| Clone Name | FLbaf29m07 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK060583.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-H06, full insert sequence Length = 1094 Score = 329 bits (166), Expect = 5e-87 Identities = 199/210 (94%) Strand = Plus / Plus Query: 85 cgccgccgtcgacatgggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgg 144 |||||||||||||||||||||||||||||||||||| || || ||||||||||||||||| Sbjct: 631 cgccgccgtcgacatgggtaaggtgcacggatcgctcgctcgcgccgggaaggtgcgcgg 690 Query: 145 gcagacgcccaaggtggcgaagcaggacaagaagaagcagccccgcggccgcgcacacaa 204 |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| Sbjct: 691 ccagacgcccaaggtggcgaagcaggacaagaagaagaagccccgcggccgcgcccacaa 750 Query: 205 gaggatccagtacaaccgccgcttcgtcaccgccgtcgtcggcttcggcaagaagcgcgg 264 |||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||| Sbjct: 751 gaggatgcagtacaaccgccgcttcgtcaccgccgccgtcggattcggcaagaagcgcgg 810 Query: 265 ccccaactcctccgagaagtaggcgcgccg 294 ||||||||||||||||||||| ||||||| Sbjct: 811 gcccaactcctccgagaagtagacgcgccg 840
>gb|AY106443.1| Zea mays PCO068394 mRNA sequence Length = 667 Score = 313 bits (158), Expect = 3e-82 Identities = 185/194 (95%) Strand = Plus / Plus Query: 97 catgggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaa 156 |||||||||||||||||||||| |||| || ||||||||||| ||||||||||| ||||| Sbjct: 54 catgggtaaggtgcacggatcgttggcgcgcgccgggaaggtccgcgggcagacccccaa 113 Query: 157 ggtggcgaagcaggacaagaagaagcagccccgcggccgcgcacacaagaggatccagta 216 ||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||| Sbjct: 114 ggtggcgaagcaggacaagaagaagaagccccgcggccgcgcgcacaagaggatgcagta 173 Query: 217 caaccgccgcttcgtcaccgccgtcgtcggcttcggcaagaagcgcggccccaactcctc 276 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 174 caaccgccgcttcgtcaccgccgtcgtcggcttcggcaagaagcgcgggcccaactcctc 233 Query: 277 cgagaagtaggcgc 290 |||||||||||||| Sbjct: 234 cgagaagtaggcgc 247
>gb|BT017988.1| Zea mays clone EL01N0526A01.c mRNA sequence Length = 556 Score = 305 bits (154), Expect = 8e-80 Identities = 184/194 (94%) Strand = Plus / Plus Query: 97 catgggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaa 156 |||||||||||||||||||||| |||| || ||||||||||| ||||||||||| ||||| Sbjct: 54 catgggtaaggtgcacggatcgttggcgcgcgccgggaaggtccgcgggcagacccccaa 113 Query: 157 ggtggcgaagcaggacaagaagaagcagccccgcggccgcgcacacaagaggatccagta 216 ||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||| Sbjct: 114 ggtggcgaagcaggacaagaagaagaagccccgcggccgcgcgcacaagaggatgcagta 173 Query: 217 caaccgccgcttcgtcaccgccgtcgtcggcttcggcaagaagcgcggccccaactcctc 276 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 174 caaccgccgcttcgtcaccgccgtcgtcggtttcggcaagaagcgcgggcccaactcctc 233 Query: 277 cgagaagtaggcgc 290 |||||||||||||| Sbjct: 234 cgagaagtaggcgc 247
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 305 bits (154), Expect = 8e-80 Identities = 184/194 (94%) Strand = Plus / Plus Query: 101 ggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtg 160 |||||||||||||||||||| || || ||||||||||||||||| ||||||||||||||| Sbjct: 3655647 ggtaaggtgcacggatcgctcgctcgcgccgggaaggtgcgcggccagacgcccaaggtg 3655706 Query: 161 gcgaagcaggacaagaagaagcagccccgcggccgcgcacacaagaggatccagtacaac 220 ||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||| Sbjct: 3655707 gcgaagcaggacaagaagaagaagccccgcggccgcgcccacaagaggatgcagtacaac 3655766 Query: 221 cgccgcttcgtcaccgccgtcgtcggcttcggcaagaagcgcggccccaactcctccgag 280 |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 3655767 cgccgcttcgtcaccgccgtcgtcggattcggcaagaagcgcgggcccaactcctccgag 3655826 Query: 281 aagtaggcgcgccg 294 |||||| ||||||| Sbjct: 3655827 aagtagacgcgccg 3655840 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 85 cgccgccgtcgacatgggtaag 106 |||||||||||||||||||||| Sbjct: 3655557 cgccgccgtcgacatgggtaag 3655578
>dbj|AP002854.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0014B15 Length = 158821 Score = 305 bits (154), Expect = 8e-80 Identities = 184/194 (94%) Strand = Plus / Plus Query: 101 ggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtg 160 |||||||||||||||||||| || || ||||||||||||||||| ||||||||||||||| Sbjct: 49875 ggtaaggtgcacggatcgctcgctcgcgccgggaaggtgcgcggccagacgcccaaggtg 49934 Query: 161 gcgaagcaggacaagaagaagcagccccgcggccgcgcacacaagaggatccagtacaac 220 ||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||| Sbjct: 49935 gcgaagcaggacaagaagaagaagccccgcggccgcgcccacaagaggatgcagtacaac 49994 Query: 221 cgccgcttcgtcaccgccgtcgtcggcttcggcaagaagcgcggccccaactcctccgag 280 |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 49995 cgccgcttcgtcaccgccgtcgtcggattcggcaagaagcgcgggcccaactcctccgag 50054 Query: 281 aagtaggcgcgccg 294 |||||| ||||||| Sbjct: 50055 aagtagacgcgccg 50068 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 85 cgccgccgtcgacatgggtaag 106 |||||||||||||||||||||| Sbjct: 49785 cgccgccgtcgacatgggtaag 49806
>ref|NM_001063476.1| Oryza sativa (japonica cultivar-group) Os06g0172600 (Os06g0172600) mRNA, complete cds Length = 189 Score = 303 bits (153), Expect = 3e-79 Identities = 180/189 (95%) Strand = Plus / Plus Query: 98 atgggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaag 157 ||||||||||||||||||||||| || || ||||||||||||||||| |||||||||||| Sbjct: 1 atgggtaaggtgcacggatcgctcgctcgcgccgggaaggtgcgcggccagacgcccaag 60 Query: 158 gtggcgaagcaggacaagaagaagcagccccgcggccgcgcacacaagaggatccagtac 217 |||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||| Sbjct: 61 gtggcgaagcaggacaagaagaagaagccccgcggccgcgcccacaagaggatgcagtac 120 Query: 218 aaccgccgcttcgtcaccgccgtcgtcggcttcggcaagaagcgcggccccaactcctcc 277 ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 121 aaccgccgcttcgtcaccgccgtcgtcggattcggcaagaagcgcgggcccaactcctcc 180 Query: 278 gagaagtag 286 ||||||||| Sbjct: 181 gagaagtag 189
>dbj|AK243401.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100064M01, full insert sequence Length = 427 Score = 268 bits (135), Expect = 2e-68 Identities = 186/203 (91%) Strand = Plus / Plus Query: 84 ccgccgccgtcgacatgggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcg 143 ||||||||| || |||||||||||| ||||| |||||||| || |||||||||||| | | Sbjct: 58 ccgccgccgccgccatgggtaaggttcacggctcgctggctcgcgccgggaaggtgaggg 117 Query: 144 ggcagacgcccaaggtggcgaagcaggacaagaagaagcagccccgcggccgcgcacaca 203 |||||||||| ||||||||||||||||||||||||||| ||||||| |||||||| |||| Sbjct: 118 ggcagacgccgaaggtggcgaagcaggacaagaagaagaagccccggggccgcgcccaca 177 Query: 204 agaggatccagtacaaccgccgcttcgtcaccgccgtcgtcggcttcggcaagaagcgcg 263 || |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 178 agcggatgcagtacaaccgccgtttcgtcaccgccgtcgtcggcttcggcaagaagcgcg 237 Query: 264 gccccaactcctccgagaagtag 286 | || |||||||||||||||||| Sbjct: 238 ggccaaactcctccgagaagtag 260
>gb|AY108153.1| Zea mays PCO068393 mRNA sequence Length = 570 Score = 258 bits (130), Expect = 2e-65 Identities = 172/186 (92%) Strand = Plus / Plus Query: 101 ggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtg 160 |||||||| ||||||||||| ||||| || ||||||||||| |||||||||||||||||| Sbjct: 190 ggtaaggttcacggatcgcttgcccgcgcggggaaggtgcgtgggcagacgcccaaggtg 249 Query: 161 gcgaagcaggacaagaagaagcagccccgcggccgcgcacacaagaggatccagtacaac 220 ||||||||||||||||||||| |||||||||||||||| ||||| | || ||||||||| Sbjct: 250 gcgaagcaggacaagaagaagaagccccgcggccgcgcgtacaagcgcatgcagtacaac 309 Query: 221 cgccgcttcgtcaccgccgtcgtcggcttcggcaagaagcgcggccccaactcctccgag 280 |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| Sbjct: 310 cgccgcttcgtcaccgccgtcgtcggattcggcaagaaacgcggccccaactcctcggag 369 Query: 281 aagtag 286 |||||| Sbjct: 370 aagtag 375
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 250 bits (126), Expect = 4e-63 Identities = 171/186 (91%) Strand = Plus / Minus Query: 101 ggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtg 160 |||||||| ||||| |||||||| || |||||||||||| | ||||||||||| |||||| Sbjct: 34314763 ggtaaggttcacggctcgctggctcgcgccgggaaggtgagggggcagacgccgaaggtg 34314704 Query: 161 gcgaagcaggacaagaagaagcagccccgcggccgcgcacacaagaggatccagtacaac 220 ||||||||||||||||||||| ||||||| |||||||| |||||| |||| ||||||||| Sbjct: 34314703 gcgaagcaggacaagaagaagaagccccggggccgcgcccacaagcggatgcagtacaac 34314644 Query: 221 cgccgcttcgtcaccgccgtcgtcggcttcggcaagaagcgcggccccaactcctccgag 280 ||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 34314643 cgccgtttcgtcaccgccgtcgtcggcttcggcaagaagcgcgggccaaactcctccgag 34314584 Query: 281 aagtag 286 |||||| Sbjct: 34314583 aagtag 34314578 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 cgcgccgagaaataaaaaag 307 |||||||||||||||||||| Sbjct: 11571519 cgcgccgagaaataaaaaag 11571538
>dbj|AP004240.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1548_F12 Length = 118814 Score = 250 bits (126), Expect = 4e-63 Identities = 171/186 (91%) Strand = Plus / Minus Query: 101 ggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtg 160 |||||||| ||||| |||||||| || |||||||||||| | ||||||||||| |||||| Sbjct: 12410 ggtaaggttcacggctcgctggctcgcgccgggaaggtgagggggcagacgccgaaggtg 12351 Query: 161 gcgaagcaggacaagaagaagcagccccgcggccgcgcacacaagaggatccagtacaac 220 ||||||||||||||||||||| ||||||| |||||||| |||||| |||| ||||||||| Sbjct: 12350 gcgaagcaggacaagaagaagaagccccggggccgcgcccacaagcggatgcagtacaac 12291 Query: 221 cgccgcttcgtcaccgccgtcgtcggcttcggcaagaagcgcggccccaactcctccgag 280 ||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 12290 cgccgtttcgtcaccgccgtcgtcggcttcggcaagaagcgcgggccaaactcctccgag 12231 Query: 281 aagtag 286 |||||| Sbjct: 12230 aagtag 12225
