ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf32n20 |
|---|---|
| Clone Library Name | barley_pub |
>P46736:BRCC3_HUMAN BRCA1/BRCA2-containing complex subunit 3 - Homo sapiens (Human)| Length = 316 Score = 114 bits (284), Expect(2) = 5e-31 Identities = 59/138 (42%), Positives = 80/138 (57%), Gaps = 20/138 (14%) Frame = +2 Query: 140 VRLGEEVWLTCLSHALTTETEEVMGLLLGDVESSSRGGSTAVIWGA-------------- 277 V L + +L CL+HAL+TE EEVMGL +G++ +R S G Sbjct: 12 VHLESDAFLVCLNHALSTEKEEVMGLCIGELNDDTRSDSKFAYTGTEMRTVAEKVDAVRI 71 Query: 278 ------LPQMRCERKKDRVEVNPALLADASKEAEKMTATIGKTTRVIGWYHSHPHITVLP 439 + R +++KDRVE++P L+ AS EAE++ G+ RV+GWYHSHPHITV P Sbjct: 72 VHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPHITVWP 131 Query: 440 SHVDVRTQAMFSVARSRF 493 SHVDVRTQAM+ + F Sbjct: 132 SHVDVRTQAMYQMMDQGF 149 Score = 42.7 bits (99), Expect(2) = 5e-31 Identities = 19/42 (45%), Positives = 28/42 (66%), Gaps = 1/42 (2%) Frame = +3 Query: 471 FQLLDPGFVGLIFSCFSEDAQ-KVGKIQVIAFQSLDGTHNTQ 593 +Q++D GFVGLIFSCF ED K G++ FQS+ +++ Sbjct: 142 YQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSE 183 Score = 43.1 bits (100), Expect = 0.004 Identities = 26/93 (27%), Positives = 45/93 (48%) Frame = +3 Query: 930 YRRKEVPLKVFPTRHLLKLDTTLSSYCGMQHVLFKEEQSAYNQAMLQNICDGKMHPLTSM 1109 Y R E+P+ + P H+ L S + +L +EEQ AY + D +T + Sbjct: 209 YERIEIPIHIVP--HVTIGKVCLESAVELPKILCQEEQDAYRRIHSLTHLDS----VTKI 262 Query: 1110 HHTSTYNASLCKLMEYCLSPAIGVLQDRVKENE 1208 H+ S + +LC M P + L+DR+++N+ Sbjct: 263 HNGSVFTKNLCSQMSAVSGPLLQWLEDRLEQNQ 295
>P46737:BRCC3_MOUSE BRCA1/BRCA2-containing complex subunit 3 - Mus musculus (Mouse)| Length = 291 Score = 112 bits (281), Expect(2) = 5e-31 Identities = 59/138 (42%), Positives = 79/138 (57%), Gaps = 20/138 (14%) Frame = +2 Query: 140 VRLGEEVWLTCLSHALTTETEEVMGLLLGDVESSSRGGSTAVIWGA-------------- 277 V L + +L CL+HAL+TE EEVMGL +G++ R S G Sbjct: 12 VHLESDAFLVCLNHALSTEKEEVMGLCIGELNDDIRSDSKFTYTGTEMRTVQEKMDTIRI 71 Query: 278 ------LPQMRCERKKDRVEVNPALLADASKEAEKMTATIGKTTRVIGWYHSHPHITVLP 439 + R +++KDRVE++P L+ AS EAE++ G+ RV+GWYHSHPHITV P Sbjct: 72 VHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPHITVWP 131 Query: 440 SHVDVRTQAMFSVARSRF 493 SHVDVRTQAM+ + F Sbjct: 132 SHVDVRTQAMYQMMDQGF 149 Score = 43.9 bits (102), Expect(2) = 5e-31 Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 3/58 (5%) Frame = +3 Query: 471 FQLLDPGFVGLIFSCFSEDAQ-KVGKIQVIAFQSLDGTHNT--QRAIVPVITNPVIDL 635 +Q++D GFVGLIFSCF ED K G++ FQS+ ++ +R +P+ P I + Sbjct: 142 YQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSEYERIEIPIHIVPHITI 199 Score = 45.8 bits (107), Expect = 6e-04 Identities = 27/95 (28%), Positives = 47/95 (49%) Frame = +3 Query: 924 AEYRRKEVPLKVFPTRHLLKLDTTLSSYCGMQHVLFKEEQSAYNQAMLQNICDGKMHPLT 1103 +EY R E+P+ + P H+ L S + +L +EEQ AY + D +T Sbjct: 182 SEYERIEIPIHIVP--HITIGKVCLESAVELPKILCQEEQDAYRRIHSLTHLDS----VT 235 Query: 1104 SMHHTSTYNASLCKLMEYCLSPAIGVLQDRVKENE 1208 +H+ S + +LC M P + L+DR+++N+ Sbjct: 236 KIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLEQNQ 270
>P41883:YPT5_CAEEL Uncharacterized protein F37A4.5 - Caenorhabditis elegans| Length = 319 Score = 49.3 bits (116), Expect = 5e-05 Identities = 38/117 (32%), Positives = 50/117 (42%) Frame = +2 Query: 140 VRLGEEVWLTCLSHALTTETEEVMGLLLGDVESSSRGGSTAVIWGALPQMRCERKKDRVE 319 V + L L HA + EVMGL+LGD T V A+PQ + V+ Sbjct: 29 VNISSLALLKMLRHARSGIPLEVMGLMLGDFVDDYTINVTDVF--AMPQSGTSVTVESVD 86 Query: 320 VNPALLADASKEAEKMTATIGKTTRVIGWYHSHPHITVLPSHVDVRTQAMFSVARSR 490 +K + + +G+T V+GWYHSHP S VDV TQ F R Sbjct: 87 P-----VYQTKHMD-LLKLVGRTENVVGWYHSHPGFGCWLSSVDVNTQQSFEALHPR 137
