 44/58 (75%), Positives = 51/58 (87%)
 Frame = +2

Query: 104 KVHGSLARAGKVRGQTPKVAKQDKKKQPRGRAHKRIQYNRRFVTAVVGFGKKRGPNSS 277
           KVHGSLARAGKVRGQTPKVAKQ+KKK+  GRA +R+QYNRRFV  V  FGKK+GPN++
Sbjct: 1   KVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNAN 58

>P62860:RS30_CRIGR 40S ribosomal protein S30 - Cricetulus griseus (Chinese hamster)|
          Length = 59

 Score = 93.6 bits (231), Expect = 3e-19
 Identities = 44/58 (75%), Positives = 51/58 (87%)
 Frame = +2

Query: 104 KVHGSLARAGKVRGQTPKVAKQDKKKQPRGRAHKRIQYNRRFVTAVVGFGKKRGPNSS 277
           KVHGSLARAGKVRGQTPKVAKQ+KKK+  GRA +R+QYNRRFV  V  FGKK+GPN++
Sbjct: 1   KVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNAN 58

>P62866:RS30_BOVIN 40S ribosomal protein S30 - Bos taurus (Bovine)|
          Length = 59

 Score = 93.6 bits (231), Expect = 3e-19
 Identities = 44/58 (75%), Positives = 51/58 (87%)
 Frame = +2

Query: 104 KVHGSLARAGKVRGQTPKVAKQDKKKQPRGRAHKRIQYNRRFVTAVVGFGKKRGPNSS 277
           KVHGSLARAGKVRGQTPKVAKQ+KKK+  GRA +R+QYNRRFV  V  FGKK+GPN++
Sbjct: 1   KVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNAN 58

>Q9W6Y0:RS30_ORYLA 40S ribosomal protein S30 - Oryzias latipes (Medaka fish) (Japanese|
           ricefish)
          Length = 59

 Score = 82.4 bits (202), Expect = 7e-16
 Identities = 39/58 (67%), Positives = 47/58 (81%)
 Frame = +2

Query: 104 KVHGSLARAGKVRGQTPKVAKQDKKKQPRGRAHKRIQYNRRFVTAVVGFGKKRGPNSS 277
           KVHGSLARAGKVRGQTP V K ++K++  GRA +RIQYNRRFV  V  FGKK+G N++
Sbjct: 1   KVHGSLARAGKVRGQTPNVDKHEEKEEEDGRAKRRIQYNRRFVNVVPTFGKKKGANAN 58

>O42952:RS30_SCHPO 40S ribosomal protein S30 - Schizosaccharomyces pombe (Fission|
           yeast)
          Length = 61

 Score = 79.7 bits (195), Expect = 5e-15
 Identities = 40/60 (66%), Positives = 45/60 (75%)
 Frame = +2

Query: 98  MGKVHGSLARAGKVRGQTPKVAKQDKKKQPRGRAHKRIQYNRRFVTAVVGFGKKRGPNSS 277
           MGKVHGSLARAGKV+ QTPKV KQ+K KQP+GRA+KR+ Y RRFV      G KR  N S
Sbjct: 1   MGKVHGSLARAGKVKSQTPKVEKQEKPKQPKGRAYKRLLYVRRFVNVTNMVGGKRRMNPS 60

>O96269:RS30_PLAF7 40S ribosomal protein S30 - Plasmodium falciparum (isolate 3D7)|
          Length = 58

 Score = 75.5 bits (184), Expect = 9e-14
 Identities = 40/59 (67%), Positives = 44/59 (74%)
 Frame = +2

Query: 98  MGKVHGSLARAGKVRGQTPKVAKQDKKKQPRGRAHKRIQYNRRFVTAVVGFGKKRGPNS 274
           MGKVHGSLARAGKV+ QTPKV K DKKK+  GRA KR  YNRRF       G+K+GPNS
Sbjct: 1   MGKVHGSLARAGKVKNQTPKVPKLDKKKRLTGRAKKRQLYNRRFSD---NGGRKKGPNS 56

>Q12087:RS30_YEAST 40S ribosomal protein S30 - Saccharomyces cerevisiae (Baker's|
           yeast)
          Length = 63

 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 35/55 (63%), Positives = 43/55 (78%)
 Frame = +2

Query: 98  MGKVHGSLARAGKVRGQTPKVAKQDKKKQPRGRAHKRIQYNRRFVTAVVGFGKKR 262
           M KVHGSLARAGKV+ QTPKV K +K K+P+GRA+KR+ Y RRFV   +  GK+R
Sbjct: 1   MAKVHGSLARAGKVKSQTPKVEKTEKPKKPKGRAYKRLLYTRRFVNVTLVNGKRR 55

>Q9Y9T9:RS30_AERPE 30S ribosomal protein S30 - Aeropyrum pernix|
          Length = 50

 Score = 38.1 bits (87), Expect = 0.016
 Identities = 19/39 (48%), Positives = 25/39 (64%)
 Frame = +2

Query: 110 HGSLARAGKVRGQTPKVAKQDKKKQPRGRAHKRIQYNRR 226
           HGSL +AGKVR QTP++  + KK  P  R   R++Y  R
Sbjct: 4   HGSLTKAGKVRKQTPRLPAKQKKNYP-PRLKNRLKYQVR 41

>P27419:RR11_EUGGR Chloroplast 30S ribosomal protein S11 - Euglena gracilis|
          Length = 129

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 20/58 (34%), Positives = 26/58 (44%)
 Frame = +2

Query: 146 QTPKVAKQDKKKQPRGRAHKRIQYNRRFVTAVVGFGKKRGPNSSEK*ARREIKKALPL 319
           Q  K+ K  KKK P+G  H +  YN   V+     G     +SS     +  KKA PL
Sbjct: 4   QKKKIIKITKKKFPKGIVHIKTTYNNVLVSVSDPKGNVIAWSSSGACGFKSSKKATPL 61

>Q9CR92:CCD96_MOUSE Coiled-coil domain-containing protein 96 - Mus musculus (Mouse)|
          Length = 584

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 14/53 (26%), Positives = 30/53 (56%), Gaps = 5/53 (9%)
 Frame = +2

Query: 164 KQDKKKQPRGRAHKRIQYNRRF-----VTAVVGFGKKRGPNSSEK*ARREIKK 307
           ++D+ ++P+G+  +  +   RF     +T +V  G   GP ++++ AR  +KK
Sbjct: 147 ERDRPEKPKGKGKREKRKESRFRPSLPLTTIVEEGAAPGPQAAKEKARESLKK 199


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 53,642,481
Number of extensions: 886123
Number of successful extensions: 2184
Number of sequences better than 10.0: 16
Number of HSP's gapped: 2184
Number of HSP's successfully gapped: 16
Length of query: 166
Length of database: 100,686,439
Length adjustment: 105
Effective length of query: 61
Effective length of database: 71,885,464
Effective search space: 4385013304
Effective search space used: 4385013304
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)