>dbj|AP005056.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0689B12 Length = 154745 Score = 250 bits (126), Expect = 4e-63 Identities = 171/186 (91%) Strand = Plus / Minus Query: 101 ggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtg 160 |||||||| ||||| |||||||| || |||||||||||| | ||||||||||| |||||| Sbjct: 150036 ggtaaggttcacggctcgctggctcgcgccgggaaggtgagggggcagacgccgaaggtg 149977 Query: 161 gcgaagcaggacaagaagaagcagccccgcggccgcgcacacaagaggatccagtacaac 220 ||||||||||||||||||||| ||||||| |||||||| |||||| |||| ||||||||| Sbjct: 149976 gcgaagcaggacaagaagaagaagccccggggccgcgcccacaagcggatgcagtacaac 149917 Query: 221 cgccgcttcgtcaccgccgtcgtcggcttcggcaagaagcgcggccccaactcctccgag 280 ||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 149916 cgccgtttcgtcaccgccgtcgtcggcttcggcaagaagcgcgggccaaactcctccgag 149857 Query: 281 aagtag 286 |||||| Sbjct: 149856 aagtag 149851
>emb|CT982945.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 462 Score = 214 bits (108), Expect = 2e-52 Identities = 168/188 (89%) Strand = Plus / Plus Query: 97 catgggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaa 156 ||||||||||||||||||||| ||||| || ||||| |||||| | || ||||| || || Sbjct: 56 catgggtaaggtgcacggatccctggctcgcgccggtaaggtgaggggccagaccccgaa 115 Query: 157 ggtggcgaagcaggacaagaagaagcagccccgcggccgcgcacacaagaggatccagta 216 ||||||||||||||||||||||||| |||||||||||||||| |||||| |||| ||||| Sbjct: 116 ggtggcgaagcaggacaagaagaagaagccccgcggccgcgcccacaagcggatgcagta 175 Query: 217 caaccgccgcttcgtcaccgccgtcgtcggcttcggcaagaagcgcggccccaactcctc 276 |||||||||||||||||||||||| || ||||| || |||||| | ||||||||||| || Sbjct: 176 caaccgccgcttcgtcaccgccgttgttggctttgggaagaagaggggccccaactcgtc 235 Query: 277 cgagaagt 284 |||||||| Sbjct: 236 cgagaagt 243
>emb|CT984040.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 497 Score = 206 bits (104), Expect = 5e-50 Identities = 167/188 (88%) Strand = Plus / Plus Query: 97 catgggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaa 156 |||||||||||| |||||||| ||||| || ||||| |||||| | |||||||||||||| Sbjct: 53 catgggtaaggtccacggatctctggctcgcgccggtaaggtgagagggcagacgcccaa 112 Query: 157 ggtggcgaagcaggacaagaagaagcagccccgcggccgcgcacacaagaggatccagta 216 ||| ||||||||||||||||||||| |||| || |||||||| |||||| | || ||||| Sbjct: 113 ggtcgcgaagcaggacaagaagaagaagccgcggggccgcgcccacaagcgcatgcagta 172 Query: 217 caaccgccgcttcgtcaccgccgtcgtcggcttcggcaagaagcgcggccccaactcctc 276 |||||| |||||||||||||||||||||||||||||||||||| | || |||||||| || Sbjct: 173 caaccgtcgcttcgtcaccgccgtcgtcggcttcggcaagaagagagggcccaactcgtc 232 Query: 277 cgagaagt 284 ||||||| Sbjct: 233 ggagaagt 240
>dbj|AP006400.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT22I23, TM0281b, complete sequence Length = 48187 Score = 133 bits (67), Expect = 7e-28 Identities = 121/139 (87%) Strand = Plus / Minus Query: 101 ggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtg 160 |||||||| |||||||| || || ||||| ||||||||| | || || || ||||||||| Sbjct: 39782 ggtaaggttcacggatctcttgctcgtgctgggaaggtgagaggccaaactcccaaggtg 39723 Query: 161 gcgaagcaggacaagaagaagcagccccgcggccgcgcacacaagaggatccagtacaac 220 || |||||||||||||||||| |||||||||||||||| |||||| | || || |||||| Sbjct: 39722 gccaagcaggacaagaagaagaagccccgcggccgcgctcacaagcgcatgcaatacaac 39663 Query: 221 cgccgcttcgtcaccgccg 239 ||||| ||||||||||||| Sbjct: 39662 cgccgattcgtcaccgccg 39644
>gb|AY109694.1| Zea mays CL7222_2 mRNA sequence Length = 609 Score = 115 bits (58), Expect = 2e-22 Identities = 88/98 (89%) Strand = Plus / Minus Query: 189 gcggccgcgcacacaagaggatccagtacaaccgccgcttcgtcaccgccgtcgtcggct 248 |||||||||| |||||| | || || |||||||||||||||||||||||||| || || | Sbjct: 372 gcggccgcgctcacaagcgcatgcaatacaaccgccgcttcgtcaccgccgttgttggat 313 Query: 249 tcggcaagaagcgcggccccaactcctccgagaagtag 286 ||||||||||||||||||||||||| || ||||||||| Sbjct: 312 tcggcaagaagcgcggccccaactcatcggagaagtag 275 Score = 109 bits (55), Expect = 9e-21 Identities = 70/75 (93%) Strand = Plus / Minus Query: 85 cgccgccgtcgacatgggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgg 144 |||||||| || |||||||||||| ||||||||||||||||| || |||||||||||||| Sbjct: 476 cgccgccgccgccatgggtaaggttcacggatcgctggcccgcgctgggaaggtgcgcgg 417 Query: 145 gcagacgcccaaggt 159 ||||||||||||||| Sbjct: 416 gcagacgcccaaggt 402
>dbj|AK226272.1| Arabidopsis thaliana mRNA for ribosomal protein S30 homolog, complete cds, clone: RAFL05-08-E11 Length = 479 Score = 91.7 bits (46), Expect = 2e-15 Identities = 154/190 (81%) Strand = Plus / Plus Query: 97 catgggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaa 156 |||||||||||| ||||| || |||| |||||||| |||||| | || ||||| || || Sbjct: 84 catgggtaaggtacacggttccttggctcgtgccggtaaggtgagaggtcagacaccgaa 143 Query: 157 ggtggcgaagcaggacaagaagaagcagccccgcggccgcgcacacaagaggatccagta 216 ||||| |||||||| ||||||||| |||| || ||||| || ||||| ||| | || | Sbjct: 144 agtggcaaagcaggataagaagaagaagccacgtggccgtgctcacaaaaggttgcaaca 203 Query: 217 caaccgccgcttcgtcaccgccgtcgtcggcttcggcaagaagcgcggccccaactcctc 276 ||| ||||| ||||| |||||||| || || || ||||||||| | || |||||||| || Sbjct: 204 caatcgccgtttcgtaaccgccgttgttggatttggcaagaagagaggacccaactcttc 263 Query: 277 cgagaagtag 286 ||||||||| Sbjct: 264 tgagaagtag 273
>ref|NM_119084.2| Arabidopsis thaliana structural constituent of ribosome (AT4G29390) mRNA, complete cds Length = 495 Score = 91.7 bits (46), Expect = 2e-15 Identities = 154/190 (81%) Strand = Plus / Plus Query: 97 catgggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaa 156 |||||||||||| ||||| || |||| |||||||| |||||| | || ||||| || || Sbjct: 81 catgggtaaggtacacggttccttggctcgtgccggtaaggtgagaggtcagacaccgaa 140 Query: 157 ggtggcgaagcaggacaagaagaagcagccccgcggccgcgcacacaagaggatccagta 216 ||||| |||||||| ||||||||| |||| || ||||| || ||||| ||| | || | Sbjct: 141 agtggcaaagcaggataagaagaagaagccacgtggccgtgctcacaaaaggttgcaaca 200 Query: 217 caaccgccgcttcgtcaccgccgtcgtcggcttcggcaagaagcgcggccccaactcctc 276 ||| ||||| ||||| |||||||| || || || ||||||||| | || |||||||| || Sbjct: 201 caatcgccgtttcgtaaccgccgttgttggatttggcaagaagagaggacccaactcttc 260 Query: 277 cgagaagtag 286 ||||||||| Sbjct: 261 tgagaagtag 270
>gb|BT012137.1| Arabidopsis thaliana At4g29390 mRNA, complete cds Length = 237 Score = 91.7 bits (46), Expect = 2e-15 Identities = 154/190 (81%) Strand = Plus / Minus Query: 97 catgggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaa 156 |||||||||||| ||||| || |||| |||||||| |||||| | || ||||| || || Sbjct: 214 catgggtaaggtacacggttccttggctcgtgccggtaaggtgagaggtcagacaccgaa 155 Query: 157 ggtggcgaagcaggacaagaagaagcagccccgcggccgcgcacacaagaggatccagta 216 ||||| |||||||| ||||||||| |||| || ||||| || ||||| ||| | || | Sbjct: 154 agtggcaaagcaggataagaagaagaagccacgtggccgtgctcacaaaaggttgcaaca 95 Query: 217 caaccgccgcttcgtcaccgccgtcgtcggcttcggcaagaagcgcggccccaactcctc 276 ||| ||||| ||||| |||||||| || || || ||||||||| | || |||||||| || Sbjct: 94 caatcgccgtttcgtaaccgccgttgttggatttggcaagaagagaggacccaactcttc 35 Query: 277 cgagaagtag 286 ||||||||| Sbjct: 34 tgagaagtag 25
>gb|BT011203.1| Arabidopsis thaliana At4g29390 gene, complete cds Length = 390 Score = 91.7 bits (46), Expect = 2e-15 Identities = 154/190 (81%) Strand = Plus / Minus Query: 97 catgggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaa 156 |||||||||||| ||||| || |||| |||||||| |||||| | || ||||| || || Sbjct: 331 catgggtaaggtacacggttccttggctcgtgccggtaaggtgagaggtcagacaccgaa 272 Query: 157 ggtggcgaagcaggacaagaagaagcagccccgcggccgcgcacacaagaggatccagta 216 ||||| |||||||| ||||||||| |||| || ||||| || ||||| ||| | || | Sbjct: 271 agtggcaaagcaggataagaagaagaagccacgtggccgtgctcacaaaaggttgcaaca 212 Query: 217 caaccgccgcttcgtcaccgccgtcgtcggcttcggcaagaagcgcggccccaactcctc 276 ||| ||||| ||||| |||||||| || || || ||||||||| | || |||||||| || Sbjct: 211 caatcgccgtttcgtaaccgccgttgttggatttggcaagaagagaggacccaactcttc 152 Query: 277 cgagaagtag 286 ||||||||| Sbjct: 151 tgagaagtag 142
>emb|BX828921.1|CNS0A2HH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL51ZA04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 438 Score = 91.7 bits (46), Expect = 2e-15 Identities = 154/190 (81%) Strand = Plus / Plus Query: 97 catgggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaa 156 |||||||||||| ||||| || |||| |||||||| |||||| | || ||||| || || Sbjct: 47 catgggtaaggtacacggttccttggctcgtgccggtaaggtgagaggtcagacaccgaa 106 Query: 157 ggtggcgaagcaggacaagaagaagcagccccgcggccgcgcacacaagaggatccagta 216 ||||| |||||||| ||||||||| |||| || ||||| || ||||| ||| | || | Sbjct: 107 agtggcaaagcaggataagaagaagaagccacgtggccgtgctcacaaaaggttgcaaca 166 Query: 217 caaccgccgcttcgtcaccgccgtcgtcggcttcggcaagaagcgcggccccaactcctc 276 ||| ||||| ||||| |||||||| || || || ||||||||| | || |||||||| || Sbjct: 167 caatcgccgtttcgtaaccgccgttgttggatttggcaagaagagaggacccaactcttc 226 Query: 277 cgagaagtag 286 ||||||||| Sbjct: 227 tgagaagtag 236
>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence Length = 27905053 Score = 81.8 bits (41), Expect = 2e-12 Identities = 71/81 (87%) Strand = Plus / Plus Query: 101 ggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtg 160 |||||||||||||| || |||||||||||||| ||||| || ||||||||||||||| Sbjct: 16676888 ggtaaggtgcacggttctctggcccgtgccggcaaggtcaagggacagacgcccaaggtg 16676947 Query: 161 gcgaagcaggacaagaagaag 181 | ||||||||| ||||||||| Sbjct: 16676948 gagaagcaggagaagaagaag 16676968 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Plus Query: 206 aggatccagtacaaccgccgcttcgtca 233 |||||||||||||||||||| ||||||| Sbjct: 16676993 aggatccagtacaaccgccggttcgtca 16677020