>Q750E9:RPN11_ASHGO 26S proteasome regulatory subunit RPN11 - Ashbya gossypii (Yeast)| (Eremothecium gossypii) Length = 311 Score = 48.1 bits (113), Expect = 1e-04 Identities = 42/133 (31%), Positives = 54/133 (40%), Gaps = 5/133 (3%) Frame = +2 Query: 107 GGRPAEMSLTEVR----LGEEVWLTCLSHALTTETEEVMGLLLGDVESSSRGGSTAVIWG 274 G EM L + + + L L H+ EVMGL+LGD V Sbjct: 17 GAAATEMPLDDTKETVYISSLALLKMLKHSRAGVPMEVMGLMLGDFVDEYTVNVVDVF-- 74 Query: 275 ALPQMRCERKKDRVE-VNPALLADASKEAEKMTATIGKTTRVIGWYHSHPHITVLPSHVD 451 A+PQ + V+ V A + D K+ G+ V+GWYHSHP S VD Sbjct: 75 AMPQSGTGVSVEAVDDVFQAKMMDMLKQT-------GRDQMVVGWYHSHPGFGCWLSSVD 127 Query: 452 VRTQAMFSVARSR 490 V TQ F SR Sbjct: 128 VDTQRSFEQLNSR 140
>Q9XZ58:CSN5_DROME COP9 signalosome complex subunit 5 - Drosophila melanogaster (Fruit| fly) Length = 327 Score = 47.4 bits (111), Expect = 2e-04 Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 4/115 (3%) Frame = +2 Query: 137 EVRLGEEVWLTCLSHALTTETEEVMGLLLGDVESSSRGGSTAVIWGALP----QMRCERK 304 ++++ L + HA + T EVMGL+LG VE ++ A ALP + R + Sbjct: 51 DIKISALALLKMVMHARSGGTLEVMGLMLGKVEDNTMIVMDAF---ALPVEGTETRVNAQ 107 Query: 305 KDRVEVNPALLADASKEAEKMTATIGKTTRVIGWYHSHPHITVLPSHVDVRTQAM 469 E A + +A+KE +G+ +GWYHSHP S +DV TQ + Sbjct: 108 AQAYEYMTAYM-EAAKE-------VGRMEHAVGWYHSHPGYGCWLSGIDVSTQML 154
>P43588:RPN11_YEAST 26S proteasome regulatory subunit RPN11 - Saccharomyces cerevisiae| (Baker's yeast) Length = 306 Score = 46.2 bits (108), Expect = 4e-04 Identities = 37/110 (33%), Positives = 46/110 (41%), Gaps = 1/110 (0%) Frame = +2 Query: 164 LTCLSHALTTETEEVMGLLLGDVESSSRGGSTAVIWGALPQMRCERKKDRVE-VNPALLA 340 L L H EVMGL+LG+ V A+PQ + V+ V A + Sbjct: 35 LKMLKHGRAGVPMEVMGLMLGEFVDDYTVNVVDVF--AMPQSGTGVSVEAVDDVFQAKMM 92 Query: 341 DASKEAEKMTATIGKTTRVIGWYHSHPHITVLPSHVDVRTQAMFSVARSR 490 D K+ G+ V+GWYHSHP S VDV TQ F SR Sbjct: 93 DMLKQT-------GRDQMVVGWYHSHPGFGCWLSSVDVNTQKSFEQLNSR 135
>O35593:PSDE_MOUSE 26S proteasome non-ATPase regulatory subunit 14 - Mus musculus| (Mouse) Length = 310 Score = 45.8 bits (107), Expect = 6e-04 Identities = 44/148 (29%), Positives = 58/148 (39%), Gaps = 1/148 (0%) Frame = +2 Query: 50 LLRHRALRPGPDPKPQPNGGGRPAEMSLTEVRLGEEVWLTCLSHALTTETEEVMGLLLGD 229 LLR PG P + PA + +V + L L H EVMGL+LG+ Sbjct: 4 LLRLGGGMPGLGQGPPTDA---PAVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGE 60 Query: 230 VESSSRGGSTAVIWGALPQMRCERKKDRVE-VNPALLADASKEAEKMTATIGKTTRVIGW 406 V A+PQ + V+ V A + D K+ G+ V+GW Sbjct: 61 FVDDYTVRVIDVF--AMPQSGTGVSVEAVDPVFQAKMLDMLKQT-------GRPEMVVGW 111 Query: 407 YHSHPHITVLPSHVDVRTQAMFSVARSR 490 YHSHP S VD+ TQ F R Sbjct: 112 YHSHPGFGCWLSGVDINTQQSFEALSER 139
>O00487:PSDE_HUMAN 26S proteasome non-ATPase regulatory subunit 14 - Homo sapiens| (Human) Length = 310 Score = 45.8 bits (107), Expect = 6e-04 Identities = 44/148 (29%), Positives = 58/148 (39%), Gaps = 1/148 (0%) Frame = +2 Query: 50 LLRHRALRPGPDPKPQPNGGGRPAEMSLTEVRLGEEVWLTCLSHALTTETEEVMGLLLGD 229 LLR PG P + PA + +V + L L H EVMGL+LG+ Sbjct: 4 LLRLGGGMPGLGQGPPTDA---PAVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGE 60 Query: 230 VESSSRGGSTAVIWGALPQMRCERKKDRVE-VNPALLADASKEAEKMTATIGKTTRVIGW 406 V A+PQ + V+ V A + D K+ G+ V+GW Sbjct: 61 FVDDYTVRVIDVF--AMPQSGTGVSVEAVDPVFQAKMLDMLKQT-------GRPEMVVGW 111 Query: 407 YHSHPHITVLPSHVDVRTQAMFSVARSR 490 YHSHP S VD+ TQ F R Sbjct: 112 YHSHPGFGCWLSGVDINTQQSFEALSER 139
>Q6P635:CSN5_XENTR COP9 signalosome complex subunit 5 - Xenopus tropicalis (Western| clawed frog) (Silurana tropicalis) Length = 334 Score = 45.4 bits (106), Expect = 7e-04 Identities = 33/102 (32%), Positives = 46/102 (45%) Frame = +2 Query: 164 LTCLSHALTTETEEVMGLLLGDVESSSRGGSTAVIWGALPQMRCERKKDRVEVNPALLAD 343 L + HA + EVMGL+LG V+ G T +I + + E + RV A Sbjct: 63 LKMVMHARSGGNLEVMGLMLGKVD-----GETMIIMDSFA-LPVEGTETRVNAQAAAYEY 116 Query: 344 ASKEAEKMTATIGKTTRVIGWYHSHPHITVLPSHVDVRTQAM 469 + E +G+ IGWYHSHP S +DV TQ + Sbjct: 117 MAAYIEN-AKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQML 157
>Q6GLM9:CSN5_XENLA COP9 signalosome complex subunit 5 - Xenopus laevis (African clawed| frog) Length = 332 Score = 45.4 bits (106), Expect = 7e-04 Identities = 33/102 (32%), Positives = 46/102 (45%) Frame = +2 Query: 164 LTCLSHALTTETEEVMGLLLGDVESSSRGGSTAVIWGALPQMRCERKKDRVEVNPALLAD 343 L + HA + EVMGL+LG V+ G T +I + + E + RV A Sbjct: 61 LKMVMHARSGGNLEVMGLMLGKVD-----GETMIIMDSFA-LPVEGTETRVNAQAAAYEY 114 Query: 344 ASKEAEKMTATIGKTTRVIGWYHSHPHITVLPSHVDVRTQAM 469 + E +G+ IGWYHSHP S +DV TQ + Sbjct: 115 MAAYIEN-AKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQML 155