>gb|DQ539652.1| Brassica napus clone BnD21 mRNA sequence Length = 270 Score = 81.8 bits (41), Expect = 2e-12 Identities = 143/177 (80%) Strand = Plus / Minus Query: 110 cacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtggcgaagcag 169 ||||||||| |||| |||||||||||||| | |||||||| || ||||| || ||||| Sbjct: 269 cacggatcgttggcacgtgccgggaaggttagagggcagacaccgaaggtagcaaagcaa 210 Query: 170 gacaagaagaagcagccccgcggccgcgcacacaagaggatccagtacaaccgccgcttc 229 || ||||||||| |||| | || ||||| |||||| | ||||| |||| ||||| ||| Sbjct: 209 gataagaagaagaagcctagaggacgcgctcacaagcgtctccagcacaatcgccgtttc 150 Query: 230 gtcaccgccgtcgtcggcttcggcaagaagcgcggccccaactcctccgagaagtag 286 || ||||| || || || ||||| |||||| | || |||||||| || ||||||||| Sbjct: 149 gttaccgctgttgttggtttcggtaagaagagaggacccaactcttctgagaagtag 93
>gb|AC007772.6| Drosophila melanogaster clone BACR19P12, complete sequence Length = 186607 Score = 81.8 bits (41), Expect = 2e-12 Identities = 71/81 (87%) Strand = Plus / Plus Query: 101 ggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtg 160 |||||||||||||| || |||||||||||||| ||||| || ||||||||||||||| Sbjct: 135436 ggtaaggtgcacggttctctggcccgtgccggcaaggtcaagggacagacgcccaaggtg 135495 Query: 161 gcgaagcaggacaagaagaag 181 | ||||||||| ||||||||| Sbjct: 135496 gagaagcaggagaagaagaag 135516 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Plus Query: 206 aggatccagtacaaccgccgcttcgtca 233 |||||||||||||||||||| ||||||| Sbjct: 135541 aggatccagtacaaccgccggttcgtca 135568
>ref|NM_169933.1| Drosophila melanogaster Ribosomal protein S30 CG15697-RB, transcript variant B (RpS30), mRNA Length = 500 Score = 81.8 bits (41), Expect = 2e-12 Identities = 71/81 (87%) Strand = Plus / Plus Query: 101 ggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtg 160 |||||||||||||| || |||||||||||||| ||||| || ||||||||||||||| Sbjct: 232 ggtaaggtgcacggttctctggcccgtgccggcaaggtcaagggacagacgcccaaggtg 291 Query: 161 gcgaagcaggacaagaagaag 181 | ||||||||| ||||||||| Sbjct: 292 gagaagcaggagaagaagaag 312 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Plus Query: 206 aggatccagtacaaccgccgcttcgtca 233 |||||||||||||||||||| ||||||| Sbjct: 337 aggatccagtacaaccgccggttcgtca 364
>ref|NM_142665.1| Drosophila melanogaster Ribosomal protein S30 CG15697-RA, transcript variant A (RpS30), mRNA Length = 572 Score = 81.8 bits (41), Expect = 2e-12 Identities = 71/81 (87%) Strand = Plus / Plus Query: 101 ggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtg 160 |||||||||||||| || |||||||||||||| ||||| || ||||||||||||||| Sbjct: 304 ggtaaggtgcacggttctctggcccgtgccggcaaggtcaagggacagacgcccaaggtg 363 Query: 161 gcgaagcaggacaagaagaag 181 | ||||||||| ||||||||| Sbjct: 364 gagaagcaggagaagaagaag 384 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Plus Query: 206 aggatccagtacaaccgccgcttcgtca 233 |||||||||||||||||||| ||||||| Sbjct: 409 aggatccagtacaaccgccggttcgtca 436
>gb|AY071683.2| Drosophila melanogaster RH08962 full insert cDNA Length = 547 Score = 81.8 bits (41), Expect = 2e-12 Identities = 71/81 (87%) Strand = Plus / Plus Query: 101 ggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtg 160 |||||||||||||| || |||||||||||||| ||||| || ||||||||||||||| Sbjct: 261 ggtaaggtgcacggttctctggcccgtgccggcaaggtcaagggacagacgcccaaggtg 320 Query: 161 gcgaagcaggacaagaagaag 181 | ||||||||| ||||||||| Sbjct: 321 gagaagcaggagaagaagaag 341 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Plus Query: 206 aggatccagtacaaccgccgcttcgtca 233 |||||||||||||||||||| ||||||| Sbjct: 366 aggatccagtacaaccgccggttcgtca 393
>emb|CR931740.2| Medicago truncatula chromosome 5 clone mth2-67g10, COMPLETE SEQUENCE Length = 153273 Score = 81.8 bits (41), Expect = 2e-12 Identities = 113/137 (82%) Strand = Plus / Minus Query: 101 ggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtg 160 |||||||| ||||| || ||||||||||||| || || | || || || |||||||| Sbjct: 139194 ggtaaggttcacggttcattggcccgtgccggtaaagttaggggacaaacacccaaggta 139135 Query: 161 gcgaagcaggacaagaagaagcagccccgcggccgcgcacacaagaggatccagtacaac 220 || ||||| |||||||||||||||||||| ||||| || |||||| | || |||||||| Sbjct: 139134 gctaagcaagacaagaagaagcagccccgtggccgtgctcacaagcgtatgcagtacaat 139075 Query: 221 cgccgcttcgtcaccgc 237 ||| | ||||||||||| Sbjct: 139074 cgcagattcgtcaccgc 139058
>ref|NM_127533.1| Arabidopsis thaliana structural constituent of ribosome (AT2G19750) mRNA, complete cds Length = 189 Score = 73.8 bits (37), Expect = 5e-10 Identities = 151/189 (79%) Strand = Plus / Plus Query: 98 atgggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaag 157 ||||| ||||| ||||| || |||| |||||||| |||||| | || ||||| || || Sbjct: 1 atgggaaaggtccacggttcattggctcgtgccggtaaggtgagaggtcagacacctaaa 60 Query: 158 gtggcgaagcaggacaagaagaagcagccccgcggccgcgcacacaagaggatccagtac 217 ||||| |||||||||||||||||| |||| || || || || || ||| | | || || Sbjct: 61 gtggctaagcaggacaagaagaagaagcctcgtggtcgtgctcataagcgtctgcaacac 120 Query: 218 aaccgccgcttcgtcaccgccgtcgtcggcttcggcaagaagcgcggccccaactcctcc 277 |||||||| |||||||||||||| || || || ||||||||| | || || ||||| || Sbjct: 121 aaccgccgtttcgtcaccgccgttgttggttttggcaagaagagaggaccaaactcatca 180 Query: 278 gagaagtag 286 ||||||||| Sbjct: 181 gagaagtag 189
>gb|AY232248.1| Drosophila yakuba clone yak-ad_CG15697 mRNA sequence Length = 396 Score = 73.8 bits (37), Expect = 5e-10 Identities = 70/81 (86%) Strand = Plus / Plus Query: 101 ggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtg 160 |||||||||||||| || |||||||||||||| ||||| || |||||||||||||| Sbjct: 214 ggtaaggtgcacggttctctggcccgtgccggcaaggtcaagggacagacgcccaaggta 273 Query: 161 gcgaagcaggacaagaagaag 181 | ||||||||| ||||||||| Sbjct: 274 gagaagcaggagaagaagaag 294 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Plus Query: 206 aggatccagtacaaccgccgcttcgtca 233 |||||||||||||||||||| ||||||| Sbjct: 319 aggatccagtacaaccgccggttcgtca 346
>gb|AY231796.1| Drosophila yakuba clone yak-em_CG15697 mRNA sequence Length = 396 Score = 73.8 bits (37), Expect = 5e-10 Identities = 70/81 (86%) Strand = Plus / Plus Query: 101 ggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtg 160 |||||||||||||| || |||||||||||||| ||||| || |||||||||||||| Sbjct: 214 ggtaaggtgcacggttctctggcccgtgccggcaaggtcaagggacagacgcccaaggta 273 Query: 161 gcgaagcaggacaagaagaag 181 | ||||||||| ||||||||| Sbjct: 274 gagaagcaggagaagaagaag 294 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Plus Query: 206 aggatccagtacaaccgccgcttcgtca 233 |||||||||||||||||||| ||||||| Sbjct: 319 aggatccagtacaaccgccggttcgtca 346
>gb|AY061910.1| Arabidopsis thaliana At2g19750/F6F22.22 mRNA, complete cds Length = 189 Score = 73.8 bits (37), Expect = 5e-10 Identities = 151/189 (79%) Strand = Plus / Plus Query: 98 atgggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaag 157 ||||| ||||| ||||| || |||| |||||||| |||||| | || ||||| || || Sbjct: 1 atgggaaaggtccacggttcattggctcgtgccggtaaggtgagaggtcagacacctaaa 60 Query: 158 gtggcgaagcaggacaagaagaagcagccccgcggccgcgcacacaagaggatccagtac 217 ||||| |||||||||||||||||| |||| || || || || || ||| | | || || Sbjct: 61 gtggctaagcaggacaagaagaagaagcctcgtggtcgtgctcataagcgtctgcaacac 120 Query: 218 aaccgccgcttcgtcaccgccgtcgtcggcttcggcaagaagcgcggccccaactcctcc 277 |||||||| |||||||||||||| || || || ||||||||| | || || ||||| || Sbjct: 121 aaccgccgtttcgtcaccgccgttgttggttttggcaagaagagaggaccaaactcatca 180 Query: 278 gagaagtag 286 ||||||||| Sbjct: 181 gagaagtag 189
>gb|AY052341.1| Arabidopsis thaliana At2g19750/F6F22.22 mRNA, complete cds Length = 552 Score = 73.8 bits (37), Expect = 5e-10 Identities = 151/189 (79%) Strand = Plus / Plus Query: 98 atgggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaag 157 ||||| ||||| ||||| || |||| |||||||| |||||| | || ||||| || || Sbjct: 80 atgggaaaggtccacggttcattggctcgtgccggtaaggtgagaggtcagacacctaaa 139 Query: 158 gtggcgaagcaggacaagaagaagcagccccgcggccgcgcacacaagaggatccagtac 217 ||||| |||||||||||||||||| |||| || || || || || ||| | | || || Sbjct: 140 gtggctaagcaggacaagaagaagaagcctcgtggtcgtgctcataagcgtctgcaacac 199 Query: 218 aaccgccgcttcgtcaccgccgtcgtcggcttcggcaagaagcgcggccccaactcctcc 277 |||||||| |||||||||||||| || || || ||||||||| | || || ||||| || Sbjct: 200 aaccgccgtttcgtcaccgccgttgttggttttggcaagaagagaggaccaaactcatca 259 Query: 278 gagaagtag 286 ||||||||| Sbjct: 260 gagaagtag 268
>gb|AY088766.1| Arabidopsis thaliana clone 9466 mRNA, complete sequence Length = 516 Score = 73.8 bits (37), Expect = 5e-10 Identities = 151/189 (79%) Strand = Plus / Plus Query: 98 atgggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaag 157 ||||| ||||| ||||| || |||| |||||||| |||||| | || ||||| || || Sbjct: 84 atgggaaaggtccacggttcattggctcgtgccggtaaggtgagaggtcagacacctaaa 143 Query: 158 gtggcgaagcaggacaagaagaagcagccccgcggccgcgcacacaagaggatccagtac 217 ||||| |||||||||||||||||| |||| || || || || || ||| | | || || Sbjct: 144 gtggctaagcaggacaagaagaagaagcctcgtggtcgtgctcataagcgtctgcaacac 203 Query: 218 aaccgccgcttcgtcaccgccgtcgtcggcttcggcaagaagcgcggccccaactcctcc 277 |||||||| |||||||||||||| || || || ||||||||| | || || ||||| || Sbjct: 204 aaccgccgtttcgtcaccgccgttgttggttttggcaagaagagaggaccaaactcatca 263 Query: 278 gagaagtag 286 ||||||||| Sbjct: 264 gagaagtag 272
>emb|BX822051.1|CNS0AA4U Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL94ZE07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 547 Score = 73.8 bits (37), Expect = 5e-10 Identities = 151/189 (79%) Strand = Plus / Plus Query: 98 atgggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaag 157 ||||| ||||| ||||| || |||| |||||||| |||||| | || ||||| || || Sbjct: 65 atgggaaaggtccacggttcattggctcgtgccggtaaggtgagaggtcagacacctaaa 124 Query: 158 gtggcgaagcaggacaagaagaagcagccccgcggccgcgcacacaagaggatccagtac 217 ||||| |||||||||||||||||| |||| || || || || || ||| | | || || Sbjct: 125 gtggctaagcaggacaagaagaagaagcctcgtggtcgtgctcataagcgtctgcaacac 184 Query: 218 aaccgccgcttcgtcaccgccgtcgtcggcttcggcaagaagcgcggccccaactcctcc 277 |||||||| |||||||||||||| || || || ||||||||| | || || ||||| || Sbjct: 185 aaccgccgtttcgtcaccgccgttgttggttttggcaagaagagaggaccaaactcatca 244 Query: 278 gagaagtag 286 ||||||||| Sbjct: 245 gagaagtag 253
>emb|CT986528.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 121 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 97 catgggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaa 156 |||||||||||| |||||||| ||||| || ||||| |||||| | |||||||||||||| Sbjct: 54 catgggtaaggtccacggatctctggctcgcgccggtaaggtgagagggcagacgcccaa 113 Query: 157 ggtggcga 164 ||| |||| Sbjct: 114 ggtcgcga 121
>gb|AC189438.1| Brassica rapa subsp. pekinensis clone KBrB069F08, complete sequence Length = 152313 Score = 67.9 bits (34), Expect = 3e-08 Identities = 106/130 (81%) Strand = Plus / Minus Query: 110 cacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtggcgaagcag 169 |||||||| |||| |||||||| |||||| | || ||||| || ||||| |||||||| Sbjct: 122978 cacggatctttggcacgtgccggtaaggtgagaggacagacaccaaaggtagcgaagcaa 122919 Query: 170 gacaagaagaagcagccccgcggccgcgcacacaagaggatccagtacaaccgccgcttc 229 |||||||||||| | ||| | || || || |||||| | ||||| |||||||||| ||| Sbjct: 122918 gacaagaagaagaaacccagaggacgtgcccacaagcgtctccagcacaaccgccgtttc 122859 Query: 230 gtcaccgccg 239 || ||||||| Sbjct: 122858 gttaccgccg 122849
>gb|AC074259.14| Trypanosoma brucei chromosome 6 clone RPCI93-4M18, complete sequence Length = 160865 Score = 67.9 bits (34), Expect = 3e-08 Identities = 79/94 (84%) Strand = Plus / Minus Query: 96 acatgggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgccca 155 ||||||| ||||| ||||||||||||||||||||||| |||||| |||||||| | Sbjct: 38277 acatggggaaggtccacggatcgctggcccgtgccggcaaggtgaaaaaccagacgccga 38218 Query: 156 aggtggcgaagcaggacaagaagaagcagccccg 189 |||| |||||||| ||||||||||||||||| Sbjct: 38217 aggttagcaagcaggagaagaagaagcagccccg 38184 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Minus Query: 98 atgggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaag 157 ||||| ||||| ||||||||||||||||| ||||| |||||| |||||||| ||| Sbjct: 37809 atggggaaggtccacggatcgctggcccgcgccggcaaggtgaaaaaccagacgccgaag 37750 Query: 158 gtggcgaagcaggacaagaagaagcagccccg 189 || |||||||| ||||||||||||||||| Sbjct: 37749 gttagcaagcaggagaagaagaagcagccccg 37718
>emb|BX821809.1|CNS0A8DZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL76ZD07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 583 Score = 65.9 bits (33), Expect = 1e-07 Identities = 150/189 (79%) Strand = Plus / Plus Query: 98 atgggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaag 157 ||||| ||||| ||||| || |||| |||||||| |||||| | || ||||| || || Sbjct: 63 atgggaaaggtccacggttcattggctcgtgccggtaaggtgagaggtcagacacctaaa 122 Query: 158 gtggcgaagcaggacaagaagaagcagccccgcggccgcgcacacaagaggatccagtac 217 ||||| |||||||||||||||||| |||| || || || || | ||| | | || || Sbjct: 123 gtggctaagcaggacaagaagaagaagcctcgtggtcgtgctaataagcgtctgcaacac 182 Query: 218 aaccgccgcttcgtcaccgccgtcgtcggcttcggcaagaagcgcggccccaactcctcc 277 |||||||| |||||||||||||| || || || ||||||||| | || || ||||| || Sbjct: 183 aaccgccgtttcgtcaccgccgttgttggttttggcaagaagagaggaccaaactcatca 242 Query: 278 gagaagtag 286 ||||||||| Sbjct: 243 gagaagtag 251
>ref|XM_840239.1| Trypanosoma brucei TREU927 chromosome 6 Length = 201 Score = 63.9 bits (32), Expect = 5e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 98 atgggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaag 157 ||||| ||||| ||||||||||||||||||||||| |||||| |||||||| ||| Sbjct: 1 atggggaaggtccacggatcgctggcccgtgccggcaaggtgaaaaaccagacgccgaag 60 Query: 158 gtggcgaagcaggacaagaagaagcagccccg 189 || |||||||| ||||||||||||||||| Sbjct: 61 gttagcaagcaggagaagaagaagcagccccg 92
>emb|CT981964.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 295 Score = 63.9 bits (32), Expect = 5e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 207 ggatccagtacaaccgccgcttcgtcaccgccgtcgtcggcttcggcaagaagcgcggcc 266 |||| ||||||||||||||||||||||||||| | || ||||| || || || | |||| Sbjct: 16 ggatgcagtacaaccgccgcttcgtcaccgccattgttggctttgggaaaaaaaggggcc 75 Query: 267 ccaactcctccgagaa 282 ||||||| |||||||| Sbjct: 76 ccaactcgtccgagaa 91
>ref|XM_821669.1| Trypanosoma brucei TREU927 clone RPCI93-4M18 40S ribosomal protein S30 (Tb927.6.2110) partial mRNA Length = 201 Score = 63.9 bits (32), Expect = 5e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 98 atgggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaag 157 ||||| ||||| ||||||||||||||||||||||| |||||| |||||||| ||| Sbjct: 1 atggggaaggtccacggatcgctggcccgtgccggcaaggtgaaaaaccagacgccgaag 60 Query: 158 gtggcgaagcaggacaagaagaagcagccccg 189 || |||||||| ||||||||||||||||| Sbjct: 61 gttagcaagcaggagaagaagaagcagccccg 92
>emb|BX819364.1|CNS0AA8V Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB71ZF10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 536 Score = 60.0 bits (30), Expect = 8e-06 Identities = 129/162 (79%) Strand = Plus / Plus Query: 98 atgggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaag 157 ||||| ||||| ||||| || |||| |||||||| |||||| | | ||||| || || Sbjct: 54 atgggaaaggtccacggttcattggctcgtgccggtaaggtgagaagtcagacacctaaa 113 Query: 158 gtggcgaagcaggacaagaagaagcagccccgcggccgcgcacacaagaggatccagtac 217 ||||| |||||||||||||||||| |||| || || || || || ||| | | || || Sbjct: 114 gtggctaagcaggacaagaagaagaagcctcgtggtcgtgctcataagcgtctacaacac 173 Query: 218 aaccgccgcttcgtcaccgccgtcgtcggcttcggcaagaag 259 |||||||| |||||||||||||| || || || ||||||||| Sbjct: 174 aaccgccgtttcgtcaccgccgttgttggttttggcaagaag 215
>gb|AY696634.1| Pagrus major clone cmcon042 microsatellite sequence Length = 532 Score = 58.0 bits (29), Expect = 3e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 101 ggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtg 160 |||||||| ||||| || |||||||||||||| || ||| | || ||||| |||||||| Sbjct: 252 ggtaaggtccacggttctctggcccgtgccggaaaagtgaggggacagacacccaaggtt 311 Query: 161 gcgaagcaggacaagaagaag 181 | |||||||| ||||||||| Sbjct: 312 gacaagcaggagaagaagaag 332
>gb|DQ011062.1| Oreochromis mossambicus 40S ribosomal protein S30-like mRNA, partial sequence Length = 363 Score = 58.0 bits (29), Expect = 3e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 101 ggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtg 160 |||||||| ||||| || |||||||||||||| || ||||| || ||||| ||||| || Sbjct: 247 ggtaaggttcacggctctctggcccgtgccggaaaagtgcggggacagactcccaaagtc 306 Query: 161 gcgaagcaggacaagaagaag 181 | |||||||| ||||||||| Sbjct: 307 gataagcaggagaagaagaag 327
>gb|AY357069.1| Hippocampus comes 40S ribosomal protein S30 mRNA, complete cds Length = 542 Score = 58.0 bits (29), Expect = 3e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 101 ggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtg 160 |||||||| ||||| || ||||||||||| || || ||| | || ||||| ||||||||| Sbjct: 250 ggtaaggtccacggctctctggcccgtgctggaaaagtgagaggccagacccccaaggtg 309 Query: 161 gcgaagcaggacaagaagaag 181 | |||||||| ||||||||| Sbjct: 310 gataagcaggagaagaagaag 330 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 209 atccagtacaaccgccgcttcgtca 233 |||||||||||||| |||||||||| Sbjct: 358 atccagtacaaccgacgcttcgtca 382
>ref|XM_840238.1| Trypanosoma brucei TREU927 chromosome 6 Length = 201 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 98 atgggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaag 157 ||||| ||||| ||||||||||||||||| ||||| |||||| |||||||| ||| Sbjct: 1 atggggaaggtccacggatcgctggcccgcgccggcaaggtgaaaaaccagacgccgaag 60 Query: 158 gtggcgaagcaggacaagaagaagcagccccg 189 || |||||||| ||||||||||||||||| Sbjct: 61 gttagcaagcaggagaagaagaagcagccccg 92
>gb|AC138087.17| Medicago truncatula clone mth2-22p8, complete sequence Length = 130194 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 164 aagcaggacaagaagaagcagccccgcggccgcgcacacaagaggatccagtacaaccgc 223 ||||| ||||||||||||||||| || || || || |||||| | || || ||||| ||| Sbjct: 17978 aagcaagacaagaagaagcagccacgtggacgtgctcacaagcgtatgcaatacaatcgc 18037 Query: 224 cgcttcgtcaccgccg 239 || ||||||||||||| Sbjct: 18038 cgtttcgtcaccgccg 18053
>ref|XM_821618.1| Trypanosoma brucei TREU927 clone RPCI93-4M18 40S ribosomal protein S30 (Tb927.6.2100) partial mRNA Length = 201 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 98 atgggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaag 157 ||||| ||||| ||||||||||||||||| ||||| |||||| |||||||| ||| Sbjct: 1 atggggaaggtccacggatcgctggcccgcgccggcaaggtgaaaaaccagacgccgaag 60 Query: 158 gtggcgaagcaggacaagaagaagcagccccg 189 || |||||||| ||||||||||||||||| Sbjct: 61 gttagcaagcaggagaagaagaagcagccccg 92
>gb|AC005169.3| Arabidopsis thaliana chromosome 2 clone F6F22 map mi148, complete sequence Length = 126386 Score = 56.0 bits (28), Expect = 1e-04 Identities = 97/120 (80%) Strand = Plus / Minus Query: 120 tggcccgtgccgggaaggtgcgcgggcagacgcccaaggtggcgaagcaggacaagaaga 179 |||| |||||||| |||||| | || ||||| || || ||||| |||||||||||||||| Sbjct: 108223 tggctcgtgccggtaaggtgagaggtcagacacctaaagtggctaagcaggacaagaaga 108164 Query: 180 agcagccccgcggccgcgcacacaagaggatccagtacaaccgccgcttcgtcaccgccg 239 || |||| || || || || || ||| | | || |||||||||| ||||||||||||| Sbjct: 108163 agaagcctcgtggtcgtgctcataagcgtctgcaacacaaccgccgtttcgtcaccgccg 108104
>ref|NM_174731.3| Bos taurus Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived); ribosomal protein S30 (FAU), mRNA gb|BC102873.1| Bos taurus Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived); ribosomal protein S30, mRNA (cDNA clone MGC:128133 IMAGE:7944155), complete cds Length = 635 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 119 ctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtggcgaagcaggacaagaag 178 ||||||||||| ||||| ||| | || ||||| ||||||||||| ||||| || |||||| Sbjct: 349 ctggcccgtgctgggaaagtgagaggtcagactcccaaggtggccaagcaagagaagaag 408 Query: 179 aag 181 ||| Sbjct: 409 aag 411