>O35864:CSN5_MOUSE COP9 signalosome complex subunit 5 - Mus musculus (Mouse)| Length = 334 Score = 45.4 bits (106), Expect = 7e-04 Identities = 33/102 (32%), Positives = 46/102 (45%) Frame = +2 Query: 164 LTCLSHALTTETEEVMGLLLGDVESSSRGGSTAVIWGALPQMRCERKKDRVEVNPALLAD 343 L + HA + EVMGL+LG V+ G T +I + + E + RV A Sbjct: 63 LKMVMHARSGGNLEVMGLMLGKVD-----GETMIIMDSFA-LPVEGTETRVNAQAAAYEY 116 Query: 344 ASKEAEKMTATIGKTTRVIGWYHSHPHITVLPSHVDVRTQAM 469 + E +G+ IGWYHSHP S +DV TQ + Sbjct: 117 MAAYIEN-AKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQML 157
>Q92905:CSN5_HUMAN COP9 signalosome complex subunit 5 - Homo sapiens (Human)| Length = 334 Score = 45.4 bits (106), Expect = 7e-04 Identities = 33/102 (32%), Positives = 46/102 (45%) Frame = +2 Query: 164 LTCLSHALTTETEEVMGLLLGDVESSSRGGSTAVIWGALPQMRCERKKDRVEVNPALLAD 343 L + HA + EVMGL+LG V+ G T +I + + E + RV A Sbjct: 63 LKMVMHARSGGNLEVMGLMLGKVD-----GETMIIMDSFA-LPVEGTETRVNAQAAAYEY 116 Query: 344 ASKEAEKMTATIGKTTRVIGWYHSHPHITVLPSHVDVRTQAM 469 + E +G+ IGWYHSHP S +DV TQ + Sbjct: 117 MAAYIEN-AKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQML 157
>Q6PC30:CSN5_DANRE COP9 signalosome complex subunit 5 - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 334 Score = 45.4 bits (106), Expect = 7e-04 Identities = 33/102 (32%), Positives = 46/102 (45%) Frame = +2 Query: 164 LTCLSHALTTETEEVMGLLLGDVESSSRGGSTAVIWGALPQMRCERKKDRVEVNPALLAD 343 L + HA + EVMGL+LG V+ G T +I + + E + RV A Sbjct: 61 LKMVMHARSGGNLEVMGLMLGKVD-----GETMIIMDSFA-LPVEGTETRVNAQAAAYEY 114 Query: 344 ASKEAEKMTATIGKTTRVIGWYHSHPHITVLPSHVDVRTQAM 469 + E +G+ IGWYHSHP S +DV TQ + Sbjct: 115 MAAYIEN-AKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQML 155
>Q6FKS1:RPN11_CANGA 26S proteasome regulatory subunit RPN11 - Candida glabrata (Yeast)| (Torulopsis glabrata) Length = 306 Score = 45.1 bits (105), Expect = 0.001 Identities = 36/110 (32%), Positives = 46/110 (41%), Gaps = 1/110 (0%) Frame = +2 Query: 164 LTCLSHALTTETEEVMGLLLGDVESSSRGGSTAVIWGALPQMRCERKKDRVE-VNPALLA 340 L L H EVMGL+LG+ V A+PQ + V+ V A + Sbjct: 35 LKMLKHGRAGVPMEVMGLMLGEFVDEYTVNVVDVF--AMPQSGTGVSVEAVDDVFQARMM 92 Query: 341 DASKEAEKMTATIGKTTRVIGWYHSHPHITVLPSHVDVRTQAMFSVARSR 490 D K+ G+ V+GWYHSHP S VDV TQ F +R Sbjct: 93 DMLKQT-------GRDQMVVGWYHSHPGFGCWLSSVDVNTQKSFEQLNNR 135
>Q9V3H2:PSDE_DROME 26S proteasome non-ATPase regulatory subunit 14 - Drosophila| melanogaster (Fruit fly) Length = 308 Score = 43.9 bits (102), Expect = 0.002 Identities = 37/126 (29%), Positives = 50/126 (39%), Gaps = 1/126 (0%) Frame = +2 Query: 116 PAEMSLTEVRLGEEVWLTCLSHALTTETEEVMGLLLGDVESSSRGGSTAVIWGALPQMRC 295 P + +V + L L H EVMGL+LG+ V A+PQ Sbjct: 21 PVVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVQVIDVF--AMPQTGT 78 Query: 296 ERKKDRVE-VNPALLADASKEAEKMTATIGKTTRVIGWYHSHPHITVLPSHVDVRTQAMF 472 + V+ V A + D K+ G+ V+GWYHSHP S VD+ TQ F Sbjct: 79 GVSVEAVDPVFQAKMLDMLKQT-------GRPEMVVGWYHSHPGFGCWLSGVDINTQQSF 131 Query: 473 SVARSR 490 R Sbjct: 132 EALSER 137
>O76577:PSDE_CAEEL 26S proteasome non-ATPase regulatory subunit 14 - Caenorhabditis| elegans Length = 312 Score = 43.9 bits (102), Expect = 0.002 Identities = 35/110 (31%), Positives = 45/110 (40%), Gaps = 1/110 (0%) Frame = +2 Query: 164 LTCLSHALTTETEEVMGLLLGDVESSSRGGSTAVIWGALPQMRCERKKDRVE-VNPALLA 340 L L H EVMGL+LG+ V A+PQ + V+ V A + Sbjct: 41 LKMLKHGRAGVPMEVMGLMLGEFVDDYTVNVIDVF--AMPQSGTGVSVEAVDPVFQAKML 98 Query: 341 DASKEAEKMTATIGKTTRVIGWYHSHPHITVLPSHVDVRTQAMFSVARSR 490 D K+ G+ V+GWYHSHP S VD+ TQ F R Sbjct: 99 DMLKQT-------GRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSDR 141