>gb|AF520959.1| Bos taurus ubiquitin-like/S30 ribosomal fusion protein mRNA, complete cds Length = 482 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 119 ctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtggcgaagcaggacaagaag 178 ||||||||||| ||||| ||| | || ||||| ||||||||||| ||||| || |||||| Sbjct: 271 ctggcccgtgctgggaaagtgagaggtcagactcccaaggtggccaagcaagagaagaag 330 Query: 179 aag 181 ||| Sbjct: 331 aag 333
>gb|AY911375.1| Bos taurus clone IMAGE:7961514 ubiquitin-like/S30 ribosomal fusion protein mRNA, complete cds Length = 404 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 119 ctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtggcgaagcaggacaagaag 178 ||||||||||| ||||| ||| | || ||||| ||||||||||| ||||| || |||||| Sbjct: 193 ctggcccgtgctgggaaagtgagaggtcagactcccaaggtggccaagcaagagaagaag 252 Query: 179 aag 181 ||| Sbjct: 253 aag 255
>ref|NM_213937.1| Sus scrofa ubiquitin-like/S30 ribosomal fusion protein (FAU), mRNA gb|U72543.1|SSU72543 Sus scrofa ubiquitin-like/S30 ribosomal fusion protein (fau) mRNA, complete cds Length = 499 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 119 ctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtggcgaagcaggacaagaag 178 ||||||||||| ||||| ||| | || ||||| ||||||||||| || ||||| |||||| Sbjct: 288 ctggcccgtgctgggaaagtgagaggtcagactcccaaggtggccaaacaggagaagaag 347 Query: 179 aag 181 ||| Sbjct: 348 aag 350
>gb|DQ848924.1| Scophthalmus maximus clone kac16 40S ribosomal protein S30 mRNA, partial cds Length = 361 Score = 50.1 bits (25), Expect = 0.008 Identities = 67/81 (82%) Strand = Plus / Plus Query: 101 ggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtg 160 |||||||| ||||| || |||||||||||||| || ||| | || ||||| |||||||| Sbjct: 37 ggtaaggtccacggctctctggcccgtgccggaaaagtgaggggacagacacccaaggtt 96 Query: 161 gcgaagcaggacaagaagaag 181 | |||||||| || |||||| Sbjct: 97 gacaagcaggagaaaaagaag 117
>emb|BX064327.1|CNS09LSR Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC46CC04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 727 Score = 50.1 bits (25), Expect = 0.008 Identities = 67/81 (82%) Strand = Plus / Plus Query: 101 ggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtg 160 |||||||||||||| ||||| ||||||||||| || ||| || || ||||||||||| Sbjct: 302 ggtaaggtgcacggttcgctcgcccgtgccggcaaagtgaagggacaaacgcccaaggtc 361 Query: 161 gcgaagcaggacaagaagaag 181 | ||| |||| ||||||||| Sbjct: 362 gaaaagaaggaaaagaagaag 382
>emb|BX048818.1|CNS099TY Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC24BA11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 631 Score = 50.1 bits (25), Expect = 0.008 Identities = 67/81 (82%) Strand = Plus / Minus Query: 101 ggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtg 160 |||||||||||||| ||||| ||||||||||| || ||| || || ||||||||||| Sbjct: 390 ggtaaggtgcacggttcgctcgcccgtgccggcaaagtgaagggacaaacgcccaaggtc 331 Query: 161 gcgaagcaggacaagaagaag 181 | ||| |||| ||||||||| Sbjct: 330 gaaaagaaggaaaagaagaag 310
>emb|BX044197.1|CNS0969L Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC17CE09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 693 Score = 50.1 bits (25), Expect = 0.008 Identities = 67/81 (82%) Strand = Plus / Plus Query: 101 ggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtg 160 |||||||||||||| ||||| ||||||||||| || ||| || || ||||||||||| Sbjct: 272 ggtaaggtgcacggttcgctcgcccgtgccggcaaagtgaagggacaaacgcccaaggtc 331 Query: 161 gcgaagcaggacaagaagaag 181 | ||| |||| ||||||||| Sbjct: 332 gaaaagaaggaaaagaagaag 352
>emb|BX040902.1|CNS093Q2 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC11DH12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 707 Score = 50.1 bits (25), Expect = 0.008 Identities = 67/81 (82%) Strand = Plus / Plus Query: 101 ggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtg 160 |||||||||||||| ||||| ||||||||||| || ||| || || ||||||||||| Sbjct: 283 ggtaaggtgcacggttcgctcgcccgtgccggcaaagtgaagggacaaacgcccaaggtc 342 Query: 161 gcgaagcaggacaagaagaag 181 | ||| |||| ||||||||| Sbjct: 343 gaaaagaaggaaaagaagaag 363
>emb|BX034577.1|CNS08YUD Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA50CB11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 441 Score = 50.1 bits (25), Expect = 0.008 Identities = 67/81 (82%) Strand = Plus / Plus Query: 101 ggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtg 160 |||||||||||||| ||||| ||||||||||| || ||| || || ||||||||||| Sbjct: 267 ggtaaggtgcacggttcgctcgcccgtgccggcaaagtgaagggacaaacgcccaaggtc 326 Query: 161 gcgaagcaggacaagaagaag 181 | ||| |||| ||||||||| Sbjct: 327 gaaaagaaggaaaagaagaag 347
>emb|BX030335.1|CNS08VKJ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA45BB09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 718 Score = 50.1 bits (25), Expect = 0.008 Identities = 67/81 (82%) Strand = Plus / Plus Query: 101 ggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtg 160 |||||||||||||| ||||| ||||||||||| || ||| || || ||||||||||| Sbjct: 275 ggtaaggtgcacggttcgctcgcccgtgccggcaaagtgaagggacaaacgcccaaggtc 334 Query: 161 gcgaagcaggacaagaagaag 181 | ||| |||| ||||||||| Sbjct: 335 gaaaagaaggaaaagaagaag 355
>emb|BX025808.1|CNS08S2S Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA39CF10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 710 Score = 50.1 bits (25), Expect = 0.008 Identities = 67/81 (82%) Strand = Plus / Plus Query: 101 ggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtg 160 |||||||||||||| ||||| ||||||||||| || ||| || || ||||||||||| Sbjct: 294 ggtaaggtgcacggttcgctcgcccgtgccggcaaagtgaagggacaaacgcccaaggtc 353 Query: 161 gcgaagcaggacaagaagaag 181 | ||| |||| ||||||||| Sbjct: 354 gaaaagaaggaaaagaagaag 374
>emb|BX026461.1|CNS08SKX Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA4DA05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 660 Score = 50.1 bits (25), Expect = 0.008 Identities = 67/81 (82%) Strand = Plus / Plus Query: 101 ggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtg 160 |||||||||||||| ||||| ||||||||||| || ||| || || ||||||||||| Sbjct: 237 ggtaaggtgcacggttcgctcgcccgtgccggcaaagtgaagggacaaacgcccaaggtc 296 Query: 161 gcgaagcaggacaagaagaag 181 | ||| |||| ||||||||| Sbjct: 297 gaaaagaaggaaaagaagaag 317
>emb|BX025321.1|CNS08RP9 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA38DC11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 549 Score = 50.1 bits (25), Expect = 0.008 Identities = 67/81 (82%) Strand = Plus / Plus Query: 101 ggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtg 160 |||||||||||||| ||||| ||||||||||| || ||| || || ||||||||||| Sbjct: 204 ggtaaggtgcacggttcgctcgcccgtgccggcaaagtgaagggacaaacgcccaaggtc 263 Query: 161 gcgaagcaggacaagaagaag 181 | ||| |||| ||||||||| Sbjct: 264 gaaaagaaggaaaagaagaag 284
>emb|BX025277.1|CNS08RO1 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA38DA08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 497 Score = 50.1 bits (25), Expect = 0.008 Identities = 67/81 (82%) Strand = Plus / Plus Query: 101 ggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtg 160 |||||||||||||| ||||| ||||||||||| || ||| || || ||||||||||| Sbjct: 159 ggtaaggtgcacggttcgctcgcccgtgccggcaaagtgaagggacaaacgcccaaggtc 218 Query: 161 gcgaagcaggacaagaagaag 181 | ||| |||| ||||||||| Sbjct: 219 gaaaagaaggaaaagaagaag 239
>emb|BX024620.1|CNS08R5S Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA37CE01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 659 Score = 50.1 bits (25), Expect = 0.008 Identities = 67/81 (82%) Strand = Plus / Plus Query: 101 ggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtg 160 |||||||||||||| ||||| ||||||||||| || ||| || || ||||||||||| Sbjct: 245 ggtaaggtgcacggttcgctcgcccgtgccggcaaagtgaagggacaaacgcccaaggtc 304 Query: 161 gcgaagcaggacaagaagaag 181 | ||| |||| ||||||||| Sbjct: 305 gaaaagaaggaaaagaagaag 325
>emb|BX015266.1|CNS08JXY Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA22DH02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 682 Score = 50.1 bits (25), Expect = 0.008 Identities = 67/81 (82%) Strand = Plus / Plus Query: 101 ggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtg 160 |||||||||||||| ||||| ||||||||||| || ||| || || ||||||||||| Sbjct: 270 ggtaaggtgcacggttcgctcgcccgtgccggcaaagtgaagggacaaacgcccaaggtc 329 Query: 161 gcgaagcaggacaagaagaag 181 | ||| |||| ||||||||| Sbjct: 330 gaaaagaaggaaaagaagaag 350
>emb|BX011328.1|CNS08GWK Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA18AE01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 571 Score = 50.1 bits (25), Expect = 0.008 Identities = 67/81 (82%) Strand = Plus / Plus Query: 101 ggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtg 160 |||||||||||||| ||||| ||||||||||| || ||| || || ||||||||||| Sbjct: 263 ggtaaggtgcacggttcgctcgcccgtgccggcaaagtgaagggacaaacgcccaaggtc 322 Query: 161 gcgaagcaggacaagaagaag 181 | ||| |||| ||||||||| Sbjct: 323 gaaaagaaggaaaagaagaag 343
>emb|BX009900.1|CNS08FSW Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA15DH12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 703 Score = 50.1 bits (25), Expect = 0.008 Identities = 67/81 (82%) Strand = Plus / Plus Query: 101 ggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtg 160 |||||||||||||| ||||| ||||||||||| || ||| || || ||||||||||| Sbjct: 272 ggtaaggtgcacggttcgctcgcccgtgccggcaaagtgaagggacaaacgcccaaggtc 331 Query: 161 gcgaagcaggacaagaagaag 181 | ||| |||| ||||||||| Sbjct: 332 gaaaagaaggaaaagaagaag 352
>emb|BX009795.1|CNS08FPZ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA15DC07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 705 Score = 50.1 bits (25), Expect = 0.008 Identities = 67/81 (82%) Strand = Plus / Plus Query: 101 ggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtg 160 |||||||||||||| ||||| ||||||||||| || ||| || || ||||||||||| Sbjct: 277 ggtaaggtgcacggttcgctcgcccgtgccggcaaagtgaagggacaaacgcccaaggtc 336 Query: 161 gcgaagcaggacaagaagaag 181 | ||| |||| ||||||||| Sbjct: 337 gaaaagaaggaaaagaagaag 357
>ref|XM_311180.2| Anopheles gambiae str. PEST ENSANGP00000019081 (ENSANGG00000016592), mRNA Length = 705 Score = 50.1 bits (25), Expect = 0.008 Identities = 67/81 (82%) Strand = Plus / Plus Query: 101 ggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtg 160 |||||||||||||| ||||| ||||||||||| || ||| || || ||||||||||| Sbjct: 309 ggtaaggtgcacggttcgctcgcccgtgccggcaaagtgaagggacaaacgcccaaggtc 368 Query: 161 gcgaagcaggacaagaagaag 181 | ||| |||| ||||||||| Sbjct: 369 gaaaagaaggaaaagaagaag 389
>gb|BT028640.1| Gasterosteus aculeatus clone CNB269-B09 mRNA sequence Length = 564 Score = 48.1 bits (24), Expect = 0.030 Identities = 66/80 (82%) Strand = Plus / Plus Query: 101 ggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtg 160 |||||||| ||||| || ||||||||||| || || ||| | || ||||| |||||||| Sbjct: 256 ggtaaggttcacggttctctggcccgtgctggaaaagtgaggggacagacacccaaggtt 315 Query: 161 gcgaagcaggacaagaagaa 180 | |||||||| |||||||| Sbjct: 316 gaaaagcaggagaagaagaa 335
>emb|BX820425.1|CNS0AA74 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH30ZH06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 539 Score = 48.1 bits (24), Expect = 0.030 Identities = 39/44 (88%) Strand = Plus / Plus Query: 216 acaaccgccgcttcgtcaccgccgtcgtcggcttcggcaagaag 259 |||||||||| |||||||||||||| || || || ||||||||| Sbjct: 185 acaaccgccgtttcgtcaccgccgttgttggttttggcaagaag 228
>emb|AJ320240.1|PSP320240 Polytomella sp. 'Pringsheim 198.80' mRNA for 40S ribosomal protein S30 (rs30 gene) Length = 351 Score = 48.1 bits (24), Expect = 0.030 Identities = 69/84 (82%) Strand = Plus / Plus Query: 98 atgggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaag 157 ||||||||||| ||||| || || || |||||||| ||||| ||||| ||||| || ||| Sbjct: 8 atgggtaaggttcacggttcccttgctcgtgccggtaaggttcgcggtcagacccctaag 67 Query: 158 gtggcgaagcaggacaagaagaag 181 || || || || || ||||||||| Sbjct: 68 gtcgccaaacaagagaagaagaag 91
>ref|XM_001080119.1| PREDICTED: Rattus norvegicus similar to Finkel-Biskis-Reilly murine sarcoma virusubiquitously expressed (LOC687780), mRNA Length = 514 Score = 46.1 bits (23), Expect = 0.12 Identities = 53/63 (84%) Strand = Plus / Plus Query: 119 ctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtggcgaagcaggacaagaag 178 ||||| ||||| ||||| ||| | || ||||| ||||||||||| || ||||| |||||| Sbjct: 277 ctggctcgtgctgggaaagtgagaggtcagactcccaaggtggccaaacaggaaaagaag 336 Query: 179 aag 181 ||| Sbjct: 337 aag 339
>ref|XM_001052979.1| PREDICTED: Rattus norvegicus Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived) protein (Fau), mRNA Length = 516 Score = 46.1 bits (23), Expect = 0.12 Identities = 53/63 (84%) Strand = Plus / Plus Query: 119 ctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtggcgaagcaggacaagaag 178 ||||| ||||| ||||| ||| | || ||||| ||||||||||| || ||||| |||||| Sbjct: 306 ctggctcgtgctgggaaagtgagaggtcagactcccaaggtggccaaacaggaaaagaag 365 Query: 179 aag 181 ||| Sbjct: 366 aag 368
>ref|XM_001114370.1| PREDICTED: Macaca mulatta similar to Finkel-Biskis-Reilly murine sarcoma virusubiquitously expressed (LOC716761), mRNA Length = 566 Score = 46.1 bits (23), Expect = 0.12 Identities = 53/63 (84%) Strand = Plus / Plus Query: 119 ctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtggcgaagcaggacaagaag 178 ||||||||||| ||||| ||| | || ||||| || |||||||| || ||||| |||||| Sbjct: 351 ctggcccgtgctgggaaagtgagaggtcagactcctaaggtggccaaacaggagaagaag 410 Query: 179 aag 181 ||| Sbjct: 411 aag 413
>ref|XM_861588.1| PREDICTED: Canis familiaris similar to Finkel-Biskis-Reilly murine sarcoma virusubiquitously expressed, transcript variant 3 (LOC483748), mRNA Length = 765 Score = 46.1 bits (23), Expect = 0.12 Identities = 53/63 (84%) Strand = Plus / Plus Query: 119 ctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtggcgaagcaggacaagaag 178 ||||||||||| ||||| || | |||||||| ||||||||||| || ||||| || ||| Sbjct: 557 ctggcccgtgctgggaaagtaagagggcagactcccaaggtggccaaacaggagaaaaag 616 Query: 179 aag 181 ||| Sbjct: 617 aag 619
>ref|XM_861574.1| PREDICTED: Canis familiaris similar to Finkel-Biskis-Reilly murine sarcoma virusubiquitously expressed, transcript variant 2 (LOC483748), mRNA Length = 477 Score = 46.1 bits (23), Expect = 0.12 Identities = 53/63 (84%) Strand = Plus / Plus Query: 119 ctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtggcgaagcaggacaagaag 178 ||||||||||| ||||| || | |||||||| ||||||||||| || ||||| || ||| Sbjct: 269 ctggcccgtgctgggaaagtaagagggcagactcccaaggtggccaaacaggagaaaaag 328 Query: 179 aag 181 ||| Sbjct: 329 aag 331
>ref|XM_540869.2| PREDICTED: Canis familiaris similar to Finkel-Biskis-Reilly murine sarcoma virusubiquitously expressed, transcript variant 1 (LOC483748), mRNA Length = 612 Score = 46.1 bits (23), Expect = 0.12 Identities = 53/63 (84%) Strand = Plus / Plus Query: 119 ctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtggcgaagcaggacaagaag 178 ||||||||||| ||||| || | |||||||| ||||||||||| || ||||| || ||| Sbjct: 404 ctggcccgtgctgggaaagtaagagggcagactcccaaggtggccaaacaggagaaaaag 463 Query: 179 aag 181 ||| Sbjct: 464 aag 466
>emb|X62671.1|RRFUSP Rattus rattus mRNA for hybrid protein (ubiquitin-like protein/rps30) Length = 522 Score = 46.1 bits (23), Expect = 0.12 Identities = 53/63 (84%) Strand = Plus / Plus Query: 119 ctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtggcgaagcaggacaagaag 178 ||||| ||||| ||||| ||| | || ||||| ||||||||||| || ||||| |||||| Sbjct: 296 ctggctcgtgctgggaaagtgagaggtcagactcccaaggtggccaaacaggaaaagaag 355 Query: 179 aag 181 ||| Sbjct: 356 aag 358
>ref|NM_001012739.1| Rattus norvegicus Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived) protein (Fau), mRNA gb|BC091402.1| Rattus norvegicus Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived) protein, mRNA (cDNA clone MGC:109525 IMAGE:7324328), complete cds Length = 550 Score = 46.1 bits (23), Expect = 0.12 Identities = 53/63 (84%) Strand = Plus / Plus Query: 119 ctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtggcgaagcaggacaagaag 178 ||||| ||||| ||||| ||| | || ||||| ||||||||||| || ||||| |||||| Sbjct: 306 ctggctcgtgctgggaaagtgagaggtcagactcccaaggtggccaaacaggaaaagaag 365 Query: 179 aag 181 ||| Sbjct: 366 aag 368
>gb|AY674244.1| Ixodes pacificus clone IP_7_60_92_99_CLU 40S ribosomal protein S30 mRNA, complete cds Length = 402 Score = 44.1 bits (22), Expect = 0.47 Identities = 31/34 (91%) Strand = Plus / Plus Query: 209 atccagtacaaccgccgcttcgtcaccgccgtcg 242 |||||||||||| | |||||||||| |||||||| Sbjct: 322 atccagtacaacaggcgcttcgtcaacgccgtcg 355
>gb|DQ066328.1| Ixodes scapularis isolate IS-6-12L-102 40S ribosomal protein S30 mRNA, complete cds Length = 405 Score = 44.1 bits (22), Expect = 0.47 Identities = 31/34 (91%) Strand = Plus / Plus Query: 209 atccagtacaaccgccgcttcgtcaccgccgtcg 242 |||||||||||| | |||||||||| |||||||| Sbjct: 325 atccagtacaacaggcgcttcgtcaacgccgtcg 358
>gb|EF026161.1| Branchiostoma belcheri ribosomal protein S30 gene, complete cds Length = 402 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 209 atccagtacaaccgccgcttcgtca 233 |||||||||||||| |||||||||| Sbjct: 328 atccagtacaaccgacgcttcgtca 352
>ref|XM_001219466.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_00246) mRNA, complete cds Length = 6783 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 cggcaagaagcgcggccccaa 270 ||||||||||||||||||||| Sbjct: 1773 cggcaagaagcgcggccccaa 1793
>ref|XM_001209893.1| Aspergillus terreus NIH2624 predicted protein (ATEG_07207) mRNA, complete cds Length = 189 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 98 atgggtaaggtgcacggatcgctggcccgtgccgggaaggt 138 ||||||||||| |||||||| || |||||||| || ||||| Sbjct: 1 atgggtaaggttcacggatctctcgcccgtgcgggtaaggt 41
>ref|XM_001080915.1| PREDICTED: Rattus norvegicus similar to ubiquitin-like/S30 ribosomal fusion protein (predicted) (RGD1565317_predicted), mRNA Length = 498 Score = 42.1 bits (21), Expect = 1.8 Identities = 51/61 (83%) Strand = Plus / Plus Query: 119 ctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtggcgaagcaggacaagaag 178 ||||| ||||| ||||| ||| | || ||||| ||||||||||| || ||||| |||||| Sbjct: 296 ctggctcgtgctgggaaagtgagaggtcagactcccaaggtggccaaacaggaaaagaag 355 Query: 179 a 179 | Sbjct: 356 a 356
>ref|XM_343941.3| PREDICTED: Rattus norvegicus similar to ubiquitin-like/S30 ribosomal fusion protein (predicted) (RGD1565317_predicted), mRNA Length = 498 Score = 42.1 bits (21), Expect = 1.8 Identities = 51/61 (83%) Strand = Plus / Plus Query: 119 ctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtggcgaagcaggacaagaag 178 ||||| ||||| ||||| ||| | || ||||| ||||||||||| || ||||| |||||| Sbjct: 296 ctggctcgtgctgggaaagtgagaggtcagactcccaaggtggccaaacaggaaaagaag 355 Query: 179 a 179 | Sbjct: 356 a 356
>ref|XM_676882.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN8705.2), mRNA Length = 186 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 98 atgggtaaggtgcacggatcgctggcccgtgccgggaaggt 138 ||||||||||| |||||||| || |||||||| || ||||| Sbjct: 1 atgggtaaggttcacggatctctcgcccgtgcgggtaaggt 41
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 219 accgccgcttcgtcaccgccg 239 ||||||||||||||||||||| Sbjct: 885433 accgccgcttcgtcaccgccg 885413