>Q7RXX8:CSN5_NEUCR COP9 signalosome complex subunit 5 - Neurospora crassa| Length = 336 Score = 43.9 bits (102), Expect = 0.002 Identities = 34/110 (30%), Positives = 51/110 (46%) Frame = +2 Query: 140 VRLGEEVWLTCLSHALTTETEEVMGLLLGDVESSSRGGSTAVIWGALPQMRCERKKDRVE 319 VR+ + + HA + EVMG++ G +E GST VI A ++ E + RV Sbjct: 44 VRISSVAMIKMVMHARSGGNLEVMGMMQGYIE-----GSTMVITDAY-RLPVEGTETRVN 97 Query: 320 VNPALLADASKEAEKMTATIGKTTRVIGWYHSHPHITVLPSHVDVRTQAM 469 + E ++ + VIGWYHSHP S +DV TQ++ Sbjct: 98 AQDEA-NEYMVEYLRLCREENRLENVIGWYHSHPGYGCWLSGIDVGTQSL 146
>Q8LAZ7:CSN5B_ARATH COP9 signalosome complex subunit 5b - Arabidopsis thaliana| (Mouse-ear cress) Length = 357 Score = 43.9 bits (102), Expect = 0.002 Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 3/105 (2%) Frame = +2 Query: 164 LTCLSHALTTETEEVMGLLLGDVESSSRGGSTAVIWGALPQMRCERKKDRVEVNPALLAD 343 L + HA + T E+MGL+ G E G T ++ A + E + RV +D Sbjct: 67 LKMVVHARSGGTIEIMGLMQGKTE-----GDTIIVMDAFA-LPVEGTETRVNAQ----SD 116 Query: 344 ASK---EAEKMTATIGKTTRVIGWYHSHPHITVLPSHVDVRTQAM 469 A + E + + G+ V+GWYHSHP S +DV TQ + Sbjct: 117 AYEYMVEYSQTSKLAGRLENVVGWYHSHPGYGCWLSGIDVSTQML 161
>Q4P804:CSN5_USTMA COP9 signalosome complex subunit 5 - Ustilago maydis (Smut fungus)| Length = 406 Score = 43.5 bits (101), Expect = 0.003 Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 6/115 (5%) Frame = +2 Query: 137 EVRLGEEVWLTCLSHALTTETEEVMGLLLGDVESSSRGGSTAVIWG--ALP----QMRCE 298 +VR+ + + HA + E+MGL+ G ++ +R T + ALP + R Sbjct: 60 KVRISAVALIKMVMHARSGGIYEIMGLMQGKIDVENR---TLYVMDSFALPVEGTETRVN 116 Query: 299 RKKDRVEVNPALLADASKEAEKMTATIGKTTRVIGWYHSHPHITVLPSHVDVRTQ 463 + + E L D SKE +G+ V+GWYHSHP S +DV TQ Sbjct: 117 AQNEAYEYMVQYL-DHSKE-------VGRLENVVGWYHSHPGYGCWLSGIDVNTQ 163
>Q9FVU9:CSN5A_ARATH COP9 signalosome complex subunit 5a - Arabidopsis thaliana| (Mouse-ear cress) Length = 358 Score = 42.7 bits (99), Expect = 0.005 Identities = 31/110 (28%), Positives = 48/110 (43%) Frame = +2 Query: 140 VRLGEEVWLTCLSHALTTETEEVMGLLLGDVESSSRGGSTAVIWGALPQMRCERKKDRVE 319 V++ L + HA + T E+MGL+ G + G T ++ A + E + RV Sbjct: 59 VKISALALLKMVVHARSGGTIEIMGLMQGKTD-----GDTIIVMDAFA-LPVEGTETRVN 112 Query: 320 VNPALLADASKEAEKMTATIGKTTRVIGWYHSHPHITVLPSHVDVRTQAM 469 + E + G+ V+GWYHSHP S +DV TQ + Sbjct: 113 AQDDAY-EYMVEYSQTNKLAGRLENVVGWYHSHPGYGCWLSGIDVSTQRL 161
>Q9LT08:PSDE_ARATH 26S proteasome non-ATPase regulatory subunit 14 - Arabidopsis| thaliana (Mouse-ear cress) Length = 308 Score = 42.4 bits (98), Expect = 0.006 Identities = 35/119 (29%), Positives = 47/119 (39%), Gaps = 1/119 (0%) Frame = +2 Query: 137 EVRLGEEVWLTCLSHALTTETEEVMGLLLGDVESSSRGGSTAVIWGALPQMRCERKKDRV 316 +V + L L H EVMGL+LG+ V A+PQ + V Sbjct: 29 QVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVF--AMPQSGTGVSVEAV 86 Query: 317 E-VNPALLADASKEAEKMTATIGKTTRVIGWYHSHPHITVLPSHVDVRTQAMFSVARSR 490 + V + D K+ G+ V+GWYHSHP S VD+ TQ F R Sbjct: 87 DHVFQTNMLDMLKQT-------GRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQR 138
>P91001:CSN5_CAEEL COP9 signalosome complex subunit 5 - Caenorhabditis elegans| Length = 368 Score = 42.0 bits (97), Expect = 0.008 Identities = 33/111 (29%), Positives = 51/111 (45%) Frame = +2 Query: 137 EVRLGEEVWLTCLSHALTTETEEVMGLLLGDVESSSRGGSTAVIWGALPQMRCERKKDRV 316 ++++ L HA E+MGLL G ++++S + ALP E + RV Sbjct: 55 QIKISAIALLKMTMHAKRGGNLEIMGLLQGRIDANS---FIILDVFALP---VEGTETRV 108 Query: 317 EVNPALLADASKEAEKMTATIGKTTRVIGWYHSHPHITVLPSHVDVRTQAM 469 + +E M T G+ +V+GWYHSHP S +DV TQ + Sbjct: 109 NAQAQAYEYMTVYSE-MCDTEGRKEKVVGWYHSHPGYGCWLSGIDVSTQTL 158
>Q6FT36:CSN5_CANGA COP9 signalosome complex subunit 5 - Candida glabrata (Yeast)| (Torulopsis glabrata) Length = 465 Score = 41.6 bits (96), Expect = 0.011 Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 3/102 (2%) Frame = +2 Query: 173 LSHALTTETEEVMGLLLGDVESSSRGGSTAVIWGA--LPQMRCERKKD-RVEVNPALLAD 343 L HA EVMG+LLG+V G+T VI+ LP E + +E ++ Sbjct: 85 LCHATKGGNIEVMGMLLGNVI-----GNTFVIFDCFELPVEGTETMVNAHMESYEYMVQF 139 Query: 344 ASKEAEKMTATIGKTTRVIGWYHSHPHITVLPSHVDVRTQAM 469 + E+ + +IGWYHSHP S++D++TQ++ Sbjct: 140 YHEMVERSYTRNEENLNIIGWYHSHPGYDCWLSNIDMQTQSL 181
>P41878:RPN11_SCHPO 26S proteasome regulatory subunit rpn11 - Schizosaccharomyces pombe| (Fission yeast) Length = 308 Score = 41.2 bits (95), Expect = 0.014 Identities = 33/103 (32%), Positives = 41/103 (39%) Frame = +2 Query: 164 LTCLSHALTTETEEVMGLLLGDVESSSRGGSTAVIWGALPQMRCERKKDRVEVNPALLAD 343 L L H EVMGL+LG+ V A+PQ + V+ P Sbjct: 38 LKMLRHGRHGTPMEVMGLMLGEFVDDFTVRVVDVF--AMPQSGTGVSVEAVD--PVF--- 90 Query: 344 ASKEAEKMTATIGKTTRVIGWYHSHPHITVLPSHVDVRTQAMF 472 K M G+ V+GWYHSHP S VD+ TQ F Sbjct: 91 -QKNMMDMLKQTGRPEMVVGWYHSHPGFGCWLSSVDINTQQSF 132
>Q6CRJ8:CSN5_KLULA COP9 signalosome complex subunit 5 - Kluyveromyces lactis (Yeast)| (Candida sphaerica) Length = 373 Score = 41.2 bits (95), Expect = 0.014 Identities = 25/99 (25%), Positives = 48/99 (48%) Frame = +2 Query: 173 LSHALTTETEEVMGLLLGDVESSSRGGSTAVIWGALPQMRCERKKDRVEVNPALLADASK 352 LSHA+ EVMG+L+G + ++ + + + RV + + Sbjct: 77 LSHAVDGGDIEVMGMLVGYTSNDM------IVVKDCYSLPVQGTETRVNAH---MESYEY 127 Query: 353 EAEKMTATIGKTTRVIGWYHSHPHITVLPSHVDVRTQAM 469 + + A + K +++GWYHSHP S++D++TQ++ Sbjct: 128 MVQYLDAFVTKEDKIVGWYHSHPGYGCWLSNIDIQTQSL 166
>Q4IJM4:CSN5_GIBZE COP9 signalosome complex subunit 5 - Gibberella zeae (Fusarium| graminearum) Length = 340 Score = 41.2 bits (95), Expect = 0.014 Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 4/114 (3%) Frame = +2 Query: 140 VRLGEEVWLTCLSHALTTETEEVMGLLLGDVESSSRGGSTAVIWGALPQMRCERKKDRV- 316 VR+ + HA + EVMGL+ G + G T ++ A ++ E + RV Sbjct: 52 VRISATALIKMTMHARSGGNLEVMGLMQGYTQ-----GDTFIVTDAF-RLPVEGTETRVN 105 Query: 317 ---EVNPALLADASKEAEKMTATIGKTTRVIGWYHSHPHITVLPSHVDVRTQAM 469 E N ++ E + G+ V+GWYHSHP S +DV T+AM Sbjct: 106 AQDEANEYIV-----EYLDLCRAQGRQENVVGWYHSHPGYGCWLSGIDVDTEAM 154
>O94454:CSN5_SCHPO COP9 signalosome complex subunit 5 - Schizosaccharomyces pombe| (Fission yeast) Length = 299 Score = 40.4 bits (93), Expect = 0.024 Identities = 32/108 (29%), Positives = 49/108 (45%) Frame = +2 Query: 140 VRLGEEVWLTCLSHALTTETEEVMGLLLGDVESSSRGGSTAVIWGALPQMRCERKKDRVE 319 V++ L L H EVMG + G VE G++ +I + + E + RV Sbjct: 35 VKISAVALLKMLRHVSQGMPLEVMGYVQGKVE-----GASLIILDSFA-LPVEGTETRVN 88 Query: 320 VNPALLADASKEAEKMTATIGKTTRVIGWYHSHPHITVLPSHVDVRTQ 463 + + S + + ++ + VIGWYHSHP+ S VDV TQ Sbjct: 89 AHEEA-QEYSVQYHTLCKSVYRHENVIGWYHSHPNYGCWLSGVDVETQ 135
>Q75E19:CSN5_ASHGO COP9 signalosome complex subunit 5 - Ashbya gossypii (Yeast)| (Eremothecium gossypii) Length = 420 Score = 39.3 bits (90), Expect = 0.053 Identities = 42/179 (23%), Positives = 67/179 (37%), Gaps = 24/179 (13%) Frame = +2 Query: 5 PTPTRPRAGATQHNTLLRHRALRPGPDPKPQPNGGGRPAEMSLT-------EVRLGEEVW 163 P+ R Q LL HR G G +P + L+ +VR+ +E+W Sbjct: 4 PSAALHRHTVGQLRKLLLHREGSAGCGRLQPALDGSQPLDSPLSTVPSSRSQVRVQQELW 63 Query: 164 --------------LTC---LSHALTTETEEVMGLLLGDVESSSRGGSTAVIWGALPQMR 292 L C L HA EV+G+LLG V+ ++ ++ Sbjct: 64 KQDPTYFQKAALSALACMKILRHAFDGGDMEVLGMLLGYVQDEM------IVVVDSYRLP 117 Query: 293 CERKKDRVEVNPALLADASKEAEKMTATIGKTTRVIGWYHSHPHITVLPSHVDVRTQAM 469 E + RV A + + + + + ++GWYHSHP S +D TQ + Sbjct: 118 VEGTETRVN---AQMESYEYTVQYLETAVPEGLAIVGWYHSHPGYGCWLSGIDAETQTL 173
>Q59PG6:CSN5_CANAL COP9 signalosome complex subunit 5 - Candida albicans (Yeast)| Length = 213 Score = 38.5 bits (88), Expect = 0.090 Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 2/100 (2%) Frame = +2 Query: 176 SHALTTETEEVMGLLLGDVESSSRGGSTAVIWGALPQMRCERKKDRVEV-NPALLADASK 352 +HA T + E+MG+L+G + S +I ++ E + RV N A Sbjct: 87 THAQTGGSIEIMGMLVGKISGHS------IIVMDTYRLPVEGTETRVNAQNEAYTYMVEY 140 Query: 353 EAEKMTATIGKTTR-VIGWYHSHPHITVLPSHVDVRTQAM 469 E+ + GK ++GWYH HP +DV TQ++ Sbjct: 141 LTERQQLSNGKNEENIVGWYHRHPRYGCWLKGIDVSTQSL 180