>dbj|AB225962.1| Aspergillus oryzae cDNA, contig sequence: AoEST2818 Length = 568 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 98 atgggtaaggtgcacggatcgctggcccgtgccgggaaggt 138 ||||||||||| |||||||| || || |||||||| ||||| Sbjct: 112 atgggtaaggtccacggatccctcgctcgtgccggtaaggt 152
>ref|XM_385091.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG04915.1) partial mRNA Length = 189 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 98 atgggtaaggtgcacggatcgctggcccgtgccgggaaggt 138 |||||||| || |||||||| || ||||||||||| ||||| Sbjct: 1 atgggtaaagttcacggatctctcgcccgtgccggcaaggt 41
>ref|XM_753132.1| Ustilago maydis 521 hypothetical protein (UM02078.1) partial mRNA Length = 798 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 98 atgggtaaggtgcacggatcgctggcccgtgccgggaaggt 138 ||||||||||| |||||||| || || |||||||| ||||| Sbjct: 1 atgggtaaggttcacggatccctcgcgcgtgccggtaaggt 41
>ref|XM_742739.1| Aspergillus fumigatus Af293 ribosomal S30/ubiquitin fusion (Afu6g02450) partial mRNA Length = 189 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 98 atgggtaaggtgcacggatcgctggcccgtgccgggaaggt 138 ||||||||||| |||||||| || |||||||| || ||||| Sbjct: 1 atgggtaaggttcacggatctctcgcccgtgcgggtaaggt 41
>emb|BX018512.1|CNS08MG4 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA28AE01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 463 Score = 42.1 bits (21), Expect = 1.8 Identities = 66/81 (81%) Strand = Plus / Minus Query: 101 ggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtg 160 |||||||||||||| | ||| ||||||||||| || ||| || || ||||||||||| Sbjct: 340 ggtaaggtgcacggtttgctcgcccgtgccggcaaagtgaagggacaaacgcccaaggtc 281 Query: 161 gcgaagcaggacaagaagaag 181 | ||| |||| ||||||||| Sbjct: 280 gaaaagaaggaaaagaagaag 260
>emb|BX015735.1|CNS08KAZ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA23CE06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 319 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 104 aaggtgcacggatcgctggcccgtgccgg 132 ||||||||||| ||||| ||||||||||| Sbjct: 283 aaggtgcacggttcgctcgcccgtgccgg 311
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 225 gcttcgtcaccgccgtcgtcggcttcggc 253 |||||| ||||||||||||| |||||||| Sbjct: 7312343 gcttcgccaccgccgtcgtccgcttcggc 7312371
>emb|BX009796.1|CNS08FQ0 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA15DC07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 703 Score = 42.1 bits (21), Expect = 1.8 Identities = 66/81 (81%) Strand = Plus / Minus Query: 101 ggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtg 160 |||||||||||||| | ||| ||||||||||| || ||| || || ||||||||||| Sbjct: 373 ggtaaggtgcacggtttgctcgcccgtgccggcaaagtgaagggacaaacgcccaaggtc 314 Query: 161 gcgaagcaggacaagaagaag 181 | ||| |||| ||||||||| Sbjct: 313 gaaaagaaggaaaagaagaag 293
>emb|BX005733.1|CNS08CL5 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA1BE02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 702 Score = 42.1 bits (21), Expect = 1.8 Identities = 66/81 (81%) Strand = Plus / Plus Query: 101 ggtaaggtgcacggatcgctggcccgtgccgggaaggtgcgcgggcagacgcccaaggtg 160 |||||||||||||| ||||| |||||| |||| || ||| || || ||||||||||| Sbjct: 278 ggtaaggtgcacggttcgctcgcccgttccggcaaagtgaagggacaaacgcccaaggtc 337 Query: 161 gcgaagcaggacaagaagaag 181 | ||| |||| ||||||||| Sbjct: 338 gaaaagaaggaaaagaagaag 358
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 219 accgccgcttcgtcaccgccg 239 ||||||||||||||||||||| Sbjct: 916804 accgccgcttcgtcaccgccg 916784
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 243 tcggcttcggcaagaagcgcg 263 ||||||||||||||||||||| Sbjct: 1556180 tcggcttcggcaagaagcgcg 1556160
>ref|XM_001227082.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_09156) mRNA, complete cds Length = 1221 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 cgaagcaggacaagaagaag 181 |||||||||||||||||||| Sbjct: 1118 cgaagcaggacaagaagaag 1137
>gb|CP000463.1| Rhodopseudomonas palustris BisA53, complete genome Length = 5505494 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 ccgccgcttcgtcaccgccg 239 |||||||||||||||||||| Sbjct: 3306916 ccgccgcttcgtcaccgccg 3306935
>gb|CP000431.1| Rhodococcus sp. RHA1, complete genome Length = 7804765 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 ccgccgtcgtcggcttcggc 253 |||||||||||||||||||| Sbjct: 6514411 ccgccgtcgtcggcttcggc 6514430
>emb|BX908763.19| Zebrafish DNA sequence from clone DKEY-119O24 in linkage group 18, complete sequence Length = 170230 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 gcgaagcaggacaagaagaa 180 |||||||||||||||||||| Sbjct: 86755 gcgaagcaggacaagaagaa 86736
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 232 caccgccgtcgtcggcttcggcaa 255 ||||||||||| |||||||||||| Sbjct: 1164633 caccgccgtcgacggcttcggcaa 1164610
>gb|AC140279.4| Mus musculus BAC clone RP23-338N10 from chromosome 16, complete sequence Length = 211002 Score = 40.1 bits (20), Expect = 7.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 146 cagacgcccaaggtggcgaagcaggacaagaagaag 181 ||||| ||||||||||| || ||||| ||||||||| Sbjct: 105893 cagactcccaaggtggccaaacaggaaaagaagaag 105858
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 caccgccgtcgtcggcttcggcaa 255 ||||||||||| |||||||||||| Sbjct: 2350703 caccgccgtcgacggcttcggcaa 2350726
>ref|XM_452397.1| Kluyveromyces lactis NRRL Y-1140, KLLA0C04455g predicted mRNA Length = 1359 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tcgtttgatgttggaagaga 354 |||||||||||||||||||| Sbjct: 112 tcgtttgatgttggaagaga 131
>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence Length = 1212674 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 tcgtcaccgccgtcgtcggc 247 |||||||||||||||||||| Sbjct: 480561 tcgtcaccgccgtcgtcggc 480542
>gb|AC122509.2| Mus musculus BAC clone RP24-443G20 from chromosome 16, complete sequence Length = 178757 Score = 40.1 bits (20), Expect = 7.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 146 cagacgcccaaggtggcgaagcaggacaagaagaag 181 ||||| ||||||||||| || ||||| ||||||||| Sbjct: 3753 cagactcccaaggtggccaaacaggaaaagaagaag 3718
>gb|AY246705.1| Equus caballus ubiquitin-like/S30 ribosomal fusion protein mRNA, partial cds Length = 355 Score = 40.1 bits (20), Expect = 7.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 146 cagacgcccaaggtggcgaagcaggacaagaagaag 181 ||||| ||||||||||| |||||||| || |||||| Sbjct: 286 cagactcccaaggtggccaagcaggagaaaaagaag 321
>ref|XM_387967.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07791.1) partial mRNA Length = 648 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 gaaataaaaaaggctcttcc 315 |||||||||||||||||||| Sbjct: 278 gaaataaaaaaggctcttcc 259
>dbj|AK132752.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4922505D07 product:Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived), full insert sequence Length = 509 Score = 40.1 bits (20), Expect = 7.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 146 cagacgcccaaggtggcgaagcaggacaagaagaag 181 ||||| ||||||||||| || ||||| ||||||||| Sbjct: 330 cagactcccaaggtggccaaacaggaaaagaagaag 365
>gb|BC081463.1| Mus musculus Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived), mRNA (cDNA clone MGC:102152 IMAGE:6408436), complete cds Length = 507 Score = 40.1 bits (20), Expect = 7.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 146 cagacgcccaaggtggcgaagcaggacaagaagaag 181 ||||| ||||||||||| || ||||| ||||||||| Sbjct: 304 cagactcccaaggtggccaaacaggaaaagaagaag 339
>gb|BC062873.1| Mus musculus Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived), mRNA (cDNA clone MGC:86051 IMAGE:5683472), complete cds Length = 516 Score = 40.1 bits (20), Expect = 7.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 146 cagacgcccaaggtggcgaagcaggacaagaagaag 181 ||||| ||||||||||| || ||||| ||||||||| Sbjct: 316 cagactcccaaggtggccaaacaggaaaagaagaag 351
>gb|BC058691.1| Mus musculus Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived), mRNA (cDNA clone MGC:63322 IMAGE:6814998), complete cds Length = 528 Score = 40.1 bits (20), Expect = 7.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 146 cagacgcccaaggtggcgaagcaggacaagaagaag 181 ||||| ||||||||||| || ||||| ||||||||| Sbjct: 304 cagactcccaaggtggccaaacaggaaaagaagaag 339
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 118 gctggcccgtgccgggaaggtgcg 141 |||||||||| ||||||||||||| Sbjct: 5128959 gctggcccgttccgggaaggtgcg 5128936
>dbj|AK146359.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched library, clone:I730061G02 product:Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived), full insert sequence Length = 501 Score = 40.1 bits (20), Expect = 7.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 146 cagacgcccaaggtggcgaagcaggacaagaagaag 181 ||||| ||||||||||| || ||||| ||||||||| Sbjct: 323 cagactcccaaggtggccaaacaggaaaagaagaag 358
>dbj|AK152738.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830083H14 product:Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived), full insert sequence Length = 504 Score = 40.1 bits (20), Expect = 7.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 146 cagacgcccaaggtggcgaagcaggacaagaagaag 181 ||||| ||||||||||| || ||||| ||||||||| Sbjct: 325 cagactcccaaggtggccaaacaggaaaagaagaag 360
>dbj|AK151465.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830030H11 product:Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived), full insert sequence Length = 504 Score = 40.1 bits (20), Expect = 7.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 146 cagacgcccaaggtggcgaagcaggacaagaagaag 181 ||||| ||||||||||| || ||||| ||||||||| Sbjct: 325 cagactcccaaggtggccaaacaggaaaagaagaag 360