>Q5BBF1:CSN5_EMENI COP9 signalosome complex subunit 5 - Emericella nidulans| (Aspergillus nidulans) Length = 335 Score = 38.1 bits (87), Expect = 0.12 Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 6/116 (5%) Frame = +2 Query: 140 VRLGEEVWLTCLSHALTTETEEVMGLLLGDVESSSRGGSTAVIWGALPQMRCERKKDRV- 316 VR+ L + HA + + EVMGL+ G + + T V+ A ++ E + RV Sbjct: 51 VRISAVALLKMVMHARSGGSLEVMGLMQGYILPN-----TFVVTDAF-RLPVEGTETRVN 104 Query: 317 ---EVNPALLA--DASKEAEKMTATIGKTTRVIGWYHSHPHITVLPSHVDVRTQAM 469 E N +++ + +EA G+ +GWYHSHP S +DV TQ M Sbjct: 105 AQDEANEYMVSYLQSCREA-------GRMENAVGWYHSHPGYGCWLSGIDVSTQDM 153
>Q6BMQ3:CSN5_DEBHA COP9 signalosome complex subunit 5 - Debaryomyces hansenii (Yeast)| (Torulaspora hansenii) Length = 469 Score = 38.1 bits (87), Expect = 0.12 Identities = 26/97 (26%), Positives = 44/97 (45%) Frame = +2 Query: 179 HALTTETEEVMGLLLGDVESSSRGGSTAVIWGALPQMRCERKKDRVEVNPALLADASKEA 358 HA + EVMG++ G + +S ++ P + E + RV + Sbjct: 76 HAKSGGAIEVMGMMTGKIIKNS-----IIVMDVYP-LPVEGTETRVNAQAEGYEYMVQYL 129 Query: 359 EKMTATIGKTTRVIGWYHSHPHITVLPSHVDVRTQAM 469 E + +G+ ++GWYHSHP S +DV TQ++ Sbjct: 130 ENLKQ-VGRDENIVGWYHSHPGYGCWLSGIDVATQSL 165
>Q08723:RPN8_YEAST 26S proteasome regulatory subunit RPN8 - Saccharomyces cerevisiae| (Baker's yeast) Length = 338 Score = 37.0 bits (84), Expect = 0.26 Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 3/100 (3%) Frame = +2 Query: 137 EVRLGEEVWLTCLSHALTTETEE---VMGLLLGDVESSSRGGSTAVIWGALPQMRCERKK 307 +V + V L+ L H T+T+E +G++LGD SS+ + + ALP E+ Sbjct: 7 KVTIAPLVLLSALDHYERTQTKENKRCVGVILGDANSSTIRVTNSF---ALPFEEDEKNS 63 Query: 308 DRVEVNPALLADASKEAEKMTATIGKTTRVIGWYHSHPHI 427 D ++ + + ++ +K+ A ++IGWYHS P + Sbjct: 64 DVWFLDHNYIENMNEMCKKINAK----EKLIGWYHSGPKL 99
>Q8N594:MPND_HUMAN MPN domain-containing protein - Homo sapiens (Human)| Length = 471 Score = 36.2 bits (82), Expect = 0.45 Identities = 13/23 (56%), Positives = 16/23 (69%) Frame = +2 Query: 395 VIGWYHSHPHITVLPSHVDVRTQ 463 ++GWYHSHPH LPS D+ Q Sbjct: 344 LVGWYHSHPHSPALPSLQDIDAQ 366
>Q6C703:CSN5_YARLI COP9 signalosome complex subunit 5 - Yarrowia lipolytica (Candida| lipolytica) Length = 354 Score = 36.2 bits (82), Expect = 0.45 Identities = 27/95 (28%), Positives = 43/95 (45%) Frame = +2 Query: 179 HALTTETEEVMGLLLGDVESSSRGGSTAVIWGALPQMRCERKKDRVEVNPALLADASKEA 358 HA + EVMG++ G + + T V+ P + E + RV + + E Sbjct: 69 HARSGGAIEVMGMMTGKILPN-----TFVVMDCYP-LPVEGTETRVNAQQEGI-EFMVEY 121 Query: 359 EKMTATIGKTTRVIGWYHSHPHITVLPSHVDVRTQ 463 + +G+ ++GWYHSHP S +DV TQ Sbjct: 122 LQGLKDVGRRENIVGWYHSHPGYGCWLSGIDVDTQ 156
>Q5KAB0:CSN5_CRYNE COP9 signalosome complex subunit 5 - Cryptococcus neoformans| (Filobasidiella neoformans) Length = 371 Score = 36.2 bits (82), Expect = 0.45 Identities = 30/108 (27%), Positives = 47/108 (43%) Frame = +2 Query: 140 VRLGEEVWLTCLSHALTTETEEVMGLLLGDVESSSRGGSTAVIWGALPQMRCERKKDRVE 319 V++ + ++HA + E+MG++ G V G + ALP E + + Sbjct: 51 VKISAVALIKMVTHARSGGIYEIMGIMYGKVRD---GTFWIMDVAALPVQGTETRVNAG- 106 Query: 320 VNPALLADASKEAEKMTATIGKTTRVIGWYHSHPHITVLPSHVDVRTQ 463 N A+ + + A GK + GWYHSHP S +DV TQ Sbjct: 107 -NEAM--EYMVNFQTANAEAGKGELLRGWYHSHPGYGCWLSGIDVNTQ 151
>Q69Z66:MYSM1_MOUSE Protein MYSM1 - Mus musculus (Mouse)| Length = 819 Score = 35.8 bits (81), Expect = 0.58 Identities = 17/32 (53%), Positives = 19/32 (59%) Frame = +2 Query: 395 VIGWYHSHPHITVLPSHVDVRTQAMFSVARSR 490 VIGWYHSHP PS D+ TQA + SR Sbjct: 642 VIGWYHSHPAFDPNPSLRDIDTQAKYQSYFSR 673
>Q5VVJ2:MYSM1_HUMAN Protein MYSM1 - Homo sapiens (Human)| Length = 828 Score = 35.8 bits (81), Expect = 0.58 Identities = 17/32 (53%), Positives = 19/32 (59%) Frame = +2 Query: 395 VIGWYHSHPHITVLPSHVDVRTQAMFSVARSR 490 VIGWYHSHP PS D+ TQA + SR Sbjct: 651 VIGWYHSHPAFDPNPSLRDIDTQAKYQSYFSR 682
>Q5F3F2:MYSM1_CHICK Protein MYSM1 - Gallus gallus (Chicken)| Length = 832 Score = 35.8 bits (81), Expect = 0.58 Identities = 17/32 (53%), Positives = 19/32 (59%) Frame = +2 Query: 395 VIGWYHSHPHITVLPSHVDVRTQAMFSVARSR 490 VIGWYHSHP PS D+ TQA + SR Sbjct: 653 VIGWYHSHPAFDPNPSIRDIDTQAKYQSYFSR 684
>Q4WZP2:CSN5_ASPFU COP9 signalosome complex subunit 5 - Aspergillus fumigatus| (Sartorya fumigata) Length = 334 Score = 35.8 bits (81), Expect = 0.58 Identities = 32/117 (27%), Positives = 50/117 (42%), Gaps = 7/117 (5%) Frame = +2 Query: 140 VRLGEEVWLTCLSHALTTETEEVMGLLLGDVESSSRGGSTAVIWGALPQMRCERKKDRVE 319 +R+ + HA + + EVMGL+ G + T V+ A ++ E + RV Sbjct: 51 IRISAVALIKMTMHARSGGSLEVMGLMQGYILPE-----TFVVTDAF-RLPVEGTETRV- 103 Query: 320 VNPALLADASKEAEKMTATI-------GKTTRVIGWYHSHPHITVLPSHVDVRTQAM 469 +A +EA + + G+ +GWYHSHP S +DV TQ M Sbjct: 104 -------NAQEEANEYMVSYLQSCRDAGRMENAVGWYHSHPGYGCWLSGIDVTTQDM 153
>P68329:VGLI_EHV1D Glycoprotein I precursor - Equine herpesvirus 1 (strain Kentucky D)| (EHV-1) (Equine abortion virus) Length = 424 Score = 30.4 bits (67), Expect(2) = 0.73 Identities = 19/53 (35%), Positives = 26/53 (49%) Frame = -2 Query: 388 RLPNSGRHFLGLLGRVGEQRGVDLDAVLLPLAPHLRQRAPYHRGGAAPAGGLD 230 R+P H LG G + E D +L+ + LR +P HR A+PA G D Sbjct: 256 RVPTLYLHLLGRTGNLPE------DVLLVEDSEFLRTTSPAHRPSASPADGDD 302 Score = 23.9 bits (50), Expect(2) = 0.73 Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 8/38 (21%) Frame = -3 Query: 477 TENIAWVRTSTWE---GRTVICG-----CEWYQPITRV 388 T + W T E TV+ G C W+QP TRV Sbjct: 220 TPSATWGTQLTTELPTNETVVIGQEALLCHWFQPSTRV 257
>Q6DLD8:VGLI_EHV1B Glycoprotein I precursor - Equine herpesvirus 1 (strain Ab4p)| (EHV-1) (Equine abortion virus) Length = 424 Score = 30.4 bits (67), Expect(2) = 0.73 Identities = 19/53 (35%), Positives = 26/53 (49%) Frame = -2 Query: 388 RLPNSGRHFLGLLGRVGEQRGVDLDAVLLPLAPHLRQRAPYHRGGAAPAGGLD 230 R+P H LG G + E D +L+ + LR +P HR A+PA G D Sbjct: 256 RVPTLYLHLLGRTGNLPE------DVLLVEDSEFLRTTSPAHRPSASPADGDD 302 Score = 23.9 bits (50), Expect(2) = 0.73 Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 8/38 (21%) Frame = -3 Query: 477 TENIAWVRTSTWE---GRTVICG-----CEWYQPITRV 388 T + W T E TV+ G C W+QP TRV Sbjct: 220 TPSATWGTQLTTELPTNETVVIGQEALLCHWFQPSTRV 257
>P68326:VGLI_EHV1A Glycoprotein I precursor - Equine herpesvirus 1 (strain AB1)| (EHV-1) (Equine abortion virus) Length = 424 Score = 30.4 bits (67), Expect(2) = 0.73 Identities = 19/53 (35%), Positives = 26/53 (49%) Frame = -2 Query: 388 RLPNSGRHFLGLLGRVGEQRGVDLDAVLLPLAPHLRQRAPYHRGGAAPAGGLD 230 R+P H LG G + E D +L+ + LR +P HR A+PA G D Sbjct: 256 RVPTLYLHLLGRTGNLPE------DVLLVEDSEFLRTTSPAHRPSASPADGDD 302 Score = 23.9 bits (50), Expect(2) = 0.73 Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 8/38 (21%) Frame = -3 Query: 477 TENIAWVRTSTWE---GRTVICG-----CEWYQPITRV 388 T + W T E TV+ G C W+QP TRV Sbjct: 220 TPSATWGTQLTTELPTNETVVIGQEALLCHWFQPSTRV 257
>Q3TV65:MPND_MOUSE MPN domain-containing protein - Mus musculus (Mouse)| Length = 467 Score = 35.4 bits (80), Expect = 0.76 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = +2 Query: 395 VIGWYHSHPHITVLPSHVDVRTQAMFSV 478 ++GWYHSHPH +PS D+ Q + + Sbjct: 310 LVGWYHSHPHSPAVPSLQDIDAQMEYQL 337
>Q2GKV0:Y396_ANAPZ Maf-like protein APH_0396 - Anaplasma phagocytophilum (strain HZ)| Length = 193 Score = 34.7 bits (78), Expect = 1.3 Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 3/81 (3%) Frame = +3 Query: 861 GSDLSPSIQEALHRSTMDISGAEYRRKEVPLKVF---PTRHLLKLDTTLSSYCGMQHVLF 1031 G +SP + E++H+ + AE +E LKVF P + +L DT +YCG + ++ Sbjct: 25 GEVISPDLDESVHKGELPRLYAERVAREKALKVFSSRPDKFVLGADTV--AYCG-RRIML 81 Query: 1032 KEEQSAYNQAMLQNICDGKMH 1094 K + A L+ I G+ H Sbjct: 82 KTDDEAQATEYLEMI-SGRRH 101
>Q12468:CSN5_YEAST COP9 signalosome complex subunit 5 - Saccharomyces cerevisiae| (Baker's yeast) Length = 455 Score = 33.5 bits (75), Expect = 2.9 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = +2 Query: 380 GKTTRVIGWYHSHPHITVLPSHVDVRTQ 463 G V+GW+HSHP S++D++TQ Sbjct: 169 GAKLNVVGWFHSHPGYDCWLSNIDIQTQ 196
>P0A191:LIVF_SALTY High-affinity branched-chain amino acid transport ATP-binding protein| livF - Salmonella typhimurium Length = 237 Score = 33.1 bits (74), Expect = 3.8 Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 7/80 (8%) Frame = -3 Query: 1608 GKRIWGDNTKQKGTTVGWLLPQKDRPGAETRWVYTFALQLHASR-QGTGLGSRKHQERPR 1432 G+R++ T ++ +G ++DR +WVY +LH R Q G S Q+ Sbjct: 88 GRRVFSRMTVEENLAMGGFFAERDRFQERIKWVYELFPRLHERRIQRAGTMSGGEQQMLA 147 Query: 1431 TGLSIMT------IKEPSSG 1390 G ++M+ + EPS G Sbjct: 148 IGRALMSQPRLLLLDEPSLG 167