>dbj|AK151211.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830026O06 product:Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived), full insert sequence Length = 504 Score = 40.1 bits (20), Expect = 7.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 146 cagacgcccaaggtggcgaagcaggacaagaagaag 181 ||||| ||||||||||| || ||||| ||||||||| Sbjct: 325 cagactcccaaggtggccaaacaggaaaagaagaag 360
>dbj|AK168348.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched library, clone:I730096G08 product:Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived), full insert sequence Length = 504 Score = 40.1 bits (20), Expect = 7.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 146 cagacgcccaaggtggcgaagcaggacaagaagaag 181 ||||| ||||||||||| || ||||| ||||||||| Sbjct: 325 cagactcccaaggtggccaaacaggaaaagaagaag 360
>dbj|AK008466.1| Mus musculus adult male small intestine cDNA, RIKEN full-length enriched library, clone:2010206P06 product:Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived), full insert sequence Length = 473 Score = 40.1 bits (20), Expect = 7.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 146 cagacgcccaaggtggcgaagcaggacaagaagaag 181 ||||| ||||||||||| || ||||| ||||||||| Sbjct: 294 cagactcccaaggtggccaaacaggaaaagaagaag 329
>dbj|AK002355.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:0610008O06 product:MONOCLONAL NON-SPECIFIC SUPPRESSOR FACTOR BETA (FINKEL-BISKIS-REILLY MURINE SARCOMA VIRUS (FBR-MUSV) UBIQUITOUSLY EXPRESSED) (FOX DERIVED) homolog [Mus musculus], full insert sequence Length = 504 Score = 40.1 bits (20), Expect = 7.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 146 cagacgcccaaggtggcgaagcaggacaagaagaag 181 ||||| ||||||||||| || ||||| ||||||||| Sbjct: 325 cagactcccaaggtggccaaacaggaaaagaagaag 360
>emb|CR718602.2|CNS0GHF4 Tetraodon nigroviridis full-length cDNA Length = 586 Score = 40.1 bits (20), Expect = 7.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 101 ggtaaggtgcacggatcgctggcccgtgccgg 132 |||||||| ||||| || |||||||||||||| Sbjct: 297 ggtaaggttcacggctctctggcccgtgccgg 328
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 cccaccgccgccgtcgacat 99 |||||||||||||||||||| Sbjct: 6895998 cccaccgccgccgtcgacat 6895979
>emb|BX927394.14| Zebrafish DNA sequence from clone CH211-262I10 in linkage group 21, complete sequence Length = 164899 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 322 ctggtttcctctctcgtttgatgt 345 |||||||||||||| ||||||||| Sbjct: 112934 ctggtttcctctcttgtttgatgt 112911
>emb|AL355361.39| Human DNA sequence from clone RP11-58N22 on chromosome 10 Contains a CpG island, complete sequence Length = 153070 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 tgagtatgatgcatgtttgg 449 |||||||||||||||||||| Sbjct: 34944 tgagtatgatgcatgtttgg 34963
>emb|BX026462.1|CNS08SKY Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA4DA05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 241 Score = 40.1 bits (20), Expect = 7.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 101 ggtaaggtgcacggatcgctggcccgtgccgg 132 |||||||||||||| ||| | ||||||||||| Sbjct: 202 ggtaaggtgcacggttcgttcgcccgtgccgg 171
>emb|CR536616.7| Zebrafish DNA sequence from clone CH211-264E16 in linkage group 18, complete sequence Length = 154119 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 377 ttgttaaagtatgcatcttt 396 |||||||||||||||||||| Sbjct: 90941 ttgttaaagtatgcatcttt 90960
>ref|NM_007990.1| Mus musculus Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived) (Fau), mRNA Length = 509 Score = 40.1 bits (20), Expect = 7.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 146 cagacgcccaaggtggcgaagcaggacaagaagaag 181 ||||| ||||||||||| || ||||| ||||||||| Sbjct: 326 cagactcccaaggtggccaaacaggaaaagaagaag 361
>emb|X65922.1|MMFAU M.musculus fau mRNA Length = 505 Score = 40.1 bits (20), Expect = 7.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 146 cagacgcccaaggtggcgaagcaggacaagaagaag 181 ||||| ||||||||||| || ||||| ||||||||| Sbjct: 312 cagactcccaaggtggccaaacaggaaaagaagaag 347
>emb|CR382123.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome C of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1753957 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tcgtttgatgttggaagaga 354 |||||||||||||||||||| Sbjct: 408201 tcgtttgatgttggaagaga 408220
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 232 caccgccgtcgtcggcttcggcaa 255 ||||||||||| |||||||||||| Sbjct: 2033861 caccgccgtcgacggcttcggcaa 2033838
>emb|BX004775.13| Zebrafish DNA sequence from clone CH211-134D7 in linkage group 20 Contains five CpG islands, complete sequence Length = 101101 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 gcgaagcaggacaagaagaa 180 |||||||||||||||||||| Sbjct: 44544 gcgaagcaggacaagaagaa 44563
>dbj|AP005534.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0030M21 Length = 155970 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 cgcgccgagaaataaaaaag 307 |||||||||||||||||||| Sbjct: 154011 cgcgccgagaaataaaaaag 154030
>gb|K02712.2|MSVMUSV FBR murine osteosarcoma, complete proviral sequence integrated in Rattus norvegicus genome Length = 3811 Score = 40.1 bits (20), Expect = 7.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 146 cagacgcccaaggtggcgaagcaggacaagaagaag 181 ||||| ||||||||||| || ||||| ||||||||| Sbjct: 2885 cagactcccaaggtggccaaacaggaaaagaagaag 2850
>gb|AC008719.7| Homo sapiens chromosome 5 clone CTB-88B3, complete sequence Length = 54495 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 gaaggatctgggatatttgt 425 |||||||||||||||||||| Sbjct: 14010 gaaggatctgggatatttgt 14029
>dbj|AP004572.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0668C05 Length = 142081 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 cccaccgccgccgtcgacat 99 |||||||||||||||||||| Sbjct: 19813 cccaccgccgccgtcgacat 19794
>dbj|AP005532.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0010K08 Length = 184760 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 cgcgccgagaaataaaaaag 307 |||||||||||||||||||| Sbjct: 17808 cgcgccgagaaataaaaaag 17827
>gb|AF147745.1|AF147745 Mus musculus monoclonal non-specific suppressor factor beta mRNA, complete cds Length = 558 Score = 40.1 bits (20), Expect = 7.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 146 cagacgcccaaggtggcgaagcaggacaagaagaag 181 ||||| ||||||||||| || ||||| ||||||||| Sbjct: 378 cagactcccaaggtggccaaacaggaaaagaagaag 413
>dbj|AP003740.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1118_B03 Length = 108992 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 cccaccgccgccgtcgacat 99 |||||||||||||||||||| Sbjct: 52253 cccaccgccgccgtcgacat 52234
>dbj|D26610.1|MUSMNSFB Mus musculus MNSF-beta mRNA for monoclonal nonspecific suppressor factor beta, complete cds Length = 506 Score = 40.1 bits (20), Expect = 7.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 146 cagacgcccaaggtggcgaagcaggacaagaagaag 181 ||||| ||||||||||| || ||||| ||||||||| Sbjct: 324 cagactcccaaggtggccaaacaggaaaagaagaag 359
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 ccccaactcctccgagaagt 284 |||||||||||||||||||| Sbjct: 891261 ccccaactcctccgagaagt 891242
>ref|XM_842693.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0763) partial mRNA Length = 1434 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 tcgtcaccgccgtcgtcggc 247 |||||||||||||||||||| Sbjct: 137 tcgtcaccgccgtcgtcggc 118
>gb|AF033814.1|AF033814 Murine osteosarcoma virus, complete genome Length = 3811 Score = 40.1 bits (20), Expect = 7.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 146 cagacgcccaaggtggcgaagcaggacaagaagaag 181 ||||| ||||||||||| || ||||| ||||||||| Sbjct: 2442 cagactcccaaggtggccaaacaggaaaagaagaag 2407
>emb|AL845274.17| Mouse DNA sequence from clone RP23-146F24 on chromosome 2, complete sequence Length = 230151 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 gctggtttcctctctcgttt 340 |||||||||||||||||||| Sbjct: 77480 gctggtttcctctctcgttt 77499
>gb|AC145744.3| Mus musculus BAC clone RP24-142P6 from 16, complete sequence Length = 207240 Score = 40.1 bits (20), Expect = 7.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 146 cagacgcccaaggtggcgaagcaggacaagaagaag 181 ||||| ||||||||||| || ||||| ||||||||| Sbjct: 190 cagactcccaaggtggccaaacaggaaaagaagaag 225
>gb|AF029365.1|AF029365 Rhodobacter capsulatus B10 nuo gene cluster, NADH-CoQ reductase subunits NUOA (nuoA), NUOB (nuoB), NUOC (nuoC), NUOD (nuoD), NUOE (nuoE), NUOF (nuoF), NUOG (nuoG), NUOH (nuoH), NUOI (nuoI), NUOJ (nuoJ), NUOK (nuoK), NUOL (nuoL), NUOM (nuoM), and NUON (nuoN) genes, and BIRA (birA) gene, complete cds Length = 19614 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 caccgccgccgtcgacatgg 101 |||||||||||||||||||| Sbjct: 747 caccgccgccgtcgacatgg 766
>emb|BX005289.15| Zebrafish DNA sequence from clone DKEY-68I6 in linkage group 18, complete sequence Length = 155905 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 ttgttaaagtatgcatcttt 396 |||||||||||||||||||| Sbjct: 107694 ttgttaaagtatgcatcttt 107675 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 64,484,637 Number of extensions: 3594367 Number of successful extensions: 267215 Number of sequences better than 10.0: 151 Number of HSP's gapped: 267187 Number of HSP's successfully gapped: 178 Length of query: 498 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 476 Effective length of database: 18,508,616,841 Effective search space: 8810101616316 Effective search space used: 8810101616316 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 13 (26.3 bits)