>P0A192:LIVF_SALTI High-affinity branched-chain amino acid transport ATP-binding protein| livF - Salmonella typhi Length = 237 Score = 33.1 bits (74), Expect = 3.8 Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 7/80 (8%) Frame = -3 Query: 1608 GKRIWGDNTKQKGTTVGWLLPQKDRPGAETRWVYTFALQLHASR-QGTGLGSRKHQERPR 1432 G+R++ T ++ +G ++DR +WVY +LH R Q G S Q+ Sbjct: 88 GRRVFSRMTVEENLAMGGFFAERDRFQERIKWVYELFPRLHERRIQRAGTMSGGEQQMLA 147 Query: 1431 TGLSIMT------IKEPSSG 1390 G ++M+ + EPS G Sbjct: 148 IGRALMSQPRLLLLDEPSLG 167
>Q08CH3:MPND_DANRE MPN domain-containing protein - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 458 Score = 32.7 bits (73), Expect = 4.9 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = +2 Query: 395 VIGWYHSHPHITVLPSHVDVRTQ 463 ++GWYHSHP LPS D+ +Q Sbjct: 301 LVGWYHSHPRGPALPSLQDIDSQ 323
>Q9Z148:EHMT2_MOUSE Histone-lysine N-methyltransferase, H3 lysine-9 specific 3 - Mus| musculus (Mouse) Length = 1263 Score = 32.7 bits (73), Expect = 4.9 Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 4/46 (8%) Frame = +2 Query: 152 EEVWLTCLSHALTTETEEVMGLLLG----DVESSSRGGSTAVIWGA 277 EE TCL HA E++ LLL DV + GG T +IW A Sbjct: 801 EEDGSTCLHHAAKIGNLEMVSLLLSTGQVDVNAQDSGGWTPIIWAA 846
>Q96KQ7:EHMT2_HUMAN Histone-lysine N-methyltransferase, H3 lysine-9 specific 3 - Homo| sapiens (Human) Length = 1210 Score = 32.7 bits (73), Expect = 4.9 Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 4/46 (8%) Frame = +2 Query: 152 EEVWLTCLSHALTTETEEVMGLLLG----DVESSSRGGSTAVIWGA 277 EE TCL HA E++ LLL DV + GG T +IW A Sbjct: 748 EEDGSTCLHHAAKIGNLEMVSLLLSTGQVDVNAQDSGGWTPIIWAA 793
>Q99801:NKX31_HUMAN Homeobox protein Nkx-3.1 - Homo sapiens (Human)| Length = 234 Score = 32.3 bits (72), Expect = 6.4 Identities = 30/106 (28%), Positives = 42/106 (39%), Gaps = 11/106 (10%) Frame = +2 Query: 5 PTPTRP----------RAGAT-QHNTLLRHRALRPGPDPKPQPNGGGRPAEMSLTEVRLG 151 PTP++P R GA Q R P P+P+P+P GG A ++ G Sbjct: 20 PTPSKPLTSFLIQDILRDGAQRQGGRTSSQRQRDPEPEPEPEPEGGRSRAGAQNDQLSTG 79 Query: 152 EEVWLTCLSHALTTETEEVMGLLLGDVESSSRGGSTAVIWGALPQM 289 TE E +G L D E++S GALP++ Sbjct: 80 PRAAPEEAETLAETEPERHLGSYLLDSENTS---------GALPRL 116
>P14378:VGLC_BHV1C Glycoprotein GIII precursor - Bovine herpesvirus 1.1 (strain| Cooper) (BoHV-1) (Infectious bovine rhinotracheitis virus) Length = 521 Score = 32.0 bits (71), Expect = 8.4 Identities = 18/78 (23%), Positives = 34/78 (43%) Frame = +2 Query: 95 QPNGGGRPAEMSLTEVRLGEEVWLTCLSHALTTETEEVMGLLLGDVESSSRGGSTAVIWG 274 +P+GGGRP ++ E W+ C A+ E + + G ++++ G + + Sbjct: 117 RPSGGGRPRPPRPSKAPPKERKWMLCEREAVAASYAEPLYVHCGVADNATGGARLELWFQ 176 Query: 275 ALPQMRCERKKDRVEVNP 328 + + R R D NP Sbjct: 177 RVGRFRSTRGDDEAVRNP 194
>Q6FMD8:RPN8_CANGA 26S proteasome regulatory subunit RPN8 - Candida glabrata (Yeast)| (Torulopsis glabrata) Length = 329 Score = 32.0 bits (71), Expect = 8.4 Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 3/99 (3%) Frame = +2 Query: 140 VRLGEEVWLTCLSHALTTETEE---VMGLLLGDVESSSRGGSTAVIWGALPQMRCERKKD 310 V + V L+ L H T T E +G++LGD ++++ + + ALP E+ D Sbjct: 8 VTIAPLVLLSVLDHYERTNTPEGKRCVGVILGDSQTNTIRVTNSF---ALPFEEDEKNSD 64 Query: 311 RVEVNPALLADASKEAEKMTATIGKTTRVIGWYHSHPHI 427 ++ + ++ +K+ A ++IGWYHS P + Sbjct: 65 VWFLDHNYIESMNEMCKKINAK----EKLIGWYHSGPKL 99 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 306,755,136 Number of extensions: 7058667 Number of successful extensions: 19597 Number of sequences better than 10.0: 53 Number of HSP's gapped: 19483 Number of HSP's successfully gapped: 60 Length of query: 582 Length of database: 100,686,439 Length adjustment: 119 Effective length of query: 463 Effective length of database: 68,045,334 Effective search space: 31504989642 Effective search space used: 31504989642 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
